Trinucleotide repeat containing 4-like protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30011420 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 14
Homology
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Human
Match: CELF6 (CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]) HSP 1 Score: 272.322 bits (695), Expect = 4.968e-86 Identity = 175/424 (41.27%), Postives = 225/424 (53.07%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMM-MPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYN---PPTLNPI-TLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ E+DVR LF+P+G IEECT+LR +G SKGCAFVK+ ++ EA AI +HGS T+ GASSSLVVK ADT++ER R+ +QQ G++ + LGA YT + A+ G+ P+AA A Q++ SL++ + P SG T+ P + + +N T +NGQ G++ L +N GL+PY P P+ T +Q ++ QQ+EG P+G N+FIYHLPQEFGDAEL Q F PFG V+SAKV++DRATNQSKCFGFVSFDN SAQ AIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 12 SEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALRR-------------------------------MQQMAGHLGAF------------HPAPLPLGACGAYTTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAANSPPGSGPGTL-------PGLPAPIGVNGFG---PLTPQTNGQP--------------GSDTLYNN--------------GLSPYPAAYPSAYAPVSTAFPQQPSALPQQQREG--------PEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 344
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Human
Match: CELF6 (CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]) HSP 1 Score: 263.848 bits (673), Expect = 4.903e-81 Identity = 174/424 (41.04%), Postives = 225/424 (53.07%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMM--PNNSGMNTMCQVQQQTPIISSATQMNDPSVNI---SHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ E+DVR LF+P+G IEECT+LR +G SKGCAFVK+ ++ EA AI +HGS T+ GASSSLVVK ADT++E + L +QQ G++ + LGA YT + A+ G+ P+AA A Q++ SL++ + P SG T+ + PI + P N S T +NG L+P+ + A+ L Y G++ A + T +Q ++ QQ+EG P+G N+FIYHLPQEFGDAEL Q F PFG V+SAKV++DRATNQSKCFGFVSFDN SAQ AIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 127 SEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRE-------------------------------RALRRMQQMAGHLGAF------------HPAPLPLGACGAYTTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPPGSGPGTLPGLP--APIGVNGFGPLTPQTNGQPGSDTLYNNG------LSPYPAQSPGVADPLQQ-------AYAGMHHYAAAYPSA-YAPVSTAFPQQPSALPQQQREG--------PEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 481 HSP 2 Score: 71.2478 bits (173), Expect = 2.140e-12 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLIN 736
KLF+G + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK A +E + RKL ++ PFG I
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Human
Match: AC009690.3 (novel transcript) HSP 1 Score: 263.848 bits (673), Expect = 4.903e-81 Identity = 174/424 (41.04%), Postives = 225/424 (53.07%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMM--PNNSGMNTMCQVQQQTPIISSATQMNDPSVNI---SHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ E+DVR LF+P+G IEECT+LR +G SKGCAFVK+ ++ EA AI +HGS T+ GASSSLVVK ADT++E + L +QQ G++ + LGA YT + A+ G+ P+AA A Q++ SL++ + P SG T+ + PI + P N S T +NG L+P+ + A+ L Y G++ A + T +Q ++ QQ+EG P+G N+FIYHLPQEFGDAEL Q F PFG V+SAKV++DRATNQSKCFGFVSFDN SAQ AIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 127 SEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRE-------------------------------RALRRMQQMAGHLGAF------------HPAPLPLGACGAYTTAILQHQAALLAAAQGPGLGPVAAVAAQMQHVAAFSLVAAPLLPAAAANSPPGSGPGTLPGLP--APIGVNGFGPLTPQTNGQPGSDTLYNNG------LSPYPAQSPGVADPLQQ-------AYAGMHHYAAAYPSA-YAPVSTAFPQQPSALPQQQREG--------PEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 481 HSP 2 Score: 71.2478 bits (173), Expect = 2.140e-12 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLIN 736
KLF+G + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK A +E + RKL ++ PFG I
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Human
Match: CELF2 (CUGBP Elav-like family member 2 [Source:HGNC Symbol;Acc:HGNC:2550]) HSP 1 Score: 240.35 bits (612), Expect = 6.258e-72 Identity = 177/422 (41.94%), Postives = 228/422 (54.03%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLT---LSALGGSAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L+ LGG QYL LQQ N G + I +A Q L + A S NPL+ +A LT SP A++ + MN++ + + + +N+ + ++ QM +G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 106 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLT-PQYLALLQQATSSSNLGAFSGIQQMAGMNALQ------------LQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALT-----SPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINA-LAVAQMLSGMAALNG----GLGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 490 HSP 2 Score: 77.7962 bits (190), Expect = 1.429e-14 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
K+F+G + + +E ++++LF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 17 KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 112
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Human
Match: CELF2 (CUGBP Elav-like family member 2 [Source:HGNC Symbol;Acc:HGNC:2550]) HSP 1 Score: 240.35 bits (612), Expect = 6.258e-72 Identity = 177/422 (41.94%), Postives = 228/422 (54.03%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLT---LSALGGSAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L+ LGG QYL LQQ N G + I +A Q L + A S NPL+ +A LT SP A++ + MN++ + + + +N+ + ++ QM +G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 106 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLT-PQYLALLQQATSSSNLGAFSGIQQMAGMNALQ------------LQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALT-----SPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINA-LAVAQMLSGMAALNG----GLGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 490 HSP 2 Score: 77.7962 bits (190), Expect = 1.429e-14 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
K+F+G + + +E ++++LF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 17 KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 112
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 220.32 bits (560), Expect = 5.837e-66 Identity = 165/422 (39.10%), Postives = 221/422 (52.37%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENL-----QQNTGYIN--PIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPT--NDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+RKLFIG L K+H E+++R++F +G IE+C++LRDQ+G S+GCAFV +T RS A A MH S T+ G S+ LVVKFADT+K++ K + I G +P GG+A L+NL QQ G N +A+L + Q QQQQ + L TG P N A A+QN +A Q L Q A S +G M + +P+ +S +H Q++ LTPF+ AA ++ A L A L + QA + Q G D + GPDG+N+FIYHLPQ+FGD++L F+PFG ++SAKV+ID+ TN SKCFGFVS++N+ SA AI AMNGFQIG KRLKVQLK D G PY
Sbjct: 17 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDV-KTKSMITGSGAGSPK------GGAA--SLLQNLNPALLQQLGGGQNYQAVASLLSLINGQQGQQQQHQQQQNVLGILGTGNPLLGNPAMAAQNQFDAITMAQIAHQQQMLALQGFAVQQGAPSQQQQGLAG--GMAGAKTTSPVAASLA---------NHQQIA--------LTPFAGGAAALDHFQAMQQYALLA----------------NLQATGGVGVQA-TTSAAQMVGNGD--VKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKV----DRGNPY 387
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 220.32 bits (560), Expect = 5.837e-66 Identity = 165/422 (39.10%), Postives = 221/422 (52.37%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENL-----QQNTGYIN--PIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPT--NDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+RKLFIG L K+H E+++R++F +G IE+C++LRDQ+G S+GCAFV +T RS A A MH S T+ G S+ LVVKFADT+K++ K + I G +P GG+A L+NL QQ G N +A+L + Q QQQQ + L TG P N A A+QN +A Q L Q A S +G M + +P+ +S +H Q++ LTPF+ AA ++ A L A L + QA + Q G D + GPDG+N+FIYHLPQ+FGD++L F+PFG ++SAKV+ID+ TN SKCFGFVS++N+ SA AI AMNGFQIG KRLKVQLK D G PY
Sbjct: 17 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDV-KTKSMITGSGAGSPK------GGAA--SLLQNLNPALLQQLGGGQNYQAVASLLSLINGQQGQQQQHQQQQNVLGILGTGNPLLGNPAMAAQNQFDAITMAQIAHQQQMLALQGFAVQQGAPSQQQQGLAG--GMAGAKTTSPVAASLA---------NHQQIA--------LTPFAGGAAALDHFQAMQQYALLA----------------NLQATGGVGVQA-TTSAAQMVGNGD--VKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKV----DRGNPY 387
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 220.32 bits (560), Expect = 5.837e-66 Identity = 165/422 (39.10%), Postives = 221/422 (52.37%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENL-----QQNTGYIN--PIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPT--NDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+RKLFIG L K+H E+++R++F +G IE+C++LRDQ+G S+GCAFV +T RS A A MH S T+ G S+ LVVKFADT+K++ K + I G +P GG+A L+NL QQ G N +A+L + Q QQQQ + L TG P N A A+QN +A Q L Q A S +G M + +P+ +S +H Q++ LTPF+ AA ++ A L A L + QA + Q G D + GPDG+N+FIYHLPQ+FGD++L F+PFG ++SAKV+ID+ TN SKCFGFVS++N+ SA AI AMNGFQIG KRLKVQLK D G PY
Sbjct: 17 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDV-KTKSMITGSGAGSPK------GGAA--SLLQNLNPALLQQLGGGQNYQAVASLLSLINGQQGQQQQHQQQQNVLGILGTGNPLLGNPAMAAQNQFDAITMAQIAHQQQMLALQGFAVQQGAPSQQQQGLAG--GMAGAKTTSPVAASLA---------NHQQIA--------LTPFAGGAAALDHFQAMQQYALLA----------------NLQATGGVGVQA-TTSAAQMVGNGD--VKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKV----DRGNPY 387
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 220.32 bits (560), Expect = 5.837e-66 Identity = 165/422 (39.10%), Postives = 221/422 (52.37%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENL-----QQNTGYIN--PIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPT--NDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+RKLFIG L K+H E+++R++F +G IE+C++LRDQ+G S+GCAFV +T RS A A MH S T+ G S+ LVVKFADT+K++ K + I G +P GG+A L+NL QQ G N +A+L + Q QQQQ + L TG P N A A+QN +A Q L Q A S +G M + +P+ +S +H Q++ LTPF+ AA ++ A L A L + QA + Q G D + GPDG+N+FIYHLPQ+FGD++L F+PFG ++SAKV+ID+ TN SKCFGFVS++N+ SA AI AMNGFQIG KRLKVQLK D G PY
