28S ribosomal protein S7

Overview
Name28S ribosomal protein S7
Smed IDSMED30011508
Length (bp)818
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 28S ribosomal protein S7 (SMED30011508) t-SNE clustered cells

Violin plots show distribution of expression levels for 28S ribosomal protein S7 (SMED30011508) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 28S ribosomal protein S7 (SMED30011508) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 28S ribosomal protein S7 (SMED30011508) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30011508

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30011508SMESG000000047.1 SmedASXL_005000SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30011508SMESG000000047.1 dd_Smed_v4_5513_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Human
Match: MRPS7 (mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499])

HSP 1 Score: 77.7962 bits (190), Expect = 4.894e-17
Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFA---LSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M+  G + + R +M +T+  +K  Q  K+  A  +  +  I+ +  +I  + L+NC P I +    KGG  YQVPV +  +   + +  K+++   E RDK  +       LS + + A +N+GP +++K DL+K+ + +RA AH R
Sbjct:    3 PVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEE-QATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPL-PDRRRRFLAMKWMI--TECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHYR 154
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Human
Match: MRPS7 (mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499])

HSP 1 Score: 77.7962 bits (190), Expect = 5.837e-17
Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFA---LSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M+  G + + R +M +T+  +K  Q  K+  A  +  +  I+ +  +I  + L+NC P I +    KGG  YQVPV +  +   + +  K+++   E RDK  +       LS + + A +N+GP +++K DL+K+ + +RA AH R
Sbjct:   19 PVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEE-QATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPL-PDRRRRFLAMKWMI--TECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHYR 170
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Human
Match: MRPS7 (mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499])

HSP 1 Score: 77.411 bits (189), Expect = 3.074e-16
Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFA---LSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M+  G + + R +M +T+  +K  Q  K+  A  +  +  I+ +  +I  + L+NC P I +    KGG  YQVPV +  +   + +  K+++   E RDK  +       LS + + A +N+GP +++K DL+K+ + +RA AH R
Sbjct:   89 PVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEE-QATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPL-PDRRRRFLAMKWMI--TECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHYR 240
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Human
Match: MRPS7 (mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499])

HSP 1 Score: 77.7962 bits (190), Expect = 3.316e-16
Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFA---LSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M+  G + + R +M +T+  +K  Q  K+  A  +  +  I+ +  +I  + L+NC P I +    KGG  YQVPV +  +   + +  K+++   E RDK  +       LS + + A +N+GP +++K DL+K+ + +RA AH R
Sbjct:  118 PVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEE-QATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPL-PDRRRRFLAMKWMI--TECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHYR 269
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Human
Match: MRPS7 (mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499])

HSP 1 Score: 48.1358 bits (113), Expect = 2.641e-6
Identity = 29/96 (30.21%), Postives = 49/96 (51.04%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHM 542
            P+I+KF   M+  G + + R +M +T+  +K  Q  K+  A  +  +  I+ +  +I  + L+NC P I +    KGG  YQV      E+ + HM
Sbjct:   89 PVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEE-QATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVNEWPGQESRALHM 183
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Celegans
Match: mrps-7 (28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11])

HSP 1 Score: 77.7962 bits (190), Expect = 5.456e-17
Identity = 48/165 (29.09%), Postives = 87/165 (52.73%), Query Frame = 3 
Query:  243 SNYTPI------ITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFA--LSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            S+ TP+      I K +    + G++E  R+ +   +  IK  Q   W  A  +  +  I+LD   + +KG++NC P + ++   +GG  YQVP  ++ E E++    K + +    R K     F   L+ E ++A+ NEG +++ K++L+K C+ +RA+AH R
Sbjct:   59 SDATPVFYRDHVIDKLIRVCTKDGEKETSRKNVLSALEIIKRRQYKAWAKASEEE-KKSIELDPFLVAKKGIKNCHPLMKLQGVTRGGTTYQVPFPIE-EPEAEFRAMKMMRDICRVRSKHGETHFKDILATELLAASQNEGSTIQAKQELHKTCEANRAYAHYR 221
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Fly
Match: mRpS7 (gene:FBgn0032236 transcript:FBtr0080007)

