Histone H2A

Overview
NameHistone H2A
Smed IDSMED30011413
Length (bp)1024
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Histone H2A (SMED30011413) t-SNE clustered cells

Violin plots show distribution of expression levels for Histone H2A (SMED30011413) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Histone H2A (SMED30011413) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Histone H2A (SMED30011413) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30011413

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
cephalic gangliaSMED30011413h1SMcG0014269 dd_Smed_v4_12365_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011413h1SMcG0014269 dd_Smed_v4_12365_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011413h1SMcG0014269 SMED_16914_V2_1GPL14150_gene_modelsPMID:22385657
Wagner et al., 2012		whole organism asexual adult cDNA to DNA expression microarray evidence
neoblastSMED30011413h1SMcG0014269 SMED_16914_V2_1GPL14150PMID:22385657
Wagner et al., 2012		whole organism asexual adult cDNA to DNA expression microarray evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Histone H2A vs. Ensembl Human
Match: H2AC20 (H2A clustered histone 20 [Source:HGNC Symbol;Acc:HGNC:4738])

HSP 1 Score: 145.206 bits (365), Expect = 1.492e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Human
Match: H2AJ (H2A.J histone [Source:HGNC Symbol;Acc:HGNC:14456])

HSP 1 Score: 145.206 bits (365), Expect = 1.626e-42
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Human
Match: H2AJ (H2A.J histone [Source:HGNC Symbol;Acc:HGNC:14456])

HSP 1 Score: 145.206 bits (365), Expect = 1.626e-42
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Human
Match: H2AC19 (H2A clustered histone 19 [Source:HGNC Symbol;Acc:HGNC:29668])

HSP 1 Score: 145.206 bits (365), Expect = 2.145e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Human
Match: H2AC18 (H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736])

HSP 1 Score: 145.206 bits (365), Expect = 2.145e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-35 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:Q27485])

HSP 1 Score: 130.568 bits (327), Expect = 2.409e-37
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
[Close]
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-35 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:Q27485])

HSP 1 Score: 130.568 bits (327), Expect = 2.409e-37
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
[Close]
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-57 (Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588])

HSP 1 Score: 130.954 bits (328), Expect = 3.361e-37
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
[Close]
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-68 (Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588])

HSP 1 Score: 130.183 bits (326), Expect = 3.496e-37
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
[Close]
BLAST of Histone H2A vs. Ensembl Celegans
Match: his-65 (Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P09588])

HSP 1 Score: 130.183 bits (326), Expect = 3.496e-37
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RI PRHLQLA+RNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   23 AGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQ 114
[Close]
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33850 (gene:FBgn0053850 transcript:FBtr0091854)

HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33847 (gene:FBgn0053847 transcript:FBtr0091851)

HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33844 (gene:FBgn0053844 transcript:FBtr0091848)

HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33832 (gene:FBgn0053832 transcript:FBtr0091836)

HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Ensembl Fly
Match: His2A:CG33826 (gene:FBgn0053826 transcript:FBtr0091830)

HSP 1 Score: 136.732 bits (343), Expect = 1.338e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAV+EYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQ
Sbjct:   21 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1])

HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1])

HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1])

HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1])

HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Zebrafish
Match: hist1h2a11 (histone cluster 1 H2A family member 11 [Source:ZFIN;Acc:ZDB-GENE-081205-1])

HSP 1 Score: 142.51 bits (358), Expect = 1.081e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Xenopus
Match: ENSXETT00000010097.1 (H2A.X variant histone [Source:NCBI gene;Acc:100487455])

HSP 1 Score: 145.976 bits (367), Expect = 1.292e-42
Identity = 97/113 (85.84%), Postives = 107/113 (94.69%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GKA   T++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKAVSKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Xenopus
Match: mid1 (midline 1 [Source:Xenbase;Acc:XB-GENE-494584])

HSP 1 Score: 143.665 bits (361), Expect = 6.587e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG+VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Xenopus
Match: H2AX (histone H2A type 2-B [Source:NCBI gene;Acc:100486672])

HSP 1 Score: 143.28 bits (360), Expect = 7.532e-42
Identity = 95/113 (84.07%), Postives = 107/113 (94.69%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK+G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKSGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Xenopus
Match: h2afx.2 (H2A histone family member X, gene 2 [Source:NCBI gene;Acc:548722])