Sbjct: 17 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDV-KTKSMITGSGAGSPK------GGAA--SLLQNLNPALLQQLGGGQNYQAVASLLSLINGQQGQQQQHQQQQNVLGILGTGNPLLGNPAMAAQNQFDAITMAQIAHQQQMLALQGFAVQQGAPSQQQQGLAG--GMAGAKTTSPVAASLA---------NHQQIA--------LTPFAGGAAALDHFQAMQQYALLA----------------NLQATGGVGVQA-TTSAAQMVGNGD--VKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKV----DRGNPY 387
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Celegans
Match: etr-1 (ELAV-Type RNA binding-protein family [Source:UniProtKB/TrEMBL;Acc:A0A0K3AR37]) HSP 1 Score: 219.55 bits (558), Expect = 2.251e-64 Identity = 159/415 (38.31%), Postives = 217/415 (52.29%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPT--NDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+RKLFIG L K+H E+++R++F +G IE+C++LRDQ+G S+GCAFV +T RS A A MH S T+ G S+ LVVKFADT+K++ K + I G +P ++L + L+ L Y +A+L + Q QQQQ + L TG P N A A+QN +A Q L Q A S +G M + +P+ +S +H Q++ LTPF+ AA ++ A L A L + QA + Q G D + GPDG+N+FIYHLPQ+FGD++L F+PFG ++SAKV+ID+ TN SKCFGFVS++N+ SA AI AMNGFQIG KRLKVQLK D G PY
Sbjct: 141 ERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDV-KTKSMITGSGAGSPKGGAASLLQNLNPALLQQLGGGQNY-QAVASLLSLINGQQGQQQQHQQQQNVLGILGTGNPLLGNPAMAAQNQFDAITMAQIAHQQQMLALQGFAVQQGAPSQQQQGLAG--GMAGAKTTSPVAASLA---------NHQQIA--------LTPFAGGAAALDHFQAMQQYALLA----------------NLQATGGVGVQA-TTSAAQMVGNGD--VKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKV----DRGNPY 511 HSP 2 Score: 74.7146 bits (182), Expect = 5.760e-14 Identity = 48/149 (32.21%), Postives = 76/149 (51.01%), Query Frame = 2
Query: 260 FSGLLLNILIMIFQKETEQSTFTETHIDDCFENKDEKKPATNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN-SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
SG +L ++++ + E+ E+ + N + P+T N ++ + K+F+G + +Q E D R LF+ YG++ C ILRD++ SKGC FV + R +A A GA+H I G + +K ADTE R RKL
Sbjct: 1 MSGAVLPAVLVVPKMESVVVPIAESTV----INAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTE-NRNERKL 144
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Fly
Match: bru3 (gene:FBgn0264001 transcript:FBtr0330348) HSP 1 Score: 165.236 bits (417), Expect = 6.430e-46 Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 2
Query: 1388 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++GP+G N+FIYHLPQEFGDAEL QMF PFG VIS+KV+IDRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 240 ISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 331 HSP 2 Score: 84.3445 bits (207), Expect = 2.228e-17 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 539 QNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP 739
+N + GCAFVK+ ++ EA +AI +HGS T+PGASSSLVVK+ADTEKERQ R++QQ L+NP
Sbjct: 31 ENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 97
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Fly
Match: bru3 (gene:FBgn0264001 transcript:FBtr0330350) HSP 1 Score: 165.236 bits (417), Expect = 8.893e-46 Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 2
Query: 1388 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++GP+G N+FIYHLPQEFGDAEL QMF PFG VIS+KV+IDRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 254 ISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 345 HSP 2 Score: 83.9593 bits (206), Expect = 2.813e-17 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 539 QNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP 739
+N + GCAFVK+ ++ EA +AI +HGS T+PGASSSLVVK+ADTEKERQ R++QQ L+NP
Sbjct: 31 ENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 97
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Fly
Match: bru3 (gene:FBgn0264001 transcript:FBtr0330346) HSP 1 Score: 164.851 bits (416), Expect = 9.438e-46 Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 2
Query: 1388 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++GP+G N+FIYHLPQEFGDAEL QMF PFG VIS+KV+IDRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 246 ISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 337 HSP 2 Score: 83.9593 bits (206), Expect = 2.645e-17 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 539 QNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP 739
+N + GCAFVK+ ++ EA +AI +HGS T+PGASSSLVVK+ADTEKERQ R++QQ L+NP
Sbjct: 31 ENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 97
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Fly
Match: bru3 (gene:FBgn0264001 transcript:FBtr0330347) HSP 1 Score: 165.622 bits (418), Expect = 1.260e-45 Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 2
Query: 1388 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++GP+G N+FIYHLPQEFGDAEL QMF PFG VIS+KV+IDRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 272 ISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 363 HSP 2 Score: 83.9593 bits (206), Expect = 3.387e-17 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 539 QNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP 739
+N + GCAFVK+ ++ EA +AI +HGS T+PGASSSLVVK+ADTEKERQ R++QQ L+NP
Sbjct: 31 ENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 97
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Fly
Match: bru3 (gene:FBgn0264001 transcript:FBtr0330355) HSP 1 Score: 165.622 bits (418), Expect = 1.439e-45 Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 2
Query: 1388 LTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++GP+G N+FIYHLPQEFGDAEL QMF PFG VIS+KV+IDRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 279 ISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 370 HSP 2 Score: 83.9593 bits (206), Expect = 3.620e-17 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 539 QNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP 739
+N + GCAFVK+ ++ EA +AI +HGS T+PGASSSLVVK+ADTEKERQ R++QQ L+NP
Sbjct: 31 ENESRSGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 97
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Zebrafish
Match: celf5a (cugbp, Elav-like family member 5a [Source:ZFIN;Acc:ZDB-GENE-050208-746]) HSP 1 Score: 310.071 bits (793), Expect = 1.788e-98 Identity = 191/428 (44.63%), Postives = 241/428 (56.31%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ---------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GML KQ TE+DV LF+PYG IEECT+LR +GNSKGCAFVK++T +EA +AI A+HGS T+PGASSSLVVKFADT+KER R++QQ + FG+ NP + AL S YS Y L Q + GY+ P Q +GA +++ PT S F LA + N+TT S S++ P +G ++ P + + +NG L P+S + T A+ L T G+ Y + P T L S+ + + GP+G N+FIYHLPQEFGD EL QMF PFGTVIS+KV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 159 SESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAI---ALPFSTYSTYAHALMQQQAALMAASHGGYLAPSVAFPTTQIHQ--------MGA---LNINSLPPTPMTPVSGEFHQT--LAGLSSPPANITT------SAVPSIVTPIVNGFTSIPHQPNGHPAVEAV--------------YTNG------LPPYSTQSPTAADTLQQAFT------------GVQQYT--AIYPATTLTPIGQSLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 528 HSP 2 Score: 78.5666 bits (192), Expect = 7.273e-15 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL
Sbjct: 79 KLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKL 168
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Zebrafish
Match: celf5a (cugbp, Elav-like family member 5a [Source:ZFIN;Acc:ZDB-GENE-050208-746]) HSP 1 Score: 299.671 bits (766), Expect = 1.007e-94 Identity = 188/426 (44.13%), Postives = 232/426 (54.46%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ---------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQM-----NDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKP 1666
DRKLF+GML KQ TE+DV LF+PYG IEECT+LR +GNSKGCAFVK++T +EA +AI A+HGS T+PGASSSLVVKFADT+KER R++QQ + FG+ NP + AL S YS Y L Q + GY+ P S PT + L +N L +P T S + + + T TPI++ T + P+V +T NG L P+S + T A+ L T G+ Y + P T L S+ + + GP+G N+FIYHLPQEFGD EL QMF PFGTVIS+KV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +P
Sbjct: 152 DRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAI---ALPFSTYSTYAHALMQQQAALMAASHGGYLAP----------------------------SVAFPTTQIH-QMGALNINSLPP--------------TPMTPVSGLSSPPANITTSAVPSIVTPIVNGFTSIPHQPNGHPAVEAVYT---NG------LPPYSTQSPTAADTLQQAFT------------GVQQYT--AIYPATTLTPIGQSLPQPPQVIQQQQQREGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRP 506 HSP 2 Score: 75.0998 bits (183), Expect = 7.318e-14 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E R RKL
Sbjct: 67 KLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSE-SRGDRKL 155
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Zebrafish
Match: celf3a (cugbp, Elav-like family member 3a [Source:NCBI gene;Acc:57922]) HSP 1 Score: 286.96 bits (733), Expect = 1.779e-90 Identity = 188/427 (44.03%), Postives = 242/427 (56.67%), Query Frame = 2
Query: 407 KQAQHKGE-DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNP--LAAAVAASQNLTTQSLLSPSTAASMM--MPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLA-PYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
K A +G DRKLF+GMLGKQ ++ DVR +F+P+G+IEECT+LR +G SKGCAFVKY + +EA AI A+HGS T+PGASSSLVVKFADTEKER R++QQ + G+I+P +L AY+ Y + L Q + A L + + T A Q +NP + A AS ++ + P+ AA+ + +P +N+ P + +A S + + Q + L P A ++ A T PA YG L G P+ P TL+A+Q Q Q+ GP+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 84 KPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRMQQVASQLGVISP----MSLHLGAYNAYTQALVQQQALVAQSAYL-------------------------SPVATVAAVQMQQLAALNPSSIIATPIASITPSSGTSTPPTIAATPVPALPPPIAVNSY-------PPVPAAPNGQSASEALYTNGVHPYQAQSPALDPLQQAYTGMQHYTA----TYPAAYG---LVGQPFPHQP------TLVAQQPQQPQQLQQR-------EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 452 HSP 2 Score: 72.7886 bits (177), Expect = 3.449e-13 Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLS----ALGGSAYSQYLENLQ 799
