Histone H2A
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30011413 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Histone H2A vs. Ensembl Human
Match: H2AC20 (H2A clustered histone 20 [Source:HGNC Symbol;Acc:HGNC:4738]) HSP 1 Score: 145.206 bits (365), Expect = 1.492e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Human
Match: H2AJ (H2A.J histone [Source:HGNC Symbol;Acc:HGNC:14456]) HSP 1 Score: 145.206 bits (365), Expect = 1.626e-42 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Human
Match: H2AJ (H2A.J histone [Source:HGNC Symbol;Acc:HGNC:14456]) HSP 1 Score: 145.206 bits (365), Expect = 1.626e-42 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Human
Match: H2AC19 (H2A clustered histone 19 [Source:HGNC Symbol;Acc:HGNC:29668]) HSP 1 Score: 145.206 bits (365), Expect = 2.145e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Human
Match: H2AC18 (H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736]) HSP 1 Score: 145.206 bits (365), Expect = 2.145e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-35 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:Q27485]) HSP 1 Score: 130.568 bits (327), Expect = 2.409e-37 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL VTIAQGGVLPNIQ Sbjct: 23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-35 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:Q27485]) HSP 1 Score: 130.568 bits (327), Expect = 2.409e-37 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL VTIAQGGVLPNIQ Sbjct: 23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-57 (Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588]) HSP 1 Score: 130.954 bits (328), Expect = 3.361e-37 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL VTIAQGGVLPNIQ Sbjct: 23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-68 (Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588]) HSP 1 Score: 130.183 bits (326), Expect = 3.496e-37 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL VTIAQGGVLPNIQ Sbjct: 23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-65 (Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588]) HSP 1 Score: 130.183 bits (326), Expect = 3.496e-37 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL VTIAQGGVLPNIQ Sbjct: 23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33850 (gene:FBgn0053850 transcript:FBtr0091854) HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQ Sbjct: 21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33847 (gene:FBgn0053847 transcript:FBtr0091851) HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQ Sbjct: 21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33844 (gene:FBgn0053844 transcript:FBtr0091848) HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQ Sbjct: 21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33832 (gene:FBgn0053832 transcript:FBtr0091836) HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQ Sbjct: 21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33826 (gene:FBgn0053826 transcript:FBtr0091830) HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL VTIAQGGVLPNIQ Sbjct: 21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1]) HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1]) HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1]) HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1]) HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1]) HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Xenopus
Match: ENSXETT00000010097.1 (H2A.X variant histone [Source:NCBI gene;Acc:100487455]) HSP 1 Score: 145.976 bits (367), Expect = 1.292e-42 Identity = 97/113 (85.84%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GKA T++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKAVSKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Xenopus
Match: mid1 (midline 1 [Source:Xenbase;Acc:XB-GENE-494584]) HSP 1 Score: 143.665 bits (361), Expect = 6.587e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG+VTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Xenopus
Match: H2AX (histone H2A type 2-B [Source:NCBI gene;Acc:100486672]) HSP 1 Score: 143.28 bits (360), Expect = 7.532e-42 Identity = 95/113 (84.07%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK+G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKSGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Xenopus
Match: h2afx.2 (H2A histone family member X, gene 2 [Source:NCBI gene;Acc:548722]) HSP 1 Score: 143.28 bits (360), Expect = 1.381e-41 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G T++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Xenopus