HSP 1 Score: 143.28 bits (360), Expect = 1.381e-41
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G  T++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Xenopus
Match: ENSXETT00000000447.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:124390910:124391717:1 gene:ENSXETG00000000090.1 transcript:ENSXETT00000000447.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.895 bits (359), Expect = 1.769e-41
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G  T++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2ac20 (H2A clustered histone 20 [Source:MGI Symbol;Acc:MGI:2448316])

HSP 1 Score: 145.206 bits (365), Expect = 1.024e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2ac18 (H2A clustered histone 18 [Source:MGI Symbol;Acc:MGI:96097])

HSP 1 Score: 145.206 bits (365), Expect = 1.472e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2ac19 (H2A clustered histone 19 [Source:MGI Symbol;Acc:MGI:2448283])

HSP 1 Score: 145.206 bits (365), Expect = 1.472e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2aj (H2J.A histone [Source:MGI Symbol;Acc:MGI:3606192])

HSP 1 Score: 144.05 bits (362), Expect = 3.509e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Mouse
Match: H2aj (H2J.A histone [Source:MGI Symbol;Acc:MGI:3606192])

HSP 1 Score: 143.665 bits (361), Expect = 4.507e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q64523|H2A2C_MOUSE (Histone H2A type 2-C OS=Mus musculus OX=10090 GN=H2ac20 PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 7.166e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q16777|H2A2C_HUMAN (Histone H2A type 2-C OS=Homo sapiens OX=9606 GN=H2AC20 PE=1 SV=4)

HSP 1 Score: 145.206 bits (365), Expect = 7.166e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|A1A4R1|H2A2C_BOVIN (Histone H2A type 2-C OS=Bos taurus OX=9913 GN=H2AC20 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.166e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q9BTM1|H2AJ_HUMAN (Histone H2A.J OS=Homo sapiens OX=9606 GN=H2AJ PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.807e-42
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. UniProt/SwissProt
Match: sp|Q3ZBX9|H2AJ_BOVIN (Histone H2A.J OS=Bos taurus OX=9913 GN=H2AJ PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.807e-42
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. TrEMBL
Match: G1NSF5 (Histone H2A OS=Myotis lucifugus OX=59463 GN=HIST2H2AC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 5.000e-41
Identity = 99/120 (82.50%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:  379 SFNSF-LMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            SF SF +MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 SFISFAVMSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 120
[Close]
BLAST of Histone H2A vs. TrEMBL
Match: G1MMV7 (Histone H2A OS=Ailuropoda melanoleuca OX=9646 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 5.929e-41
Identity = 99/119 (83.19%), Postives = 110/119 (92.44%), Query Frame = 1 
Query:  379 SFNSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            + N F MS +GK G  T++++KTRSSRAGLQFPVGR+HR LRKGN++ERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    2 ALNCFSMSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 120
[Close]
BLAST of Histone H2A vs. TrEMBL
Match: F6ZAW4 (Histone H2A OS=Ornithorhynchus anatinus OX=9258 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 8.503e-41
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 1 
Query:  382 FNSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            F SF MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    6 FFSFNMSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 123
[Close]
BLAST of Histone H2A vs. TrEMBL
Match: R0LLY2 (Histone H2A (Fragment) OS=Anas platyrhynchos OX=8839 GN=Anapl_01021 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 9.550e-41
Identity = 97/117 (82.91%), Postives = 109/117 (93.16%), Query Frame = 1 
Query:  385 NSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            NS +MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    1 NSRVMSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 117
[Close]
BLAST of Histone H2A vs. TrEMBL
Match: Q64426 (Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.104e-40
Identity = 97/119 (81.51%), Postives = 109/119 (91.60%), Query Frame = 1 
Query:  379 SFNSFLMSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            S  +F+MS  GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ
Sbjct:    2 SVCAFVMSGLGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 120
[Close]
BLAST of Histone H2A vs. Ensembl Cavefish
Match: h2ax (H2A.X variant histone [Source:NCBI gene;Acc:394048])

