60S ribosomal protein L44

Overview
Name60S ribosomal protein L44
Smed IDSMED30011003
Length (bp)454
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60S ribosomal protein L44 (SMED30011003) t-SNE clustered cells

Violin plots show distribution of expression levels for 60S ribosomal protein L44 (SMED30011003) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 60S ribosomal protein L44 (SMED30011003) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 60S ribosomal protein L44 (SMED30011003) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30011003

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30011003SMESG000026827.1 SmedASXL_003679SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
body wall musculatureSMED30011003SMESG000026827.1 dd_Smed_v4_64_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30011003SMESG000026827.1 dd_Smed_v6_64_0dd_Smed_v6PMID:29674432
Plass et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of 60S ribosomal protein L44 vs. Ensembl Human
Match: RPL36A (ribosomal protein L36a [Source:HGNC Symbol;Acc:HGNC:10359])

HSP 1 Score: 170.244 bits (430), Expect = 9.219e-55
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   37 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 142          
BLAST of 60S ribosomal protein L44 vs. Ensembl Human
Match: RPL36A (ribosomal protein L36a [Source:HGNC Symbol;Acc:HGNC:10359])

HSP 1 Score: 170.244 bits (430), Expect = 9.219e-55
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   37 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 142          
BLAST of 60S ribosomal protein L44 vs. Ensembl Human
Match: RPL36A (ribosomal protein L36a [Source:HGNC Symbol;Acc:HGNC:10359])

HSP 1 Score: 168.318 bits (425), Expect = 1.669e-54
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Human
Match: RPL36AL (ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346])

HSP 1 Score: 167.933 bits (424), Expect = 2.918e-54
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQG+RRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Human
Match: RPL36A-HNRNPH2 (RPL36A-HNRNPH2 readthrough [Source:HGNC Symbol;Acc:HGNC:48349])

HSP 1 Score: 157.918 bits (398), Expect = 3.220e-50
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKK 393
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+K
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100          
BLAST of 60S ribosomal protein L44 vs. Ensembl Celegans
Match: rpl-36.A (Ribosomal protein rpl-36.A [Source:UniProtKB/Swiss-Prot;Acc:P48166])

HSP 1 Score: 170.244 bits (430), Expect = 1.289e-55
Identity = 83/106 (78.30%), Postives = 94/106 (88.68%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK R+TFC + KC++HT HKVTQYK GK S +AQG+RRYDRKQSG+GGQTKPIFRKKAKTTKKIVLRMEC  CKHKKQ+ IKRCKHFELGG KK +GQ+IQF
Sbjct:    1 MVNVPKARRTFC-DGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105          
BLAST of 60S ribosomal protein L44 vs. Ensembl Celegans
Match: rpl-36.A (Ribosomal protein rpl-36.A [Source:UniProtKB/Swiss-Prot;Acc:P48166])

HSP 1 Score: 170.244 bits (430), Expect = 1.289e-55
Identity = 83/106 (78.30%), Postives = 94/106 (88.68%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK R+TFC + KC++HT HKVTQYK GK S +AQG+RRYDRKQSG+GGQTKPIFRKKAKTTKKIVLRMEC  CKHKKQ+ IKRCKHFELGG KK +GQ+IQF
Sbjct:    1 MVNVPKARRTFC-DGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105          
BLAST of 60S ribosomal protein L44 vs. Ensembl Fly
Match: RpL36A (gene:FBgn0031980 transcript:FBtr0079546)

HSP 1 Score: 160.999 bits (406), Expect = 5.794e-52
Identity = 81/106 (76.42%), Postives = 90/106 (84.91%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK R+TFCK  KCK H +HKVTQYK  K    AQG+RRYDRKQ G+GGQTKPIFRKKAKTTKKIVLRMEC  CK++KQ  +KRCKHFELGGDKK+KGQMIQF
Sbjct:    1 MVNVPKQRRTFCK--KCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104          
BLAST of 60S ribosomal protein L44 vs. Ensembl Fly
Match: RpL36A (gene:FBgn0031980 transcript:FBtr0345332)

