Zinc finger, C2H2 type

Overview
NameZinc finger, C2H2 type
Smed IDSMED30010950
Length (bp)4049
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Zinc finger, C2H2 type (SMED30010950) t-SNE clustered cells

Violin plots show distribution of expression levels for Zinc finger, C2H2 type (SMED30010950) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Zinc finger, C2H2 type (SMED30010950) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Zinc finger, C2H2 type (SMED30010950) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30010950

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30010950SMESG000033448.1 SmedASXL_017952SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30010950SMESG000033448.1 dd_Smed_v4_11519_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Zinc finger, C2H2 type vs. TrEMBL
Match: A0A4S2L415 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010490 PE=4 SV=1)

HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0
Identity = 402/995 (40.40%), Postives = 553/995 (55.58%), Query Frame = 3 
Query: 1119 EFVSIPFDEDGFRTN-----NPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRR-----------------------SQRHALAKKKRAYS------VPNSK-------EPPVN------------KSPVK-------------------SEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFXX-XXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQT-------GTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLIST---NKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVED----RLKTFSKKNWEGKQRNSRT---SNYYSMVEQSMFAXXXXXXXXXXXXXXXXXIPTTIKPENISCDDTN----DDNFLANPVSEIIVPDEFFV---EIRQKQS-----EVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQNTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQSNQELTDFD 3797
            + VS PFDE  FR        PNI     +++++KM QF    + I+GKEN+ RIP CPEC KVF YG GDFKRH L+VHL++ +E++K+CL+FT LPKS +KFQE+QEQ+ MR ++P+ ++  + +VPLPYSIV LR+LT+ LP +T+++L +KM+ YS +S+I+      RR+ CN C+YSSP+ALADVRKHI+GSHCGISTKHFR CLQASRLDP E+TL SDDK+  LA D   R +H S    S   R                       S+ ++ +K + AY       VP SK        PP+              SP                     SE  + T  V N  L     +  L   ADS   L+LPFSE  + Q +      +  +  ++ KM +YS Y + R+CK DRT+AF+CPCGR+F T R PDLK+RAATLAD+RRHVMGVHA+IP   IT+CCQASRI RE DFQIY DDMLL+LA +R  K+          +  +S S  L + +        G S  +   ++  IN + L   M ++    +  NC S        + +E++L S     K   P  + +  L + Q               +S + ++ER+I+LPYS +AL  L +GYC PS+FPVL+EKM++YS +K+FI RR GRR FCCSGC SSSPHGMGD++KHILGVHA++PER+KAAAMHCSRLSRED +LLP+H+LL LAKMKWKG+VIKPLA+L +      R          G Q  S+    S  +   E+        +     + +   +   +  P+  +  D+N    D  F  +   + +   +F++    + + QS      + Y CS+C + S +VG ++ H+VR H+ +PAHTC  C Q F +    L HHE  H    +     G      SR ++ E+PI   I+S S E    L     +  Q    LTD D
Sbjct:  542 DLVSFPFDETKFRKELTGRIRPNI----LDSLVAKMHQFASYFVRILGKENHRRIPVCPECEKVFPYGLGDFKRHLLTVHLEVPREYLKDCLRFTYLPKSEEKFQEMQEQLAMRLMKPRLLEAGRRRVPLPYSIVILRRLTRHLPIATREFLEQKMQVYSRLSVIVDTRGGFRRYRCNHCSYSSPHALADVRKHILGSHCGISTKHFRHCLQASRLDPVEYTLFSDDKLARLARDFMHR-RHGSEAFQSVGDRSPSPNDSASQNGITECDSLDSSPSRANSDSKSQDAYVSHFTAVVPGSKNRVTVRIRPPIPPDDLTFSVPSSVASPTNGDMYSHSSPPHSPESPESFSEFHSSTATVDNLDLNALSSIPGLE-GADSIVDLSLPFSEPVLRQLMDAAGATKAHLDDMLAKMHIYSTYQMTRICKGDRTLAFRCPCGRLFITTRAPDLKIRAATLADSRRHVMGVHARIPHEFITICCQASRIAREYDFQIYPDDMLLRLAMDRPIKLTKLPPVGAPPSSRTSSSLPLPSAKPLAVNSPLGQSRTNDSSDHLDINSEGLDQSM-NMDSLELQSNC-SADGLHGLRDPNEDELASLADDKKNPKPPEDPICQLTLAQ---------------SSGTEEVERVINLPYSSDALHSLVEGYCPPSYFPVLEEKMDVYSAHKVFITRRRGRRYFCCSGCASSSPHGMGDIRKHILGVHAKVPERYKAAAMHCSRLSREDNTLLPNHVLLHLAKMKWKGTVIKPLADLDLSQFGTRRASAMGLVRPSGGQFASQVYQPSIQHRDSEKLTALSTTASSVKVNNVERGSSASPSKSPDYPATYDSNVPPIDVEFNHSGSEDKLDLGQFYIVRMNVDKDQSIAGHGSLVYACSVCLFFSTYVGAARAHVVRRHMRLPAHTCVYCHQAFKTGKEALKHHELTHAELDYVT---GEQLRTYSRAVL-EVPIK-DITSESTERVVELQQGLRT--QGLNRLTDED 1506
[Close]
BLAST of Zinc finger, C2H2 type vs. TrEMBL
Match: A0A4S2KY56 (C2H2-type domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010490 PE=4 SV=1)

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 402/995 (40.40%), Postives = 553/995 (55.58%), Query Frame = 3 
Query: 1119 EFVSIPFDEDGFRTN-----NPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRR-----------------------SQRHALAKKKRAYS------VPNSK-------EPPVN------------KSPVK-------------------SEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFXX-XXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQT-------GTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLIST---NKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVED----RLKTFSKKNWEGKQRNSRT---SNYYSMVEQSMFAXXXXXXXXXXXXXXXXXIPTTIKPENISCDDTN----DDNFLANPVSEIIVPDEFFV---EIRQKQS-----EVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQNTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQSNQELTDFD 3797
            + VS PFDE  FR        PNI     +++++KM QF    + I+GKEN+ RIP CPEC KVF YG GDFKRH L+VHL++ +E++K+CL+FT LPKS +KFQE+QEQ+ MR ++P+ ++  + +VPLPYSIV LR+LT+ LP +T+++L +KM+ YS +S+I+      RR+ CN C+YSSP+ALADVRKHI+GSHCGISTKHFR CLQASRLDP E+TL SDDK+  LA D   R +H S    S   R                       S+ ++ +K + AY       VP SK        PP+              SP                     SE  + T  V N  L     +  L   ADS   L+LPFSE  + Q +      +  +  ++ KM +YS Y + R+CK DRT+AF+CPCGR+F T R PDLK+RAATLAD+RRHVMGVHA+IP   IT+CCQASRI RE DFQIY DDMLL+LA +R  K+          +  +S S  L + +        G S  +   ++  IN + L   M ++    +  NC S        + +E++L S     K   P  + +  L + Q               +S + ++ER+I+LPYS +AL  L +GYC PS+FPVL+EKM++YS +K+FI RR GRR FCCSGC SSSPHGMGD++KHILGVHA++PER+KAAAMHCSRLSRED +LLP+H+LL LAKMKWKG+VIKPLA+L +      R          G Q  S+    S  +   E+        +     + +   +   +  P+  +  D+N    D  F  +   + +   +F++    + + QS      + Y CS+C + S +VG ++ H+VR H+ +PAHTC  C Q F +    L HHE  H    +     G      SR ++ E+PI   I+S S E    L     +  Q    LTD D
Sbjct:  657 DLVSFPFDETKFRKELTGRIRPNI----LDSLVAKMHQFASYFVRILGKENHRRIPVCPECEKVFPYGLGDFKRHLLTVHLEVPREYLKDCLRFTYLPKSEEKFQEMQEQLAMRLMKPRLLEAGRRRVPLPYSIVILRRLTRHLPIATREFLEQKMQVYSRLSVIVDTRGGFRRYRCNHCSYSSPHALADVRKHILGSHCGISTKHFRHCLQASRLDPVEYTLFSDDKLARLARDFMHR-RHGSEAFQSVGDRSPSPNDSASQNGITECDSLDSSPSRANSDSKSQDAYVSHFTAVVPGSKNRVTVRIRPPIPPDDLTFSVPSSVASPTNGDMYSHSSPPHSPESPESFSEFHSSTATVDNLDLNALSSIPGLE-GADSIVDLSLPFSEPVLRQLMDAAGATKAHLDDMLAKMHIYSTYQMTRICKGDRTLAFRCPCGRLFITTRAPDLKIRAATLADSRRHVMGVHARIPHEFITICCQASRIAREYDFQIYPDDMLLRLAMDRPIKLTKLPPVGAPPSSRTSSSLPLPSAKPLAVNSPLGQSRTNDSSDHLDINSEGLDQSM-NMDSLELQSNC-SADGLHGLRDPNEDELASLADDKKNPKPPEDPICQLTLAQ---------------SSGTEEVERVINLPYSSDALHSLVEGYCPPSYFPVLEEKMDVYSAHKVFITRRRGRRYFCCSGCASSSPHGMGDIRKHILGVHAKVPERYKAAAMHCSRLSREDNTLLPNHVLLHLAKMKWKGTVIKPLADLDLSQFGTRRASAMGLVRPSGGQFASQVYQPSIQHRDSEKLTALSTTASSVKVNNVERGSSASPSKSPDYPATYDSNVPPIDVEFNHSGSEDKLDLGQFYIVRMNVDKDQSIAGHGSLVYACSVCLFFSTYVGAARAHVVRRHMRLPAHTCVYCHQAFKTGKEALKHHELTHAELDYVT---GEQLRTYSRAVL-EVPIK-DITSESTERVVELQQGLRT--QGLNRLTDED 1621