HSP 1 Score: 89.3521 bits (220), Expect = 4.450e-21
Identity = 55/206 (26.70%), Postives = 111/206 (53.88%), Query Frame = 3 
Query:  105 IFNIFRQYKNKNSLTPVF-LNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIRQS 719
            I   ++Q + KN L+ ++ +     +N+    ++      +  KH + NY   ITK       +G   + R ++ KT+  IK  Q      A+ ++    I+ +  +++++ +ENC P + +   ++GGV YQVPV + T+  S  +  K++LE+   +++ + +   L+ E + AA+ +G  +++K DL++LC+ +RA+AH R S
Sbjct:   31 IVQKYKQLEQKNDLSKLYHVPIKAAVNKSSDTIFH-----DDTKHKMINY---ITK-------KGNSALARTLLSKTLELIKRTQTEHMNLAKGEK--TTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTK-RSYFLAMKWLLEAAREKERKVSLPEKLAWEILDAAHGQGRVIKRKDDLHRLCESNRAYAHYRWS 218
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Fly
Match: mRpS7 (gene:FBgn0032236 transcript:FBtr0332194)

HSP 1 Score: 89.3521 bits (220), Expect = 4.450e-21
Identity = 55/206 (26.70%), Postives = 111/206 (53.88%), Query Frame = 3 
Query:  105 IFNIFRQYKNKNSLTPVF-LNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIRQS 719
            I   ++Q + KN L+ ++ +     +N+    ++      +  KH + NY   ITK       +G   + R ++ KT+  IK  Q      A+ ++    I+ +  +++++ +ENC P + +   ++GGV YQVPV + T+  S  +  K++LE+   +++ + +   L+ E + AA+ +G  +++K DL++LC+ +RA+AH R S
Sbjct:   31 IVQKYKQLEQKNDLSKLYHVPIKAAVNKSSDTIFH-----DDTKHKMINY---ITK-------KGNSALARTLLSKTLELIKRTQTEHMNLAKGEK--TTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTK-RSYFLAMKWLLEAAREKERKVSLPEKLAWEILDAAHGQGRVIKRKDDLHRLCESNRAYAHYRWS 218
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Zebrafish
Match: mrps7 (mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:619204])

HSP 1 Score: 97.4413 bits (241), Expect = 6.255e-24
Identity = 54/154 (35.06%), Postives = 91/154 (59.09%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKF-ILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF+  M+  G + + R +M +T+  IK  Q+ K+  +   R R EI+ +  +I  + +ENC P I +   +KGG  YQVPV + T+N  + M  K+ I E   N+     ++  LS+E ++A  NEG  +++K DL+K+ + +RA+AH R
Sbjct:   75 PLISKFINMMMYDGNKVLARGIMTQTLETIKRKQVEKYHKSPAAR-REEIECNPYAIFHQAMENCKPVIGLASIQKGGKFYQVPVPL-TDNRRRFMAMKWMITECRTNKQGRTLMYEKLSQELLAAFANEGNVIKRKHDLHKMAEANRAYAHYR 226
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Xenopus
Match: ubqln4 (ubiquilin 4 [Source:Xenbase;Acc:XB-GENE-922982])

HSP 1 Score: 80.8777 bits (198), Expect = 2.244e-17
Identity = 46/152 (30.26%), Postives = 85/152 (55.92%), Query Frame = 3 
Query:  261 ITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            ++KF   M++ G + +   +M +T+ +IK  QL K+  A  +  R  I+ +  +I  + L NC P I +    +GG  YQVP  ++ EN  + +  K+++ E  E++ +   ++  LS+  + A   +G  V+KK +L+K+ + +RAFAH R
Sbjct:  118 VSKFTNMMMKGGNKVLACSIMNQTLEQIKRTQLEKYYKAPEEE-RASIECNPYTIFHQALHNCQPIIGLTSVLRGGKSYQVPTPLK-ENRRRFLAMKWLITECREHKHRRTLMYEKLSQAILDAYEGQGEVVKKKHELHKMAEANRAFAHFR 267
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Xenopus
Match: ubqln4 (ubiquilin 4 [Source:Xenbase;Acc:XB-GENE-922982])

HSP 1 Score: 80.1073 bits (196), Expect = 2.496e-17
Identity = 46/152 (30.26%), Postives = 85/152 (55.92%), Query Frame = 3 
Query:  261 ITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            ++KF   M++ G + +   +M +T+ +IK  QL K+  A  +  R  I+ +  +I  + L NC P I +    +GG  YQVP  ++ EN  + +  K+++ E  E++ +   ++  LS+  + A   +G  V+KK +L+K+ + +RAFAH R
Sbjct:   73 VSKFTNMMMKGGNKVLACSIMNQTLEQIKRTQLEKYYKAPEEE-RASIECNPYTIFHQALHNCQPIIGLTSVLRGGKSYQVPTPLK-ENRRRFLAMKWLITECREHKHRRTLMYEKLSQAILDAYEGQGEVVKKKHELHKMAEANRAFAHFR 222
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Xenopus
Match: ubqln4 (ubiquilin 4 [Source:Xenbase;Acc:XB-GENE-922982])