HSP 1 Score: 160.999 bits (406), Expect = 5.794e-52
Identity = 81/106 (76.42%), Postives = 90/106 (84.91%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK R+TFCK  KCK H +HKVTQYK  K    AQG+RRYDRKQ G+GGQTKPIFRKKAKTTKKIVLRMEC  CK++KQ  +KRCKHFELGGDKK+KGQMIQF
Sbjct:    1 MVNVPKQRRTFCK--KCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQF 104          
BLAST of 60S ribosomal protein L44 vs. Ensembl Zebrafish
Match: rpl36a (ribosomal protein L36A [Source:NCBI gene;Acc:195819])

HSP 1 Score: 169.088 bits (427), Expect = 4.878e-55
Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Zebrafish
Match: rpl36a (ribosomal protein L36A [Source:NCBI gene;Acc:195819])

HSP 1 Score: 168.318 bits (425), Expect = 2.076e-54
Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = 1
Query:   97 VNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            VN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   24 VNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 128          
BLAST of 60S ribosomal protein L44 vs. Ensembl Zebrafish
Match: rpl36a (ribosomal protein L36A [Source:NCBI gene;Acc:195819])

HSP 1 Score: 166.777 bits (421), Expect = 9.446e-54
Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = 1
Query:   97 VNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            VN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   29 VNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 133          
BLAST of 60S ribosomal protein L44 vs. Ensembl Zebrafish
Match: rpl36a (ribosomal protein L36A [Source:NCBI gene;Acc:195819])

HSP 1 Score: 166.007 bits (419), Expect = 6.402e-53
Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = 1
Query:   97 VNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            VN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   61 VNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 165          
BLAST of 60S ribosomal protein L44 vs. Ensembl Zebrafish
Match: rpl36a (ribosomal protein L36A [Source:NCBI gene;Acc:195819])

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-17
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 1
Query:  277 AKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            AKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    9 AKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 55          
BLAST of 60S ribosomal protein L44 vs. Ensembl Xenopus
Match: rpl36a (ribosomal protein L36a [Source:NCBI gene;Acc:448673])

HSP 1 Score: 167.548 bits (423), Expect = 3.083e-54
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCGRHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVDSNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Xenopus
Match: rpl36a (ribosomal protein L36a [Source:NCBI gene;Acc:448673])

HSP 1 Score: 167.548 bits (423), Expect = 3.083e-54
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCGRHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVDSNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Mouse
Match: Rpl36al (ribosomal protein L36A-like [Source:MGI Symbol;Acc:MGI:1913733])

HSP 1 Score: 168.318 bits (425), Expect = 1.146e-54
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Mouse
Match: Rpl36al (ribosomal protein L36A-like [Source:MGI Symbol;Acc:MGI:1913733])

HSP 1 Score: 168.318 bits (425), Expect = 1.146e-54
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Mouse
Match: Rpl36al (ribosomal protein L36A-like [Source:MGI Symbol;Acc:MGI:1913733])

HSP 1 Score: 168.318 bits (425), Expect = 1.146e-54
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Mouse
Match: Rpl36a (ribosomal protein L36A [Source:MGI Symbol;Acc:MGI:1201789])

HSP 1 Score: 168.318 bits (425), Expect = 1.146e-54
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KC +H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Mouse
Match: Rpl36a-ps1 (ribosomal protein L36A, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642585])