Match: ENSXETT00000000447.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:124390910:124391717:1 gene:ENSXETG00000000090.1 transcript:ENSXETT00000000447.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.895 bits (359), Expect = 1.769e-41 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G T++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2ac20 (H2A clustered histone 20 [Source:MGI Symbol;Acc:MGI:2448316]) HSP 1 Score: 145.206 bits (365), Expect = 1.024e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2ac18 (H2A clustered histone 18 [Source:MGI Symbol;Acc:MGI:96097]) HSP 1 Score: 145.206 bits (365), Expect = 1.472e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2ac19 (H2A clustered histone 19 [Source:MGI Symbol;Acc:MGI:2448283]) HSP 1 Score: 145.206 bits (365), Expect = 1.472e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2aj (H2J.A histone [Source:MGI Symbol;Acc:MGI:3606192]) HSP 1 Score: 144.05 bits (362), Expect = 3.509e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2aj (H2J.A histone [Source:MGI Symbol;Acc:MGI:3606192]) HSP 1 Score: 143.665 bits (361), Expect = 4.507e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q64523|H2A2C_MOUSE (Histone H2A type 2-C OS=Mus musculus OX=10090 GN=H2ac20 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 7.166e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q16777|H2A2C_HUMAN (Histone H2A type 2-C OS=Homo sapiens OX=9606 GN=H2AC20 PE=1 SV=4) HSP 1 Score: 145.206 bits (365), Expect = 7.166e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|A1A4R1|H2A2C_BOVIN (Histone H2A type 2-C OS=Bos taurus OX=9913 GN=H2AC20 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.166e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q9BTM1|H2AJ_HUMAN (Histone H2A.J OS=Homo sapiens OX=9606 GN=H2AJ PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.807e-42 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q3ZBX9|H2AJ_BOVIN (Histone H2A.J OS=Bos taurus OX=9913 GN=H2AJ PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.807e-42 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. TrEMBL
Match: G1NSF5 (Histone H2A OS=Myotis lucifugus OX=59463 GN=HIST2H2AC PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.000e-41 Identity = 99/120 (82.50%), Postives = 111/120 (92.50%), Query Frame = 1 Query: 379 SFNSF-LMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 SF SF +MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 SFISFAVMSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 120
BLAST of Histone H2A vs. TrEMBL
Match: G1MMV7 (Histone H2A OS=Ailuropoda melanoleuca OX=9646 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.929e-41 Identity = 99/119 (83.19%), Postives = 110/119 (92.44%), Query Frame = 1 Query: 379 SFNSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 + N F MS +GK G T++++KTRSSRAGLQFPVGR+HR LRKGN++ERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 2 ALNCFSMSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 120
BLAST of Histone H2A vs. TrEMBL
Match: F6ZAW4 (Histone H2A OS=Ornithorhynchus anatinus OX=9258 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 8.503e-41 Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 1 Query: 382 FNSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 F SF MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 6 FFSFNMSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 123
BLAST of Histone H2A vs. TrEMBL
Match: R0LLY2 (Histone H2A (Fragment) OS=Anas platyrhynchos OX=8839 GN=Anapl_01021 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.550e-41 Identity = 97/117 (82.91%), Postives = 109/117 (93.16%), Query Frame = 1 Query: 385 NSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 NS +MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 1 NSRVMSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 117
BLAST of Histone H2A vs. TrEMBL
Match: Q64426 (Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.104e-40 Identity = 97/119 (81.51%), Postives = 109/119 (91.60%), Query Frame = 1 Query: 379 SFNSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 S +F+MS GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ Sbjct: 2 SVCAFVMSGLGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 120
BLAST of Histone H2A vs. Ensembl Cavefish
Match: h2ax (H2A.X variant histone [Source:NCBI gene;Acc:394048]) HSP 1 Score: 144.05 bits (362), Expect = 3.287e-42 Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G +++SKTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG+VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKSKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000026274.2 (pep primary_assembly:Astyanax_mexicanus-2.0:21:10145526:10150789:1 gene:ENSAMXG00000025549.2 transcript:ENSAMXT00000026274.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.51 bits (358), Expect = 1.158e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000025817.2 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000522.1:47764:48404:-1 gene:ENSAMXG00000025091.2 transcript:ENSAMXT00000025817.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 137.117 bits (344), Expect = 1.130e-39 Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 1 Query: 409 GKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 7 GKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 115
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000040985.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:27523804:27524807:1 gene:ENSAMXG00000035879.1 transcript:ENSAMXT00000040985.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 135.961 bits (341), Expect = 3.392e-39 Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 24 AGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 115