HSP 1 Score: 144.05 bits (362), Expect = 3.287e-42
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   +++SKTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG+VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKSKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000026274.2 (pep primary_assembly:Astyanax_mexicanus-2.0:21:10145526:10150789:1 gene:ENSAMXG00000025549.2 transcript:ENSAMXT00000026274.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.51 bits (358), Expect = 1.158e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000025817.2 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000522.1:47764:48404:-1 gene:ENSAMXG00000025091.2 transcript:ENSAMXT00000025817.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 137.117 bits (344), Expect = 1.130e-39
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 1 
Query:  409 GKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    7 GKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 115
[Close]
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000040985.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:27523804:27524807:1 gene:ENSAMXG00000035879.1 transcript:ENSAMXT00000040985.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 135.961 bits (341), Expect = 3.392e-39
Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:   24 AGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 115
[Close]
BLAST of Histone H2A vs. Ensembl Cavefish
Match: ENSAMXT00000050088.1 (pep primary_assembly:Astyanax_mexicanus-2.0:21:10166233:10171033:1 gene:ENSAMXG00000038836.1 transcript:ENSAMXT00000050088.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 135.576 bits (340), Expect = 5.134e-39
Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:   25 AGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 116
[Close]
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011253.1 (pep scaffold:Pmarinus_7.0:GL479154:926813:927238:-1 gene:ENSPMAG00000010226.1 transcript:ENSPMAT00000011253.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 143.28 bits (360), Expect = 1.335e-42
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++K+RSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005338.1 (pep scaffold:Pmarinus_7.0:GL476820:708214:709027:-1 gene:ENSPMAG00000004859.1 transcript:ENSPMAT00000005338.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 140.584 bits (353), Expect = 1.381e-41
Identity = 92/113 (81.42%), Postives = 107/113 (94.69%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G  +++++K+RSSRAGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKL+G VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKSRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002388.1 (pep scaffold:Pmarinus_7.0:GL476925:193851:194294:1 gene:ENSPMAG00000002177.1 transcript:ENSPMAT00000002388.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 139.813 bits (351), Expect = 2.141e-41
Identity = 92/113 (81.42%), Postives = 107/113 (94.69%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G  +++++K+RSSRAGLQFPVGR+HR LRKGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKL+G VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKSRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008684.1 (pep scaffold:Pmarinus_7.0:GL488596:2418:2939:-1 gene:ENSPMAG00000007861.1 transcript:ENSPMAT00000008684.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 138.272 bits (347), Expect = 1.249e-40
Identity = 91/113 (80.53%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G  +++++K+ SSRAGLQFPVGRIHR LRKGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPR+LQLA+RNDEELNKL+G VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKSRAKAKSHSSRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRNLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011166.1 (pep scaffold:Pmarinus_7.0:GL476820:1027708:1028088:1 gene:ENSPMAG00000010139.1 transcript:ENSPMAT00000011166.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 137.502 bits (345), Expect = 1.427e-40
Identity = 91/113 (80.53%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G  +++++K+RSSRAGLQFPVGR+HR L KGN+A+RVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKL+G VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKSRAKAKSRSSRAGLQFPVGRVHRLLCKGNYAQRVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Yeast
Match: HTA2 (Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical (see also HTA1) subtypes; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p [Source:SGD;Acc:S000000099])

HSP 1 Score: 127.872 bits (320), Expect = 6.866e-37
Identity = 78/92 (84.78%), Postives = 87/92 (94.57%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGL FPVGR+HR LR+GN+A+R+G+GAPVYL AVLEYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRND+ELNKLLG VTIAQGGVLPNI 
Sbjct:   23 AGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIH 114
[Close]
BLAST of Histone H2A vs. Ensembl Yeast
Match: HTA1 (Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p; N-terminally propionylated in vivo [Source:SGD;Acc:S000002633])

HSP 1 Score: 127.872 bits (320), Expect = 6.866e-37
Identity = 78/92 (84.78%), Postives = 87/92 (94.57%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGL FPVGR+HR LR+GN+A+R+G+GAPVYL AVLEYLAAE+LELAGNAARDNKK+RIIPRHLQLAIRND+ELNKLLG VTIAQGGVLPNI 
Sbjct:   23 AGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIH 114
[Close]
BLAST of Histone H2A vs. Ensembl Yeast
Match: HTZ1 (Histone variant H2AZ; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling [Source:SGD;Acc:S000005372])