HSP 2 Score: 91.6633 bits (226), Expect = 1.263e-14
Identity = 86/339 (25.37%), Postives = 147/339 (43.36%), Query Frame = 3 
Query:   81 IEESKGCFICVDCPN-------NFSFWNWEDFESH-SCVCEKKPYFECIYCGLLVLNKNGERHINMHF--QHQCYNLYNCSL---CT--FSTN----VEMQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHP-TKSHNFEITQFLTCSENSPDVS---LNSKLIEKFPDLGSILSIGSFKPYTNN---KKSTVLFLDCYKCDFSSIQWNSYVRHCFKC-----TAADDNIHRDAS------VYLCSYCSTLSTRKHLIDEHIC-ECDRSAKVIRETFPFRVVDEK-----PEPIVAKDDI 968
            +E S GCFIC  C +         SF +  DF++H S    +     C+YCG  V +     H+  HF  +     +Y C +   C+  F TN    +E  +           ST  +KC  C   F T+  + SH++  +  + +C    C  KS S+  + +H  + H   +S +  + + +    N  +V+   L+S   E   D    L++ S  P ++    + + V  L C  C+ S+++WN +  H   C     +A     H+ +S      VY CS C  +ST K+L+ EH+    +  A V+ E    R++D       P+P +++  I
Sbjct:   75 VERSAGCFICSACTDRNSALQRTTSFSDVSDFQAHISTQHAQLTQLSCVYCGWQVYSDRFVTHVVQHFLPRQGTGGIYACPVEPECSSRFCTNQFTLLEAHWFAQHPTEAQHQST--FKCPHCLRSFPTLSLWSSHLRRSVRSLVHCSAPGCFVKSPSRTLLLDHVNRMHTNNRSASVLLNETIEVVCNKQEVTPTKLDSSDTESV-DGHRNLTLLSKCPSSSKHELEPTFVFLLRCPYCNMSTVRWNHFQMHASTCPTALRSAKASKTHQTSSTTYRCRVYWCSECQAVSTEKYLVTEHVTFSHEGKAVVVHEKLHIRLLDSNLLSVLPDPPLSQSTI 410
[Close]
BLAST of Zinc finger, C2H2 type vs. TrEMBL
Match: A0A4S2KZE5 (C2H2-type domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010490 PE=4 SV=1)

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 402/995 (40.40%), Postives = 553/995 (55.58%), Query Frame = 3 
Query: 1119 EFVSIPFDEDGFRTN-----NPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRR-----------------------SQRHALAKKKRAYS------VPNSK-------EPPVN------------KSPVK-------------------SEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFXX-XXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQT-------GTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLIST---NKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVED----RLKTFSKKNWEGKQRNSRT---SNYYSMVEQSMFAXXXXXXXXXXXXXXXXXIPTTIKPENISCDDTN----DDNFLANPVSEIIVPDEFFV---EIRQKQS-----EVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQNTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQSNQELTDFD 3797
            + VS PFDE  FR        PNI     +++++KM QF    + I+GKEN+ RIP CPEC KVF YG GDFKRH L+VHL++ +E++K+CL+FT LPKS +KFQE+QEQ+ MR ++P+ ++  + +VPLPYSIV LR+LT+ LP +T+++L +KM+ YS +S+I+      RR+ CN C+YSSP+ALADVRKHI+GSHCGISTKHFR CLQASRLDP E+TL SDDK+  LA D   R +H S    S   R                       S+ ++ +K + AY       VP SK        PP+              SP                     SE  + T  V N  L     +  L   ADS   L+LPFSE  + Q +      +  +  ++ KM +YS Y + R+CK DRT+AF+CPCGR+F T R PDLK+RAATLAD+RRHVMGVHA+IP   IT+CCQASRI RE DFQIY DDMLL+LA +R  K+          +  +S S  L + +        G S  +   ++  IN + L   M ++    +  NC S        + +E++L S     K   P  + +  L + Q               +S + ++ER+I+LPYS +AL  L +GYC PS+FPVL+EKM++YS +K+FI RR GRR FCCSGC SSSPHGMGD++KHILGVHA++PER+KAAAMHCSRLSRED +LLP+H+LL LAKMKWKG+VIKPLA+L +      R          G Q  S+    S  +   E+        +     + +   +   +  P+  +  D+N    D  F  +   + +   +F++    + + QS      + Y CS+C + S +VG ++ H+VR H+ +PAHTC  C Q F +    L HHE  H    +     G      SR ++ E+PI   I+S S E    L     +  Q    LTD D
Sbjct:  803 DLVSFPFDETKFRKELTGRIRPNI----LDSLVAKMHQFASYFVRILGKENHRRIPVCPECEKVFPYGLGDFKRHLLTVHLEVPREYLKDCLRFTYLPKSEEKFQEMQEQLAMRLMKPRLLEAGRRRVPLPYSIVILRRLTRHLPIATREFLEQKMQVYSRLSVIVDTRGGFRRYRCNHCSYSSPHALADVRKHILGSHCGISTKHFRHCLQASRLDPVEYTLFSDDKLARLARDFMHR-RHGSEAFQSVGDRSPSPNDSASQNGITECDSLDSSPSRANSDSKSQDAYVSHFTAVVPGSKNRVTVRIRPPIPPDDLTFSVPSSVASPTNGDMYSHSSPPHSPESPESFSEFHSSTATVDNLDLNALSSIPGLE-GADSIVDLSLPFSEPVLRQLMDAAGATKAHLDDMLAKMHIYSTYQMTRICKGDRTLAFRCPCGRLFITTRAPDLKIRAATLADSRRHVMGVHARIPHEFITICCQASRIAREYDFQIYPDDMLLRLAMDRPIKLTKLPPVGAPPSSRTSSSLPLPSAKPLAVNSPLGQSRTNDSSDHLDINSEGLDQSM-NMDSLELQSNC-SADGLHGLRDPNEDELASLADDKKNPKPPEDPICQLTLAQ---------------SSGTEEVERVINLPYSSDALHSLVEGYCPPSYFPVLEEKMDVYSAHKVFITRRRGRRYFCCSGCASSSPHGMGDIRKHILGVHAKVPERYKAAAMHCSRLSREDNTLLPNHVLLHLAKMKWKGTVIKPLADLDLSQFGTRRASAMGLVRPSGGQFASQVYQPSIQHRDSEKLTALSTTASSVKVNNVERGSSASPSKSPDYPATYDSNVPPIDVEFNHSGSEDKLDLGQFYIVRMNVDKDQSIAGHGSLVYACSVCLFFSTYVGAARAHVVRRHMRLPAHTCVYCHQAFKTGKEALKHHELTHAELDYVT---GEQLRTYSRAVL-EVPIK-DITSESTERVVELQQGLRT--QGLNRLTDED 1767