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000050088.1 (pep primary_assembly:Astyanax_mexicanus-2.0:21:10166233:10171033:1 gene:ENSAMXG00000038836.1 transcript:ENSAMXT00000050088.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 135.576 bits (340), Expect = 5.134e-39 Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 25 AGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 116
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011253.1 (pep scaffold:Pmarinus_7.0:GL479154:926813:927238:-1 gene:ENSPMAG00000010226.1 transcript:ENSPMAT00000011253.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 143.28 bits (360), Expect = 1.335e-42 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005338.1 (pep scaffold:Pmarinus_7.0:GL476820:708214:709027:-1 gene:ENSPMAG00000004859.1 transcript:ENSPMAT00000005338.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 140.584 bits (353), Expect = 1.381e-41 Identity = 92/113 (81.42%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G +++++K+RSSRAGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKL+G VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKSRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002388.1 (pep scaffold:Pmarinus_7.0:GL476925:193851:194294:1 gene:ENSPMAG00000002177.1 transcript:ENSPMAT00000002388.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 139.813 bits (351), Expect = 2.141e-41 Identity = 92/113 (81.42%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G +++++K+RSSRAGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKL+G VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKSRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008684.1 (pep scaffold:Pmarinus_7.0:GL488596:2418:2939:-1 gene:ENSPMAG00000007861.1 transcript:ENSPMAT00000008684.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 138.272 bits (347), Expect = 1.249e-40 Identity = 91/113 (80.53%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G +++++K+ SSRAGLQFPVGRIHR LRKGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPR+LQLA+RNDEELNKL+G VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKSRAKAKSHSSRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRNLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011166.1 (pep scaffold:Pmarinus_7.0:GL476820:1027708:1028088:1 gene:ENSPMAG00000010139.1 transcript:ENSPMAT00000011166.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 137.502 bits (345), Expect = 1.427e-40 Identity = 91/113 (80.53%), Postives = 106/113 (93.81%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G +++++K+RSSRAGLQFPVGR+HR L KGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKL+G VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKSRAKAKSRSSRAGLQFPVGRVHRLLCKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Yeast
Match: HTA2 (Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical (see also HTA1) subtypes; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p [Source:SGD;Acc:S000000099]) HSP 1 Score: 127.872 bits (320), Expect = 6.866e-37 Identity = 78/92 (84.78%), Postives = 87/92 (94.57%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGL FPVGR+HR LR+GN+A+R+G+GAPVYL AVLEYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRND+ELNKLLG VTIAQGGVLPNI Sbjct: 23 AGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIH 114
BLAST of Histone H2A vs. Ensembl Yeast
Match: HTA1 (Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p; N-terminally propionylated in vivo [Source:SGD;Acc:S000002633]) HSP 1 Score: 127.872 bits (320), Expect = 6.866e-37 Identity = 78/92 (84.78%), Postives = 87/92 (94.57%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGL FPVGR+HR LR+GN+A+R+G+GAPVYL AVLEYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRND+ELNKLLG VTIAQGGVLPNI Sbjct: 23 AGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIH 114
BLAST of Histone H2A vs. Ensembl Yeast
Match: HTZ1 (Histone variant H2AZ; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling [Source:SGD;Acc:S000005372]) HSP 1 Score: 78.1814 bits (191), Expect = 2.713e-18 Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKL-RKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNI 732 AGLQFPVGRI R L R RVG+ A +YL AVLEYL AEVLELAGNAA+D K RI PRHLQLAIR D+EL+ L+ + TIA GGVLP+I Sbjct: 29 AGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHI 119
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO31130 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SYT5]) HSP 1 Score: 137.117 bits (344), Expect = 3.699e-40 Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK GK+ + AGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKGGKSRAKGKSRSAR-AGLQFPVGRVHRFLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO26088 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7TCX1]) HSP 1 Score: 136.732 bits (343), Expect = 5.095e-40 Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741 MS +GK GK ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL VTIAQGGVLPNIQ S Sbjct: 1 MSXRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO27766 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5]) HSP 1 Score: 136.732 bits (343), Expect = 5.980e-40 Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741 MS +GK GK ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL VTIAQGGVLPNIQ S Sbjct: 1 MSGRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO27764 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5]) HSP 1 Score: 136.732 bits (343), Expect = 5.980e-40 Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741 MS +GK GK ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL VTIAQGGVLPNIQ S Sbjct: 1 MSGRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO37980 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5]) HSP 1 Score: 136.732 bits (343), Expect = 5.980e-40 Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741 MS +GK GK ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL VTIAQGGVLPNIQ S Sbjct: 1 MSGRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000000848.2 (pep primary_assembly:ASM223467v1:14:15235538:15240676:1 gene:ENSORLG00000000686.2 transcript:ENSORLT00000000848.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.895 bits (359), Expect = 9.338e-42 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGAKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000036997.1 (pep primary_assembly:ASM223467v1:1:8896657:8898783:1 gene:ENSORLG00000027232.1 transcript:ENSORLT00000036997.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.895 bits (359), Expect = 1.181e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000043619.1 (pep primary_assembly:ASM223467v1:1:2176285:2181192:1 gene:ENSORLG00000022228.1 transcript:ENSORLT00000043619.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.51 bits (358), Expect = 1.235e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000038758.1 (pep primary_assembly:ASM223467v1:1:3981263:3984167:1 gene:ENSORLG00000028520.1 transcript:ENSORLT00000038758.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.51 bits (358), Expect = 1.356e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000042228.1 (pep primary_assembly:ASM223467v1:23:22958305:22963215:1 gene:ENSORLG00000027073.1 transcript:ENSORLT00000042228.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 142.51 bits (358), Expect = 1.465e-41 Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK G ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000006040.1 (SMESG000006040.1) HSP 1 Score: 160.999 bits (406), Expect = 5.086e-49 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741 MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS Sbjct: 1 MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 115
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000006040.1 (SMESG000006040.1) HSP 1 Score: 160.614 bits (405), Expect = 7.209e-49 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741 MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS Sbjct: 1 MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 115
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000067932.1 (SMESG000067932.1) HSP 1 Score: 144.436 bits (363), Expect = 1.363e-42 Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 1 Query: 397 MSAK-GKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS K GKAGKT+++QSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLG VTI+QGGV+PNIQ Sbjct: 1 MSGKAGKAGKTSRNQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTISQGGVIPNIQ 114
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000018807.1 (SMESG000018807.1) HSP 1 Score: 140.198 bits (352), Expect = 6.354e-41 Identity = 94/113 (83.19%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 MS +GK GK+ AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQ Sbjct: 1 MSGRGKGGKSRNKAKSRSVR-AGLQFPVGRIHRMLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGSVTIAQGGVLPNIQ 112
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000072071.1 (SMESG000072071.1) HSP 1 Score: 113.235 bits (282), Expect = 1.991e-30 Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = 1 Query: 460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735 AGL FPVGR+HR LRKG F ER+G GAPVY++A+LEYL AE+LELAGNAARDNKKSRI PRH+ LAI+ND EL++LL VTI+QGGV+PNIQ Sbjct: 24 AGLTFPVGRVHRLLRKGKFGERIGHGAPVYMSAILEYLTAEILELAGNAARDNKKSRIAPRHILLAIKNDSELSELLKSVTISQGGVMPNIQ 115 The following BLAST results are available for this feature:
BLAST of Histone H2A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Histone H2A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Histone H2A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Histone H2A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Histone H2A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of Histone H2A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Histone H2A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Histone H2A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30011413 ID=SMED30011413|Name=Histone H2A|organism=Schmidtea mediterranea sexual|type=transcript|length=1024bpback to top protein sequence of SMED30011413-orf-1 >SMED30011413-orf-1 ID=SMED30011413-orf-1|Name=SMED30011413-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=126bp MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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