HSP 1 Score: 78.1814 bits (191), Expect = 2.713e-18
Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKL-RKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNI 732
            AGLQFPVGRI R L R      RVG+ A +YL AVLEYL AEVLELAGNAA+D K  RI PRHLQLAIR D+EL+ L+ + TIA GGVLP+I
Sbjct:   29 AGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHI 119
[Close]
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO31130 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SYT5])

HSP 1 Score: 137.117 bits (344), Expect = 3.699e-40
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK GK+        +  AGLQFPVGR+HR LRKGN+AERVGAGAPVY+AAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKGGKSRAKGKSRSAR-AGLQFPVGRVHRFLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO26088 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7TCX1])

HSP 1 Score: 136.732 bits (343), Expect = 5.095e-40
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741
            MS +GK GK   ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL  VTIAQGGVLPNIQ S
Sbjct:    1 MSXRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
[Close]
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO27766 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5])

HSP 1 Score: 136.732 bits (343), Expect = 5.980e-40
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741
            MS +GK GK   ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL  VTIAQGGVLPNIQ S
Sbjct:    1 MSGRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
[Close]
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO27764 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5])

HSP 1 Score: 136.732 bits (343), Expect = 5.980e-40
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741
            MS +GK GK   ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL  VTIAQGGVLPNIQ S
Sbjct:    1 MSGRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
[Close]
BLAST of Histone H2A vs. Ensembl Nematostella
Match: EDO37980 (Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5])

HSP 1 Score: 136.732 bits (343), Expect = 5.980e-40
Identity = 97/115 (84.35%), Postives = 106/115 (92.17%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741
            MS +GK GK   ++SKTRSSRAGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYL+AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELN+LL  VTIAQGGVLPNIQ S
Sbjct:    1 MSGRGK-GKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVYLAAVLEYLSAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAS 114
[Close]
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000000848.2 (pep primary_assembly:ASM223467v1:14:15235538:15240676:1 gene:ENSORLG00000000686.2 transcript:ENSORLT00000000848.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.895 bits (359), Expect = 9.338e-42
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGAKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000036997.1 (pep primary_assembly:ASM223467v1:1:8896657:8898783:1 gene:ENSORLG00000027232.1 transcript:ENSORLT00000036997.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.895 bits (359), Expect = 1.181e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000043619.1 (pep primary_assembly:ASM223467v1:1:2176285:2181192:1 gene:ENSORLG00000022228.1 transcript:ENSORLT00000043619.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.51 bits (358), Expect = 1.235e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000038758.1 (pep primary_assembly:ASM223467v1:1:3981263:3984167:1 gene:ENSORLG00000028520.1 transcript:ENSORLT00000038758.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.51 bits (358), Expect = 1.356e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Ensembl Medaka
Match: ENSORLT00000042228.1 (pep primary_assembly:ASM223467v1:23:22958305:22963215:1 gene:ENSORLG00000027073.1 transcript:ENSORLT00000042228.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.51 bits (358), Expect = 1.465e-41
Identity = 95/113 (84.07%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK G   ++++KTRSSRAGLQFPVGR+HR LRKGN+AERVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQ 113
[Close]
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000006040.1 (SMESG000006040.1)

HSP 1 Score: 160.999 bits (406), Expect = 5.086e-49
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741
            MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS
Sbjct:    1 MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 115
[Close]
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000006040.1 (SMESG000006040.1)

HSP 1 Score: 160.614 bits (405), Expect = 7.209e-49
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 741
            MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS
Sbjct:    1 MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQIS 115
[Close]
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000067932.1 (SMESG000067932.1)

HSP 1 Score: 144.436 bits (363), Expect = 1.363e-42
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 1 
Query:  397 MSAK-GKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS K GKAGKT+++QSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLG VTI+QGGV+PNIQ
Sbjct:    1 MSGKAGKAGKTSRNQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGGVTISQGGVIPNIQ 114
[Close]
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000018807.1 (SMESG000018807.1)