HSP 2 Score: 91.6633 bits (226), Expect = 1.440e-14
Identity = 86/339 (25.37%), Postives = 147/339 (43.36%), Query Frame = 3 
Query:   81 IEESKGCFICVDCPN-------NFSFWNWEDFESH-SCVCEKKPYFECIYCGLLVLNKNGERHINMHF--QHQCYNLYNCSL---CT--FSTN----VEMQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHP-TKSHNFEITQFLTCSENSPDVS---LNSKLIEKFPDLGSILSIGSFKPYTNN---KKSTVLFLDCYKCDFSSIQWNSYVRHCFKC-----TAADDNIHRDAS------VYLCSYCSTLSTRKHLIDEHIC-ECDRSAKVIRETFPFRVVDEK-----PEPIVAKDDI 968
            +E S GCFIC  C +         SF +  DF++H S    +     C+YCG  V +     H+  HF  +     +Y C +   C+  F TN    +E  +           ST  +KC  C   F T+  + SH++  +  + +C    C  KS S+  + +H  + H   +S +  + + +    N  +V+   L+S   E   D    L++ S  P ++    + + V  L C  C+ S+++WN +  H   C     +A     H+ +S      VY CS C  +ST K+L+ EH+    +  A V+ E    R++D       P+P +++  I
Sbjct:  221 VERSAGCFICSACTDRNSALQRTTSFSDVSDFQAHISTQHAQLTQLSCVYCGWQVYSDRFVTHVVQHFLPRQGTGGIYACPVEPECSSRFCTNQFTLLEAHWFAQHPTEAQHQST--FKCPHCLRSFPTLSLWSSHLRRSVRSLVHCSAPGCFVKSPSRTLLLDHVNRMHTNNRSASVLLNETIEVVCNKQEVTPTKLDSSDTESV-DGHRNLTLLSKCPSSSKHELEPTFVFLLRCPYCNMSTVRWNHFQMHASTCPTALRSAKASKTHQTSSTTYRCRVYWCSECQAVSTEKYLVTEHVTFSHEGKAVVVHEKLHIRLLDSNLLSVLPDPPLSQSTI 556
[Close]
BLAST of Zinc finger, C2H2 type vs. TrEMBL
Match: A0A5J4NZT1 (C2H2-type domain-containing protein (Fragment) OS=Paragonimus westermani OX=34504 GN=DEA37_0013953 PE=4 SV=1)

HSP 1 Score: 635.18 bits (1637), Expect = 0.000e+0
Identity = 400/988 (40.49%), Postives = 544/988 (55.06%), Query Frame = 3 
Query: 1095 CEELEVNTEFVSIPFDEDGFRTN-NPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRR--------------------TKHKSFG-----VSSHNRRSQRHALAKKKRAYS------VPNSKE-------------------------PPVNKSPVKSEIVTQTPPVSNHSLGG------RKGVNALYLN----------ADSNHSLTLPFXXXXXXX-XXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLG-----DENSAINDQDLSSPMPSICENSVS-----ENCVSKTNCFLTANFSEED--LISTNKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLA----SESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVEDRLKTFSKKNWEGKQRNSRTSNYYSMVEQSMF-------------AXXXXXXXXXXXXXXXXXIPTTIKPENISC--DDTNDD---NFLANP------VSEIIVPDEFFVEIRQKQS-------EVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQNTTFTL-AHYGPYKIAMSRIIVKEL 3692
            C+      + VS PFDE  FR+  + +I     +++++KM QF+   + I+GKEN+ RIP CPEC KVF YG GDFKRH L+VHL++ +E++K+CL+FT LPKS +KFQE+QEQ+ MR ++P+ ++  + +VPLPYSI+ LR+LT+ LP  T+++L  KM+ YS +S+I+      RR+ CN C+YSSP+ALADVRKHI+GSHCGISTKHFR CLQASRLDP EF L SD+K+  LA+D   R                    T H  F      VSS +     H   K +  Y       VP SK                          PPV  SP    +   TPP S  S            V++L LN          AD    L LPFSE VL+  + Q    +  +  ++ KM++YS Y++ R+CK DRT+AF+CPCGR+F T R PD K+RAATLAD+RRHVMGVHA+IP   IT+CCQASRI RE DF+IY DDMLL+LA +R  K+ +    S  V+  SS    L+  +      DLG         A  + +         +NSVS        VS  + F     S ED  L     +E+P             K ++ + E  +S L+    S + ++ER+I LPYS EAL  L +GYC PS+FP+L+EKM++YS  K+FI RR GRR FCCSGC SSSPHGMGD++KHILGVHA++PER+KAAAMHCSRLSRED +LLP+H+LL LAKMKWKG+VIKPLAE+     L  F  +         +T  + S V Q                A +        S+  L    +++     SC  DD  +D   +F++ P       +E      + + +    S        + Y CS C + S +   ++ HIVR H+ +PA+ C  C+Q F +    L HH+  H    F +  H   Y+  MS+I V ++
Sbjct:  265 CDTGRAGDDLVSFPFDETKFRSELSKHIRSNVLDSLVTKMYQFSSYFVRILGKENHRRIPVCPECDKVFPYGLGDFKRHLLTVHLEVPREYLKDCLRFTYLPKSEEKFQEVQEQLAMRQMKPRLLEAGRRRVPLPYSIIILRRLTRHLPIGTREFLEHKMQLYSRLSVIVDTRGGLRRYRCNHCSYSSPHALADVRKHILGSHCGISTKHFRHCLQASRLDPVEFILFSDEKLARLAKDYMHRQHGSEAFISTGSRSPSPDDGTSHNGFTELDSVVSSTSNSDSEH---KPQDTYVSHFTAVVPGSKNRVTVRIRPPVPPDSVNAQGTNAVVGPPVVASPSTINLSPATPPRSPDSPDSLFEPQPANVVDSLDLNTLPSIPGFEGADRVVHLALPFSEPVLRQLMNQAGATKAHMDEILSKMRIYSTYTMSRICKGDRTIAFRCPCGRLFMTTRQPDSKIRAATLADSRRHVMGVHARIPHEFITLCCQASRITREYDFEIYPDDMLLRLAMDRPIKLTNLPPASCPVSRPSSSLPPLRPLR------DLGLNAPASGKYATTEDNFEPSQSDTMDNSVSVDNSEAQSVSSADGFGGPRDSVEDDRLTIVEDKESPE---------STDKKASKSIEDPLSHLSLAQSSPNEEVERVIDLPYSSEALHSLVEGYCPPSYFPILEEKMDVYSSLKVFISRRRGRRYFCCSGCSSSSPHGMGDIRKHILGVHAKVPERYKAAAMHCSRLSREDNTLLPNHVLLHLAKMKWKGTVIKPLAEMD----LSQFGARRASAVGLVRQTGQFASQVYQPSTQHRDSEKLTALPSAASTAGAGHRSSTAGLDKFRSSLYSTVASCAFDDQTEDTEFDFVSEPHERESGNNESDEAQPYVIRMNADPSGKITEGCALVYACSACPFLSNYASAARAHIVRTHIHLPAYDCPHCDQTFQTSKDALNHHQTVHTRLDFAVDQHRMVYRDFMSKISVTDI 1230
[Close]
BLAST of Zinc finger, C2H2 type vs. TrEMBL
Match: G7YG13 (C2H2-type domain-containing protein OS=Clonorchis sinensis OX=79923 GN=CLF_106977 PE=4 SV=1)

HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0
Identity = 397/966 (41.10%), Postives = 545/966 (56.42%), Query Frame = 3 
Query: 1119 EFVSIPFDEDGFRTN-----NPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRR-----------------------SQRHALAKKKRAYS------VPNSK-------EPPVN------------KSPVK-------------------SEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFXX-XXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKI------------QDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLIST---NKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVED----RLKTFSKKNWEGKQRNSRT---SNYYSMVEQSMFAXXXXXXXXXXXXXXXXXIPTTIKPENISCDDTN----DDNFLANPVSEIIVPDEFFV---EIRQKQS-----EVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQNTTF-TLAHYGPYKIAMSRIIVKEL 3692
            + VS PFDE  FR        PNI     +++++KM QF    + I+GKEN+ RIP CPEC KVF YG GDFKRH L+VHL++ +E++K+CL+FT LPKS +KFQE+QEQ+ MR ++P+ ++  + +VPLPYSIV LR+LT+ LP +T+++L +KM+ YS +S+I+      RR+ CN C+YSSP+ALADVRKHI+GSHCGISTKHFR CLQASRLDP E+TL SDDK+  LA D   R +H S    S   R                       S  ++ +K + AY       VP SK        PP+              SP                     SE  + T  V N  L     +  L   ADS   L+LPFSE  + Q +      +  +  ++ KM +YS Y + R+CK DRT+AF+CPCGR+F T R PDLK+RAATLAD+RRHVMGVHA+IP   IT+CCQASRI RE DFQIY DDMLL+LA +R  K+            + S S S   A   + +  L   +T  SS  L D NS   DQ ++  M S+    +  NC S        + +E++L S     K   P  + +  L + Q               +S + ++ER+I+LPYS +AL  L +GYC PS+FPVL+EKM++YS +K+FI RR GRR FCCSGC SSSPHGMGD++KHILGVHA++PER+KAAAMHCSRLSRED +LLP+H+LL LAKMKWKG+VIKPLA+L +      R          G Q  S+    S  +   E+        + +   + +   +   +  P+  +  D+N    D  F  +   + +   +F++    + + QS      + Y CS+C + S +VG ++ H+VR H+ +PAHTC  C Q F +    L HHE  H    + T      Y  A+  + +K++
Sbjct:  655 DLVSFPFDETKFRKELTGRIRPNI----LDSLVAKMHQFASYFVRILGKENHRRIPVCPECEKVFPYGLGDFKRHLLTVHLEVPREYLKDCLRFTYLPKSEEKFQEMQEQLAMRLMKPRLLEAGRRRVPLPYSIVILRRLTRHLPIATREFLEQKMQVYSRLSVIVDTRGGFRRYRCNHCSYSSPHALADVRKHILGSHCGISTKHFRHCLQASRLDPVEYTLFSDDKLARLARDFMHR-RHGSEAFQSVGDRSPSPNDSASQNGITECDSLDSSPSHANSDSKSQDAYVSHFTAVVPGSKNRVTVRIRPPIPPDDLTFSVPSSVASPTNGDMYSHSSPPHSPESPESFSEFHSSTATVDNLDLNALSSIPGLE-GADSIVDLSLPFSEPVLRQLMDAAGATKAHLDDMLAKMHIYSTYQMTRICKGDRTLAFRCPCGRLFITTRAPDLKIRAATLADSRRHVMGVHARIPHEFITICCQASRIAREYDFQIYPDDMLLRLAMDRPIKLTKLPPVGAPPSGRTSLSLSLSSAKPLAVNSPLGQSRTNDSSDHL-DINSEGLDQSIN--MDSL---ELQSNC-STDGLHGLRDPNEDELASLADDKKNPKPPEDPICQLTLAQ---------------SSGTEEVERVINLPYSSDALHSLVEGYCPPSYFPVLEEKMDVYSAHKVFITRRRGRRYFCCSGCASSSPHGMGDIRKHILGVHAKVPERYKAAAMHCSRLSREDNTLLPNHVLLHLAKMKWKGTVIKPLADLDLSQFGTRRASAMGLVRPSGGQFASQVYQPSIQHRDSEKLTALSTTASSTKVNNVERGASASPSKSPDYPATYDSNVPPIDVEFNHSGSEDKLDLGQFYIVRMNVDKDQSITGHGSLVYACSVCLFFSTYVGAARAHVVRRHMRLPAHTCVYCHQTFKTGKEALKHHELTHAELDYVTGEQLRTYSRAVLEVPIKDI 1592

HSP 2 Score: 92.8189 bits (229), Expect = 5.756e-15
Identity = 84/338 (24.85%), Postives = 144/338 (42.60%), Query Frame = 3 
Query:   81 IEESKGCFICVDCPN-------NFSFWNWEDFESH-SCVCEKKPYFECIYCGLLVLNKNGERHINMHF--QHQCYNLYNCSL---CT--FSTN----VEMQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCH-PTKSHNFEITQFLTCSENSPDVS---LNSKLIEKFPDLGSILSIGSFKPYTNN--KKSTVLFLDCYKCDFSSIQWNSYVRHCFKC-----TAADDNIHRDAS------VYLCSYCSTLSTRKHLIDEHIC-ECDRSAKVIRETFPFRVVDEK-----PEPIVAKDDI 968
            +E S GCFIC  C +         SF +  DF++H S    +     C+YCG  V +     H+  HF  +     +Y C +   C+  F TN    +E  +           +T  +KC  C   F T+  + SH++  +  + +C    C  KS S+  + +H  + H  T+S +  + + +    N  +V+   L+S   E   +  ++  +        N  + + V  L C  C+ S+++WN +  H   C     +A     H  +S      VY CS C  +ST KHL+ EH+    +  A V+ E    R++D       P+P +++  I
Sbjct:   75 VERSAGCFICSACTDRNSALQRTTSFSDVSDFQAHISTQHAQLTQLSCVYCGWQVYSDRFVTHVVQHFLPRQGTGGIYACPVEPECSNRFCTNQFTLLEAHWFAQHPTEAQHQNT--FKCPHCLRSFPTLSLWSSHLRRSVRSLIHCSAPGCFVKSPSRTLLLDHVNRMHTSTRSASVLLNETIEVVCNKQEVTPTKLDSSDTESVDEHRNLTLLNKCHSSAKNELEPTFVFLLRCPYCNMSTVRWNHFQMHASTCPTALRSAKASKPHPTSSTAYRCRVYWCSECQAVSTEKHLVTEHVTFSHEGKAVVVHEKLHIRLLDSNLLSVLPDPSLSQSTI 410
[Close]
BLAST of Zinc finger, C2H2 type vs. Planmine SMEST
Match: SMESG000033448.1 (SMESG000033448.1)