HSP 1 Score: 162.155 bits (409), Expect = 3.156e-52
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK R+TFCK  KC +H  HKVTQYK GK SLYAQGK+RYDRKQS YGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKIRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKQRYDRKQSSYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. UniProt/SwissProt
Match: sp|P48166|RL36A_CAEEL (Ribosomal protein rpl-36.A OS=Caenorhabditis elegans OX=6239 GN=rpl-36.A PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.640e-54
Identity = 83/106 (78.30%), Postives = 94/106 (88.68%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK R+TFC + KC++HT HKVTQYK GK S +AQG+RRYDRKQSG+GGQTKPIFRKKAKTTKKIVLRMEC  CKHKKQ+ IKRCKHFELGG KK +GQ+IQF
Sbjct:    1 MVNVPKARRTFC-DGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105          
BLAST of 60S ribosomal protein L44 vs. UniProt/SwissProt
Match: sp|P61486|RL36A_TAKRU (60S ribosomal protein L36a OS=Takifugu rubripes OX=31033 GN=rpl36a PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.683e-54
Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. UniProt/SwissProt
Match: sp|P61487|RL36A_ICTPU (60S ribosomal protein L36a OS=Ictalurus punctatus OX=7998 GN=rpl36a PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.683e-54
Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. UniProt/SwissProt
Match: sp|P61485|RL36A_DANRE (60S ribosomal protein L36a OS=Danio rerio OX=7955 GN=rpl36a PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.683e-54
Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. UniProt/SwissProt
Match: sp|P90702|RL44_BRUMA (60S ribosomal protein L44 OS=Brugia malayi OX=6279 GN=rpl-44 PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 6.963e-54
Identity = 82/106 (77.36%), Postives = 93/106 (87.74%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFC + KC++HTMHKVTQYK GK S  AQG+RRYD KQ G+GGQTKPIFRKKAKTTKKIVLRMEC  CKH+KQ+ IKRCKHFELGG KK +GQ+IQF
Sbjct:    1 MVNVPKTRRTFC-DGKCRRHTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKHRKQLPIKRCKHFELGGQKKTRGQVIQF 105          
BLAST of 60S ribosomal protein L44 vs. TrEMBL
Match: A0A504YIE6 (Ribosomal protein L44 OS=Fasciola gigantica OX=46835 GN=FGIG_04833 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.650e-62
Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVNIPK+R+TFC +SKCK+HT+HKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPI RKKAKTTKKIVLRMEC  CK+KKQ+AIKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MVNIPKSRRTFCASSKCKKHTLHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPILRKKAKTTKKIVLRMECSVCKYKKQLAIKRCKHFELGGDKKKKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. TrEMBL
Match: A0A2H1BRD0 (Ribosomal protein L44 OS=Fasciola hepatica OX=6192 GN=D915_011006 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.650e-62
Identity = 95/106 (89.62%), Postives = 102/106 (96.23%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVNIPK+R+TFC +SKCK+HT+HKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPI RKKAKTTKKIVLRMEC  CK+KKQ+AIKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MVNIPKSRRTFCASSKCKKHTLHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPILRKKAKTTKKIVLRMECSVCKYKKQLAIKRCKHFELGGDKKKKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. TrEMBL
Match: A0A0X3P0J0 (60S ribosomal protein L36a OS=Schistocephalus solidus OX=70667 GN=RL36A PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 6.246e-62
Identity = 95/106 (89.62%), Postives = 103/106 (97.17%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVNIPKTRKTFCK+SKCK+HT+HKV+QYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC  CK+K+Q+ IKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MVNIPKTRKTFCKSSKCKKHTLHKVSQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECTECKYKQQLRIKRCKHFELGGDKKKKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. TrEMBL
Match: A0A3P7NA03 (Uncharacterized protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS17163 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 6.598e-62
Identity = 95/106 (89.62%), Postives = 103/106 (97.17%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVNIPKTRKTFCK+SKCK+HT+HKV+QYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC  CK+K+Q+ IKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MVNIPKTRKTFCKSSKCKKHTLHKVSQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECTECKYKQQLKIKRCKHFELGGDKKKKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. TrEMBL
Match: A0A5J4N341 (Large subunit ribosomal protein L44e OS=Paragonimus westermani OX=34504 GN=DEA37_0010051 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.105e-61
Identity = 96/106 (90.57%), Postives = 102/106 (96.23%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVNIPK+R+TFC +SKCK+HT+HKVTQYKAGKASL+AQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC  CK KKQIAIKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MVNIPKSRRTFCASSKCKKHTIHKVTQYKAGKASLHAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECSQCKFKKQIAIKRCKHFELGGDKKKKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Cavefish
Match: rpl36a (60S ribosomal protein L36a [Source:NCBI gene;Acc:103023967])

HSP 1 Score: 169.088 bits (427), Expect = 4.134e-55
Identity = 86/108 (79.63%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:    1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Cavefish
Match: rpl36a (60S ribosomal protein L36a [Source:NCBI gene;Acc:103023967])