HSP 1 Score: 80.8777 bits (198), Expect = 3.815e-17
Identity = 46/152 (30.26%), Postives = 85/152 (55.92%), Query Frame = 3 
Query:  261 ITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            ++KF   M++ G + +   +M +T+ +IK  QL K+  A  +  R  I+ +  +I  + L NC P I +    +GG  YQVP  ++ EN  + +  K+++ E  E++ +   ++  LS+  + A   +G  V+KK +L+K+ + +RAFAH R
Sbjct:  118 VSKFTNMMMKGGNKVLACSIMNQTLEQIKRTQLEKYYKAPEEE-RASIECNPYTIFHQALHNCQPIIGLTSVLRGGKSYQVPTPLK-ENRRRFLAMKWLITECREHKHRRTLMYEKLSQAILDAYEGQGEVVKKKHELHKMAEANRAFAHFR 267
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Mouse
Match: Mrps7 (mitchondrial ribosomal protein S7 [Source:MGI Symbol;Acc:MGI:1354367])

HSP 1 Score: 81.2629 bits (199), Expect = 9.738e-18
Identity = 47/154 (30.52%), Postives = 85/154 (55.19%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKF-ILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M++ G + + R +M +T+  +K  Q  K++ A  +  +  I+ +   I  + L+NC P I +    KGG  YQVPV +  +   + +  K+ I E  EN+ +   +   LS E + A +N GP +++K +++K+ + +RA AH R
Sbjct:   89 PVISKFTNMMMKGGNKVLARSLMAQTLEAVKRKQFEKYRAASAEE-QATIERNPYRIFHEALKNCEPVIGLVPILKGGHFYQVPVPL-ADRRRRFLAMKWMITECRENKPRRTLMPEKLSHELLEAFHNRGPVIKRKHNMHKMAEANRALAHYR 240
[Close]
BLAST of 28S ribosomal protein S7 vs. UniProt/SwissProt
Match: sp|Q498Z6|RT07_DANRE (28S ribosomal protein S7, mitochondrial OS=Danio rerio OX=7955 GN=mrps7 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.645e-22
Identity = 53/154 (34.42%), Postives = 91/154 (59.09%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKF-ILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF+  M+  G + + R +M +T+  IK  Q+ K+  +   + R EI+ +  +I  + +ENC P I +   +KGG  YQVPV + T+N  + M  K+ I E   N+     ++  LS+E ++A  NEG  +++K DL+K+ + +RA+AH R
Sbjct:   75 PLISKFINMMMYDGNKVLARGIMTQTLETIKRKQVEKYHKSPAAK-REEIECNPYAIFHQAMENCKPVIGLASIQKGGKFYQVPVPL-TDNRRRFMAMKWMITECRTNKQGRTLMYEKLSQELLAAFANEGNVIKRKHDLHKMAEANRAYAHYR 226
[Close]
BLAST of 28S ribosomal protein S7 vs. UniProt/SwissProt
Match: sp|Q5ZMU0|RT07_CHICK (28S ribosomal protein S7, mitochondrial OS=Gallus gallus OX=9031 GN=MRPS7 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.650e-22
Identity = 53/154 (34.42%), Postives = 90/154 (58.44%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M++ G + + R +M +T+  IK  QL K+  A  D  +  ++ +   I  + L+NC P I +    +GG  YQVPV ++ +N  + +  K+++ E  EN+ +   +   LS+E I A NNEGP ++KK  L+K+ + +RA+AH R
Sbjct:   80 PMISKFTNMMMKDGNKVLARSLMAQTLENIKRKQLEKYHRAPDDE-KERVECNPYVIFHQALKNCQPIIGLSNITRGGKTYQVPVPLK-DNRKRFLAMKWLITECRENKHRRTLMPEKLSEELIQAFNNEGPIIKKKHVLHKMAEANRAYAHFR 231
[Close]
BLAST of 28S ribosomal protein S7 vs. UniProt/SwissProt
Match: sp|Q9VKX4|RT07_DROME (28S ribosomal protein S7, mitochondrial OS=Drosophila melanogaster OX=7227 GN=mRpS7 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.461e-20
Identity = 55/206 (26.70%), Postives = 111/206 (53.88%), Query Frame = 3 
Query:  105 IFNIFRQYKNKNSLTPVF-LNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIRQS 719
