GGACT domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30011479 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 48
Homology
BLAST of GGACT domain-containing protein vs. Ensembl Human
Match: GGACT (gamma-glutamylamine cyclotransferase [Source:HGNC Symbol;Acc:HGNC:25100]) HSP 1 Score: 76.6406 bits (187), Expect = 3.094e-16 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAE--------SDENP-KTEYLCYTYXXXXXXXXXXXXXXXDDYSSK-VHG 490 + +F YGTLK + N H + + F A G E YPLV+ N+P+LL + G G+ V+GE++ + D + L F DDFE CP Y+R + + ++E P T C+ Y F PE LP D Y S+ HG Sbjct: 2 ALVFVYGTLKRGQPN-HRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLVEGEVYAV-DERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRATFPPEWAQLPHHDSYDSEGPHG 144
BLAST of GGACT domain-containing protein vs. Ensembl Human
Match: GGACT (gamma-glutamylamine cyclotransferase [Source:HGNC Symbol;Acc:HGNC:25100]) HSP 1 Score: 76.6406 bits (187), Expect = 3.094e-16 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAE--------SDENP-KTEYLCYTYXXXXXXXXXXXXXXXDDYSSK-VHG 490 + +F YGTLK + N H + + F A G E YPLV+ N+P+LL + G G+ V+GE++ + D + L F DDFE CP Y+R + + ++E P T C+ Y F PE LP D Y S+ HG Sbjct: 2 ALVFVYGTLKRGQPN-HRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLVEGEVYAV-DERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRATFPPEWAQLPHHDSYDSEGPHG 144
BLAST of GGACT domain-containing protein vs. Ensembl Celegans
Match: F42A10.9 (pep chromosome:WBcel235:III:6164645:6171165:1 gene:WBGene00023489.1 transcript:F42A10.9.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F42A10.9) HSP 1 Score: 75.0998 bits (183), Expect = 4.230e-16 Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERK 361 +F YGTLK+ E N+ +S+ E +F+++G EK+PLVVG++ N+PFLLD G G N++GE++++ + K L D+ E P Y+RK Sbjct: 7 VFVYGTLKTGEPNYKVLSE--TDGEYRFISSGTTVEKFPLVVGTKYNIPFLLDDAGNGNNIEGEMYEVCEKK-LKVLDELEAYPTLYDRK 93
BLAST of GGACT domain-containing protein vs. Ensembl Fly
Match: CG2811 (gene:FBgn0035082 transcript:FBtr0072412) HSP 1 Score: 74.7146 bits (182), Expect = 6.905e-16 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 83 TSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER--KLCLAESDE 385 + +F YGTLK E N H+++K E + +F+ G K+PLVVG+R N+PFLL G G +++GE++++ D L D ED P YY+R + L E +E Sbjct: 8 AARVFVYGTLKRGEPNHHWLTK-KENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPGEGNHIEGEVYEV-DETMLSKLDILEDYPDYYDREQQTILMEQNE 108
BLAST of GGACT domain-containing protein vs. Ensembl Fly
Match: CG2811 (gene:FBgn0035082 transcript:FBtr0345515) HSP 1 Score: 74.3294 bits (181), Expect = 9.044e-16 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 83 TSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER--KLCLAESDE 385 + +F YGTLK E N H+++K E + +F+ G K+PLVVG+R N+PFLL G G +++GE++++ D L D ED P YY+R + L E +E Sbjct: 2 AARVFVYGTLKRGEPNHHWLTK-KENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPGEGNHIEGEVYEV-DETMLSKLDILEDYPDYYDREQQTILMEQNE 102
BLAST of GGACT domain-containing protein vs. Ensembl Fly
Match: CG2811 (gene:FBgn0035082 transcript:FBtr0309243) HSP 1 Score: 74.3294 bits (181), Expect = 1.102e-15 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 83 TSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER--KLCLAESDE 385 + +F YGTLK E N H+++K E + +F+ G K+PLVVG+R N+PFLL G G +++GE++++ D L D ED P YY+R + L E +E Sbjct: 8 AARVFVYGTLKRGEPNHHWLTK-KENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPGEGNHIEGEVYEV-DETMLSKLDILEDYPDYYDREQQTILMEQNE 108
