Ribosomal protein L37

Overview
NameRibosomal protein L37
Smed IDSMED30011412
Length (bp)1086
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Ribosomal protein L37 (SMED30011412) t-SNE clustered cells

Violin plots show distribution of expression levels for Ribosomal protein L37 (SMED30011412) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ribosomal protein L37 (SMED30011412) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ribosomal protein L37 (SMED30011412) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30011412

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 18

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30011412h1SMcG0007632 SmedASXL_065334SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30011412h1SMcG0007632 Contig38680newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30011412h1SMcG0007632 Contig38680uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
pharynxSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30011412h1SMcG0007632 dd_Smed_v4_97_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30011412h1SMcG0007632 dd_Smed_v4_74_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30011412h1SMcG0007632 dd_Smed_v4_74_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30011412h1SMcG0007632 dd_Smed_v4_74_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30011412h1SMcG0007632 dd_Smed_v4_74_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
pigment cellSMED30011412h1SMcG0007632 dd_Smed_v6_74_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30011412h1SMcG0007632 dd_Smed_v6_74_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
glial cellSMED30011412h1SMcG0007632 dd_Smed_v6_74_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Human
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 108.227 bits (269), Expect = 1.216e-28
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG-KPKAK 514
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF++GFR G  PK K
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK 87
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Human
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 100.523 bits (249), Expect = 6.387e-26
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFK 481
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF+
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFR 75
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Human
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 67.3958 bits (163), Expect = 7.909e-14
Identity = 32/54 (59.26%), Postives = 36/54 (66.67%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQ 418
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R    S K Q
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKCMDSVKEQ 54
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Celegans
Match: W01D2.1 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:O62388])

HSP 1 Score: 101.679 bits (252), Expect = 1.205e-26
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAK 514
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+CASC YP+AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR G   KP+A+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFREGTTPKPRAQ 89
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Celegans
Match: W01D2.1 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:O62388])

HSP 1 Score: 101.679 bits (252), Expect = 1.205e-26
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAK 514
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+CASC YP+AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR G   KP+A+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFREGTTPKPRAQ 89
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Celegans
Match: W01D2.1 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:O62388])

HSP 1 Score: 101.679 bits (252), Expect = 1.205e-26
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAK 514
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+CASC YP+AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR G   KP+A+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFREGTTPKPRAQ 89
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Celegans
Match: rpl-37 (60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622])

HSP 1 Score: 97.8265 bits (242), Expect = 4.194e-25
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFR--TGKPKAK 514
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+CASC Y +AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR  T KP+A+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPKPRAQ 88
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Celegans
Match: rpl-37 (60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622])

HSP 1 Score: 97.8265 bits (242), Expect = 4.194e-25
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFR--TGKPKAK 514
            MTKGT +FGK+H K+HT C+RCGKSS+HIQKK+CASC Y +AK R +NW  K+  RRTTGTGR  HLR V+ RF+NGFR  T KP+A+
Sbjct:    1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPKPRAQ 88
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Fly
Match: RpL37a (gene:FBgn0030616 transcript:FBtr0074027)

HSP 1 Score: 129.028 bits (323), Expect = 7.888e-37
Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAKTA 520
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQK  CA C YP AK+R +NWS KA+ R+TTGTGR  HL+ V RRF+NGFR G   KPK   A
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVA 91
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Fly
Match: RpL37a (gene:FBgn0030616 transcript:FBtr0330403)

HSP 1 Score: 129.028 bits (323), Expect = 7.888e-37
Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAKTA 520
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQK  CA C YP AK+R +NWS KA+ R+TTGTGR  HL+ V RRF+NGFR G   KPK   A
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVA 91
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Fly
Match: RpL37b (gene:FBgn0034822 transcript:FBtr0071978)

HSP 1 Score: 120.553 bits (301), Expect = 1.183e-33
Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 499
            MTKGTTSFGKRHNKTHT CRRCG SSYH+QK KC+ C YP AK R FNWS KA+GR+  GTGR  +L+++ RRF+NG R G
Sbjct:    1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREG 81
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Zebrafish
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 108.612 bits (270), Expect = 5.654e-29
Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 499
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  H++ V RRF+NGFR G
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREG 81
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Zebrafish
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 108.612 bits (270), Expect = 5.654e-29
Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 499
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  H++ V RRF+NGFR G
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREG 81
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Xenopus
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:100135133])

HSP 1 Score: 112.464 bits (280), Expect = 2.879e-30
Identity = 56/87 (64.37%), Postives = 64/87 (73.56%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG-KPKAK 514
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRFKNGFR G  PK K
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFKNGFREGTTPKPK 87
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Xenopus
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:100135133])