KLFIG + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E R RKL ++ PFG I L A G A+ +Y N +
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSEG-RGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAE 146
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Zebrafish
Match: celf3a (cugbp, Elav-like family member 3a [Source:NCBI gene;Acc:57922]) HSP 1 Score: 286.96 bits (733), Expect = 1.779e-90 Identity = 188/427 (44.03%), Postives = 242/427 (56.67%), Query Frame = 2
Query: 407 KQAQHKGE-DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNP--LAAAVAASQNLTTQSLLSPSTAASMM--MPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLA-PYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
K A +G DRKLF+GMLGKQ ++ DVR +F+P+G+IEECT+LR +G SKGCAFVKY + +EA AI A+HGS T+PGASSSLVVKFADTEKER R++QQ + G+I+P +L AY+ Y + L Q + A L + + T A Q +NP + A AS ++ + P+ AA+ + +P +N+ P + +A S + + Q + L P A ++ A T PA YG L G P+ P TL+A+Q Q Q+ GP+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 84 KPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRMQQVASQLGVISP----MSLHLGAYNAYTQALVQQQALVAQSAYL-------------------------SPVATVAAVQMQQLAALNPSSIIATPIASITPSSGTSTPPTIAATPVPALPPPIAVNSY-------PPVPAAPNGQSASEALYTNGVHPYQAQSPALDPLQQAYTGMQHYTA----TYPAAYG---LVGQPFPHQP------TLVAQQPQQPQQLQQR-------EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 452 HSP 2 Score: 72.7886 bits (177), Expect = 3.449e-13 Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLS----ALGGSAYSQYLENLQ 799
KLFIG + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E R RKL ++ PFG I L A G A+ +Y N +
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSEG-RGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAE 146
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Zebrafish
Match: celf3b (cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]) HSP 1 Score: 286.574 bits (732), Expect = 1.995e-90 Identity = 186/422 (44.08%), Postives = 243/422 (57.58%), Query Frame = 2
Query: 422 KGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYS---QYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPST---AASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+GEDRKLF+GMLGKQ +++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ + SEA +AI ++HGS T+PGASSSLVVKFADTEKER R++QQ + G+ P +TL+ +AY+ + L Y++P A++ +Q L IA T P +T PT L P+ +A+ + S L P+T AS + N + Q Q+P+ + L P A A ++ A+ P YG + +P L TL+++Q L Q+E GP+G NVFIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQ AIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 91 RGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDECTVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKERGVRRMQQVTSQLGVYTP-VTLNFNAYNAYTQALVQQQALVAQAQYLSPAASMQIQQMAALNASGIIATPITPPSGANTP-PT---------LAATPV-SALPQPIAVNGYSHLPPTTNGQPASEIY-----TNGLHPYQAQSPVAA--------------------------LDPLQQAYAGMQHYTAA----YPTAYGLV--------SPQFLQQPTLISQQQL-----QRE--------GPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 442 HSP 2 Score: 77.0258 bits (188), Expect = 1.677e-14 Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLSALGGSA 772
KLFIG + + E D++ +F+ YG I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL ++ PFG I+ L G++
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAVKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDECTVLRGPDGTS 134
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Xenopus
Match: celf2 (CUGBP, Elav-like family member 2 [Source:NCBI gene;Acc:100125022]) HSP 1 Score: 241.506 bits (615), Expect = 3.226e-72 Identity = 178/426 (41.78%), Postives = 228/426 (53.52%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGG--SAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMND-----PSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L G + QYL LQQ N G + I +A Q L + A S NPL+ +A LT SP A++ + MN++ + + + +N+ +VNI+ QM +G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 125 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGALTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQ------------LQNLATLAAAAAAAQTSATTTNANPLSTTTSALGALT-----SPVAASTANSSAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTVNIA--QMLSGMAALNG----GLGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 513 HSP 2 Score: 82.4185 bits (202), Expect = 5.542e-16 Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 2
Query: 338 IDDCFENKDEKKPATNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
+D D TN N + Q + K+F+G + + +E +++DLF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 3 VDSRLLVSDRINGTTNKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 131
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Xenopus
Match: celf2 (CUGBP, Elav-like family member 2 [Source:NCBI gene;Acc:100125022]) HSP 1 Score: 241.121 bits (614), Expect = 7.057e-72 Identity = 178/426 (41.78%), Postives = 228/426 (53.52%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGG--SAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMND-----PSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L G + QYL LQQ N G + I +A Q L + A S NPL+ +A LT SP A++ + MN++ + + + +N+ +VNI+ QM +G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 148 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGALTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQ------------LQNLATLAAAAAAAQTSATTTNANPLSTTTSALGALT-----SPVAASTANSSAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTVNIA--QMLSGMAALNG----GLGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 536 HSP 2 Score: 81.2629 bits (199), Expect = 1.459e-15 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 2
Query: 380 TNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
TN N + Q + K+F+G + + +E +++DLF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 40 TNKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 154
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Xenopus
Match: celf2 (CUGBP, Elav-like family member 2 [Source:NCBI gene;Acc:100125022]) HSP 1 Score: 239.58 bits (610), Expect = 1.405e-71 Identity = 178/428 (41.59%), Postives = 231/428 (53.97%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGG--SAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIAL-GATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPN-NSGMNTMCQVQQQTPIISSATQMND-----PSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L G + QYL LQQ N G + I +A + +++ AL + L + TND S LT L+ AAS + + MN++ + + + +N+ +VNI+ QM +G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 126 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGALTPQYLALLQQATSSSNLGAFSGIQQMAGKWRKKHLILANYALFSSALKF-----FCTNDV-----------------LSWKLTFHYLIFFLVAASTANSSAGAAMNSLTSLGTLQGLAGATVGLNNINALAGTVNIA--QMLSGMAALNG----GLGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 511 HSP 2 Score: 80.8777 bits (198), Expect = 1.898e-15 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 2
Query: 380 TNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
TN N + Q + K+F+G + + +E +++DLF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 18 TNKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 132
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Xenopus
Match: celf2 (CUGBP, Elav-like family member 2 [Source:NCBI gene;Acc:100125022]) HSP 1 Score: 237.654 bits (605), Expect = 3.895e-71 Identity = 173/423 (40.90%), Postives = 226/423 (53.43%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGG--SAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIAL-GATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPN-NSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L G + QYL LQQ N G + I +A + +++ AL + L + TND S LT L+ AAS + + MN++ + + + +N+ + ++ G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 106 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGALTPQYLALLQQATSSSNLGAFSGIQQMAGKWRKKHLILANYALFSSALKF-----FCTNDV-----------------LSWKLTFHYLIFFLVAASTANSSAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGG-----------LGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 481 HSP 2 Score: 78.9518 bits (193), Expect = 5.866e-15 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
K+F+G + + +E +++DLF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 17 KMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 112
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Xenopus
Match: tpbg (trophoblast glycoprotein [Source:Xenbase;Acc:XB-GENE-1016283]) HSP 1 Score: 156.762 bits (395), Expect = 4.395e-45 Identity = 73/91 (80.22%), Postives = 79/91 (86.81%), Query Frame = 2
Query: 1397 PDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
P G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 33 PPGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 121
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Mouse
Match: Celf3 (CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]) HSP 1 Score: 307.76 bits (787), Expect = 5.643e-98 Identity = 193/430 (44.88%), Postives = 250/430 (58.14%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ--------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHT---QMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ T++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ T +EA AI +H S T+PGASSSLVVKFADTEKER R++QQ G+ +P AL AYS Y + L Q ++ Y++P+AT+A Q + L AT P T S+G T A A+ + P A V + TQ P+ A + PN + + + P ++ +H+ +S Q+ + P A A ++ A+ PA Y +L A PP L Q QQ++ + GPDG N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 88 SESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSP----IALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAISANGLIAT-PITPSSGTSTPPAIAATPVSAI-PAALGVNGYSPVPTQPTGQPAPDA--LYPNG------VHPYPDEALSAERSAGGVPIMSQAHSWLVMLSAAQSPAAPVDPLQQAYAGMQHYTAA----YPAAY---SLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 494 HSP 2 Score: 74.7146 bits (182), Expect = 1.021e-13 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLSALGGSA 772