BLAST of GGACT domain-containing protein vs. Ensembl Fly
Match: Tina-1 (gene:FBgn0035083 transcript:FBtr0072411) HSP 1 Score: 56.225 bits (134), Expect = 2.846e-9 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKL 364 S LF YG LK + + ++ KF +K PLV+ +R N+PFLL+ G+G V GEI++++D + L D+ EDC Y R++ Sbjct: 12 SKLFVYGALKYGQPSNSILASSGN-GFAKFWCKATTTQKLPLVIATRYNIPFLLNKPGVGYYVTGEIYEVDD-RMLNSLDNLEDCEEIYTREM 102
BLAST of GGACT domain-containing protein vs. Ensembl Zebrafish
Match: ggact.2 (gamma-glutamylamine cyclotransferase, tandem duplicate 2 [Source:NCBI gene;Acc:447805]) HSP 1 Score: 76.2554 bits (186), Expect = 6.211e-16 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 89 FLFFYGTLKSTELN-FHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAE 376 +F YGTLK + N F I + +F+ E YPLV+ CN+PFLL++ G G+ V GEI+ + D K L F D FE+CP +Y+R L E Sbjct: 3 LVFVYGTLKKGQPNYFRLIDS--SNGQAEFITCARTVEPYPLVITGECNIPFLLNVPGSGQRVYGEIYSV-DQKMLEFLDWFEECPDWYQRTLIQLE 96
BLAST of GGACT domain-containing protein vs. Ensembl Zebrafish
Match: ggact.3 (gamma-glutamylamine cyclotransferase, tandem duplicate 3 [Source:NCBI gene;Acc:100038780]) HSP 1 Score: 75.0998 bits (183), Expect = 7.107e-16 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 77 FQTSFLFFYGTLKSTELNFHFISKFLEIN--ELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 T +F YG+LK + N H + L N + +F+ E YPLV+ ++ N+PFLL++ G GK V GEI+ + D K L F D FE CP +Y+R Sbjct: 1 MSTHHVFVYGSLKKGQPNHH---ELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNVPGSGKQVSGEIYSV-DQKMLEFLDWFEKCPDWYQR 92
BLAST of GGACT domain-containing protein vs. Ensembl Zebrafish
Match: ggact.3 (gamma-glutamylamine cyclotransferase, tandem duplicate 3 [Source:NCBI gene;Acc:100038780]) HSP 1 Score: 75.0998 bits (183), Expect = 7.107e-16 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 77 FQTSFLFFYGTLKSTELNFHFISKFLEIN--ELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 T +F YG+LK + N H + L N + +F+ E YPLV+ ++ N+PFLL++ G GK V GEI+ + D K L F D FE CP +Y+R Sbjct: 1 MSTHHVFVYGSLKKGQPNHH---ELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNVPGSGKQVSGEIYSV-DQKMLEFLDWFEKCPDWYQR 92
BLAST of GGACT domain-containing protein vs. Ensembl Zebrafish
Match: ggact.3 (gamma-glutamylamine cyclotransferase, tandem duplicate 3 [Source:NCBI gene;Acc:100038780]) HSP 1 Score: 75.0998 bits (183), Expect = 7.107e-16 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 77 FQTSFLFFYGTLKSTELNFHFISKFLEIN--ELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 T +F YG+LK + N H + L N + +F+ E YPLV+ ++ N+PFLL++ G GK V GEI+ + D K L F D FE CP +Y+R Sbjct: 1 MSTHHVFVYGSLKKGQPNHH---ELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNVPGSGKQVSGEIYSV-DQKMLEFLDWFEKCPDWYQR 92
BLAST of GGACT domain-containing protein vs. Ensembl Zebrafish
Match: ggact.1 (gamma-glutamylamine cyclotransferase, tandem duplicate 1 [Source:NCBI gene;Acc:777609]) HSP 1 Score: 67.3958 bits (163), Expect = 3.577e-13 Identity = 32/89 (35.96%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 +F YGTLK + N+H ++ + +F+ + YP+V+ ++ PFLL++ G G+ V GEI+ + D L F D+FE+CP Y+R Sbjct: 23 VFVYGTLKKGQSNYHELTNTTH-GQAEFITCARTKDPYPMVIATKDKFPFLLNVPGSGQQVYGEIYNV-DQNMLDFLDEFEECPDLYQR 109