HSP 1 Score: 167.162 bits (422), Expect = 5.628e-54
Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = 1
Query:   97 VNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            VN+PKTR+T+CK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   22 VNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 126          
BLAST of 60S ribosomal protein L44 vs. Ensembl Cavefish
Match: ENSAMXT00000030450.1 (pep primary_assembly:Astyanax_mexicanus-2.0:5:27685775:27689805:1 gene:ENSAMXG00000040813.1 transcript:ENSAMXT00000030450.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 70.0922 bits (170), Expect = 1.484e-16
Identity = 34/52 (65.38%), Postives = 45/52 (86.54%), Query Frame = 1
Query:  262 IFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            ++ KK+KTTKKIVL +EC   +C+ K+ +AIKRCKHFELGGDKK+KG++IQF
Sbjct:   19 LWVKKSKTTKKIVLWLECVQPNCRSKRILAIKRCKHFELGGDKKRKGKVIQF 70          
BLAST of 60S ribosomal protein L44 vs. Ensembl Yeast
Match: RPL42A (Ribosomal 60S subunit protein L42A; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42A has a paralog, RPL42B, that arose from the whole genome duplication [Source:SGD;Acc:S000005106])

HSP 1 Score: 153.295 bits (386), Expect = 9.610e-50
Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTRKT+CK   C++HT HKVTQYKAGKASL+AQGKRRYDRKQSG+GGQTKP+F KKAKTTKK+VLR+EC  CK + Q+ +KRCKHFELGG+KK+KGQ +QF
Sbjct:    1 MVNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQALQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Yeast
Match: RPL42B (Ribosomal 60S subunit protein L42B; required for propagation of the killer toxin-encoding M1 double-stranded RNA satellite of the L-A double-stranded RNA virus; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42B has a paralog, RPL42A, that arose from the whole genome duplication [Source:SGD;Acc:S000001183])

HSP 1 Score: 153.295 bits (386), Expect = 9.610e-50
Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTRKT+CK   C++HT HKVTQYKAGKASL+AQGKRRYDRKQSG+GGQTKP+F KKAKTTKK+VLR+EC  CK + Q+ +KRCKHFELGG+KK+KGQ +QF
Sbjct:    1 MVNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQALQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Nematostella
Match: EDO38414 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD22])

HSP 1 Score: 181.8 bits (460), Expect = 1.717e-60
Identity = 86/106 (81.13%), Postives = 98/106 (92.45%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PK RKTFCK  KC++HT+HKVTQYK GKASL+AQGKRRYDRKQSG+GGQTKP+F KKAKTTKKIVLRMEC  CK++KQ+ +KRCKHFELGGDKK+KGQMIQF
Sbjct:    1 MVNVPKQRKTFCKGKKCRRHTLHKVTQYKTGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRMECTQCKYRKQMPLKRCKHFELGGDKKRKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. Ensembl Nematostella
Match: EDO38415 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD23])

HSP 1 Score: 77.0258 bits (188), Expect = 7.322e-20
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 1
Query:  277 AKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            AKTTKKIVLRMEC  CK++KQ+ +KRCKHFELGGDKK KGQMIQF
Sbjct:   15 AKTTKKIVLRMECTQCKYRKQMPLKRCKHFELGGDKKCKGQMIQF 59          
BLAST of 60S ribosomal protein L44 vs. Ensembl Medaka
Match: RPL36A (60S ribosomal protein L36a [Source:NCBI gene;Acc:101168792])

HSP 1 Score: 171.014 bits (432), Expect = 3.427e-55
Identity = 87/108 (80.56%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   41 MVNVPKTRRTFCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 146          
BLAST of 60S ribosomal protein L44 vs. Ensembl Medaka
Match: RPL36A (60S ribosomal protein L36a [Source:NCBI gene;Acc:101168792])

HSP 1 Score: 171.4 bits (433), Expect = 4.409e-55
Identity = 87/108 (80.56%), Postives = 97/108 (89.81%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMEC--QSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVN+PKTR+TFCK  KCK+H  HKVTQYK GK SLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLR+EC   +C+ K+ +AIKRCKHFELGGDKK+KGQ+IQF
Sbjct:   66 MVNVPKTRRTFCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 171          
BLAST of 60S ribosomal protein L44 vs. Planmine SMEST
Match: SMESG000026827.1 (SMESG000026827.1)