KLF+G + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL ++ PFG I+ L G++
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTS 134
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Mouse
Match: Celf5 (CUGBP, Elav-like family member 5 [Source:MGI Symbol;Acc:MGI:2442333]) HSP 1 Score: 298.516 bits (763), Expect = 5.067e-95 Identity = 182/415 (43.86%), Postives = 231/415 (55.66%), Query Frame = 2
Query: 425 GEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
G DRKLF+GML KQ +E+DV LF+P+G I+ECT+LR +G+SKGCAFVK+++ +EA AI A+HGS T+PGASSSLVVKFADT+KER R++QQ + G++ P LTL SAY+Q L +QQ T ++ ++ G P I S N L P+A A L + LL + +M P +G + P + T +NG L P+ + T A L PA G + P + P+ Q + QQ+E GP+G N+FIYHLPQEFGD EL QMF PFG +IS+KV++DRATNQSKCFGFVSFD+ SAQAAIQAMNGFQIGMKRLKVQLKRPK D G PY
Sbjct: 93 GRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQAL--MQQQTTVLS-------------TSGSYLSPGVAFPPCHIQQI----GAVSLNGLPATPIAPA----SGLHSPPLLGTAAVPGLMAPIPNGFPGVLPFPGSHPALE--------------TVYANG------LVPYPAQSPTVAETLH------PAFSGVQQYTAMYPTA--AIAPVAHSVPQPPHLLQQQRE--------GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDHPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DPGHPY 446 HSP 2 Score: 74.3294 bits (181), Expect = 1.169e-13 Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRD-QNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTE---------------KERQTRKLQQFINPFGLINPGLTLSALGGSA 772
KLF+G + + E D++ LF+ +G I E T+L+D G KGCAF+ Y R A A A+H T+PG + + VK AD+E K++ + + PFG+I+ L GS+
Sbjct: 8 KLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSS 135
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Mouse
Match: Celf3 (CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]) HSP 1 Score: 296.59 bits (758), Expect = 5.609e-95 Identity = 189/421 (44.89%), Postives = 235/421 (55.82%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ--------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
DRKLF+GMLGKQ T++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ T +EA AI +H S T+PGASSSLVVKFADTEKER R++QQ G+ +P AL AYS Y + L Q ++ Y++P+AT+A Q + L AT P T S+G T A A+ + P A V + TQ P+ A + PN H + P + P A A ++ A+ PA Y +L A PP L Q QQ++ + GPDG N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 17 DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSP----IALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAISANGLIAT-PITPSSGTSTPPAIAATPVSAI-PAALGVNGYSPVPTQPTGQPAPDA--LYPNG-----------------------------VHPYPAQSPAAP--VDPLQQAYAGMQHYTAA----YPAAY---SLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 389
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Mouse
Match: Celf3 (CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]) HSP 1 Score: 296.204 bits (757), Expect = 8.544e-94 Identity = 191/421 (45.37%), Postives = 239/421 (56.77%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ--------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
DRKLF+GMLGKQ T++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ T +EA AI +H S T+PGASSSLVVKFADTEKER R++QQ G+ +P AL AYS Y + L Q ++ Y++P+AT+A Q + L AT P T S+G T A A+ + P A V + TQ P+ A + PN G++ P S A ++ P A A ++ A+ PA Y +L A PP L Q QQ++ + GPDG N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 93 DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSP----IALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAISANGLIAT-PITPSSGTSTPPAIAATPVSAI-PAALGVNGYSPVPTQPTGQPAPDA--LYPN--GVHPY-------PAQSPAAPVD----------------------PLQQAYAGMQHYTAA----YPAAY---SLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 465 HSP 2 Score: 72.4034 bits (176), Expect = 5.122e-13 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLSALGGSA 772
KLF+G + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E R RKL ++ PFG I+ L G++
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTS 133
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Mouse
Match: Celf2 (CUGBP, Elav-like family member 2 [Source:MGI Symbol;Acc:MGI:1338822]) HSP 1 Score: 240.736 bits (613), Expect = 2.488e-72 Identity = 177/422 (41.94%), Postives = 229/422 (54.27%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLT---LSALGGSAYSQYLENLQQ-----NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
EDRKLFIGM+ K+ E+D+R +F P+G IEEC ILR +G S+GCAFV ++TR+ A AI AMH S T+ G SS +VVKFADT+K+++ R+LQQ + T L+ LGG QYL LQQ N G + I +A Q L + A S NPL++ +A LT SP A++ + MN++ + + + +N+ + ++ QM +G L A N A L Y G+ A PTL +LL +Q S QKEG P+G+N+FIYHLPQEFGD ++ QMF PFG VISAKV+ID+ TN SKCFGFVS+DN SAQAAIQAMNGFQIGMKRLKVQLKR K + KPY
Sbjct: 106 EDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGG-LTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQ------------LQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALT-----SPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINA-LAVAQMLSGMAALNG----GLGATGLTNGTAGTMDALTQAYSGIQQYAAAAL--PTLYSQSLLQQQ--SAAGSQKEG--------PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK--NDSKPY 490 HSP 2 Score: 78.1814 bits (191), Expect = 9.555e-15 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFI 715
K+F+G + + +E ++++LF+PYGA+ + +LRD++ N SKGC FV + TR A A A+H T+PG + +K AD+EK + FI
Sbjct: 17 KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFI 112
BLAST of Trinucleotide repeat containing 4-like protein vs. UniProt/SwissProt
Match: sp|Q91579|CEL3A_XENLA (CUGBP Elav-like family member 3-A OS=Xenopus laevis OX=8355 GN=tnrc4-a PE=2 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 2.782e-95 Identity = 191/428 (44.63%), Postives = 252/428 (58.88%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLEN--LQQ-------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ T++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ T +EA AI A+HGS T+PGASSSLVVKFADTEKER R++QQ N G+ +P + L SAY+Q + + +QQ ++ Y+NP+AT+A QQ+ + AT P T +NP+ ++ S T +L + +A +P G+N V Q S Q + ++ + Q+ L P A A ++ A+ PA YG ++ P + +Q Q QQ+EG P+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 88 SESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQVANQLGMFSP-IALQFGAYSAYTQAVSDQLMQQQAALVAAHSAYLNPMATMAAVQMQQMATINPNGIIAT-PIT-----------------QINPITSSSGTS---TPPTLTATQVSA---IPATLGVNGYSAVPTQ-----STVQPSSEAIYTNGLHPYPAQSPVAQLDPLQQAYAGMQHYTAA----YPAAYGLVS---------PAFTQPPAILQQQPPQQQQQREG--------PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 462
BLAST of Trinucleotide repeat containing 4-like protein vs. UniProt/SwissProt
Match: sp|Q08E07|CELF3_BOVIN (CUGBP Elav-like family member 3 OS=Bos taurus OX=9913 GN=CELF3 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 1.288e-94 Identity = 193/427 (45.20%), Postives = 244/427 (57.14%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ--------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ T++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ T +EA AI +H S T+PGASSSLVVKFADTEKER R++QQ G+ +P AL AYS Y + L Q ++ Y++P+AT+A Q + L AT P T S+G T A A+ + P A V + TQ P+ A + PN G++ P S A ++ P A A ++ T PA Y +L A PP L Q QQ++ ++ GPDG N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 88 SESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSP----IALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIAT-PITPSSGTSTPPAIAATPVSAI-PAALGVNGYSPVPTQPTGQPAPDA--LYPN--GVHPY-------PAQSPAAPVD----------------------PLQQAYAGMQHY-----TAYPAAY---SLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQRE----GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 461 HSP 2 Score: 75.485 bits (184), Expect = 4.459e-13 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLSALGGSA 772
KLF+G + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL ++ PFG I+ L G++
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTS 134
BLAST of Trinucleotide repeat containing 4-like protein vs. UniProt/SwissProt
Match: sp|Q8CIN6|CELF3_MOUSE (CUGBP Elav-like family member 3 OS=Mus musculus OX=10090 GN=Celf3 PE=2 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 5.976e-93 Identity = 191/421 (45.37%), Postives = 239/421 (56.77%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ--------NTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
DRKLF+GMLGKQ T++DVR +F+P+G I+ECT+LR +G SKGCAFVK+ T +EA AI +H S T+PGASSSLVVKFADTEKER R++QQ G+ +P AL AYS Y + L Q ++ Y++P+AT+A Q + L AT P T S+G T A A+ + P A V + TQ P+ A + PN G++ P S A ++ P A A ++ A+ PA Y +L A PP L Q QQ++ + GPDG N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 93 DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSP----IALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAISANGLIAT-PITPSSGTSTPPAIAATPVSAI-PAALGVNGYSPVPTQPTGQPAPDA--LYPN--GVHPY-------PAQSPAAPVD----------------------PLQQAYAGMQHYTAA----YPAAY---SLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 465 HSP 2 Score: 72.4034 bits (176), Expect = 3.582e-12 Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLSALGGSA 772
KLF+G + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E R RKL ++ PFG I+ L G++
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTS 133
BLAST of Trinucleotide repeat containing 4-like protein vs. UniProt/SwissProt