BLAST of GGACT domain-containing protein vs. Ensembl Xenopus
Match: GGACT (gamma-glutamylamine cyclotransferase [Source:NCBI gene;Acc:100379707]) HSP 1 Score: 77.0258 bits (188), Expect = 1.813e-16 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 +F YGTLK + N H + + + F G EKYPLV+ N+PFLL+I G G+ + GEI+ ++D+ L F DDFE CP +Y+R Sbjct: 7 IFVYGTLKRGQPN-HTVMTCYKHGKAVFKGMGKTVEKYPLVIAEEANIPFLLNIPGTGRRIIGEIYSVDDS-MLQFLDDFEGCPNWYQR 93
BLAST of GGACT domain-containing protein vs. Ensembl Mouse
Match: Ggact (gamma-glutamylamine cyclotransferase [Source:MGI Symbol;Acc:MGI:2385008]) HSP 1 Score: 69.707 bits (169), Expect = 2.576e-14 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER-----KLCLAESDENPKTEYLCYTY 418 + +F YGTLK + N H + F G E +PLV+ N+P+LL + G G V GEI+++ D + L F DDFEDCP Y+R ++ E D +P C+ Y Sbjct: 2 AHIFVYGTLKRGQPN-HKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYLPGKGHCVTGEIYEV-DEQMLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVY 115
BLAST of GGACT domain-containing protein vs. Ensembl Mouse
Match: Ggact (gamma-glutamylamine cyclotransferase [Source:MGI Symbol;Acc:MGI:2385008]) HSP 1 Score: 68.9366 bits (167), Expect = 1.018e-13 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER-----KLCLAESDENPKTEYLCYTY 418 + +F YGTLK + N H + F G E +PLV+ N+P+LL + G G V GEI+++ D + L F DDFEDCP Y+R ++ E D +P C+ Y Sbjct: 2 AHIFVYGTLKRGQPN-HKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYLPGKGHCVTGEIYEV-DEQMLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVY 115
BLAST of GGACT domain-containing protein vs. Ensembl Mouse
Match: Ggact (gamma-glutamylamine cyclotransferase [Source:MGI Symbol;Acc:MGI:2385008]) HSP 1 Score: 64.3142 bits (155), Expect = 1.367e-12 Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 +F YGTLK + N H + F G E +PLV+ N+P+LL + G G V GEI+++ D + L F DDFEDCP Y+R Sbjct: 4 IFVYGTLKRGQPN-HKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYLPGKGHCVTGEIYEV-DEQMLRFLDDFEDCPSMYQR 90
BLAST of GGACT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9BVM4|GGACT_HUMAN (Gamma-glutamylaminecyclotransferase OS=Homo sapiens OX=9606 GN=GGACT PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.486e-15 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAE--------SDENP-KTEYLCYTYXXXXXXXXXXXXXXXDDYSSK-VHG 490 + +F YGTLK + N H + + F A G E YPLV+ N+P+LL + G G+ V+GE++ + D + L F DDFE CP Y+R + + ++E P T C+ Y F PE LP D Y S+ HG Sbjct: 2 ALVFVYGTLKRGQPN-HRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLVEGEVYAV-DERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRATFPPEWAQLPHHDSYDSEGPHG 144
BLAST of GGACT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q66I06|GGACB_DANRE (Gamma-glutamylaminecyclotransferase B OS=Danio rerio OX=7955 GN=ggact.2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.689e-15 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 89 FLFFYGTLKSTELN-FHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAE 376 +F YGTLK + N F I + +F+ E YPLV+ CN+PFLL++ G G+ V GEI+ + D K L F D FE+CP +Y+R L E Sbjct: 3 LVFVYGTLKKGQPNYFRLIDS--SNGQAEFITCARTVEPYPLVITGECNIPFLLNVPGSGQRVYGEIYSV-DQKMLEFLDWFEECPDWYQRTLIQLE 96
BLAST of GGACT domain-containing protein vs. UniProt/SwissProt