HSP 1 Score: 140.198 bits (352), Expect = 6.354e-41
Identity = 94/113 (83.19%), Postives = 98/113 (86.73%), Query Frame = 1 
Query:  397 MSAKGKAGXXXXXXXXXXXXXAGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            MS +GK GK+           AGLQFPVGRIHR LRKGN+AERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK+RIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQ
Sbjct:    1 MSGRGKGGKSRNKAKSRSVR-AGLQFPVGRIHRMLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGSVTIAQGGVLPNIQ 112
[Close]
BLAST of Histone H2A vs. Planmine SMEST
Match: SMESG000072071.1 (SMESG000072071.1)

HSP 1 Score: 113.235 bits (282), Expect = 1.991e-30
Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = 1 
Query:  460 AGLQFPVGRIHRKLRKGNFAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ 735
            AGL FPVGR+HR LRKG F ER+G GAPVY++A+LEYL AE+LELAGNAARDNKKSRI PRH+ LAI+ND EL++LL  VTI+QGGV+PNIQ
Sbjct:   24 AGLTFPVGRVHRLLRKGKFGERIGHGAPVYMSAILEYLTAEILELAGNAARDNKKSRIAPRHILLAIKNDSELSELLKSVTISQGGVMPNIQ 115
The following BLAST results are available for this feature:
BLAST of Histone H2A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
H2AC201.492e-4284.07H2A clustered histone 20 [Source:HGNC Symbol;Acc:H... [more]
H2AJ1.626e-4284.96H2A.J histone [Source:HGNC Symbol;Acc:HGNC:14456][more]
H2AJ1.626e-4284.96H2A.J histone [Source:HGNC Symbol;Acc:HGNC:14456][more]
H2AC192.145e-4284.07H2A clustered histone 19 [Source:HGNC Symbol;Acc:H... [more]
H2AC182.145e-4284.07H2A clustered histone 18 [Source:HGNC Symbol;Acc:H... [more]
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BLAST of Histone H2A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
his-352.409e-3790.22Histone H2A [Source:UniProtKB/TrEMBL;Acc:Q27485][more]
his-352.409e-3790.22Histone H2A [Source:UniProtKB/TrEMBL;Acc:Q27485][more]
his-573.361e-3790.22Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P095... [more]
his-683.496e-3790.22Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P095... [more]
his-653.496e-3790.22Histone H2A [Source:UniProtKB/Swiss-Prot;Acc:P095... [more]
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BLAST of Histone H2A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
His2A:CG338501.338e-3993.48gene:FBgn0053850 transcript:FBtr0091854[more]
His2A:CG338471.338e-3993.48gene:FBgn0053847 transcript:FBtr0091851[more]
His2A:CG338441.338e-3993.48gene:FBgn0053844 transcript:FBtr0091848[more]
His2A:CG338321.338e-3993.48gene:FBgn0053832 transcript:FBtr0091836[more]
His2A:CG338261.338e-3993.48gene:FBgn0053826 transcript:FBtr0091830[more]
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BLAST of Histone H2A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hist1h2a111.081e-4184.07histone cluster 1 H2A family member 11 [Source:ZFI... [more]
hist1h2a111.081e-4184.07histone cluster 1 H2A family member 11 [Source:ZFI... [more]
hist1h2a111.081e-4184.07histone cluster 1 H2A family member 11 [Source:ZFI... [more]
hist1h2a111.081e-4184.07histone cluster 1 H2A family member 11 [Source:ZFI... [more]
hist1h2a111.081e-4184.07histone cluster 1 H2A family member 11 [Source:ZFI... [more]
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BLAST of Histone H2A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSXETT00000010097.11.292e-4285.84H2A.X variant histone [Source:NCBI gene;Acc:100487... [more]
mid16.587e-4284.07midline 1 [Source:Xenbase;Acc:XB-GENE-494584][more]
H2AX7.532e-4284.07histone H2A type 2-B [Source:NCBI gene;Acc:1004866... [more]
h2afx.21.381e-4184.96H2A histone family member X, gene 2 [Source:NCBI g... [more]
ENSXETT00000000447.11.769e-4184.96pep primary_assembly:Xenopus_tropicalis_v9.1:3:124... [more]