Match: sp|Q7ZWM3|CEL3B_XENLA (CUGBP Elav-like family member 3-B OS=Xenopus laevis OX=8355 GN=tnrc4-b PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.221e-92 Identity = 186/428 (43.46%), Postives = 247/428 (57.71%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLEN---------LQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GMLGKQ T++DVR +F+ +G I+ECT+LR +G SKGCAFVK+ T +EA AI A+HGS T+PGASSSLVVKFADTEKER R++QQ N G+ +P + L SAY+Q + + + + Y+NP+AT+A QQ+ + AT P T I ++ ++ L P++A +P G+N V Q S Q + ++ + Q+ L P A A ++ A+ PA YG L A PP + L+ Q Q++ ++ GP+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQ+MNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 88 SESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQVANQLGMFSP-IALQFGAYSAYTQAVSDQLMQQQAALVAAQSAYLNPMATMAAVQMQQMATINPNGIIAT-PITQINSITSSSGTSTPPTLTATPVSA-----------------------IPATLGVNGYSAVPTQ-----STVQPSSEAIYTNGLHPYPAQSPVAQLDPLQQAYAGMQHYTAA----YPAAYG---LVSPAFTQPPAI----------LTQQPPQQQQQRE----GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK--DANRPY 462 HSP 2 Score: 74.3294 bits (181), Expect = 9.668e-13 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL
Sbjct: 8 KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKL 97
BLAST of Trinucleotide repeat containing 4-like protein vs. UniProt/SwissProt
Match: sp|Q9IBD1|CELF3_DANRE (CUGBP Elav-like family member 3 OS=Danio rerio OX=7955 GN=celf3 PE=2 SV=2) HSP 1 Score: 286.96 bits (733), Expect = 1.343e-89 Identity = 188/427 (44.03%), Postives = 242/427 (56.67%), Query Frame = 2
Query: 407 KQAQHKGE-DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNP--LAAAVAASQNLTTQSLLSPSTAASMM--MPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLA-PYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
K A +G DRKLF+GMLGKQ ++ DVR +F+P+G+IEECT+LR +G SKGCAFVKY + +EA AI A+HGS T+PGASSSLVVKFADTEKER R++QQ + G+I+P +L AY+ Y + L Q + A L + + T A Q +NP + A AS ++ + P+ AA+ + +P +N+ P + +A S + + Q + L P A ++ A T PA YG L G P+ P TL+A+Q Q Q+ GP+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 84 KPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRMQQVASQLGVISP----MSLHLGAYNAYTQALVQQQALVAQSAYL-------------------------SPVATVAAVQMQQLAALNPSSIIATPIASITPSSGTSTPPTIAATPVPALPPPIAVNSY-------PPVPAAPNGQSASEALYTNGVHPYQAQSPALDPLQQAYTGMQHYTA----TYPAAYG---LVGQPFPHQP------TLVAQQPQQPQQLQQR-------EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 452 HSP 2 Score: 72.7886 bits (177), Expect = 2.603e-12 Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLS----ALGGSAYSQYLENLQ 799
KLFIG + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E R RKL ++ PFG I L A G A+ +Y N +
Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNALHEQKTLPGMNRPIQVKPADSEG-RGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAE 146
BLAST of Trinucleotide repeat containing 4-like protein vs. TrEMBL
Match: D5JG66 (Trinucleotide repeat containing 4-like protein OS=Dugesia japonica OX=6161 GN=TNRC-4 PE=2 SV=1) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 415/460 (90.22%), Postives = 437/460 (95.00%), Query Frame = 2
Query: 290 MIFQKETEQSTFTETHIDDCFENKDEKKPATNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
MIFQKETEQ++F ETH+DDCFE+KDEKK NN++ K+ KQ QHKGEDRKLFIGMLGKQHTEDDVRD+FKP+G IEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQY+ENLQQNTGYINPIATLALQLQQQLQQQQQI LGATLPY+LSTGI ++D NASQNFLGVN LAAAVAASQNLTTQSLLSPSTA S+MMPNNSGMNTMCQ+Q QT +++SAT +NDPSVNI++T +SNGQTR QNLTPFSLAAATG NWL SN T LP MYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY
Sbjct: 1 MIFQKETEQASFAETHVDDCFESKDEKKHTNNNNSGKLGKQTQHKGEDRKLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYIENLQQNTGYINPIATLALQLQQQLQQQQQITLGATLPYSLSTGISSSDVNASQNFLGVNSLAAAVAASQNLTTQSLLSPSTATSIMMPNNSGMNTMCQLQPQTSVMTSATGINDPSVNITNTPISNGQTRAQNLTPFSLAAATGPNWLTSNPTALPQMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 460
BLAST of Trinucleotide repeat containing 4-like protein vs. TrEMBL
Match: A0A267ES24 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig032096g1 PE=4 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 5.963e-111 Identity = 214/430 (49.77%), Postives = 268/430 (62.33%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWL-ASNSTTLPAMYGGLN-LCGLAPY--------------NPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+DRKLF+GML KQ +E+DVR LF+PYG IEECTILRDQNG SKGCAFVKY EA +AI +HGS T+PGASSS+VVKFAD EKERQ RKLQQ + P GLI+PGL + + G QQ++GYINP+A LA+QLQ AT P T G T N++ NP + +LT+ + A+++ P +SG + QQQ P+ S+A + + + + ++ + A ++ + + L MY ++ G+A Y P L +QA+SM VQ K+G+K+FILTGPDG N+FIYHLPQEFGD ELAQMF+PFGTVISAKVY+DRATNQSKCFGFVSFDNS +A AAIQAMNGFQIGMKRLKVQLKRPKG G+PY
Sbjct: 76 DDRKLFVGMLSKQQSEEDVRRLFEPYGQIEECTILRDQNGASKGCAFVKYGNHLEAQSAINNLHGSQTMPGASSSIVVKFADNEKERQLRKLQQMVGPLGLISPGL--AGVAGQLNPVATPFPQQSSGYINPVAALAIQLQS-----------ATGPQTGGLGGLTPALNSTV----ANPGSGCGGGHTSLTS------AAQATVLSPVSSGAGGL---QQQQPLSSAAAAAAAVNGAAAAAAAAAAASADTAAALYAATSGMPAQYINGAGTDPLHQMYSTVHPYSGIAAYPADPTATYPAAAAAAAYAAAPFMSLTQQAMSMPVQHKDGSKEFILTGPDGCNLFIYHLPQEFGDCELAQMFAPFGTVISAKVYVDRATNQSKCFGFVSFDNSAAAAAAIQAMNGFQIGMKRLKVQLKRPKG--EGRPY 477
BLAST of Trinucleotide repeat containing 4-like protein vs. TrEMBL
Match: A0A267DS20 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008724g1 PE=4 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 4.179e-110 Identity = 213/430 (49.53%), Postives = 267/430 (62.09%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWL-ASNSTTLPAMYGGLN-LCGLAPY--------------NPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+DRKLF+GML KQ +E+DVR LF+PYG IEECTILRDQNG SKGCAFVKY EA +AI +HGS T+PGASSS+VVKFAD E ERQ RKLQQ + P GLI+PGL + + G QQ++GYINP+A LA+QLQ AT P T G T N++ NP + +LT+ + A+++ P +SG + QQQ P+ S+A + + + + ++ + A ++ + + L MY ++ G+A Y P L +QA+SM VQ K+G+K+FILTGPDG N+FIYHLPQEFGD ELAQMF+PFGTVISAKVY+DRATNQSKCFGFVSFDNS +A AAIQAMNGFQIGMKRLKVQLKRPKG G+PY
Sbjct: 77 DDRKLFVGMLSKQQSEEDVRRLFEPYGQIEECTILRDQNGASKGCAFVKYGNHLEAQSAINNLHGSQTMPGASSSIVVKFADNENERQLRKLQQMVGPLGLISPGL--AGVAGQLNPVATPFPQQSSGYINPVAALAIQLQS-----------ATGPQTGGLGGLTPALNSTV----ANPGSGCGGGHTSLTS------AAQATVLSPVSSGAGGL---QQQQPLSSAAAAAAAVNGAAAAAAAAAAASADTAAALYAATSGMPAQYINGAGTDPLHQMYSTVHPYSGIAAYPADPTATYPAAAAAAAYAAAPFMSLTQQAMSMPVQHKDGSKEFILTGPDGCNLFIYHLPQEFGDCELAQMFAPFGTVISAKVYVDRATNQSKCFGFVSFDNSAAAAAAIQAMNGFQIGMKRLKVQLKRPKG--EGRPY 478
BLAST of Trinucleotide repeat containing 4-like protein vs. TrEMBL
Match: A0A267GPB9 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig032096g2 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 4.437e-106 Identity = 208/422 (49.29%), Postives = 260/422 (61.61%), Query Frame = 2
Query: 452 MLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWL-ASNSTTLPAMYGGLN-LCGLAPY--------------NPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
ML KQ +E+DVR LF+PYG IEECTILRDQNG SKGCAFVKY EA +AI +HGS T+PGASSS+VVKFAD EKERQ RKLQQ + P GLI+PGL + + G QQ++GYINP+A LA+QLQ AT P T G T N++ NP + +LT+ + A+++ P +SG + QQQ P+ S+A + + + + ++ + A ++ + + L MY ++ G+A Y P L +QA+SM VQ K+G+K+FILTGPDG N+FIYHLPQEFGD ELAQMF+PFGTVISAKVY+DRATNQSKCFGFVSFDNS +A AAIQAMNGFQIGMKRLKVQLKRPKG G+PY
Sbjct: 1 MLSKQQSEEDVRRLFEPYGQIEECTILRDQNGASKGCAFVKYGNHLEAQSAINNLHGSQTMPGASSSIVVKFADNEKERQLRKLQQMVGPLGLISPGL--AGVAGQLNPVATPFPQQSSGYINPVAALAIQLQS-----------ATGPQTGGLGGLTPALNSTV----ANPGSGCGGGHTSLTS------AAQATVLSPVSSGAGGL---QQQQPLSSAAAAAAAVNGAAAAAAAAAAASADTAAALYAATSGMPAQYINGAGTDPLHQMYSTVHPYSGIAAYPADPTATYPAAAAAAAYAAAPFMSLTQQAMSMPVQHKDGSKEFILTGPDGCNLFIYHLPQEFGDCELAQMFAPFGTVISAKVYVDRATNQSKCFGFVSFDNSAAAAAAIQAMNGFQIGMKRLKVQLKRPKG--EGRPY 394
BLAST of Trinucleotide repeat containing 4-like protein vs. TrEMBL
Match: A0A1S3PCG6 (CUGBP Elav-like family member 5 isoform X11 OS=Salmo salar OX=8030 GN=LOC106584443 PE=4 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 8.846e-98 Identity = 200/435 (45.98%), Postives = 250/435 (57.47%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ---------NTGYINPIATLAXXXXXXXXXXXXIALGAT----LPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMN-DPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPI--TLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GML KQ TE+DV LF+PYG IEECT+LR +GNSKGCAFVK++T +EA +AI A+HGS T+PGASSSLVVKFADT+KER R++QQ + FG+ NP + AL S YS Y L Q + GY+ P Q +GA LP+ T + A PL + N+TT S+++P +P++ Q N P+V T +NG L+P+S + T A+ L T + Y + G TL PI TL + Q QQ+EG GP+G N+FIYHLPQEFGD EL QMF PFG+VIS+KV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 159 SESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAI---ALPFSTYSTYAHALMQQQAAIMAASHGGYLTPSVAFPATQIHQ--------MGALNINGLPHNSMTPVSAEFHQALGEHCVSFPLPGLSSPPANITTPSIVTPIVNGFTGIPHH--------------------QPNGHPAVE---TMYTNG------LSPYSTQSPTAADTLQQAFTGV-QQYTAIYPAG-------TLTPIGQTLPQPSQVIQQQQQREG------EGPEGCNLFIYHLPQEFGDNELMQMFLPFGSVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 537 HSP 2 Score: 77.7962 bits (190), Expect = 2.584e-11 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL
Sbjct: 79 KLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKL 168
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Cavefish
Match: celf3b (cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]) HSP 1 Score: 289.271 bits (739), Expect = 1.934e-92 Identity = 188/432 (43.52%), Postives = 240/432 (55.56%), Query Frame = 2