HSP 1 Score: 2508.41 bits (6500), Expect = 0.000e+0
Identity = 1254/1257 (99.76%), Postives = 1255/1257 (99.84%), Query Frame = 3 
Query:   39 QPEFYKYFLQNVTRIEESKGCFICVDCPNNFSFWNWEDFESHSCVCEKKPYFECIYCGLLVLNKNGERHINMHFQHQCYNLYNCSLCTFSTNVEMQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHPTKSHNFEITQFLTCSENSPDVSLNSKLIEKFPDLGSILSIGSFKPYTNNKKSTVLFLDCYKCDFSSIQWNSYVRHCFKCTAADDNIHRDASVYLCSYCSTLSTRKHLIDEHICECDRSAKVIRETFPFRVVDEKPEPIVAKDDIIRPSKRCRSVNSCTNELPATKRPRISESPDSKCKTEEAVVSDCEELEVNTEFVSIPFDEDGFRTNNPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRRSQRHALAKKKRAYSVPNSKEPPVNKSPVKSEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFXXXXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLISTNKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVEDRLKTFSKKNWEGKQRNSRTSNYYSMVEQSMFAXXXXXXXXXXXXXXXXXIPTTIKPENISCDDTNDDNFLANPVSEIIVPDEFFVEIRQKQSEVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQNTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQSNQELTDFDMYLI 3809
            QPEFYKYFLQNVTRIEESKGCFICVDCPNNFSFWNWEDFESHSCVCEKKPYFECIYCGLLVLNKNGERHINMHFQHQCYNLYNCSLCTFSTNVEMQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHPTKSHNFEITQFLTCSENSPDVSLNSKLIEKFPDLGSILSIGSFKPYTNNKKSTVLFLDCYKCDFSSIQWNSYVRHCFKCTAADDNIHRDASVYLCSYCSTLSTRKHLIDEHICECDRSAKVIRETFPFRVV+EKPEPIVAKDDIIRPSKRCRSVNSCTNELPATKRPRISESPDSKCKTEEAVVSDCEELEVNTEFVSIPFDEDGFRTNNPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRRSQRHALAKKKRAYSVPNSKEPPVNKSPVK EIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFSESVLQSLLQQLIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLISTNKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFCCSGCPSSSPHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVEDRLKTFSKKNWEGKQRNSRTSNYYSMVEQSMFALNNLNKSSEKSSDSLKNIPTTIKPENISCDDTNDDNFLANPVSEIIVPDEFFVEIRQKQSEVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDH NTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQSNQELTDFDMYLI
Sbjct:    7 QPEFYKYFLQNVTRIEESKGCFICVDCPNNFSFWNWEDFESHSCVCEKKPYFECIYCGLLVLNKNGERHINMHFQHQCYNLYNCSLCTFSTNVEMQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHPTKSHNFEITQFLTCSENSPDVSLNSKLIEKFPDLGSILSIGSFKPYTNNKKSTVLFLDCYKCDFSSIQWNSYVRHCFKCTAADDNIHRDASVYLCSYCSTLSTRKHLIDEHICECDRSAKVIRETFPFRVVNEKPEPIVAKDDIIRPSKRCRSVNSCTNELPATKRPRISESPDSKCKTEEAVVSDCEELEVNTEFVSIPFDEDGFRTNNPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRRSQRHALAKKKRAYSVPNSKEPPVNKSPVKFEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFSESVLQSLLQQLIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLISTNKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFCCSGCPSSSPHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVEDRLKTFSKKNWEGKQRNSRTSNYYSMVEQSMFALNNLNKSSEKSSDSLKNIPTTIKPENISCDDTNDDNFLANPVSEIIVPDEFFVEIRQKQSEVAYKCSMCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHPNTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQSNQELTDFDMYLI 1263
[Close]
BLAST of Zinc finger, C2H2 type vs. Planmine SMEST
Match: SMESG000075452.1 (SMESG000075452.1)

HSP 1 Score: 145.206 bits (365), Expect = 3.070e-35
Identity = 92/295 (31.19%), Postives = 150/295 (50.85%), Query Frame = 3 
Query: 2262 TLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGDENSAINDQDLSSPMPSICENSVSENCVSKTNCFLTANFSEEDLISTNKEETPSFNFVSDLAVEQQKYSAIAEESAVSRLAS---ESSKIERIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAK--MKWK 3131
            +LAD R+H++G H  +  S   +C +ASR+   N F ++SD  L+  A+E+  + +            S    D   D +    +D  +         +S P+  +  +S +   + +                            + L   Q   + +  +S V  +      + KI+R+IHL YS   L+ L  G C   + P+LQ+KM++Y+ ++I + RR G+R F CS CP+ SPHGM D++KHILGVHAR+PERFKAAAM+CSR++R++  LL D  LL+  +  ++W+
Sbjct:  277 SLADVRKHILGCHCSVSTSYTRLCLRASRL-DTNTFSLFSDRKLISFANEKLKRAE------------SGTGWDANGDTSAMQLLDDSEPEQESPIDTISRPIKRVAISSGAVGSIKR----------------------------AKLTQRQSHSAKMRPDSPVPEVGQPLERNEKIDRVIHLNYSWHVLERLVAGQCPERYLPILQQKMDVYALHRILLTRRNGKRYFLCSHCPNCSPHGMNDIRKHILGVHARLPERFKAAAMYCSRMNRDNYGLLSDDELLKKNQDMVRWR 530

HSP 2 Score: 125.176 bits (313), Expect = 8.258e-29
Identity = 115/422 (27.25%), Postives = 188/422 (44.55%), Query Frame = 3 
Query: 1272 ECPECHKVFSYG---FGDFKRHFLSV-HLDIEKEFIK------------------ECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVP---------LPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRRSQRHALAKKKRAYSVP-NSKEPPVNKSPVKSEIVTQTPPVSNHSLGGRKGVNA--------------LYLNADSNHSLTLPFXXXXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQ 2399
            +CP C   FS        FK+HFL + H   E  F+K                   C+K   L    ++     +   + +L+       KI  P         LPYS   L +L+    +  ++ L+ KM  YS   + ++  D  ++F+C+ C Y S ++LADVRKHI+G HC +ST + R CL+ASRLD N F+L SD K+++ A +  +R +  + G  ++   S    L   +     P ++   P+ +  + S  V     +    L  R+  +A              L  N   +  + L +S  VL+ L+    PE  +P L QKM +   Y+L R+  + R         R F  +  P+       + D R+H++GVHA++P+         SR+ R+N + + SDD LL+
Sbjct:  116 DCPHCRNQFSDRTDLLTHFKKHFLCIFHCSFENCFVKSHNMIGVLAHMKRMHNGSRCMKVECLITCTERISFKSQCNCLASLQQSPQSPMKINSPSVDDCQMIALPYSTRVLSKLSSGFDERLREDLTCKMAQYSKFKVRLEIVDGQKQFVCSTCQYRSVHSLADVRKHILGCHCSVSTSYTRLCLRASRLDTNTFSLFSDRKLISFANEKLKRAESGT-GWDANGDTSAMQLLDDSEPEQESPIDTISRPIKRVAISSGAVGS---IKRAKLTQRQSHSAKMRPDSPVPEVGQPLERNEKIDRVIHLNYSWHVLERLVAGQCPERYLPILQQKMDV---YALHRILLTRRNGK------RYFLCSHCPNCSPHG--MNDIRKHILGVHARLPERFKAAAMYCSRMNRDN-YGLLSDDELLK 521

HSP 3 Score: 65.855 bits (159), Expect = 2.070e-10
Identity = 35/112 (31.25%), Postives = 59/112 (52.68%), Query Frame = 3 
Query: 1485 VPLPYSIVALRQLTKF-LPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSR 1817
            + L YS   L +L     P+     L +KM  Y+   I++   +  R FLC+ C   SP+ + D+RKHI+G H  +  +     +  SR++ + + LLSDD++L   +D+ R
Sbjct:  417 IHLNYSWHVLERLVAGQCPERYLPILQQKMDVYALHRILLTRRNGKRYFLCSHCPNCSPHGMNDIRKHILGVHARLPERFKAAAMYCSRMNRDNYGLLSDDELLKKNQDMVR 528