Match: sp|A3KNL6|GGACC_DANRE (Gamma-glutamylaminecyclotransferase C OS=Danio rerio OX=7955 GN=ggact.3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.365e-15 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 77 FQTSFLFFYGTLKSTELNFHFISKFLEIN--ELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER 358 T +F YG+LK + N H + L N + +F+ E YPLV+ ++ N+PFLL++ G GK V GEI+ + D K L F D FE CP +Y+R Sbjct: 1 MSTHHVFVYGSLKKGQPNHH---ELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNVPGSGKQVSGEIYSV-DQKMLEFLDWFEKCPDWYQR 92
BLAST of GGACT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9W0Y2|YS11_DROME (Putative gamma-glutamylcyclotransferase CG2811 OS=Drosophila melanogaster OX=7227 GN=CG2811 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.922e-15 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 83 TSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER--KLCLAESDE 385 + +F YGTLK E N H+++K E + +F+ G K+PLVVG+R N+PFLL G G +++GE++++ D L D ED P YY+R + L E +E Sbjct: 8 AARVFVYGTLKRGEPNHHWLTK-KENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPGEGNHIEGEVYEV-DETMLSKLDILEDYPDYYDREQQTILMEQNE 108
BLAST of GGACT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q923B0|GGACT_MOUSE (Gamma-glutamylaminecyclotransferase OS=Mus musculus OX=10090 GN=Ggact PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.124e-13 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYER-----KLCLAESDENPKTEYLCYTY 418 + +F YGTLK + N H + F G E +PLV+ N+P+LL + G G V GEI+++ D + L F DDFEDCP Y+R ++ E D +P C+ Y Sbjct: 2 AHIFVYGTLKRGQPN-HKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYLPGKGHCVTGEIYEV-DEQMLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVY 115
BLAST of GGACT domain-containing protein vs. TrEMBL
Match: B4LL23 (Uncharacterized protein, isoform A OS=Drosophila virilis OX=7244 GN=Dvir\GJ22268 PE=4 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.947e-17 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTY 418 +F YGTLKS E N H+++ +F+A G ++PLV+G+R N+PFLLD +G+G NV+GEI++++D L D ED P YY+R+ +D+N K E C+ Y Sbjct: 11 VFVYGTLKSGEPNHHWLTTKTN-GHARFLAKGTTMIRFPLVIGTRYNIPFLLDKQGVGHNVQGEIYEVDDT-MLSNLDVLEDYPRYYDREPQTILTDQNEKLE--CWLY 115
BLAST of GGACT domain-containing protein vs. TrEMBL
Match: A0A0Q9W5D7 (Uncharacterized protein, isoform B OS=Drosophila virilis OX=7244 GN=Dvir\GJ22268 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.387e-17 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTY 418 +F YGTLKS E N H+++ +F+A G ++PLV+G+R N+PFLLD +G+G NV+GEI++++D L D ED P YY+R+ +D+N K E C+ Y Sbjct: 11 VFVYGTLKSGEPNHHWLTTKTN-GHARFLAKGTTMIRFPLVIGTRYNIPFLLDKQGVGHNVQGEIYEVDDT-MLSNLDVLEDYPRYYDREPQTILTDQNEKLE--CWLY 115
BLAST of GGACT domain-containing protein vs. TrEMBL
Match: C1BIV8 (UPF0131 protein CG2811 OS=Osmerus mordax OX=8014 GN=YS11 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.973e-17 Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 68 MSHFQTSFLFFYGTLKSTELN-FHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDE 385 +S Q + +F YGTLK + N F + K +FVAN H E+YPLV+ N+PFLL+I G G+ VKGE++ + D + L F D FE CP Y+R E DE Sbjct: 17 LSSVQMTPIFVYGTLKKGQPNYFRMLDK--SNGAAEFVANAHTLERYPLVIAGEHNIPFLLNIPGEGQRVKGEVYNV-DPQMLEFLDRFEGCPTMYQRTPVKLEVDE 120
BLAST of GGACT domain-containing protein vs. TrEMBL