Query: 422 KGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ----NTGYINP---IATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGA--------NWLASNSTTLPAMYGGLNLCGLAPY-NPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+GEDRKLF+GMLGKQ +DDVR +F+ +G I+ECTILR +G SKGCAFVK+ + +EA AI ++HGS T+PGASSSLVVKFADTEKER R++QQ + + +P +TL+ +AY+Q L QQ + Y++P +AT+ +Q L IA T P T S+G T + + P+ A L P A + P + N + S T +NG + PF +A + + PA YG ++ +P+ PTL P Q QQ+EG P+G N+FIYHLPQEF D+EL QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQ AIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 15 RGEDRKLFVGMLGKQQEDDDVRKMFELFGRIDECTILRAPDGTSKGCAFVKFQSHAEAQAAINSLHGSRTLPGASSSLVVKFADTEKERGLRRMQQVASQLSVFSP-MTLNLGAYNAYAQALVQQQQTLVAQSAYLSPIATVATVQMQQMAALNANGIIATPIT-PITPSSGTNTPPS------IAATPVPA-------------LPPPIALNGYSPVPTAANGQ---------------------SASETIYTNG------IHPFQAQSAVAVLDPLQQAYTGMQHYTAAYPAAYGLVS----SPFPQQPTLVP----------QQQQQREG--------PEGCNIFIYHLPQEFTDSELLQMFVPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 374
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Cavefish
Match: ENSAMXT00000034315.1 (pep primary_assembly:Astyanax_mexicanus-2.0:5:21901697:21908852:1 gene:ENSAMXG00000034719.1 transcript:ENSAMXT00000034315.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 162.155 bits (409), Expect = 2.816e-47 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GP+G N+FIYHLPQEFGD EL QMF PFGTVIS+KV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 35 GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 124
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Cavefish
Match: ENSAMXT00000012369.2 (CUGBP Elav-like family member 5 [Source:NCBI gene;Acc:103039850]) HSP 1 Score: 167.933 bits (424), Expect = 6.157e-45 Identity = 72/113 (63.72%), Postives = 93/113 (82.30%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTL 751
++ +GEDRKLF+GML KQ TE+DV +F+PYG IEECT+LR +GNSKGCAFVK++T +EA +AIG +HGS T+PGASSSLVVKFADT+KER R++QQ + FG+ NP + L
Sbjct: 191 SESRGEDRKLFVGMLNKQQTEEDVYRIFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAIGGLHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAVAL 303 HSP 2 Score: 160.999 bits (406), Expect = 1.806e-42 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GP+G N+FIYHLPQEFGD EL QMF PFG+VIS+KV++DRATNQSKCFGFVSFDN SA AAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 467 GPEGCNLFIYHLPQEFGDNELMQMFLPFGSVISSKVFMDRATNQSKCFGFVSFDNPASAHAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 556 HSP 3 Score: 78.1814 bits (191), Expect = 8.963e-15 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL
Sbjct: 111 KLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKL 200
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Cavefish
Match: celf3a (cugbp, Elav-like family member 3a [Source:NCBI gene;Acc:57922]) HSP 1 Score: 163.696 bits (413), Expect = 7.553e-45 Identity = 81/148 (54.73%), Postives = 110/148 (74.32%), Query Frame = 2
Query: 407 KQAQHKGE-DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYL---ENLQQNTGYINPIATLA 838
K A +G DRKLF+GMLGKQ ++ DVR +F+P+G+IEECT+LR +G SKGCAFVKY + +EA AI A+HGS T+PGASSSLVVKFADTEKER R++QQ + G+I+P ++L +AY+Q L + L + Y++P+AT+A
Sbjct: 8 KPADSEGRGDRKLFVGMLGKQQSDADVRKMFEPFGSIEECTVLRGPDGVSKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRMQQVASQLGVISP-MSLHLGAYNAYTQALVQQQALVAQSAYLSPVATVA 154 HSP 2 Score: 160.614 bits (405), Expect = 1.120e-43 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GP+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQ AIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 287 GPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 376
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Cavefish
Match: si:dkey-205h23.2 (si:dkey-205h23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-101]) HSP 1 Score: 163.696 bits (413), Expect = 6.619e-44 Identity = 76/91 (83.52%), Postives = 82/91 (90.11%), Query Frame = 2
Query: 1397 PDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
P+G N+FIYHLPQEFGDAEL QMF PFG VISAKV++DRATNQSKCFGFVSFDN +SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 399 PEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 487 HSP 2 Score: 147.517 bits (371), Expect = 4.317e-38 Identity = 72/142 (50.70%), Postives = 97/142 (68.31%), Query Frame = 2
Query: 422 KGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTG--------YINP 823
+GEDRKLF+GMLGKQ +E+DVR LF+ +G IEECT+LR +G SKGCAFVK+++ +EA AI +HG T+PGASSSLVVKFADT+KER R++ Q G+ +P +T+ AY+ + +QQ Y+NP
Sbjct: 137 RGEDRKLFVGMLGKQQSEEDVRRLFEAFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINTLHGGQTMPGASSSLVVKFADTDKERTMRRMHQMAGQLGIFSP-MTIQFGAYGAYTHAM--MQQQAALMAASQGSYLNP 275
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008846.1 (pep scaffold:Pmarinus_7.0:GL480623:147895:156346:1 gene:ENSPMAG00000008007.1 transcript:ENSPMAT00000008846.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.124 bits (357), Expect = 4.824e-41 Identity = 66/92 (71.74%), Postives = 78/92 (84.78%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GP+G+N+FIYHLPQEFGD +L Q F PFG+V+S+KV++D+ TN SKCFGFVS+DN SAQAAIQAMNGFQIG KRLKVQLKR K + KPY
Sbjct: 1 GPEGANLFIYHLPQEFGDQDLMQTFMPFGSVVSSKVFVDKQTNLSKCFGFVSYDNPISAQAAIQAMNGFQIGTKRLKVQLKRSK--NDSKPY 90
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002852.1 (pep scaffold:Pmarinus_7.0:GL477021:232626:260651:-1 gene:ENSPMAG00000002591.1 transcript:ENSPMAT00000002852.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 111.309 bits (277), Expect = 9.554e-28 Identity = 49/94 (52.13%), Postives = 71/94 (75.53%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQ 709
E+RKLFIGM+ K+ +E+D+R +F P+G +EEC +LR +G SKGCAF+ YT R+ A AI MH S T+ G ++ L VKFADT+K+++ ++LQQ
Sbjct: 142 EERKLFIGMISKKCSENDIRAMFSPFGQMEECRVLRGPDGQSKGCAFITYTARAMAQNAIKGMHQSQTMEGCAAPL-VKFADTQKDKEQKRLQQ 234 HSP 2 Score: 62.003 bits (149), Expect = 5.412e-11 Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGN---SKGCAFVKYTTRSEAYTAIGAMHGSMTIPG--ASSSLVVKFADTEKERQTRKL 703
K+F+G + + +E ++RDLF+ +G + E I+RD+ S+GC FV + TR A A A+H T+PG A + LV + + RKL
Sbjct: 53 KMFVGQIPRSWSEKELRDLFEQFGPVYEINIVRDRTQKPPQSRGCCFVTFYTRKAALEAQNALHNIKTLPGLHAPTELVPSTTSSSSSLEERKL 146
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007375.1 (pep scaffold:Pmarinus_7.0:GL478911:2009:38506:1 gene:ENSPMAG00000006638.1 transcript:ENSPMAT00000007375.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 85.8853 bits (211), Expect = 3.328e-18 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 2
Query: 365 EKKPATNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPY------GAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRK 700
+ KPA + + M E+RKLFIGML KQ +E DVR +F P+ G T+L K C F+ + TR A AI +MH S T+ G SS++VVKFADT+K+++ RK
Sbjct: 94 QMKPADSEKSSGM--------EERKLFIGMLSKQLSEADVRVIFSPFVGENPLGGAPLDTVL-------KWCGFITFATRMMAQNAIKSMHHSQTMEGCSSAVVVKFADTQKDKEQRK 196 HSP 2 Score: 71.633 bits (174), Expect = 1.141e-13 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQN---GNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFIN 718
K+F+G + + E ++R+LF+ +GA+ E +LRD+ S+GC FV Y TR A A ++H T+PG + +K AD+EK + + FI
Sbjct: 18 KMFVGQIPRSWGESELRELFEQFGAVHEVNVLRDRTQTPAVSRGCCFVTYCTRKAALEAQSSLHNIKTLPGMYHPIQMKPADSEKSSGMEERKLFIG 114
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007448.1 (pep scaffold:Pmarinus_7.0:GL479027:131562:138944:-1 gene:ENSPMAG00000006727.1 transcript:ENSPMAT00000007448.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 62.7734 bits (151), Expect = 3.174e-12 Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 2
Query: 1406 SNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMN--GFQIGMKR 1618
+N++I LP D +L ++ P+G ++S K +D+ TNQ K +GFV FD+ +AQ A+ A+ G Q M +
Sbjct: 55 TNLYIRGLPPHTSDQDLVKLCHPYGKIVSTKAILDKTTNQCKGYGFVDFDSPTAAQKAVTALKATGIQAQMAK 127
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008168.1 (pep scaffold:Pmarinus_7.0:GL476829:41182:80090:-1 gene:ENSPMAG00000007358.1 transcript:ENSPMAT00000008168.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 61.2326 bits (147), Expect = 2.744e-10 Identity = 28/79 (35.44%), Postives = 46/79 (58.23%), Query Frame = 2
Query: 1406 SNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRP 1642
+N++I LP D +L ++ P+G ++S K +D+ TNQ K +GFV FD ++AQ A+ A+ I + K Q + P
Sbjct: 35 TNLYIRGLPPGTTDQDLVKLCQPYGKIVSTKAILDKTTNQCKGYGFVDFDGPSAAQKAVTALKASGIQAQMAKQQEQDP 113
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Yeast
Match: NAM8 (RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function [Source:SGD;Acc:S000001128]) HSP 1 Score: 57.3806 bits (137), Expect = 3.425e-9 Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 2
Query: 1355 VQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKR 1639
VQQ+ F T P+ + VFI L + EL F PFGT++ K+ + KC GFV + + SA+AAI M GF I R+++ R
Sbjct: 298 VQQQPSLNHF--TDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPV------GKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 55.8398 bits (133), Expect = 8.177e-9 Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 2
Query: 1412 VFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQI 1606
+F+ L D L + F G VI A+V +R T++S+ +G+V F+N + A+ AIQ M G +I
Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 234
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 53.1434 bits (126), Expect = 6.996e-8 Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = 2
Query: 1310 LNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKR 1639
L+ + ++A+ Q K G I G G +V P+EF + FS +GT+I A++ +D+ T QS+ FGFV++D++++ Q N F I K K+++KR
Sbjct: 223 LDGKVIDPKRAIPRDEQDKTGK---IFVGGIGPDV----RPKEF-----EEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQ--NKF-IDFKDRKIEIKR 317
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Yeast