            I   ++Q + KN L+ ++ +     +N+    ++      +  KH + NY   ITK       +G   + R ++ KT+  IK  Q      A+ ++    I+ +  +++++ +ENC P + +   ++GGV YQVPV + T+  S  +  K++LE+   +++ + +   L+ E + AA+ +G  +++K DL++LC+ +RA+AH R S
Sbjct:   31 IVQKYKQLEQKNDLSKLYHVPIKAAVNKSSDTIFH-----DDTKHKMINY---ITK-------KGNSALARTLLSKTLELIKRTQTEHMNLAKGEK--TTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTK-RSYFLAMKWLLEAAREKERKVSLPEKLAWEILDAAHGQGRVIKRKDDLHRLCESNRAYAHYRWS 218
[Close]
BLAST of 28S ribosomal protein S7 vs. UniProt/SwissProt
Match: sp|Q6DDY9|RT07_XENLA (28S ribosomal protein S7, mitochondrial OS=Xenopus laevis OX=8355 GN=mrps7 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.750e-20
Identity = 60/203 (29.56%), Postives = 108/203 (53.20%), Query Frame = 3 
Query:  123 QYKNKNSLTPVFLNSGETLNEFD--QRLYSIVNPPEKVKHNLSNYT---PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            QY +  +   V+    E L+E +  +R   IV P +    N+++     P I+KF   M++ G + + R +M +T+ +IK  QL K+  A  +  R  I+ +  +I  + L NC P I +    +GG  YQVP  ++ EN  + +  K+++ E  +N+ +   ++  LS+  + A   +G  V+KK +L+K+ + +RAFAH R
Sbjct:   31 QYLDPETDKQVYSRPLEELSEQERTERELKIVRPIKAAPSNVTSSVFSDPTISKFTNMMMKGGNKNLSRSIMNQTLEQIKRTQLEKYYKAPEEE-RASIECNPYTIFHQALHNCQPIIGLTSILRGGKSYQVPTPLK-ENRRRFLAMKWLITECRDNKHRRTLMYEKLSQALLDAYQMQGEVVKKKHELHKMAEANRAFAHFR 231
[Close]
BLAST of 28S ribosomal protein S7 vs. UniProt/SwissProt
Match: sp|Q3T040|RT07_BOVIN (28S ribosomal protein S7, mitochondrial OS=Bos taurus OX=9913 GN=MRPS7 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.786e-17
Identity = 47/154 (30.52%), Postives = 85/154 (55.19%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKF-ILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF   M++ G + + R +M +T+  +K  Q  K+  A  +  +  ++ +  +I  + L+NC P I +    KGG  YQVPV +  E   + +  K+ I E  E + + + +   LS+E + A  N GP +++K D++K+ + +RA AH R
Sbjct:   89 PVISKFTNMMMKGGNKILARSLMTQTLEAVKRKQFEKYHAASAEE-QATVERNPYTIFHQALKNCEPVIGLVPILKGGHFYQVPVPL-AERRRRFLAMKWMITECREKKPRRMLMPEKLSQELLEAFCNRGPVIKRKHDMHKMAEANRALAHYR 240
[Close]
BLAST of 28S ribosomal protein S7 vs. TrEMBL
Match: U6JB77 (28S ribosomal protein S7 OS=Echinococcus granulosus OX=6210 GN=EGR_02352 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.679e-44
Identity = 83/194 (42.78%), Postives = 121/194 (62.37%), Query Frame = 3 
Query:  141 SLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWK---NAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            +L P  L      +  D  LY  V P  K +H+  N+ P++ K M  M+  G RE VREVM+KT AEIK IQ++K K    AE+D     +++    I+ + + NCSP +++   R+GG IY+VP   Q E  S+HM  ++ILES  N+DK+ RIW +L+ E I+AANNEG ++ KKK+L K C+E+RA+A+ R
Sbjct:   31 ALEPKILPPDTQFDINDPLLYKTVEPISKWRHSSKNWDPVVAKIMGMMLYDGDRETVREVMRKTFAEIKFIQMAKRKRLVGAESD----AVEVSPIKIVNEAVTNCSPLLVLHSVRRGGFIYKVPAPPQNETVSRHMAIRWILESARNKDKNQRIWVSLAHELINAANNEGTAIGKKKELLKQCEENRAYANYR 220
[Close]
BLAST of 28S ribosomal protein S7 vs. TrEMBL
Match: A0A068XX92 (28S ribosomal protein S7 mitochondrial OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000424500 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.535e-43
Identity = 80/191 (41.88%), Postives = 120/191 (62.83%), Query Frame = 3 