Match: A0A1B6LGZ0 (GGACT domain-containing protein OS=Graphocephala atropunctata OX=36148 GN=g.2071 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.185e-17 Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTY 418 +F YGTLK+ E N H++++ E +FV G KYPLV+ SR N+PFLLD+ G NV GE++++ D K L D ED P YY R+L ++ ++ C+TY Sbjct: 13 VFVYGTLKTGEPNHHWLTQ-PENGHSRFVGEGMTLVKYPLVIASRYNIPFLLDVPDKGHNVSGEVYEI-DEKMLASLDVLEDYPTYYTRRLETIVLKDSRSSQEQCWTY 119
BLAST of GGACT domain-containing protein vs. TrEMBL
Match: A0A0L0CB68 (Putative gamma-glutamylcyclotransferase OS=Lucilia cuprina OX=7375 GN=FF38_11562 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.810e-17 Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINE---LKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTY 418 +F YGTLK E N H++++ NE +FV G E+ PLV+G+R N+PFLLD +G+G N+KGEI+++ D K D ED P+YY+R++ + N + + C+ Y Sbjct: 11 VFVYGTLKRGEPNHHWLTR----NENGFARFVGEGTTVERLPLVIGTRYNIPFLLDKRGLGHNIKGEIYEV-DEKMFANLDILEDYPVYYDREIQTITLNNNEQVQ--CWLY 115
BLAST of GGACT domain-containing protein vs. Ensembl Cavefish
Match: ggact.3 (gamma-glutamylamine cyclotransferase [Source:NCBI gene;Acc:103030343]) HSP 1 Score: 75.8702 bits (185), Expect = 6.607e-16 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 71 SHFQTSFLFFYGTLKSTELNFHFISKFLEINELK--FVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDEN 388 S Q + +F YGTLK + N + L+++ K F+ + EKYPL++ + N+PFLL+I G G++V GEI+ + D K L F D FE CP Y+R L + ++ Sbjct: 40 SVVQMTHVFVYGTLKKGQPNH---DRMLDVSNGKSEFLCSASTVEKYPLIIAGKYNVPFLLNIPGTGQHVHGEIYSV-DEKMLKFLDWFESCPHMYQRTRVLLKVEQQ 143
BLAST of GGACT domain-containing protein vs. Ensembl Nematostella
Match: EDO33078 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STA6]) HSP 1 Score: 66.2402 bits (160), Expect = 3.000e-13 Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTY 418 +F YGTLK N H +S L K + + YPLVV S +PF++DI G G+ VKGE++++ + L D ED P +Y R+ C ++++ C Y Sbjct: 7 IFVYGTLKQGFPNHHLLSNPLS-GTTKLLCSARTENCYPLVVASDAAIPFMMDIPGKGQRVKGEVYEVC-PQALVHLDKLEDHPRWYRRQPCQVVTEDSEPELMSCEAY 113
BLAST of GGACT domain-containing protein vs. Ensembl Medaka
Match: ggact.3 (gamma-glutamylamine cyclotransferase [Source:NCBI gene;Acc:101169771]) HSP 1 Score: 69.3218 bits (168), Expect = 9.609e-14 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 92 LFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDEN 388 +F YGTLK + N H+ + +F+A ++YPLV+ + N+PFLL++ G G+ V+GEI+++ D + L F D FE P Y+R + E ++ Sbjct: 34 VFVYGTLKRGQPN-HYRMLDATNGKAEFLATALTTQRYPLVIATEYNIPFLLNLPGQGQRVRGEIYEV-DERMLAFLDAFESVPSMYQRTVVDLEVEDG 130
BLAST of GGACT domain-containing protein vs. Planmine SMEST
Match: SMESG000050178.1 (SMESG000050178.1) HSP 1 Score: 134.806 bits (338), Expect = 3.101e-38 Identity = 79/159 (49.69%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 80 QTSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTYXXXXXXXXXXXXXXXDDYSSKVHGKTCQITKNGMHNCLDYMVDVKI 556 +S++F YGTLK+ E N +K + N++KF+ G + EK PLVV SRCN P++LD+ GIGKNVKG++F+L D LP FD+FED P YYERKLC N +LC+TY L +FL +LLNLP LD YS H K C +N + C+ + DVKI Sbjct: 7 SSSYIFLYGTLKTVERNGFMTNKMISKNQIKFIGEGMMVEKRPLVVASRCNFPYILDVTGIGKNVKGQVFQLLDRYCLPEFDEFEDHPFYYERKLCRISLYNNKSKIFLCWTYLLPDFLEDLLNLPLLDRYSGIDHAKVC--PENSENCCIKSISDVKI 163
BLAST of GGACT domain-containing protein vs. Planmine SMEST