Match: NOP15 (Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm [Source:SGD;Acc:S000005054]) HSP 1 Score: 50.0618 bits (118), Expect = 2.336e-7 Identity = 25/86 (29.07%), Postives = 47/86 (54.65%), Query Frame = 2
Query: 1412 VFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+++ LP F + EL++ F+ FG + ++ ++ T S+ +GF+ F N A A ++MN + + L+V++ PKG K Y
Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRV-LPKGAKIEKLY 177
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Yeast
Match: IST3 (Component of the U2 snRNP; required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing; diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids [Source:SGD;Acc:S000001444]) HSP 1 Score: 48.1358 bits (113), Expect = 3.675e-7 Identity = 23/84 (27.38%), Postives = 47/84 (55.95%), Query Frame = 2
Query: 1400 DGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQ--LKRPK 1645
D + ++I +L +E + ++ +FS +G + + D T +S+ F ++ +++ S A+ +NGF+IG + LK+ RPK
Sbjct: 29 DNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHTFYRPK 112
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Nematostella
Match: EDO29519 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3E7]) HSP 1 Score: 150.599 bits (379), Expect = 5.981e-43 Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GPDGSN+FIYHLPQEF DA+L Q F PFGTVISAKV+ID+ TN SKCFGFVS+DN SAQ AIQ MNGFQIG KRLKVQLKRPK D +PY
Sbjct: 70 GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK--DANRPY 159
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Nematostella
Match: EDO35559 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SL64]) HSP 1 Score: 151.754 bits (382), Expect = 8.608e-41 Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GPDGSN+FIYHLPQEF DA+L Q F PFGTVISAKV+ID+ TN SKCFGFVS+DN SAQ AIQ MNGFQIG KRLKVQLKRPK D +PY
Sbjct: 294 GPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK--DANRPY 383 HSP 2 Score: 86.2705 bits (212), Expect = 3.064e-18 Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTI 634
+DRKLF+GM+ K E+D+R +F P+G IEE T+LR+ + SKGCAF+K+ R +A AI MH S T+
Sbjct: 83 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTM 151 HSP 3 Score: 53.9138 bits (128), Expect = 9.040e-8 Identity = 41/141 (29.08%), Postives = 62/141 (43.97%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGA----MHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTL----SALGGSAYSQYLENLQQNTGYINPIATL 835
KLF+G + + E D+R +F+PYG I E TIL+D KYT + + + A A +H T+PG + K + L+ +PFG I L S G A+ ++ +Q N IAT+
Sbjct: 21 KLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKD-----------KYTGQHKGWDACNAAQKHLHEKKTLPGMDDRKLF-VGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQ----NAIATM 145
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Nematostella
Match: EDO30576 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T0E1]) HSP 1 Score: 152.525 bits (384), Expect = 1.808e-40 Identity = 81/132 (61.36%), Postives = 93/132 (70.45%), Query Frame = 2
Query: 1283 GLAPYNP--PTLNPITLLARQALSMQ-VQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
G+ PY+ PT+ QAL Q +Q + + GPDGSN+FIYHLPQEF DA+L Q F PFGTVISAKV+ID+ TN SKCFGFVS+DN SAQ AIQ MNGFQIG KRLKVQLKRPK D +PY
Sbjct: 332 GIQPYSAAFPTV------YNQALYQQTARQPQKEESHYTPGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK--DANRPY 455 HSP 2 Score: 120.939 bits (302), Expect = 1.537e-29 Identity = 57/115 (49.57%), Postives = 76/115 (66.09%), Query Frame = 2
Query: 422 KGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFIN----PFGLINPGLTLS 754
K +DRKLF+GM+ K E+D+R +F P+G IEE T+LR+ + SKGCAF+K+ R +A AI MH S T+ G SS LVVKFADTEKE+ +K+Q FG +PG L+
Sbjct: 104 KSDDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKMQHLAAFGGMAFGGASPGFPLA 218
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Nematostella
Match: EDO35562 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SL69]) HSP 1 Score: 85.5001 bits (210), Expect = 9.448e-21 Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 2
Query: 431 DRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTI 634
DRKLF+GM+ K E+D+R +F P+G IEE T+LR+ + SKGCAF+K+ R +A AI MH S T+
Sbjct: 1 DRKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTM 68
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Nematostella
Match: EDO34879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN30]) HSP 1 Score: 67.781 bits (164), Expect = 2.843e-12 Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 2
Query: 440 LFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQ 691
L+I L K E++V LFKP+G I +L+D +G +G FV++ R EA TAI ++ T+PG + L VKFA+ RQ
Sbjct: 98 LYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNK-TLPGTNVKLTVKFANPPNSRQ 180 HSP 2 Score: 62.7734 bits (151), Expect = 1.175e-10 Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 2
Query: 1391 TGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRP 1642
T + +N+ I ++P ++ ++F G V S K+ DRAT QS + FV++DN + A A++ MNG ++ K LKV RP
Sbjct: 5 TSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARP 88 HSP 3 Score: 53.1434 bits (126), Expect = 1.548e-7 Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 2
Query: 1397 PDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPK 1645
P G +F+Y LPQE L ++FSP+G + + ++ +D+ +GFV+ N A AI +NG K L+V K PK
Sbjct: 252 PQGWCIFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKG------YGFVNMSNYEEACHAICCLNGTPQHGKILQVSFKTPK 328 HSP 4 Score: 51.2174 bits (121), Expect = 5.612e-7 Identity = 25/77 (32.47%), Postives = 44/77 (57.14%), Query Frame = 2
Query: 1406 SNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLK 1636
+N++I LP++ + E+ +F PFG +I++KV D + + + GFV FD AQ AI +N + +K+ +K
Sbjct: 96 ANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLTVK 171
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Medaka
Match: celf5b (CUGBP Elav-like family member 5 [Source:NCBI gene;Acc:101171069]) HSP 1 Score: 308.916 bits (790), Expect = 4.255e-98 Identity = 196/436 (44.95%), Postives = 252/436 (57.80%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQ------QNTGYINPIATLAXXXXXXXXXXXXIALGATL-----PYTLSTGIPTNDANASQNFLGVNPLAAAVAAS-QNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQM-----NDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
++ +GEDRKLF+GML KQ TE+DV LF+PYG IEECT+LR +GNSKGCAFVK++ +EA +AIGA+HGS T+PGASSSLVVKFADT+KER R++QQ + FG+ NP + AL S YS Y Q + GY+ P +A AT P +++ PT + P++A +++ N+TT ++ PS TPI++ T + P+V +T NG L P+S + A+ L A G + P TL PI+ QA + QQ++ ++ GP+G N+FIYHLPQEFGD EL QMF PFGTVIS+KV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 158 SESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAI---ALPFSTYSSYAHAQQAAIMAASHGGYLTP----------------SVAFPATQIHQMGPLNINSLPPTP----------MTPVSAGLSSPPANITTSAV--PSIV--------------------TPIVNGFTGIPHQPNGHPAVETVYT---NG------LPPYSTQSPNAADTLQQ------AFTGVQQYTAIYPAT--TLTPISQTLPQAPQVIQQQQQQQRE----GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 519
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Medaka
Match: celf5b (CUGBP Elav-like family member 5 [Source:NCBI gene;Acc:101171069]) HSP 1 Score: 304.294 bits (778), Expect = 5.747e-97 Identity = 194/433 (44.80%), Postives = 246/433 (56.81%), Query Frame = 2
Query: 428 EDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQ---------NTGYINPIATLAXXXXXXXXXXXXIALGATL-----PYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQM-----NDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+DRKLF+GML KQ TE+DV LF+PYG IEECT+LR +GNSKGCAFVK++ +EA +AIGA+HGS T+PGASSSLVVKFADT+KER R++QQ + FG+ NP + AL S YS Y L Q + GY+ P +A AT P +++ PT + P++ + N+TT ++ PS TPI++ T + P+V +T NG L P+S + A+ L A G + P TL PI+ QA + QQ++ ++ GP+G N+FIYHLPQEFGD EL QMF PFGTVIS+KV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 118 KDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPAI---ALPFSTYSSYAHALMQQQAAIMAASHGGYLTP----------------SVAFPATQIHQMGPLNINSLPPTP----------MTPVSGLSSPPANITTSAV--PSIV--------------------TPIVNGFTGIPHQPNGHPAVETVYT---NG------LPPYSTQSPNAADTLQQ------AFTGVQQYTAIYPAT--TLTPISQTLPQAPQVIQQQQQQQRE----GPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DASRPY 476 HSP 2 Score: 69.707 bits (169), Expect = 3.456e-12 Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 2
Query: 320 TFTETHIDDCFENKDEKKPATNNSN---CKMSKQAQHKGEDR-KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRK-LQQFINPFGLINPGLTLSALGGSA 772
T +E D +N P N + C + K +D KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + F ++QT + + + P+G+I L G++
Sbjct: 5 TNSEFRFDLRHQNPQNPSPKPMNGSEPICIHPESGAMKDQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGVKDRKL--FVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNS 159
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Medaka
Match: celf3b (CUGBP Elav-like family member 3 [Source:NCBI gene;Acc:101160192]) HSP 1 Score: 296.59 bits (758), Expect = 8.108e-94 Identity = 194/425 (45.65%), Postives = 246/425 (57.88%), Query Frame = 2
Query: 422 KGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYL-------ENLQQNTGYINPIATLAXXXXXXXXXXXXIALGAT--LPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+GEDRKLF+GMLGKQ T++DVR LF+P+G I+ECT+LR +G SKGCAFVK+ +EA AI ++HGS T+PGASSSLVVKFADTEKER R++QQ + G+ +P +TL+ +AY+Q + + L + Y++P+AT+A QQ+ + AT P T S+G T A A+ P+ A +P GMN V P ++ Q N H + P L P A A ++ A+ PA YG L G P TL+A+Q Q QQ+ GP+G N+FIYHLPQEF D+E+ QMF PFG VISAKV++DRATNQSKCFGFVSFDN SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 124 RGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDECTVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRMQQVASQLGIFSP-MTLNFPAYNAYTQAVNAQLVQHQALVAQSAYLSPVATVAAVQMQQMAALNANGIIATPITPITPSSGTNTPPAIAA------TPVPA-----------------------LPPPIGMNGYSSV----PAPTNGQQTETLYTNGVHQYQAQS---PAALDPLQQAYAGMQHYTAA----YPAAYG---LVGQ-----PFPQQQTLVAQQHQQPQQQQQR-------EGPEGCNIFIYHLPQEFSDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 490 HSP 2 Score: 75.0998 bits (183), Expect = 5.633e-14 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL--------------QQFINPFGLINPGLTLSALGGSA 772