Query:  141 SLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            +L P  L      +  D  LY  V P  K +H+  N+ P++ K M  M+  G RE VREVM+KT AEIK IQ++K K    +   + ++++   I+ + + NCSP +++   R+GG IY+VP   Q E  S+HM  ++ILES  N+DK+ RIW +L+ E I+AANNEG ++ KKK+L K C+E+RA+A+ R
Sbjct:   31 ALEPKILPPDTQFDINDPLLYKTVEPISKWRHSSKNWDPVVAKVMGMMLYDGDRETVREVMRKTFAEIKFIQMAKRKRMVGEE-SDAVEVNPIKIVNEAVTNCSPLLVLHSVRRGGFIYKVPAPPQNETVSRHMAIRWILESARNKDKNQRIWVSLAHELINAANNEGTAIGKKKELSKQCEENRAYANYR 220
[Close]
BLAST of 28S ribosomal protein S7 vs. TrEMBL
Match: A0A0X3NPD6 (28S ribosomal protein S7 (Fragment) OS=Schistocephalus solidus OX=70667 GN=RT07 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.666e-43
Identity = 78/198 (39.39%), Postives = 126/198 (63.64%), Query Frame = 3 
Query:  120 RQYKNKNSLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            R+ K   +L P  ++  E ++  D  LY  V P  K  H+  N+ P+++K +  ++  G+RE  REVM+KT AEIK +QL+K K+A  D  R   + +   II K + NC P +++   R+GG IY+VP   + E+E++H+  ++ILES  N+ K+ RIW +L++E ++A+ NEG +V KKK+L K C+E+RA+A+ R
Sbjct:   55 REKKYHYALQPKIIDKNEAIDANDPLLYKTVEPISKWSHSGHNWDPVVSKLIGSLLYDGERETAREVMRKTFAEIKFMQLAKLKSASADE-REHFEANPIVIINKAVSNCLPVLILHSVRRGGFIYKVPAPPRGESEARHIAIRWILESANNKPKNQRIWVSLARELVAASKNEGSAVGKKKELTKQCEENRAYANYR 251
[Close]
BLAST of 28S ribosomal protein S7 vs. TrEMBL
Match: A0A0R3VSP0 (Tr-type G domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS193 PE=4 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.412e-41
Identity = 85/209 (40.67%), Postives = 127/209 (60.77%), Query Frame = 3 
Query:  105 IFNIFRQYKNKN---SLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKN---AETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            I N  +Q + K    +L P  L  G  ++  D  LY  V P  K +H+  N+ PI+ K    M+  G+RE  REVM+KT AEIK IQ++K K    AE D     +++    I+ + + NCSP +++   R+GG IY+VP   Q E  S+H+  ++ILES  N+DK+ RIW +L+ E I+AANNEG ++ KK++L K C+E+RA+A+ R
Sbjct:   16 ICNFSQQIRGKKYHYALEPKLLPPGTQIDINDPLLYKTVEPISKWRHSSKNWDPIVAKMTGMMLYDGERETAREVMRKTFAEIKFIQMAKRKKLAGAEAD----AVEVSPIKIVNQAVANCSPLLVLHSIRRGGFIYKVPAPPQNEAVSRHIAIRWILESARNKDKNKRIWVSLAHELINAANNEGTAIGKKRELTKQCEENRAYANYR 220
[Close]
BLAST of 28S ribosomal protein S7 vs. TrEMBL
Match: A0A4E0S012 (28S ribosomal protein S7 mitochondrial OS=Fasciola hepatica OX=6192 GN=D915_000651 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.057e-41
Identity = 70/191 (36.65%), Postives = 126/191 (65.97%), Query Frame = 3 
Query:  141 SLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            +L P  L   ET+   ++RLY  V P +K +H+ +N+ P++++ +  + +RG+RE  REVM+ T  EIK IQL K+K A T+  + ++ L+   II   ++NC+P +++    +GG++Y+VP   +T++ + HM  KF++++  ++  D RIW +L++E I+A+ N+G + RKK++L K C+E+RA+A  R
Sbjct:   29 ALEPKLLAPKETVEPTEERLYKPVAPADKWEHSGTNHDPLVSRMIGMITERGERETAREVMRLTFREIKLIQLQKFK-AATEEEKKDLILNPTQIIHDAVKNCTPILVLHSVVRGGMLYKVPAPPRTDSVATHMAIKFVIDAARDKPPDTRIWASLARELIAASQNQGKAFRKKQELIKQCEENRAYATYR 218
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Cavefish
Match: mrps7 (mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:103044712])