Match: SMESG000022735.1 (SMESG000022735.1) HSP 1 Score: 83.1889 bits (204), Expect = 7.245e-19 Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 80 QTSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYL-CYTY 418 + +F+F YGTLKS E N H + + + +V G L EK PL++ S NLP+LLD G G +VKGEI+K + L D E P +YERK+C EN + L C+ Y Sbjct: 4 KCNFIFVYGTLKSNEPNCHLMENLIICKKFSYVGKGVLKEKRPLIIASDYNLPYLLDTTGFGNHVKGEIYKYHTNDALVDLDRLEIHPEHYERKVCKVIVLENDSFQELNCWVY 117
BLAST of GGACT domain-containing protein vs. Planmine SMEST
Match: SMESG000022739.1 (SMESG000022739.1) HSP 1 Score: 80.8777 bits (198), Expect = 1.529e-18 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLC 367 +++F YGTLKS + N + I+ + +++ +G + E P+VV + N+P+LLD+ G G VKGEI+ + + L D+ E P YYERK C Sbjct: 3 NYIFVYGTLKSNQPNHYLIANLINKGLFQYLGDGIMKESRPMVVATEFNIPYLLDVTGAGYKVKGEIYSFDSQESLATLDELESHPTYYERKPC 96
BLAST of GGACT domain-containing protein vs. Planmine SMEST
Match: SMESG000022739.1 (SMESG000022739.1) HSP 1 Score: 80.8777 bits (198), Expect = 4.917e-18 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 86 SFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLC 367 +++F YGTLKS + N + I+ + +++ +G + E P+VV + N+P+LLD+ G G VKGEI+ + + L D+ E P YYERK C Sbjct: 3 NYIFVYGTLKSNQPNHYLIANLINKGLFQYLGDGIMKESRPMVVATEFNIPYLLDVTGAGYKVKGEIYSFDSQESLATLDELESHPTYYERKPC 96
BLAST of GGACT domain-containing protein vs. Planmine SMEST
Match: SMESG000081395.1 (SMESG000081395.1) HSP 1 Score: 63.5438 bits (153), Expect = 4.063e-12 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 149 FLEINELKFVANGHLFEKYPLVVGSRCNLPFLLDIKGIGKNVKGEIFKLNDAKFLPFFDDFEDCPIYYERKLCLAESDENPKTEYLCYTY 418 L I EL ++ G L + PL++ S+ N PFLLD G +VKGEI+ +N+ L D E P ERKLC S + + C+TY Sbjct: 10 LLPIEELTYIGEGILSKIRPLIIASKYNYPFLLDTTSRGLHVKGEIYIINNDSVLSKLDKLEHHPELNERKLCSVLSALGNQKIFECWTY 99 The following BLAST results are available for this feature:
BLAST of GGACT domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of GGACT domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of GGACT domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of GGACT domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of GGACT domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of GGACT domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of GGACT domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of GGACT domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of GGACT domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of GGACT domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of GGACT domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of GGACT domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of GGACT domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of GGACT domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30011479 ID=SMED30011479|Name=GGACT domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1052bpback to top protein sequence of SMED30011479-orf-1 >SMED30011479-orf-1 ID=SMED30011479-orf-1|Name=SMED30011479-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=165bp MSHFQTSFLFFYGTLKSTELNFHFISKFLEINELKFVANGHLFEKYPLVVback to top Annotated Terms
The following terms have been associated with this transcript:
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