HSP 1 Score: 212.616 bits (540), Expect = 2.159e-72
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1
Query:   94 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 106          
BLAST of 60S ribosomal protein L44 vs. Planmine SMEST
Match: SMESG000026827.1 (SMESG000026827.1)

HSP 1 Score: 169.474 bits (428), Expect = 1.442e-55
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1
Query:  157 MHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 411
            MHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF
Sbjct:    1 MHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKKGQMIQF 85          
The following BLAST results are available for this feature:
BLAST of 60S ribosomal protein L44 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPL36A9.219e-5579.63ribosomal protein L36a [Source:HGNC Symbol;Acc:HGN... [more]
RPL36A9.219e-5579.63ribosomal protein L36a [Source:HGNC Symbol;Acc:HGN... [more]
RPL36A1.669e-5479.63ribosomal protein L36a [Source:HGNC Symbol;Acc:HGN... [more]
RPL36AL2.918e-5478.70ribosomal protein L36a like [Source:HGNC Symbol;Ac... [more]
RPL36A-HNRNPH23.220e-5079.41RPL36A-HNRNPH2 readthrough [Source:HGNC Symbol;Acc... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl-36.A1.289e-5578.30Ribosomal protein rpl-36.A [Source:UniProtKB/Swis... [more]
rpl-36.A1.289e-5578.30Ribosomal protein rpl-36.A [Source:UniProtKB/Swis... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
RpL36A5.794e-5276.42gene:FBgn0031980 transcript:FBtr0079546[more]
RpL36A5.794e-5276.42gene:FBgn0031980 transcript:FBtr0345332[more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl36a4.878e-5579.63ribosomal protein L36A [Source:NCBI gene;Acc:19581... [more]
rpl36a2.076e-5479.44ribosomal protein L36A [Source:NCBI gene;Acc:19581... [more]
rpl36a9.446e-5479.44ribosomal protein L36A [Source:NCBI gene;Acc:19581... [more]
rpl36a6.402e-5379.44ribosomal protein L36A [Source:NCBI gene;Acc:19581... [more]
rpl36a1.706e-1774.47ribosomal protein L36A [Source:NCBI gene;Acc:19581... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl36a3.083e-5478.70ribosomal protein L36a [Source:NCBI gene;Acc:44867... [more]
rpl36a3.083e-5478.70ribosomal protein L36a [Source:NCBI gene;Acc:44867... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rpl36al1.146e-5479.63ribosomal protein L36A-like [Source:MGI Symbol;Acc... [more]
Rpl36al1.146e-5479.63ribosomal protein L36A-like [Source:MGI Symbol;Acc... [more]
Rpl36al1.146e-5479.63ribosomal protein L36A-like [Source:MGI Symbol;Acc... [more]
Rpl36a1.146e-5479.63ribosomal protein L36A [Source:MGI Symbol;Acc:MGI:... [more]
Rpl36a-ps13.156e-5276.85ribosomal protein L36A, pseudogene 1 [Source:MGI S... [more]
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BLAST of 60S ribosomal protein L44 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P48166|RL36A_CAEEL1.640e-5478.30Ribosomal protein rpl-36.A OS=Caenorhabditis elega... [more]
sp|P61486|RL36A_TAKRU3.683e-5479.6360S ribosomal protein L36a OS=Takifugu rubripes OX... [more]
sp|P61487|RL36A_ICTPU3.683e-5479.6360S ribosomal protein L36a OS=Ictalurus punctatus ... [more]
sp|P61485|RL36A_DANRE3.683e-5479.6360S ribosomal protein L36a OS=Danio rerio OX=7955 ... [more]
sp|P90702|RL44_BRUMA6.963e-5477.3660S ribosomal protein L44 OS=Brugia malayi OX=6279... [more]
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BLAST of 60S ribosomal protein L44 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A504YIE63.650e-6289.62Ribosomal protein L44 OS=Fasciola gigantica OX=468... [more]
A0A2H1BRD03.650e-6289.62Ribosomal protein L44 OS=Fasciola hepatica OX=6192... [more]
A0A0X3P0J06.246e-6289.6260S ribosomal protein L36a OS=Schistocephalus soli... [more]
A0A3P7NA036.598e-6289.62Uncharacterized protein OS=Dibothriocephalus latus... [more]
A0A5J4N3411.105e-6190.57Large subunit ribosomal protein L44e OS=Paragonimu... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl36a4.134e-5579.6360S ribosomal protein L36a [Source:NCBI gene;Acc:1... [more]
rpl36a5.628e-5479.4460S ribosomal protein L36a [Source:NCBI gene;Acc:1... [more]
ENSAMXT00000030450.11.484e-1665.38pep primary_assembly:Astyanax_mexicanus-2.0:5:2768... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 60S ribosomal protein L44 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPL42A9.610e-5075.47Ribosomal 60S subunit protein L42A; homologous to ... [more]
RPL42B9.610e-5075.47Ribosomal 60S subunit protein L42B; required for p... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO384141.717e-6081.13Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO384157.322e-2082.22Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 60S ribosomal protein L44 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
RPL36A3.427e-5580.5660S ribosomal protein L36a [Source:NCBI gene;Acc:1... [more]
RPL36A4.409e-5580.5660S ribosomal protein L36a [Source:NCBI gene;Acc:1... [more]
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BLAST of 60S ribosomal protein L44 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000026827.12.159e-72100.00SMESG000026827.1[more]
SMESG000026827.11.442e-55100.00SMESG000026827.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30011003 ID=SMED30011003|Name=60S ribosomal protein L44|organism=Schmidtea mediterranea sexual|type=transcript|length=454bp
TTTTAACCAAATTCAAATACATTAATTAAATTATATATATATTTAAAATA
TTGTTTAAATTTCTAAATTGTTAAAATTTCGTAATTTTTAAAAATGGTTA
ATATTCCAAAAACCAGAAAAACTTTTTGTAAAAACTCAAAATGCAAACAA
CATACCATGCATAAGGTTACCCAATACAAAGCTGGCAAGGCCAGTTTGTA
TGCCCAAGGAAAAAGACGTTACGACCGAAAACAGTCTGGTTATGGTGGTC
AAACTAAACCTATCTTCAGAAAGAAGGCTAAGACTACGAAGAAAATTGTT
TTGAGAATGGAATGCCAATCATGCAAACACAAGAAGCAAATTGCTATTAA
AAGATGTAAGCACTTCGAATTGGGTGGTGACAAAAAGAAGAAAGGTCAAA
TGATCCAGTTTTAAATGTAATTTAAAATAAAATTTGGAATATATCAAAAA
AAAA
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protein sequence of SMED30011003-orf-1