HSP 1 Score: 90.1225 bits (222), Expect = 2.657e-21
Identity = 50/154 (32.47%), Postives = 91/154 (59.09%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF+  ++Q G + +  E++ +T+  IK  Q+ K+  A     R  I+ +  +I  + LENC P I +   +KG   YQVP+ + TE   + +  K+I+ E  +N+ +   ++  LS+E +SA  NEG  +++K +L+K+ + +RA+AH R
Sbjct:   76 PVISKFINMIMQDGNKVLSTEIVTQTLEAIKRRQVEKYHKAPAAE-REAIECNPYTIFHQALENCKPVIGLANIQKGSRTYQVPIPL-TEKRRRFLAMKWIITECRDNKHRRTHMYEKLSQELLSAFANEGNVIKRKHELHKMAEANRAYAHFR 227
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Sea Lamprey
Match: mrps7 (mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:619204])

HSP 1 Score: 83.9593 bits (206), Expect = 1.082e-19
Identity = 51/157 (32.48%), Postives = 91/157 (57.96%), Query Frame = 3 
Query:  249 YTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQL-SKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFIL-ESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            Y   ++KF+  +++ G + + R +MQ+T+  IK  QL + +K  E +R  + I+ +  +I    +ENC P I +   +KGG  YQVP  ++ +N  + +  K+++ E  EN+ +   +   LS E + A  NEG  +R+K DL+++ + +RAFAH R
Sbjct:   76 YDDTVSKFINMLMKGGNKVLARSIMQETLELIKRKQLETYYKTPEPER--DAIECNPYTIFHTAMENCKPVIGLVTVKKGGKNYQVPTPLK-DNRRRFLAMKWLITECRENKARRSLMQQRLSVEVLRAFTNEGNVIRRKHDLHRMAEGNRAFAHYR 229
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Sea Lamprey
Match: mrps7 (mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:619204])

HSP 1 Score: 55.8398 bits (133), Expect = 8.288e-10
Identity = 40/155 (25.81%), Postives = 76/155 (49.03%), Query Frame = 3 
Query:  249 YTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            Y   ++KF+  +++ G   + R +MQ+T+  IK  Q + +K  E +R    I+ +  +I    +ENC   I +   +KGG  YQ P  ++ +N  + +  + +  +     + +R           A  NEG  +++K DL+ + + +RAF H R
Sbjct:   66 YDDTVSKFINMLMKGGDEVLARSIMQETLELIKRKQETYYKTPEPERA--AIECNPYTIFHTAMENCK-VIGLVTVQKGGKNYQAPTPLK-DNRWRFLALRGVPRAQGCPWRCLR-----------AFTNEGNDIKRKHDLHHMAEGNRAFVHYR 205
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Nematostella
Match: EDO32653 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUI0])

HSP 1 Score: 71.2478 bits (173), Expect = 1.665e-15
Identity = 45/146 (30.82%), Postives = 78/146 (53.42%), Query Frame = 3 
Query:  282 MVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRD--KDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            M+  GK+ + + +  + + EIK  QL K +++        I  D   I  + +EN  P +     RK G ++QVP  +      +    K+I+++  ++   K+ R+   L+KE + A NNEG ++RKK+DL+K  + +RAFAH R
Sbjct:    1 MMWDGKKSLSQNIFTQAMQEIKKQQLEKQRSSSEP---ESITTDPTEIFHQAIENVKPVVGCIPLRKAGKVFQVPSPL-NPIRRRFFAIKWIIDAARDQSGPKNARMHKKLAKELLDAYNNEGTAIRKKQDLHKRAEANRAFAHYR 142
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Medaka
Match: mrps7 (mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:101168464])

HSP 1 Score: 89.7373 bits (221), Expect = 4.591e-21
Identity = 48/154 (31.17%), Postives = 92/154 (59.74%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKF-ILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF+  ++  G + + RE++ +T+  IK  Q+ K+  +   + + EI+ +  +I    LENC P + +   +KGG  YQVP+ + T+N  + +  K+ I E  EN+ +   ++  LS+E ++A   EG  ++K+ +L+K+ + +RA+AH R
Sbjct:   87 PLISKFVRMIMTDGNKVLAREIITQTLENIKRKQVEKYHKSPAGK-KEEIECNPYTIFHTALENCKPVVGLASIQKGGKSYQVPIPL-TDNRRRFLAMKWMITECRENKHRRTHMYEKLSQELLAAFEKEGNVIKKRHELHKMAEANRAYAHYR 238
[Close]
BLAST of 28S ribosomal protein S7 vs. Ensembl Medaka
Match: mrps7 (mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:101168464])