HSP 1 Score: 99.3673 bits (246), Expect = 1.781e-25
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 2 
Query:  260 TKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKN 484
            TKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRFK+
Sbjct:    1 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFKS 75
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Xenopus
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:100135133])

HSP 1 Score: 98.5969 bits (244), Expect = 5.903e-25
Identity = 47/77 (61.04%), Postives = 56/77 (72.73%), Query Frame = 2 
Query:  260 TKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGF 490
            TKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF + F
Sbjct:    3 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKVVYRRFNSTF 79
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Mouse
Match: Rpl37 (ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531])

HSP 1 Score: 108.227 bits (269), Expect = 8.351e-29
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG-KPKAK 514
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  HL+ V+RRF++GFR G  PK K
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK 87
[Close]
BLAST of Ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|O44125|RL37_SCHMA (60S ribosomal protein L37 OS=Schistosoma mansoni OX=6183 GN=RPL37 PE=3 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 2.436e-36
Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            MTKGTTSFGKRHNK+HT CRRCG+ SYHIQKK C+SC YP A++R +NWS KA+ RRTTGTGR  HL+ VHRRFK GFR+G PK   A
Sbjct:    1 MTKGTTSFGKRHNKSHTQCRRCGRKSYHIQKKTCSSCGYPSARLRKYNWSEKAKRRRTTGTGRMLHLKRVHRRFKQGFRSGPPKPVKA 88
[Close]
BLAST of Ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|Q9C0T1|RL37_EMENI (60S ribosomal protein L37 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rpl37 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.148e-36
Identity = 61/85 (71.76%), Postives = 70/85 (82.35%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKA 511
            MTKGT+SFGKRHNKTHT CRRCG+ SYHIQK  CA+C YP AK R +NWS KA+ R+TTG+GR +HLR VHRRFKNGF+ G PK 
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRRSYHIQKSTCANCGYPAAKTRKYNWSEKAKRRKTTGSGRTAHLRDVHRRFKNGFQVGTPKG 85
[Close]
BLAST of Ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|Q9VXX8|RL371_DROME (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37a PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.907e-36
Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAKTA 520
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQK  CA C YP AK+R +NWS KA+ R+TTGTGR  HL+ V RRF+NGFR G   KPK   A
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREGTQAKPKKAVA 91
[Close]
BLAST of Ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|Q962S7|RL37_SPOFR (60S ribosomal protein L37 OS=Spodoptera frugiperda OX=7108 GN=RpL37 PE=3 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 2.037e-35
Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            MTKGT+SFGKR NKTHT CRRCG+SSYHIQK KCA C YP AK+R ++WS KA+ R+TTGTGR  HL+ V RRF+NGF+ GKP  K A
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRMRHLKIVRRRFRNGFKEGKPTPKKA 88
[Close]
BLAST of Ribosomal protein L37 vs. UniProt/SwissProt
Match: sp|P59289|RL37A_SCHPO (60S ribosomal protein L37-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3703 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.751e-33
Identity = 59/83 (71.08%), Postives = 65/83 (78.31%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKP 505
            MTKGT SFG RHNK+HT CRRCGK S+HIQK  CA C YP AK R +NW  KA+ RRTTGTGR S+L+ VHR FKNGFR GKP
Sbjct:    1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRAGKP 83
[Close]
BLAST of Ribosomal protein L37 vs. TrEMBL
Match: A0A087W0I6 (Ribosomal protein L37 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000183700 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.917e-37
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            MTKGTTSFGKRHNKTHT CRRCG+ SYHIQKK CA+C YP  +IR +NWS KA+ R+TTGTGRC HL++VHRRFK+GFR+G PKAK A
Sbjct:    1 MTKGTTSFGKRHNKTHTQCRRCGRKSYHIQKKTCAACGYPSPRIRKYNWSVKARRRKTTGTGRCLHLKAVHRRFKHGFRSGPPKAKAA 88
[Close]
BLAST of Ribosomal protein L37 vs. TrEMBL
Match: A0A3S3SCC4 (Ribosomal protein L37 OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_07401 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.831e-36
Identity = 64/83 (77.11%), Postives = 73/83 (87.95%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKP 505
            MTKGT+SFGKRHNKTHT CRRCG+SSYHIQKK+CASC YP  +IR +NWS KA+ R+TTGTGR  HL+ VHRRFKNGFR+GKP
Sbjct:    1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKKRCASCGYPSRRIRKYNWSEKAKRRKTTGTGRMRHLKLVHRRFKNGFRSGKP 83
[Close]
BLAST of Ribosomal protein L37 vs. TrEMBL
Match: U6JBG9 (Ribosomal protein L37 OS=Echinococcus granulosus OX=6210 GN=EGR_04872 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.001e-36
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            MTKGTTSFGKRHNK+HT CRRCG+ SYHIQKK CA+C YP  +IR +NWS KA+ R+TTGTGRC HL++VHRRFK+GFR+G PKAK A
Sbjct:    1 MTKGTTSFGKRHNKSHTQCRRCGRKSYHIQKKTCAACGYPSPRIRKYNWSVKARRRKTTGTGRCLHLKAVHRRFKHGFRSGPPKAKAA 88
[Close]
BLAST of Ribosomal protein L37 vs. TrEMBL
Match: A0A0R3TQE8 (Ribosomal protein L37 OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS9762 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.288e-36
Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG--KPKAK 514
            MTKGTTSFGKRHNK+HT CRRCGK SYHIQKK CASC YP AK+R +NWS KA  RRTTGTGRC HL+SV RRFKNGFR+G  KP+AK
Sbjct:    1 MTKGTTSFGKRHNKSHTQCRRCGKKSYHIQKKTCASCGYPSAKMRKYNWSAKALRRRTTGTGRCLHLKSVQRRFKNGFRSGQAKPRAK 88
[Close]
BLAST of Ribosomal protein L37 vs. TrEMBL
Match: A0A0R3UHJ7 (Ribosomal protein L37 OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS6824 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 4.307e-36
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            MTKGTTSFGKRHNKTHT CRRCG+ SYHIQKK CA+C YP AK+R +NWS KA+ R+TTGTGRC HL+SVHRRFK+GFR+G P++K  
Sbjct:    1 MTKGTTSFGKRHNKTHTQCRRCGRKSYHIQKKTCAACGYPSAKMRKYNWSEKARRRKTTGTGRCLHLKSVHRRFKHGFRSGPPRSKPV 88
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Cavefish
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 106.301 bits (264), Expect = 4.577e-28
Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 499
             TKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  H++ V RRF+NGFR G
Sbjct:    1 QTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPSKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREG 81
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Cavefish
Match: RPL37 (ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347])