>SMED30011003-orf-1 ID=SMED30011003-orf-1|Name=SMED30011003-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=107bp
MVNIPKTRKTFCKNSKCKQHTMHKVTQYKAGKASLYAQGKRRYDRKQSGY
GGQTKPIFRKKAKTTKKIVLRMECQSCKHKKQIAIKRCKHFELGGDKKKK
GQMIQF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000240body wall musculature
PLANA:0000429neoblast
PLANA:0002032epidermal cell
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR000552Ribosomal_L44e
IPR011332Ribosomal_zn-bd
Vocabulary: biological process
TermDefinition
GO:0006412translation
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.450.80coord: 1..106
e-value: 8.1E-55
score: 185.7
NoneNo IPR availablePANTHERPTHR10369:SF34coord: 1..102
NoneNo IPR availablePRODOMPD002841coord: 10..93
e-value: 1.0E-35
score: 369.0
IPR000552Ribosomal protein L44ePFAMPF00935Ribosomal_L44coord: 19..94
e-value: 4.3E-36
score: 123.2
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 1..102
IPR000552Ribosomal protein L44ePROSITEPS01172RIBOSOMAL_L44Ecoord: 63..74
IPR011332Zinc-binding ribosomal proteinSUPERFAMILYSSF57829Zn-binding ribosomal proteinscoord: 2..94