HSP 1 Score: 89.7373 bits (221), Expect = 4.684e-21
Identity = 48/154 (31.17%), Postives = 92/154 (59.74%), Query Frame = 3 
Query:  255 PIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKF-ILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIR 713
            P+I+KF+  ++  G + + RE++ +T+  IK  Q+ K+  +   + + EI+ +  +I    LENC P + +   +KGG  YQVP+ + T+N  + +  K+ I E  EN+ +   ++  LS+E ++A   EG  ++K+ +L+K+ + +RA+AH R
Sbjct:   80 PLISKFVRMIMTDGNKVLAREIITQTLENIKRKQVEKYHKSPAGK-KEEIECNPYTIFHTALENCKPVVGLASIQKGGKSYQVPIPL-TDNRRRFLAMKWMITECRENKHRRTHMYEKLSQELLAAFEKEGNVIKKRHELHKMAEANRAYAHYR 231
[Close]
BLAST of 28S ribosomal protein S7 vs. Planmine SMEST
Match: SMESG000000047.1 (SMESG000000047.1)

HSP 1 Score: 447.973 bits (1151), Expect = 9.112e-162
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 3 
Query:   78 MSLLKKSSIIFNIFRQYKNKNSLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIRQSKSQG 731
            MSLLKKSSIIFNIFRQYKNKNSLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIR EIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIRQSKSQG
Sbjct:    1 MSLLKKSSIIFNIFRQYKNKNSLTPVFLNSGETLNEFDQRLYSIVNPPEKVKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNAETDRIRTEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTENESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYKLCDEHRAFAHIRQSKSQG 218
The following BLAST results are available for this feature:
BLAST of 28S ribosomal protein S7 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MRPS74.894e-1730.77mitochondrial ribosomal protein S7 [Source:HGNC Sy... [more]
MRPS75.837e-1730.77mitochondrial ribosomal protein S7 [Source:HGNC Sy... [more]
MRPS73.074e-1630.77mitochondrial ribosomal protein S7 [Source:HGNC Sy... [more]
MRPS73.316e-1630.77mitochondrial ribosomal protein S7 [Source:HGNC Sy... [more]
MRPS72.641e-630.21mitochondrial ribosomal protein S7 [Source:HGNC Sy... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrps-75.456e-1729.0928S ribosomal protein S7, mitochondrial [Source:U... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mRpS74.450e-2126.70gene:FBgn0032236 transcript:FBtr0080007[more]
mRpS74.450e-2126.70gene:FBgn0032236 transcript:FBtr0332194[more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrps76.255e-2435.06mitochondrial ribosomal protein S7 [Source:NCBI ge... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ubqln42.244e-1730.26ubiquilin 4 [Source:Xenbase;Acc:XB-GENE-922982][more]
ubqln42.496e-1730.26ubiquilin 4 [Source:Xenbase;Acc:XB-GENE-922982][more]
ubqln43.815e-1730.26ubiquilin 4 [Source:Xenbase;Acc:XB-GENE-922982][more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Mrps79.738e-1830.52mitchondrial ribosomal protein S7 [Source:MGI Symb... [more]
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BLAST of 28S ribosomal protein S7 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q498Z6|RT07_DANRE1.645e-2234.4228S ribosomal protein S7, mitochondrial OS=Danio r... [more]
sp|Q5ZMU0|RT07_CHICK8.650e-2234.4228S ribosomal protein S7, mitochondrial OS=Gallus ... [more]
sp|Q9VKX4|RT07_DROME4.461e-2026.7028S ribosomal protein S7, mitochondrial OS=Drosoph... [more]
sp|Q6DDY9|RT07_XENLA4.750e-2029.5628S ribosomal protein S7, mitochondrial OS=Xenopus... [more]
sp|Q3T040|RT07_BOVIN3.786e-1730.5228S ribosomal protein S7, mitochondrial OS=Bos tau... [more]
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BLAST of 28S ribosomal protein S7 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
U6JB772.679e-4442.7828S ribosomal protein S7 OS=Echinococcus granulosu... [more]
A0A068XX921.535e-4341.8828S ribosomal protein S7 mitochondrial OS=Echinoco... [more]
A0A0X3NPD61.666e-4339.3928S ribosomal protein S7 (Fragment) OS=Schistoceph... [more]
A0A0R3VSP02.412e-4140.67Tr-type G domain-containing protein OS=Taenia asia... [more]
A0A4E0S0123.057e-4136.6528S ribosomal protein S7 mitochondrial OS=Fasciola... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mrps72.657e-2132.47mitochondrial ribosomal protein S7 [Source:NCBI ge... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mrps71.082e-1932.48mitochondrial ribosomal protein S7 [Source:NCBI ge... [more]
mrps78.288e-1025.81mitochondrial ribosomal protein S7 [Source:NCBI ge... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 28S ribosomal protein S7 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO326531.665e-1530.82Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 28S ribosomal protein S7 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mrps74.591e-2131.17mitochondrial ribosomal protein S7 [Source:NCBI ge... [more]
mrps74.684e-2131.17mitochondrial ribosomal protein S7 [Source:NCBI ge... [more]
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BLAST of 28S ribosomal protein S7 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000000047.19.112e-16299.54SMESG000000047.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011508 ID=SMED30011508|Name=28S ribosomal protein S7|organism=Schmidtea mediterranea sexual|type=transcript|length=818bp
TTAATTTATTACAAATTTGTTAATCTATCTTGTATTGTATCACGTAATAT
TTAACACAATAAATTAAAAGATTTTAAATGAGTTTATTGAAAAAATCTTC
AATAATTTTCAACATATTCCGACAATATAAAAATAAAAATTCATTAACTC
CTGTCTTTCTAAATTCCGGCGAGACTCTGAATGAATTTGATCAACGCTTG
TATAGCATTGTCAATCCACCAGAAAAAGTAAAACATAATCTAAGCAATTA
TACGCCAATAATTACAAAATTTATGGCTCGTATGGTGCAAAGAGGTAAAA
GGGAAGTTGTCAGAGAAGTTATGCAAAAGACAATAGCAGAAATAAAACAC
ATTCAACTAAGTAAATGGAAAAACGCAGAAACTGATCGAATAAGAAATGA
AATTGATTTAGATTTTAGGTCAATTATTGAAAAGGGTTTGGAAAATTGTT
CCCCGAAAATAATGATCAAAGAATACCGCAAAGGCGGAGTCATCTATCAA
GTCCCAGTTAAAGTTCAAACAGAAAATGAGTCCCAACATATGGGCTCAAA
ATTTATTCTAGAATCTGTTGAAAACAGAGATAAAGATATACGAATTTGGT
TTGCATTGTCCAAAGAATTTATCAGTGCCGCTAATAATGAAGGGCCTTCC
GTACGAAAAAAGAAAGATTTGTATAAACTGTGCGACGAGCATCGAGCATT
TGCACATATTCGACAGTCGAAATCCCAAGGAAATTGAAATGCATTTTGAG
AAATAATAAATATTTTTCGTCGATGTATTTTTTTCTATGATTTATTAATT
TATTTGTAAAAATTCAGA
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protein sequence of SMED30011508-orf-1

>SMED30011508-orf-1 ID=SMED30011508-orf-1|Name=SMED30011508-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=220bp
MSLLKKSSIIFNIFRQYKNKNSLTPVFLNSGETLNEFDQRLYSIVNPPEK
VKHNLSNYTPIITKFMARMVQRGKREVVREVMQKTIAEIKHIQLSKWKNA
ETDRIRNEIDLDFRSIIEKGLENCSPKIMIKEYRKGGVIYQVPVKVQTEN
ESQHMGSKFILESVENRDKDIRIWFALSKEFISAANNEGPSVRKKKDLYK
LCDEHRAFAHIRQSKSQGN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR036823Ribosomal_S7_dom_sf
IPR000235Ribosomal_S5/S7
IPR023798Ribosomal_S7_dom
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
Vocabulary: biological process
TermDefinition
GO:0006412translation
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036823Ribosomal protein S7 domain superfamilyGENE3DG3DSA:1.10.455.10coord: 45..212
e-value: 2.5E-33
score: 116.9
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILYSSF47973Ribosomal protein S7coord: 58..209
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 6..214
e-value: 4.4E-26
score: 89.6
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 50..212
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 52..205
e-value: 8.4E-23
score: 80.7
NoneNo IPR availablePANTHERPTHR11205:SF1928S RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 50..212