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BLAST of Histone H2A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
H2ac201.024e-4284.07H2A clustered histone 20 [Source:MGI Symbol;Acc:MG... [more]
H2ac181.472e-4284.07H2A clustered histone 18 [Source:MGI Symbol;Acc:MG... [more]
H2ac191.472e-4284.07H2A clustered histone 19 [Source:MGI Symbol;Acc:MG... [more]
H2aj3.509e-4284.07H2J.A histone [Source:MGI Symbol;Acc:MGI:3606192][more]
H2aj4.507e-4284.07H2J.A histone [Source:MGI Symbol;Acc:MGI:3606192][more]
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BLAST of Histone H2A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q64523|H2A2C_MOUSE7.166e-4284.07Histone H2A type 2-C OS=Mus musculus OX=10090 GN=H... [more]
sp|Q16777|H2A2C_HUMAN7.166e-4284.07Histone H2A type 2-C OS=Homo sapiens OX=9606 GN=H2... [more]
sp|A1A4R1|H2A2C_BOVIN7.166e-4284.07Histone H2A type 2-C OS=Bos taurus OX=9913 GN=H2AC... [more]
sp|Q9BTM1|H2AJ_HUMAN7.807e-4284.96Histone H2A.J OS=Homo sapiens OX=9606 GN=H2AJ PE=1... [more]
sp|Q3ZBX9|H2AJ_BOVIN7.807e-4284.96Histone H2A.J OS=Bos taurus OX=9913 GN=H2AJ PE=2 S... [more]
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BLAST of Histone H2A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
G1NSF55.000e-4182.50Histone H2A OS=Myotis lucifugus OX=59463 GN=HIST2H... [more]
G1MMV75.929e-4183.19Histone H2A OS=Ailuropoda melanoleuca OX=9646 PE=3... [more]
F6ZAW48.503e-4183.90Histone H2A OS=Ornithorhynchus anatinus OX=9258 PE... [more]
R0LLY29.550e-4182.91Histone H2A (Fragment) OS=Anas platyrhynchos OX=88... [more]
Q644261.104e-4081.51Histone H2A (Fragment) OS=Mus musculus domesticus ... [more]
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BLAST of Histone H2A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
h2ax3.287e-4284.96H2A.X variant histone [Source:NCBI gene;Acc:394048... [more]
ENSAMXT00000026274.21.158e-4184.07pep primary_assembly:Astyanax_mexicanus-2.0:21:101... [more]
ENSAMXT00000025817.21.130e-3985.32pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000040985.13.392e-3991.30pep primary_assembly:Astyanax_mexicanus-2.0:20:275... [more]
ENSAMXT00000050088.15.134e-3991.30pep primary_assembly:Astyanax_mexicanus-2.0:21:101... [more]
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BLAST of Histone H2A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000011253.11.335e-4284.07pep scaffold:Pmarinus_7.0:GL479154:926813:927238:-... [more]
ENSPMAT00000005338.11.381e-4181.42pep scaffold:Pmarinus_7.0:GL476820:708214:709027:-... [more]
ENSPMAT00000002388.12.141e-4181.42pep scaffold:Pmarinus_7.0:GL476925:193851:194294:1... [more]
ENSPMAT00000008684.11.249e-4080.53pep scaffold:Pmarinus_7.0:GL488596:2418:2939:-1 ge... [more]
ENSPMAT00000011166.11.427e-4080.53pep scaffold:Pmarinus_7.0:GL476820:1027708:1028088... [more]
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BLAST of Histone H2A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
HTA26.866e-3784.78Histone H2A; core histone protein required for chr... [more]
HTA16.866e-3784.78Histone H2A; core histone protein required for chr... [more]
HTZ12.713e-1867.39Histone variant H2AZ; exchanged for histone H2A in... [more]
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BLAST of Histone H2A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO311303.699e-4078.76Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SYT5][more]
EDO260885.095e-4084.35Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7TCX1][more]
EDO277665.980e-4084.35Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5][more]
EDO277645.980e-4084.35Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5][more]