KLF+G + + E D++ +F+ +G I E T+++D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL ++ PFG I+ L G++
Sbjct: 41 KLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDECTVLRGPDGTS 167
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Medaka
Match: si:dkey-205h23.2 (CUGBP Elav-like family member 6 [Source:NCBI gene;Acc:101171151]) HSP 1 Score: 166.392 bits (420), Expect = 7.996e-45 Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GP+G N+FIYHLPQEFGDAEL QMF PFG VISAKV++DRATNQSKCFGFVSFDN +SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 393 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 482 HSP 2 Score: 150.984 bits (380), Expect = 2.791e-39 Identity = 68/127 (53.54%), Postives = 95/127 (74.80%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP-GLTLSALGGSAYSQYLE 790
++ +GEDRKLF+GMLGKQ +EDDVR LF+ +G IEECT+LR +G SKGCAFVK+++ +EA AI ++HG T+PGASSSLVVKFADT+KER R++ Q G+ +P + A G +++Q ++
Sbjct: 123 SEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFSPMTIQFGAYGTYSHAQMMQ 249 HSP 3 Score: 75.8702 bits (185), Expect = 3.564e-14 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKL 132
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Medaka
Match: si:dkey-205h23.2 (CUGBP Elav-like family member 6 [Source:NCBI gene;Acc:101171151]) HSP 1 Score: 166.392 bits (420), Expect = 7.996e-45 Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 2
Query: 1394 GPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
GP+G N+FIYHLPQEFGDAEL QMF PFG VISAKV++DRATNQSKCFGFVSFDN +SAQAAIQAMNGFQIGMKRLKVQLKRPK D +PY
Sbjct: 393 GPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQAAIQAMNGFQIGMKRLKVQLKRPK--DANRPY 482 HSP 2 Score: 150.984 bits (380), Expect = 2.791e-39 Identity = 68/127 (53.54%), Postives = 95/127 (74.80%), Query Frame = 2
Query: 413 AQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINP-GLTLSALGGSAYSQYLE 790
++ +GEDRKLF+GMLGKQ +EDDVR LF+ +G IEECT+LR +G SKGCAFVK+++ +EA AI ++HG T+PGASSSLVVKFADT+KER R++ Q G+ +P + A G +++Q ++
Sbjct: 123 SEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFSPMTIQFGAYGTYSHAQMMQ 249 HSP 3 Score: 75.8702 bits (185), Expect = 3.564e-14 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 437 KLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
KLFIG + + E D++ LF+ +G I E T+L+D+ G KGCAF+ Y R A A A+H T+PG + + VK AD+E + RKL
Sbjct: 43 KLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKL 132
BLAST of Trinucleotide repeat containing 4-like protein vs. Planmine SMEST
Match: SMESG000005424.1 (SMESG000005424.1) HSP 1 Score: 923.694 bits (2386), Expect = 0.000e+0 Identity = 459/460 (99.78%), Postives = 459/460 (99.78%), Query Frame = 2
Query: 290 MIFQKETEQSTFTETHIDDCFENKDEKKPATNNSNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
MIFQKETEQSTFTETHIDDCFENKDEKKPATNNSNCKMSKQ QHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLALQLQQQLQQQQQIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY
Sbjct: 1 MIFQKETEQSTFTETHIDDCFENKDEKKPATNNSNCKMSKQTQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLALQLQQQLQQQQQIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 460
BLAST of Trinucleotide repeat containing 4-like protein vs. Planmine SMEST
Match: SMESG000005424.1 (SMESG000005424.1) HSP 1 Score: 842.417 bits (2175), Expect = 0.000e+0 Identity = 422/423 (99.76%), Postives = 422/423 (99.76%), Query Frame = 2
Query: 401 MSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
MSKQ QHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLALQLQQQLQQQQQIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY
Sbjct: 1 MSKQTQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINPIATLALQLQQQLQQQQQIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 423
BLAST of Trinucleotide repeat containing 4-like protein vs. Planmine SMEST
Match: SMESG000026947.1 (SMESG000026947.1) HSP 1 Score: 331.643 bits (849), Expect = 7.694e-107 Identity = 205/436 (47.02%), Postives = 261/436 (59.86%), Query Frame = 2
Query: 410 QAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQ-YLENLQQNTGYINPIATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLSPSTAASMMMPNNSGMNTMCQVQQQTPI------------ISSATQMNDPSVNISHT--QMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLA-PYNPPTLNPITLLARQALSMQVQQKEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKGGDTGKPY 1669
+ + K E+RKLF+GML K TE+DVR LFK +G IEECT+LRDQNGNSKGCAFVK++++ EA AI A+HGS T+ GASSS+VVKFADTEKERQTRKLQQ INP L+N L L+ LGG+ Y Q L+N NP+A L+ QLQQ + TG+ N N ++P+AA AA LLSP ++ N+G N + Q I+ A+Q ++ V H+ Q+SN N++ + A G ++S T + Y + G+A P PI + LS+ V QK+ KD +GP+ N+FIYHLP EFGD +L QMFSPFG + SAKVY+DRATNQSKCFGFVS+ N AQAAIQAMNGFQ+G+KRLKVQLKRPK D+ KPY
Sbjct: 124 KEERKTEERKLFVGMLNKNQTEEDVRRLFKSFGEIEECTVLRDQNGNSKGCAFVKFSSQVEALAAISALHGSQTMQGASSSIVVKFADTEKERQTRKLQQLINPLNLMNSSLALAQLGGNIYGQTILDNQLSPPRIFNPVAALSFQLQQTSGLPSLAGI---------TGLSINPTNGQAY---IDPVAANTAA--------LLSPLLGSAQAFHINTGANYLTQNPNGPSFAMITNPGFSNSSIAMASQNHNLPVTAIHSSAQISNLSDSCVNVSLYQNACLGGQFVNTNSSATSDSSYHSIPAFGIAFPA------PIGQFGQSGLSLTVPQKDLEKDMGGSGPEDCNLFIYHLPPEFGDHDLLQMFSPFGAITSAKVYVDRATNQSKCFGFVSYTNVAFAQAAIQAMNGFQLGLKRLKVQLKRPK-SDSIKPY 532 HSP 2 Score: 72.7886 bits (177), Expect = 2.551e-13 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 2
Query: 389 SNCKMSKQAQHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQ-NGNSKGCAFVKYTTRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 703
SN K + + KLF+G + + E D+R +F+ YG I E +ILRD+ G KGCAF+ Y R + A+H ++PG + L VK A E++ + RKL
Sbjct: 29 SNGKSTSVLSKDSDAIKLFVGQIPRSLQESDLRPMFEEYGQIYEFSILRDKVTGIHKGCAFLTYCHRQSSEACQRALHDQKSLPGMARPLQVKPAKEERKTEERKL 134
BLAST of Trinucleotide repeat containing 4-like protein vs. Planmine SMEST
Match: SMESG000021009.1 (SMESG000021009.1) HSP 1 Score: 261.151 bits (666), Expect = 2.190e-81 Identity = 178/425 (41.88%), Postives = 224/425 (52.71%), Query Frame = 2
Query: 416 QHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHG---SMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINP-IATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLS-PSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQ-------ALSMQVQQ--KEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKG 1648
Q+ E+ KLFIGML K +EDDVR L +PYG I+ C IL+D GNSKGCAFV Y EA AI +++G SM P S +V + AD E+ERQ RK+Q L+ P QN GY N I + QQ + L LS N V +S ++T Q + P +AA+ + N MN I + +N +N +H Q+ N N TP +L LP++Y CG N P L L+ Q ALS+Q QQ K+G KD I+TGP+G N+FIYHLPQ+FGDA LAQ+F+PFG VISAKVY+DRATNQSKCFGFVSFDN+++A+AAI+ MNGFQIG KRLKVQLKRPKG
Sbjct: 28 QNHDENTKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGNSKGCAFVTYNNSDEANMAIESLNGMKTSMACPELGSCIVARLADNEQERQLRKMQMQFPAIQLLTP--------------------QNVGYYNQGIVPMIQFPHATDQQTANLINAYALQMHLSQ------------MYSPNLTPPLVNSSPSVTPQPQIGVPMSAANDISSNQCSMNHFVLPSINNENIPLSPALNS-YINPAHPQLINIANI--NFTPEALH--------------LPSLYSMFPQCGFN-LNTPALG----LSGQNIYPNTTALSLQYQQNQKDGIKDNIVTGPEGCNLFIYHLPQDFGDAALAQLFTPFGNVISAKVYLDRATNQSKCFGFVSFDNASNAEAAIRGMNGFQIGTKRLKVQLKRPKG 398
BLAST of Trinucleotide repeat containing 4-like protein vs. Planmine SMEST
Match: SMESG000021009.1 (SMESG000021009.1) HSP 1 Score: 259.225 bits (661), Expect = 1.524e-80 Identity = 180/426 (42.25%), Postives = 229/426 (53.76%), Query Frame = 2
Query: 416 QHKGEDRKLFIGMLGKQHTEDDVRDLFKPYGAIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIGAMHG---SMTIPGASSSLVVKFADTEKERQTRKLQQFINPFGLINPGLTLSALGGSAYSQYLENLQQNTGYINP--IATLAXXXXXXXXXXXXIALGATLPYTLSTGIPTNDANASQNFLGVNPLAAAVAASQNLTTQSLLS-PSTAASMMMPNNSGMNTMCQVQQQTPIISSATQMNDPSVNISHTQMSNGQTRPQNLTPFSLAAATGANWLASNSTTLPAMYGGLNLCGLAPYNPPTLNPITLLARQ-------ALSMQVQQ--KEGTKDFILTGPDGSNVFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQSKCFGFVSFDNSNSAQAAIQAMNGFQIGMKRLKVQLKRPKG 1648
Q+ E+ KLFIGML K +EDDVR L +PYG I+ C IL+D GNSKGCAFV Y EA AI +++G SM P S +V + AD E+ERQ RK+Q L+ P QN GY N + + Q QQ + A Y L + SQ + N V +S ++T Q + P +AA+ + N MN I + +N +N +H Q+ N N TP +L LP++Y CG N P L L+ Q ALS+Q QQ K+G KD I+TGP+G N+FIYHLPQ+FGDA LAQ+F+PFG VISAKVY+DRATNQSKCFGFVSFDN+++A+AAI+ MNGFQIG KRLKVQLKRPKG
Sbjct: 28 QNHDENTKLFIGMLNKNQSEDDVRQLCEPYGCIKNCMILKDSYGNSKGCAFVTYNNSDEANMAIESLNGMKTSMACPELGSCIVARLADNEQERQLRKMQMQFPAIQLLTP--------------------QNVGYYNQGIVPMILQQFPHATDQQTANLINA---YALQMHL-------SQMY-SPNLTPPLVNSSPSVTPQPQIGVPMSAANDISSNQCSMNHFVLPSINNENIPLSPALNS-YINPAHPQLINIANI--NFTPEALH--------------LPSLYSMFPQCGFN-LNTPALG----LSGQNIYPNTTALSLQYQQNQKDGIKDNIVTGPEGCNLFIYHLPQDFGDAALAQLFTPFGNVISAKVYLDRATNQSKCFGFVSFDNASNAEAAIRGMNGFQIGTKRLKVQLKRPKG 400 The following BLAST results are available for this feature:
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Trinucleotide repeat containing 4-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30011420 ID=SMED30011420|Name=Trinucleotide repeat containing 4-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1726bpback to top protein sequence of SMED30011420-orf-1 >SMED30011420-orf-1 ID=SMED30011420-orf-1|Name=SMED30011420-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=461bp MIFQKETEQSTFTETHIDDCFENKDEKKPATNNSNCKMSKQAQHKGEDRKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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