HSP 4 Score: 59.3066 bits (142), Expect = 1.813e-8
Identity = 47/182 (25.82%), Postives = 79/182 (43.41%), Query Frame = 3 
Query:   72 VTRIEESKGCFICVDCPNNFSFWNWEDF---------ESHSCVCEKKPYFECIYCGLLVLNKNGERHINMHFQHQCYNLYNCSLCTFSTNVEMQ-YLKHIKL-HNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHPTKSHNFEITQFLTCSE 584
            ++ +E+    F+C  C +N S  N + F         E H C       FEC+YC   + + N  +HI  HF       Y C  C     + +   + H++L H DL     + C  C+  F      L+H K + + +F+C  +NC  KS +   +  H ++ H   S   ++   +TC+E
Sbjct:    7 ISILEKVNQMFVCSICCDNKSGSNPKPFATSNPSLFLEHHRCCHPSINEFECVYCCSHLPSVNLMQHIQNHFTDSASPRYVCPHCCSRIKININSTIDHMELDHPDL----PFDCPHCRNQFSDRTDLLTHFKKHFLCIFHCSFENCFVKSHNMIGVLAHMKRMH-NGSRCMKVECLITCTE 183

HSP 5 Score: 58.9214 bits (141), Expect = 2.592e-8
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 3 
Query: 2790 RIIHLPYSLEALKCLTDGYCEPSFFPVLQEKMNIYSKYKIFIVRREGRRIFXXXXXXXXXXHGMGDVKKHILGVHARIPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWK 3131
            ++I LPYS   L  L+ G+ E      L  KM  YSK+K+ +   +G++ F CS C   S H + DV+KHILG H  +   +    +  SRL     SL  D  L+  A  K K
Sbjct:  216 QMIALPYSTRVLSKLSSGFDE-RLREDLTCKMAQYSKFKVRLEIVDGQKQFVCSTCQYRSVHSLADVRKHILGCHCSVSTSYTRLCLRASRLDTNTFSLFSDRKLISFANEKLK 328
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BLAST of Zinc finger, C2H2 type vs. Planmine SMEST
Match: SMESG000081020.1 (SMESG000081020.1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.728e-12
Identity = 130/614 (21.17%), Postives = 231/614 (37.62%), Query Frame = 3 
Query:   60 FLQNVTRIEESKGCFICVDCPNNFSFWNWEDFESHSCVCEKKPYFE---CIYCGLLVLNKNGERHINMHFQHQCYNLYNCSLCTFSTNVEMQ--YLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCVKNCIAKSRSKQQMCEHYRKCHPTKSHNFEITQFLTCS---ENSPDVSLNSKLIEKFPDLGSILSIGSFK---PYTNNKKSTVLF-LDCYKCDFSSIQWN-------SYVRHCFKCTAADDNI--HRDASVYLCSYC------STLSTRKHLIDEHICECDRSAKVIRETFPFRVVDEKPEPIVAKDDIIRPSKRCRSVNSCTNELPATKRPRIS-----ESPDSKCKTEEAVVSDCEELEVNTEFVSIPFDEDGFRTNNPNIPYQQKEAIISKMRQFNQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIKECLKFTRLPKSNDKFQELQE-------------------------QIIMRNLRPKSIDKDKIKVPLPYSIVAL------RQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGIS 1712
            FL  +   E S G FIC  C   F+    E +E H  + E    ++   CIYC +         HI  HF+    +   C+LC  +  ++ Q   L H+   ++ N+ +   C  CQ+++D +   L HI   L ++++C  + C  K+   +++  H           FE   F   S   EN      +  ++ K     S +SI       P  N  +   ++ L C K  F+S+  N       ++ +  F        I    +  +Y C  C      S    +KH++  H   C  + K  R +  F   +++     +  +++   K    +N   N  P T+    S     + P  K K      + C + + N+  + I + +D F     +       A   K+    Q  I ++   N  +   C  C+ +  Y  GD ++H L+ H  I  +  + C++  ++    +   + +E                         + I  N    S++  K+K  L Y +          ++ K       + L  K+   +  SI +      + F C  C Y S Y+  DVRKHI+  HCGI+
Sbjct:   10 FLNKIAVQEASLGKFICPKCSTFFTNSKTE-YEDH--LRENHIDYDQVSCIYCAVSFDFSKISSHIESHFEENLMSTNICNLCNTAVKMDSQESILDHLLFQHN-NAII---CPLCQIEYDDINHLLDHINENLKIVYHCTFEGCQMKTNDNEELNFHKNVSGHISDSCFEEHTFNCLSIDDENKFSFVEDENILPKLDKENSFISINHDNDEIPDRNVSRINFVWQLHCRKDLFNSLYKNDDLEELSNFQKKLFSIDLYSIGIILESEKKLYCCLECDYAPQYSHWDVKKHILVSH---CSMTEKESRTSLRFIEFNKQ-----SSKNLLNRRKSTSRIND--NNYPVTRSESASFLLKLKLPSVKRKKSLLNQTPCSKSKFNS-ILKIRYRKDLFGQFFRDANSSSAVAFKRKISSVEQYSIGVMVTNN-KKAFYCLSCNYISYYSHGDVRKHILNFHCSISNKDARRCMRLVQVVDLQNGLVDNEETKESELIEDEDEEDEEEDVDEGEEPKEIESNNISNSVEVKKVKSKLSYMLKLFVRTDLYDEMFKNCSLEIAETLKHKLIPVNDYSIGVAVNKTKKTFYCQLCDYISNYSNWDVRKHILVWHCGIN 604

HSP 2 Score: 65.855 bits (159), Expect = 2.322e-10
Identity = 82/332 (24.70%), Postives = 144/332 (43.37%), Query Frame = 3 
Query: 1518 QLTKFLPQSTQQYLSE---KMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRLDP-----NEFTLLSD-----DKILN--LAEDLSRRTKHKSFGVSSHNRRSQRHALAKKKRAYSVPNSKEPPVNKSPVKSEIVTQTPPVSNHSLGGRKGVNALYLNADSNHSLTLPFXXXXXX-XXXXXXIPEDQIPGLIQKMKL-YSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAA-------------------TLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLA 2405
            +L K  P ++ ++L E   KM  Y   S+ +      + ++C  C Y S Y   D++KHIM  HCGIS    R C++  + D      ++  L S+      KI N  L   +SR +   S     H    Q   L KK+ +Y V    EP VN    +    ++   V +      K +++         SL++PF+E   +  L    + E Q   + +++ L YSE  L++LC +++ +  Q P  +    A     K+R A                   +++   +H++ +H  I QS I +   ++++  ++D Q+ SD  L +L 
Sbjct:  692 ELKKVFPIASDEFLKEIESKMENYKAYSLEVTYIKGVKYYVCVVCGYKSHYNQGDIKKHIMSKHCGISGNIVRDCIKLCKKDSLSQSFDDIKLESEMYASPRKIRNRSLILKISRESCPGSVKTDQHLACKQ---LPKKRSSYFVSQKVEPIVNSDHDRYNDFSENVVVVDEDQQQMKRLSS---------SLSIPFAELEKRPKLASINLDEPQKIIIEREIGLRYSENILRKLCTAEKILG-QFPLMKEKLKAYCQS-KIRVAKKFNSEIFICSHCNWFNWKSMSVVSKHILEMHTGIDQSFILLVEASTKL--DSDGQLLSDSELSKLG 1007
[Close]
BLAST of Zinc finger, C2H2 type vs. Planmine SMEST
Match: SMESG000016820.1 (SMESG000016820.1)