HSP 1 Score: 90.8929 bits (224), Expect = 1.228e-22
Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLR 460
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP  + R +NWS KA+ R TTGTGR  H++
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPSKRKRKYNWSAKAKRRSTTGTGRMRHMK 68
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Sea Lamprey
Match: rpl37 (ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39])

HSP 1 Score: 113.235 bits (282), Expect = 2.166e-31
Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG---KPKAKTA 520
            MTKGT+SFGKR NKTHT CRRCG  +YHIQK  CA C YP  + R +NWS KA+ R TTGTGR  HL+ V RRF+NGFR G   KP+   A
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGAKAYHIQKSLCAKCGYPYKRKRSYNWSVKAKRRNTTGTGRMRHLKVVFRRFRNGFREGTTPKPRRSVA 91
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Yeast
Match: RPL37B (Ribosomal 60S subunit protein L37B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; protein abundance increases in response to DNA replication stress; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37B has a paralog, RPL37A, that arose from the whole genome duplication [Source:SGD;Acc:S000002908])

HSP 1 Score: 114.005 bits (284), Expect = 4.552e-32
Identity = 56/88 (63.64%), Postives = 67/88 (76.14%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            M KGT SFGKRHNK+HT C RCG+ S+H+QKK C+SC YP AK R  NW+ KA+ R TTGTGR  +L+ V RRFKNGF+TG  KA +A
Sbjct:    1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGSAKATSA 88
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Yeast
Match: RPL37A (Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication [Source:SGD;Acc:S000004175])

HSP 1 Score: 112.079 bits (279), Expect = 3.014e-31
Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTGKPKAKTA 520
            M KGT SFGKRHNK+HT C RCG+ S+H+QKK C+SC YP AK R +NW  KA+ R TTGTGR  +L+ V RRFKNGF+TG     +A
Sbjct:    1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKTRSYNWGAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGSASKASA 88
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Nematostella
Match: EDO38233 (Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:A7SDI8])

HSP 1 Score: 118.627 bits (296), Expect = 4.032e-33
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 499
            MTKGT+SFGKRHNK+HT C RCG+ +YHIQKK+CA C +P A++R FNWS KA+ R TTGTGR  HL+ V+RRF+NGF+ G
Sbjct:    1 MTKGTSSFGKRHNKSHTLCVRCGRKAYHIQKKRCAGCGFPSARLRKFNWSMKAKRRTTTGTGRMRHLKLVYRRFQNGFQEG 81
[Close]
BLAST of Ribosomal protein L37 vs. Ensembl Medaka
Match: rpl37 (ribosomal protein L37 [Source:NCBI gene;Acc:101170032])

HSP 1 Score: 112.464 bits (280), Expect = 2.166e-30
Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 2 
Query:  257 MTKGTTSFGKRHNKTHTFCRRCGKSSYHIQKKKCASCAYPEAKIRHFNWSTKAQGRRTTGTGRCSHLRSVHRRFKNGFRTG 499
            MTKGT+SFGKR NKTHT CRRCG  +YH+QK  C  C YP+ + R +NWS KA+ R TTGTGR  HL+ V+RRF+NGFR G
Sbjct:    1 MTKGTSSFGKRRNKTHTLCRRCGAKAYHLQKSTCGKCGYPQKRKRKYNWSAKAKRRNTTGTGRLRHLKVVYRRFRNGFREG 81
[Close]
BLAST of Ribosomal protein L37 vs. Planmine SMEST
Match: SMESG000055421.1 (SMESG000055421.1)

HSP 1 Score: 177.948 bits (450), Expect = 5.797e-56
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  725 MAVAIINPTRNCGIPTESNKLFDLTHSFSRNRSPVILSTSRPIRTETPKVQQTNNKVATKKSGNMVNNPWGPIFSDRKTFNELHFC 982
            MAVAIINPTRNCGIPTESNKLFDLTHSFSRNRSPVILSTSRPIRTETPKVQQTNNKVATKKSGNMVNNPWGPIFSDRKTFNELHFC
Sbjct:    1 MAVAIINPTRNCGIPTESNKLFDLTHSFSRNRSPVILSTSRPIRTETPKVQQTNNKVATKKSGNMVNNPWGPIFSDRKTFNELHFC 86
[Close]
BLAST of Ribosomal protein L37 vs. Planmine SMEST
Match: SMESG000055421.1 (SMESG000055421.1)

HSP 1 Score: 154.066 bits (388), Expect = 1.063e-46
Identity = 78/86 (90.70%), Postives = 78/86 (90.70%), Query Frame = 2 
Query:  725 MAVAIINPTRNCGIPTESNKLFDLTHSFSRNRSPVILSTSRPIRTETPKVQQTNNKVATKKSGNMVNNPWGPIFSDRKTFNELHFC 982
            MAVAIINPTRNCGIPTESN        FSRNRSPVILSTSRPIRTETPKVQQTNNKVATKKSGNMVNNPWGPIFSDRKTFNELHFC
Sbjct:    1 MAVAIINPTRNCGIPTESN--------FSRNRSPVILSTSRPIRTETPKVQQTNNKVATKKSGNMVNNPWGPIFSDRKTFNELHFC 78
The following BLAST results are available for this feature:
BLAST of Ribosomal protein L37 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RPL371.216e-2862.07ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL376.387e-2662.67ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL377.909e-1459.26ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
W01D2.11.205e-2665.17Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
W01D2.11.205e-2665.17Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
W01D2.11.205e-2665.17Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
rpl-374.194e-2564.7760S ribosomal protein L37 [Source:UniProtKB/Swiss... [more]
rpl-374.194e-2564.7760S ribosomal protein L37 [Source:UniProtKB/Swiss... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpL37a7.888e-3769.23gene:FBgn0030616 transcript:FBtr0074027[more]
RpL37a7.888e-3769.23gene:FBgn0030616 transcript:FBtr0330403[more]
RpL37b1.183e-3369.14gene:FBgn0034822 transcript:FBtr0071978[more]
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BLAST of Ribosomal protein L37 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl375.654e-2962.96ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
rpl375.654e-2962.96ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl372.879e-3064.37ribosomal protein L37 [Source:NCBI gene;Acc:100135... [more]
rpl371.781e-2562.67ribosomal protein L37 [Source:NCBI gene;Acc:100135... [more]
rpl375.903e-2561.04ribosomal protein L37 [Source:NCBI gene;Acc:100135... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Rpl378.351e-2962.07ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1... [more]
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BLAST of Ribosomal protein L37 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|O44125|RL37_SCHMA2.436e-3671.5960S ribosomal protein L37 OS=Schistosoma mansoni O... [more]
sp|Q9C0T1|RL37_EMENI4.148e-3671.7660S ribosomal protein L37 OS=Emericella nidulans (... [more]
sp|Q9VXX8|RL371_DROME7.907e-3669.23Probable 60S ribosomal protein L37-A OS=Drosophila... [more]
sp|Q962S7|RL37_SPOFR2.037e-3569.3260S ribosomal protein L37 OS=Spodoptera frugiperda... [more]
sp|P59289|RL37A_SCHPO1.751e-3371.0860S ribosomal protein L37-A OS=Schizosaccharomyces... [more]
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BLAST of Ribosomal protein L37 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A087W0I67.917e-3775.00Ribosomal protein L37 OS=Echinococcus multilocular... [more]
A0A3S3SCC41.831e-3677.11Ribosomal protein L37 OS=Dinothrombium tinctorium ... [more]
U6JBG92.001e-3673.86Ribosomal protein L37 OS=Echinococcus granulosus O... [more]
A0A0R3TQE82.288e-3678.41Ribosomal protein L37 OS=Rodentolepis nana OX=1022... [more]
A0A0R3UHJ74.307e-3673.86Ribosomal protein L37 OS=Mesocestoides corti OX=53... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl374.577e-2861.73ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
RPL371.228e-2261.76ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl372.166e-3162.64ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPL37B4.552e-3263.64Ribosomal 60S subunit protein L37B; required for p... [more]
RPL37A3.014e-3161.36Ribosomal 60S subunit protein L37A; required for p... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO382334.032e-3366.67Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Ac... [more]
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BLAST of Ribosomal protein L37 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl372.166e-3064.20ribosomal protein L37 [Source:NCBI gene;Acc:101170... [more]
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BLAST of Ribosomal protein L37 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000055421.15.797e-56100.00SMESG000055421.1[more]
SMESG000055421.11.063e-4690.70SMESG000055421.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011412 ID=SMED30011412|Name=Ribosomal protein L37|organism=Schmidtea mediterranea sexual|type=transcript|length=1086bp
TTCTCTGCGTCCGATCTCCGTATTTATACTATTCCGTCAAGCTATTTATT
CTGCGTGCCGTTTTCCATTGTTGTCTTTGAGCTGTCAGATTTTAGTAGAA
TAGTTGAATAATTTTCTGTTGTTGCAAGTTGATTCTTTTTGTTGCGTTAC
GTAATAATATAAATAGATATAATTCACAATGAGAGTNANNNNNNANNANA
TNTNTCNTANTCCATTCGANANAATANAAACTTAAAAATATATTTAAATC
GTAAAAATGACTAAAGGTACTACGTCATTTGGTAAACGTCATAACAAAAC
CCATACTTTCTGCAGAAGATGTGGAAAATCCTCATATCATATTCAAAAGA
AAAAATGTGCATCTTGCGCTTACCCTGAAGCCAAAATTAGACACTTTAAT
TGGTCAACCAAAGCTCAAGGAAGAAGAACTACTGGCACTGGAAGATGCAG
TCATTTGAGAAGTGTTCATCGTCGATTTAAAAACGGATTCCGTACTGGAA
AGCCAAAAGCTAAGACCGCATAATCTTTAAATCAATNANNNNNGNAATTG
NTTNNNANNNNANANNNAAAAAAACCGATTTTGGTTTTTTTATGTTTTGC
ATCGTACAAAGCTATCTTTATCAAACTCCGGTCAATTCAACTAATCCATT
TAATTCAGTAGTCTTTTGTATTAAAAGAAGAAATTCGAGATCGAAGTTTT
TCGGAAGCTAACATTACCATAACAATGGCAGTTGCAATCATAAATCCTAC
TAGAAATTGTGGAATACCGACTGAGTCAAACAAATTATTTGATTTAACGC
ATAGTTTTAGCCGAAATCGTAGCCCTGTGATTTTATCTACAAGTCGCCCG
ATTCGAACCGAAACACCAAAGGTTCAACAAACCAACAATAAAGTGGCGAC
AAAGAAATCCGGAAACATGGTCAACAATCCATGGGGCCCGATTTTTTCTG
ATCGAAAAACATTCAATGAATTACATTTTTGTTAAAATTTTAAGAAACTC
TTGATTTTGATATGACACTTTTCTAGTTAATTTGCAAGCTGTCATTAATA
TATTTTAGTGGTTAAAAAAAAAAAAAAAAAATGCGA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002075pigment cell
PLANA:0002109X1 cell
PLANA:0003116parenchymal cell
PLANA:0007528glial cell
Vocabulary: INTERPRO
TermDefinition
IPR001569Ribosomal_L37e
IPR011331Ribosomal_L37ae/L37e
IPR018267Ribosomal_L37e_CS
IPR011332Ribosomal_zn-bd
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: biological process
TermDefinition
GO:0006412translation
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
GO:0019843rRNA binding
GO:0046872metal ion binding