EDO379805.980e-4084.35Histone H2A [Source:UniProtKB/TrEMBL;Acc:A7SEB5][more]
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BLAST of Histone H2A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000000848.29.338e-4284.07pep primary_assembly:ASM223467v1:14:15235538:15240... [more]
ENSORLT00000036997.11.181e-4184.07pep primary_assembly:ASM223467v1:1:8896657:8898783... [more]
ENSORLT00000043619.11.235e-4184.07pep primary_assembly:ASM223467v1:1:2176285:2181192... [more]
ENSORLT00000038758.11.356e-4184.07pep primary_assembly:ASM223467v1:1:3981263:3984167... [more]
ENSORLT00000042228.11.465e-4184.07pep primary_assembly:ASM223467v1:23:22958305:22963... [more]
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BLAST of Histone H2A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000006040.15.086e-49100.00SMESG000006040.1[more]
SMESG000006040.17.209e-49100.00SMESG000006040.1[more]
SMESG000067932.11.363e-4292.98SMESG000067932.1[more]
SMESG000018807.16.354e-4183.19SMESG000018807.1[more]
SMESG000072071.11.991e-3075.00SMESG000072071.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011413 ID=SMED30011413|Name=Histone H2A|organism=Schmidtea mediterranea sexual|type=transcript|length=1024bp
TGGAAAAAGGTTGAAAGATTTTCGTCTTGATAAGGAGCGAGCCGCATAAA
ATATAATGTATAACCGAATGACTGATGCTTCACTGCAAACAGATAAAGGT
CGTTTGGCTCCGACTTGAGATGGTGCATGACCAATCAAATACTAAAGTAC
CAAGACGAACAGGACCAGATTGAGATCACAGCGCCCTTCCTTCATATCAC
ATTTGTCCACAACCCTGAAAGCTCTTATTCGTTAAAAGATCCGAAGAAGC
AATTATGTTATAAATGCAATCTATCAAAAAGATAATTAATATCAAAAAAC
GAAAATGAAATTAAAAAATACCGCAACGTAAGTTATTCATTTAAATTAAA
TATATAATCTAAAAGTTTTCGAGGCTTATCATTTAATTCGTTTTTAATGT
CTGCAAAAGGTAAAGCTGGTAAAACAACTAAGTCCCAAAGTAAAACTCGT
AGTTCGAGAGCTGGTCTACAGTTTCCTGTTGGTAGAATTCACAGGAAGTT
GCGAAAGGGAAATTTTGCTGAGCGTGTAGGAGCTGGTGCTCCAGTTTATT
TGGCAGCAGTTTTGGAGTATCTGGCGGCAGAAGTATTAGAATTAGCTGGT
AATGCTGCTAGAGACAATAAGAAGAGCCGTATTATTCCACGCCATTTGCA
ACTAGCTATTCGAAATGACGAAGAATTAAATAAGTTACTGGGTAAAGTAA
CCATTGCACAAGGCGGTGTTTTGCCAAATATACAAATTTCTCTTTTACCC
AAAAAAGCAGAGGAGAAAAAGTAACTTGAATTTAATTGAGAATGCTCAAA
CGGTCCTCTTTAGGGCCACATATTTTGATTGTTAATGAATCTAGAAACAT
GTAAAAATTATTTAATATTTCACATGCTCGTGTTAATATCTAATAGGTAT
ACAATTGTTAATGTTGGAATTTTTATTTGTGAATTAGACAAAGGATATAT
AGTATATACATATTGCATTGGTAATTATAAAGATTTTACGTGACTATAGT
TGTATAATTTGCATTTCGTTGACG
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protein sequence of SMED30011413-orf-1

>SMED30011413-orf-1 ID=SMED30011413-orf-1|Name=SMED30011413-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=126bp
MSAKGKAGKTTKSQSKTRSSRAGLQFPVGRIHRKLRKGNFAERVGAGAPV
YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGK
VTIAQGGVLPNIQISLLPKKAEEKK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS
Vocabulary: molecular function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: cellular component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
GO:0005694chromosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 58..71
score: 89.46
coord: 100..118
score: 74.24
coord: 43..58
score: 90.36
coord: 72..86
score: 81.65
coord: 14..36
score: 70.19
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 3.7E-78
score: 275.6
IPR002119Histone H2ACDDcd00074H2Acoord: 6..120
e-value: 1.60756E-67
score: 197.172
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..125
e-value: 9.6E-18
score: 63.6
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 1..125
e-value: 2.5E-63
score: 213.7
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 16..120
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 3..89
e-value: 1.7E-16
score: 60.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR23430:SF225coord: 1..122
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..122
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28