HSP 1 Score: 65.855 bits (159), Expect = 2.348e-10
Identity = 80/372 (21.51%), Postives = 146/372 (39.25%), Query Frame = 3 
Query: 1485 VPLPYSIVALRQLTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALADVRKHIMGSHCGISTKHFRFCLQASRL--------------------DPNEFTLLSDDKILNLAEDLSRRTKHKSFGVSSHNRR---SQRHALAKKKRAYSVPNSKEPPVNKSPVKSEIVTQTPPVSNH-SLGGRKGVNALYLNADSNHSLTLPFXXXXXXXXXXXXIPEDQIPGLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLADARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQGKIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGD 2528
            + L YS    R+L + LP+     L+ KM+ ++  ++  +       F+C +C+Y + ++L   RKHI   HC I   +    +QAS L                          LLSD +     E+ S+ +K   +G  +  R+   S   +   K     +    EP V   P+ S   ++   V+ H         +   L+  +   L L +    +   L + + E+    +  KMK+Y E +L   C  D+       C   + T   PD           R+H+  +H  IP   +T C QA+  C +++F +    M+  +  +R+   + S      ++DS ++          T +V+L +
Sbjct:  413 IQLKYSERVFRKLLRNLPEKDFSNLNNKMKIFAKFTLTTKWVGEKMLFMCPKCSYKTTHSLDHTRKHIFRIHCKIPKIYLINSMQASSLLSEKKMIRHINFYKQKMGKKSGAHVELLSDSE----DEENSKISKSIVYGTPAKLRKIDLSNGISGISKNSIADIGTDVEPKVVLKPIDSCTPSKPSIVNQHVETNSLPSCSESELDTSNASVLQLTY-SERVFRKLLRKLSEEDFSEIHNKMKIYKECTLSTACVGDKKFYICNQCK--YKTNHSPD---------RIRKHIFRMHCGIPSIYLTACMQAN--CMQSNFFLSEKKMIHNINFQRKKIAKKSGINLELLSDSENEKDCGVLKPKNTRAVNLDE 766
The following BLAST results are available for this feature:
BLAST of Zinc finger, C2H2 type vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2L4150.000e+040.40Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A4S2KY561.263e-1440.40C2H2-type domain-containing protein OS=Opisthorchi... [more]
A0A4S2KZE51.440e-1440.40C2H2-type domain-containing protein OS=Opisthorchi... [more]
A0A5J4NZT10.000e+040.49C2H2-type domain-containing protein (Fragment) OS=... [more]
G7YG135.756e-1541.10C2H2-type domain-containing protein OS=Clonorchis ... [more]
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BLAST of Zinc finger, C2H2 type vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Zinc finger, C2H2 type vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000033448.10.000e+099.76SMESG000033448.1[more]
SMESG000075452.13.070e-3531.19SMESG000075452.1[more]
SMESG000081020.11.728e-1221.17SMESG000081020.1[more]
SMESG000016820.12.348e-1021.51SMESG000016820.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30010950 ID=SMED30010950|Name=Zinc finger, C2H2 type|organism=Schmidtea mediterranea sexual|type=transcript|length=4049bp
ATATAAATCTTATATGAAATATGATAAATTCTATTAACCAACCAGAATTC
TATAAATATTTTCTTCAAAATGTAACACGAATAGAAGAGTCAAAAGGTTG
TTTTATATGTGTAGATTGTCCTAATAATTTCTCATTCTGGAATTGGGAAG
ATTTCGAATCTCATTCATGTGTTTGTGAGAAAAAACCATATTTTGAATGT
ATATATTGTGGTTTGTTGGTATTAAATAAAAATGGTGAACGACACATTAA
CATGCATTTCCAACATCAATGTTATAATTTATACAATTGTTCGTTATGTA
CTTTCTCAACTAATGTCGAAATGCAATATCTCAAACATATAAAACTTCAC
AATGACTTGAACTCAACATTGAAATACAAATGCAATTCTTGTCAGTTAGA
TTTCGACACTGTTGTTGCGTTTCTTTCTCACATCAAATTCTATTTGATGG
TCATGTTTAATTGTTGTGTTAAAAATTGCATAGCAAAATCAAGATCAAAG
CAGCAAATGTGTGAGCATTATCGAAAATGCCATCCGACGAAATCGCACAA
TTTTGAAATTACCCAATTTTTGACTTGTTCAGAAAACTCTCCGGATGTGT
CATTGAACAGTAAATTGATAGAGAAATTCCCTGATCTCGGATCAATTTTA
TCGATCGGTTCATTCAAACCATACACCAACAACAAGAAATCCACAGTCCT
GTTTCTTGATTGTTACAAATGTGACTTCAGTTCGATTCAATGGAACAGCT
ATGTGCGACACTGTTTCAAATGCACCGCCGCAGATGACAATATTCATAGG
GACGCTTCGGTATATCTGTGTTCGTACTGTTCAACGTTGTCGACGAGAAA
ACATTTGATTGACGAACACATTTGTGAATGCGATAGAAGTGCAAAAGTTA
TACGGGAAACTTTTCCGTTTCGTGTAGTTGATGAAAAACCAGAGCCAATC
GTTGCTAAGGATGATATAATCCGACCTTCAAAGCGCTGTAGAAGTGTAAA
TAGTTGCACAAATGAGTTGCCAGCTACAAAAAGACCGAGAATCAGTGAAA
GTCCCGATAGTAAATGTAAAACCGAGGAAGCCGTTGTTTCTGATTGTGAG
GAATTGGAGGTCAATACCGAGTTCGTTTCAATTCCTTTTGACGAAGATGG
ATTCCGCACCAATAATCCAAATATTCCTTACCAACAAAAAGAAGCTATAA
TTTCAAAAATGCGACAATTTAATCAAAATCAAATAAGCATTGTCGGTAAA
GAAAATTATGGTCGAATACCAGAATGTCCCGAATGTCACAAGGTGTTTTC
ATATGGATTTGGAGATTTCAAGCGACACTTTTTGTCCGTTCATTTGGACA
TCGAAAAAGAATTCATAAAGGAATGCCTAAAATTTACCCGATTGCCTAAA
AGTAATGACAAGTTTCAAGAACTTCAAGAGCAAATAATCATGAGAAATCT
TCGTCCGAAATCAATTGATAAAGATAAAATCAAAGTGCCTCTTCCATATT
CCATAGTTGCTTTGCGACAATTGACGAAATTTCTTCCGCAATCCACTCAA
CAATATTTGTCAGAAAAAATGAGAGCCTATTCAACTATGTCGATTATAAT
TCAGAACTATGATAACAGTCGAAGGTTTTTGTGTAACCAATGTACATATT
CTTCTCCTTATGCTCTGGCAGATGTCAGGAAGCATATCATGGGTTCTCAT
TGTGGAATTTCGACAAAGCATTTTCGATTCTGTTTACAAGCATCAAGACT
TGATCCGAATGAATTCACACTTTTATCTGATGATAAAATCCTTAATTTAG
CTGAAGATCTTAGTCGAAGAACAAAACACAAAAGTTTTGGCGTTTCATCT
CATAACCGACGCTCTCAGAGGCATGCATTAGCGAAAAAGAAAAGAGCTTA
TAGTGTACCGAATTCAAAAGAACCTCCGGTAAATAAGTCTCCAGTAAAAT
CTGAAATTGTCACCCAAACACCACCGGTGAGCAATCATTCTCTCGGTGGT
AGAAAAGGCGTCAACGCTCTTTATTTGAACGCCGATTCAAATCACTCTTT
AACGCTACCGTTTTCTGAGTCGGTTTTACAGTCATTGCTACAGCAGTTGA
TTCCCGAAGACCAAATTCCGGGTTTAATTCAAAAAATGAAGCTTTATTCT
GAATACAGTTTGAAAAGACTTTGTAAAAGTGATAGAACTGTTGCATTTCA
GTGCCCTTGTGGTCGAGTATTTCACACTGCTCGGATTCCCGATCTCAAAA
TGCGTGCAGCTACTCTGGCAGATGCTCGCCGACATGTAATGGGAGTCCAT
GCAAAAATTCCTCAATCACTAATTACAGTTTGTTGTCAAGCTTCTCGAAT
ATGTCGAGAAAATGATTTTCAAATCTATTCCGACGATATGCTTCTTCAAT
TGGCGTCGGAAAGACAAGGGAAAATACAAGACTCCCAATCTCGGTCTAAT
CAAGTCGCTGATTCTAGTTCCAAATCTCAAGATTTGCAAGCAGATCAAAC
TGGAACAAGTTCAGTGGATTTGGGAGACGAAAATTCCGCAATCAACGATC
AAGATCTTTCATCTCCGATGCCTTCGATTTGTGAGAATTCAGTGTCTGAA
AATTGCGTTTCGAAAACTAATTGCTTTTTAACTGCAAATTTTTCCGAAGA
AGATCTAATTTCAACGAATAAAGAAGAAACACCCTCCTTTAATTTTGTCA
GCGACCTTGCTGTCGAGCAGCAAAAGTATTCAGCGATCGCCGAAGAAAGT
GCAGTTTCCAGGCTAGCGAGCGAAAGCAGTAAAATTGAACGAATCATTCA
TTTGCCTTATTCATTAGAAGCTTTGAAATGTCTGACCGACGGTTATTGTG
AGCCGAGTTTTTTTCCCGTTCTTCAGGAAAAAATGAATATATATTCAAAA
TATAAAATATTTATTGTTCGTCGAGAAGGAAGGCGAATTTTTTGTTGTTC
TGGTTGTCCGTCATCTTCTCCACATGGTATGGGAGATGTTAAGAAACACA
TTCTTGGTGTTCACGCGAGAATTCCAGAACGATTCAAAGCCGCCGCTATG
CACTGTTCGCGGTTGAGCAGAGAAGATACATCTCTTTTGCCAGATCATTT
ATTATTGCAGTTGGCGAAAATGAAATGGAAAGGCAGCGTAATAAAGCCGC
TAGCGGAACTTTCTGTTGAAGACCGTTTAAAAACCTTTTCAAAGAAAAAC
TGGGAAGGAAAGCAGCGCAACTCAAGGACATCGAATTATTATTCAATGGT
CGAACAGTCGATGTTTGCTCTCAACAATCTAAATAAATCGTCGGAAAAAT
CATCGGATTCATTGAAAAACATCCCAACGACAATCAAGCCGGAAAATATC
AGTTGCGATGACACAAACGATGACAATTTCCTAGCTAATCCGGTCAGTGA
AATTATTGTGCCCGATGAATTCTTTGTTGAAATTCGTCAGAAACAGTCTG
AAGTGGCATACAAATGTTCGATGTGCGAGTATGAGTCGCGATTCGTTGGC
AACAGTAAAGGGCACATTGTGCGCGAACATTTGGGAATTCCGGCCCACAC
ATGCAGCATTTGTGAACAGTTGTTCAATTCTCGCGCAAGTGTGCTGGCAC
ATCACGAGAAAGACCATCAAAACACAACATTCACCTTGGCACATTACGGT
CCGTATAAAATCGCTATGTCGAGAATAATTGTCAAAGAGTTGCCCATATC
GCTGGCGATTTCAAGTTTGTCTGTGGAAAATGCAAAAAGTCTCACAATAA
AATGCAACAGTTTTCTTCAATCCAACCAAGAGCTGACCGATTTCGATATG
TATCTCATATGATTCATGTGAATAATCTTGTTGTCATTATATTTGTTGTT
GTTGTTGTTGCCGTCGTCGTCGTCATCGTCATCCTTGAGAACATGAGTCT
TGAATTTTGTATAGAAACTAAAGCAAAACAATTTGTATTCTAACGTATTC
TATTTGTAGTTATTTATCTAAATCCAGGAATTAAGTTTGGAAAAAAAATT
AATTTTTTTTTCATTCAATGTATTTATGCAAATAATATCGATGTAGTTG
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protein sequence of SMED30010950-orf-1

>SMED30010950-orf-1 ID=SMED30010950-orf-1|Name=SMED30010950-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1264bp
MINSINQPEFYKYFLQNVTRIEESKGCFICVDCPNNFSFWNWEDFESHSC
VCEKKPYFECIYCGLLVLNKNGERHINMHFQHQCYNLYNCSLCTFSTNVE
MQYLKHIKLHNDLNSTLKYKCNSCQLDFDTVVAFLSHIKFYLMVMFNCCV
KNCIAKSRSKQQMCEHYRKCHPTKSHNFEITQFLTCSENSPDVSLNSKLI
EKFPDLGSILSIGSFKPYTNNKKSTVLFLDCYKCDFSSIQWNSYVRHCFK
CTAADDNIHRDASVYLCSYCSTLSTRKHLIDEHICECDRSAKVIRETFPF
RVVDEKPEPIVAKDDIIRPSKRCRSVNSCTNELPATKRPRISESPDSKCK
TEEAVVSDCEELEVNTEFVSIPFDEDGFRTNNPNIPYQQKEAIISKMRQF
NQNQISIVGKENYGRIPECPECHKVFSYGFGDFKRHFLSVHLDIEKEFIK
ECLKFTRLPKSNDKFQELQEQIIMRNLRPKSIDKDKIKVPLPYSIVALRQ
LTKFLPQSTQQYLSEKMRAYSTMSIIIQNYDNSRRFLCNQCTYSSPYALA
DVRKHIMGSHCGISTKHFRFCLQASRLDPNEFTLLSDDKILNLAEDLSRR
TKHKSFGVSSHNRRSQRHALAKKKRAYSVPNSKEPPVNKSPVKSEIVTQT
PPVSNHSLGGRKGVNALYLNADSNHSLTLPFSESVLQSLLQQLIPEDQIP
GLIQKMKLYSEYSLKRLCKSDRTVAFQCPCGRVFHTARIPDLKMRAATLA
DARRHVMGVHAKIPQSLITVCCQASRICRENDFQIYSDDMLLQLASERQG
KIQDSQSRSNQVADSSSKSQDLQADQTGTSSVDLGDENSAINDQDLSSPM
PSICENSVSENCVSKTNCFLTANFSEEDLISTNKEETPSFNFVSDLAVEQ
QKYSAIAEESAVSRLASESSKIERIIHLPYSLEALKCLTDGYCEPSFFPV
LQEKMNIYSKYKIFIVRREGRRIFCCSGCPSSSPHGMGDVKKHILGVHAR
IPERFKAAAMHCSRLSREDTSLLPDHLLLQLAKMKWKGSVIKPLAELSVE
DRLKTFSKKNWEGKQRNSRTSNYYSMVEQSMFALNNLNKSSEKSSDSLKN
IPTTIKPENISCDDTNDDNFLANPVSEIIVPDEFFVEIRQKQSEVAYKCS
MCEYESRFVGNSKGHIVREHLGIPAHTCSICEQLFNSRASVLAHHEKDHQ
NTTFTLAHYGPYKIAMSRIIVKELPISLAISSLSVENAKSLTIKCNSFLQ
SNQELTDFDMYLI*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR015880Znf_C2H2-like
IPR007087Znf_C2H2
Vocabulary: molecular function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding