SMED30010944
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010944 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of SMED30010944 vs. Ensembl Zebrafish
Match: CABZ01033394.1 (pep chromosome:GRCz11:13:6032844:6038477:-1 gene:ENSDARG00000101795.2 transcript:ENSDART00000166130.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CABZ01033394.1) HSP 1 Score: 109.383 bits (272), Expect = 1.918e-23 Identity = 110/452 (24.34%), Postives = 201/452 (44.47%), Query Frame = -3 Query: 597 ELDQITAKEVIFEYKQANASSPGDDNITYRDLRLL-DPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGL--EFRPEKCAYLSTSNSTD-INGXXXXXXXXX---XXKDKEFYHYLGVPVGECP-NQTPYDTLYPWQKVDMYK-TFLHSRLHFAFRTREIKISAI------GRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLT 1907 EL+ +TA + + +PG D + ++ D G+ + N + G +P LS + ++ K GD + +WRP++LL + +KI + L+ RL I ++HP Q +++ +++ +L+ S Y L + +D + AF V H Y+WN L G F+ ++++LY S ++ I RG+RQGC +S +L++LAI P+L + S I + + + VQ A A D+ +N ++ + + + EF A ++ S ING N + + K YLGV +GE Q +D + + + K ++H +L +FR R + I+ + R + + L ++ F++ H P++ +Y P+E GG + L ++ + RLLT Sbjct: 480 ELELLTALKAM-----QPGKAPGIDGLPIEFYKIFWDVLGEDFLAVLNESLTEGSLP---LSCRRAVVTLLPKKGDLQEIKNWRPVSLLCSDFKILSKTLANRLKNVI--GHIIHPDQTYCVPGRSIMDNISLVRDILDLSSYFN-LDLGLISIDQEKAFDRVEHQYLWNTLEAFGFGSGFIGMIKVLYQDIESVLKINGGLSAPFKINRGIRQGCALSGMLYSLAIEPMLRKLRSR-IEGFMLANKSVQHQLSAY--------ADDVIVFVNGQKDVNTLVSIISEFDKLSAARVNWGKSDALINGKWNNGTPILPGGLIWKKGGLKYLGVYLGESTMQQKNWDGIIEKIEGKLKKWRWIHPQL--SFRGRVLIINNLIASTLWHRLFCTEPPSGLLLFLQAKLVNFFWDRMHWVPQSELYLPLEEGGQGLVSLVSRHATFRLQFVQRLLT 909
BLAST of SMED30010944 vs. Ensembl Zebrafish
Match: CU462878.3 (pep chromosome:GRCz11:17:8542203:8545189:1 gene:ENSDARG00000103562.2 transcript:ENSDART00000158873.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CU462878.3) HSP 1 Score: 107.457 bits (267), Expect = 5.441e-23 Identity = 71/238 (29.83%), Postives = 122/238 (51.26%), Query Frame = -3 Query: 1197 LDQITAKEVIFEYKQANAS-SPGDDNITYRDLRLLDPE-GKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSP 1904 L +IT +E+ + A+ +PG D + P+ +L + FN ++ G+IP W +IPK GK D ++ SS+RPI++L+ YK+F SILS+RL ++ ++L+ Q G + ++ ++ H + + ++ LD + AF SV Y++ +LA G + F+ ++ LY + ++ I ++RG RQGCP+S LF L I P+ AI P Sbjct: 264 LTEITIEELDSAISKLKANKTPGTDGYPSEMYKTFKPQITPMLLKCFNYVLRGGEIPQSWQEAVISIIPKQGK--DKNECSSYRPISVLNVDYKLFASILSKRLE--VVISELVDLDQTGFIQNRQTQDNLRRTLQIMSHITTENISAMLLS-LDAEKAFDSVGWDYLYQVLARFGFNNKFIECIKGLYLSPKAKIKINGHLSKTIYLERGTRQGCPLSPTLFALFIEPLAQAIREEP 496
BLAST of SMED30010944 vs. Ensembl Zebrafish
Match: BX649434.3 (pep chromosome:GRCz11:3:18270043:18274691:-1 gene:ENSDARG00000105157.2 transcript:ENSDART00000161140.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX649434.3) HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19 Identity = 65/220 (29.55%), Postives = 112/220 (50.91%), Query Frame = -3 Query: 1200 NASSPGDDNITYRDLRLLDPE-GKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSS 1856 N SPG D I ++L P G+ L + N ++ G +P LS + +I K GD +WRP++LL + YKI + L+ RL+K + ++++ P Q ++ ++ LE +K I+ LD + AF V H Y+ +L G HF+ ++ ++Y+ S ++ D++RGVRQGC +S +L+++AI P+L I + Sbjct: 496 NGKSPGIDGIPVDFYKVLWPVIGEDLFLVLNDSLNKGSLP---LSCRRAVITLLPKKGDLQKIGNWRPVSLLCSDYKILSRALAVRLSK--VLDQIIQPNQNYSIPNRSIFDNIFLIRDALEVAKLFGINCGLIS-LDQEKAFDRVEHEYLKKVLKVFGFSTHFIKMIEVMYSNIQSVLKINGGLSAPFDVQRGVRQGCAMSGMLYSIAIEPLLHRIRAE 709
BLAST of SMED30010944 vs. Ensembl Zebrafish
Match: BX323564.1 (pep chromosome:GRCz11:2:10597810:10600950:-1 gene:ENSDARG00000098557.2 transcript:ENSDART00000160216.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX323564.1) HSP 1 Score: 92.8189 bits (229), Expect = 1.505e-18 Identity = 103/413 (24.94%), Postives = 175/413 (42.37%), Query Frame = -3 Query: 642 SPGDDNITYR-DLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPV-LVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALIN--NSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDTLYPWQK--VDMYKTFLHSRLHFAFRTREIKISAIGR---PSAKDSHNKNLSTQLRSIIYSFF--NLPHNAPKAYIYSPIETGGAAFIDLHD 1847 SPG D ++ L + L ++ I+ ++P L+PKP K D +WRPI LL+ YK+ + I ++RL + + N+++ Q G + ++ +L++S + L + +LD AF ++ H +++ L Y G + F+S++ L + NS P + + I RGVRQGCPI+ LF L + + + + SS I + + E++I ADD L L A + N IAS GL KC +S NS L + K+ YLG+ + + ++ P K ++ +L L R K+ + R P+ + ++ + F N H+ K I P + GG +D D Sbjct: 187 SPGSDGLSVEFYLHFWNIIENPLFEMYKESIELKELPTSLKQGLITLLPKPNK--DLMILDNWRPITLLNVDYKLLSLIYAKRLKEGL--NEIISEYQTGFMAGRHISWNIRLILDLLDYSNLIESEALLL-FLDFHKAFDTIEHQFMFMALKYFGFGDRFISIMELFHRDINSSINLYPNTSKRFPICRGVRQGCPIAPFLFLLVVEFLSIYVLKSSAIQGITIFNKEIRISQLADDTVLFLKDKDQLPAALQLVNDFSIAS--GLTLNVTKCEIISLYNSE--------VKSLFNIPVKKTVKYLGISITKNLSERQDLNFSPKIKKAQGIFNNWLQRDLSIIGRVLLTKVEGVSRFVYPALSLFVQDAICKKINDLFIQFVWRNRHHHLRKEVIQGPRKDGGFELLDFFD 584
BLAST of SMED30010944 vs. Ensembl Zebrafish
Match: CU638714.1 (pep chromosome:GRCz11:24:19863246:19868789:1 gene:ENSDARG00000100303.2 transcript:ENSDART00000165242.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CU638714.1) HSP 1 Score: 92.8189 bits (229), Expect = 1.977e-18 Identity = 74/250 (29.60%), Postives = 123/250 (49.20%), Query Frame = -3 Query: 1209 KSKEIIELDQITAKEVIFEYKQ-ANASSPGDDNITYRDLRLLDPE-GKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLT---KWIIENKLLHPGQKGGSRFEGCVEHNAV------LTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAI 1925 + K++++ D IT KE+ +Q +N SPG D + R E G L +F +P LS + ++ K GD +WRP++LL YKI + L+ R+ +++IEN + CV ++ L V++ S + K L + LD + AF V H Y++N+L G E F+S ++LLY+ G ++ ++ I RG+RQGCP+S L++L I P+L+ + Sbjct: 468 EQKKLLDRD-ITFKELTEAMQQLSNGRSPGIDGLPVEFYRQFWNEIGMDLYEVFLSCFKEKLLP---LSCRRAVLSLLPKKGDLCLLKNWRPVSLLCLDYKILSKCLANRIMHCLQFLIENDQTY-----------CVPDRSIIDNIFMLRDVVDFSHLTSK-DLGVLSLDQEKAFDRVDHGYLFNVLKNFGFGEEFLSYIKLLYSNVFIMVKAGGALSAQVPIGRGIRQGCPLSGQLYSLMIEPLLLKL 701
BLAST of SMED30010944 vs. Ensembl Xenopus
Match: ENSXETT00000032317.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:1:130520927:130524992:-1 gene:ENSXETG00000008594.1 transcript:ENSXETT00000032317.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 117.087 bits (292), Expect = 9.723e-26 Identity = 80/241 (33.20%), Postives = 121/241 (50.21%), Query Frame = -3 Query: 1197 ELDQITAKEVIFEYKQANASSPGDDN----ITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSP 1907 EL + +E + + A+ G D I R +LL P +L +LF + GQ P +L+PK GK D S+RPI+LL+ KIF +L+RRL++ I K++HP Q G + + L L H+ + A AIA LDI AF +V Y+W +L + G + ++ +++LLY + L TP + RG RQGCP+S +LF +AI P A+ + P Sbjct: 448 ELTAVEIQEAVNAFPLGKAA--GADGLPIEIYKRHSKLLTP---MLLKLFKEAVQLGQFPESLYEAAIVLLPKQGK--DPHLCESFRPISLLTADVKIFAKVLARRLSRVI--TKIIHPDQIGFIPAKTAALNTRRLYLNLAHASAGQGAK-AIAALDITKAFDTVEWPYLWQVLTHFGFGKKYIQMVQLLYKYPVASIRINSLTTPAFALSRGTRQGCPLSPLLFAIAIEPFAQAVRAHP 678
BLAST of SMED30010944 vs. Ensembl Xenopus
Match: ENSXETT00000040456.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:8:87387561:87390644:-1 gene:ENSXETG00000021299.1 transcript:ENSXETT00000040456.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 116.701 bits (291), Expect = 1.018e-25 Identity = 79/241 (32.78%), Postives = 121/241 (50.21%), Query Frame = -3 Query: 1197 ELDQITAKEVIFEYKQANASSPGDDN----ITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSP 1907 EL + +E + + A+ G D I R +LL P +L +LF + GQ P +L+PK GK D S+RPI+LL+ KIF +L+RRL++ + K++HP Q G + + L L H+ + A AIA LDI AF +V Y+W +L + G + ++ +++LLY + L TP + RG RQGCP+S +LF +AI P A+ + P Sbjct: 78 ELTAVEIQEAVNAFPLGKAA--GADGLPIEIYKRHSKLLTP---MLLKLFKEAVQLGQFPESLYEAAIVLLPKQGK--DPHLCESFRPISLLTADVKIFAKVLARRLSR--VITKIIHPDQIGFIPAKTAALNTRRLYLNLAHASAGQGAK-AIAALDITKAFDTVEWPYLWQVLTHFGFGKKYIQMVQLLYKYPVASIRINSLTTPAFALSRGTRQGCPLSPLLFAIAIEPFAQAVRAHP 308
BLAST of SMED30010944 vs. Ensembl Xenopus
Match: ENSXETT00000002428.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:15907829:15913358:1 gene:ENSXETG00000006437.1 transcript:ENSXETT00000002428.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 109.383 bits (272), Expect = 2.683e-23 Identity = 82/250 (32.80%), Postives = 122/250 (48.80%), Query Frame = -3 Query: 1194 KEIIE--LDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGK----LLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKG--GSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPI 1919 +E +E + I +E I + Q A+ G D I + L K LL +++ I +G +P IL+PKPGK D S+RPI+LL+T KI+ IL+RRL + I L++P Q G ++ L L S +A IA LDI AF +V +Y+W +L +G F+++++LLY + L T + RG RQGCP+S +LF LAI P A+ P+ Sbjct: 442 REFLEAKITDIETQEAIDSFPQGKAA--GSDGI---PIELYKKHAKSQTPLLTKMYGEAISTGILPESMYEAAIILLPKPGK--DPQLCESFRPISLLTTDVKIYAKILARRLARVI--KTLVNPDQIGFIPTKTTALNTRRLYLNLSLTPSNTGNRA---IAALDIAKAFDTVEWSYLWCVLKQLGFGPTFINMVQLLYKSPRATLRINSLCTSNFTLSRGTRQGCPLSPLLFALAIEPFAQAVRKHPL 679
BLAST of SMED30010944 vs. Ensembl Xenopus
Match: ENSXETT00000045854.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:1:73083463:73084749:1 gene:ENSXETG00000020482.1 transcript:ENSXETT00000045854.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 101.293 bits (251), Expect = 6.959e-22 Identity = 80/261 (30.65%), Postives = 125/261 (47.89%), Query Frame = -3 Query: 1197 EFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANAS--SPGDDNIT---YRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKG--GSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSP 1958 +++ SI I + LD K+ + E + S +PG D + Y+ L P KLL L D+ +P + ++IPKPGK D SS+RPI+L++T KI IL+ RL + + + L+HP Q G R + H + + +A LD AF S+ Y+W +L+ G + F+ ++LLY + + +P ++RG RQGCP+S ILF LAI P+ + I +SP Sbjct: 132 QYLASIPIPQIAPPDKAYLDAPITKQEVAEAIATHPSNKTPGPDGLPSNWYKVLAEYIP-SKLLETL-QYAYDNQALPASFAEALIVVIPKPGK--DPSLCSSYRPISLINTDAKILAKILATRLQRVVPD--LVHPDQSGFMPGRSTDINLRRLFTNLQIPHLETDTRV---VASLDSAKAFDSIEWGYLWEVLSGFGFGQTFLKWIKLLYQHPTARVRVNGITSPPFSLERGTRQGCPLSPILFALAIEPLAILIRNSP 383
BLAST of SMED30010944 vs. Ensembl Xenopus
Match: efcab14 (EF-hand calcium binding domain 14 [Source:Xenbase;Acc:XB-GENE-5791088]) HSP 1 Score: 99.3673 bits (246), Expect = 4.198e-21 Identity = 72/222 (32.43%), Postives = 110/222 (49.55%), Query Frame = -3 Query: 1197 SPGDDNIT---YRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKG--GSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSP 1847 +PG D + Y+ L P KLL L D+ +P + ++IPKPGK D SS+RPI+L++T KI IL+ RL + + + L+HP Q G R + H + + +A LD AF S+ Y+W +L+ G + F+ ++LLY + + +P ++RG RQGCP+S ILF LAI P+ + I +SP Sbjct: 121 TPGPDGLPSNWYKVLAEYIP-SKLLETL-QYAYDNQALPASFAEALIVVIPKPGK--DPSLCSSYRPISLINTDAKILAKILATRLQRVVPD--LVHPDQSGFMPGRSTDINLRRLFTNLQIPHLETDTRV---VASLDSAKAFDSIEWGYLWEVLSGFGFGQTFLKWIKLLYQHPTARVRVNGITSPPFSLERGTRQGCPLSPILFALAIEPLAILIRNSP 333
BLAST of SMED30010944 vs. UniProt/SwissProt
Match: sp|Q03274|PO22_POPJA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.208e-22 Identity = 70/245 (28.57%), Postives = 126/245 (51.43%), Query Frame = -3 Query: 1164 ITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGP-LITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEV 1895 I +E+ K S+PG D +T + + +L + + G +P W + +T LIPK GD ++ S+WRPI + S ++ IL++RL + LHP QKG +R +G + ++ +L + + +K ++ LD++ AF +V H+ I L +G+DE + + + + + GP T KI I+RGV+QG P+S LFN ++ +L ++ S+P +G+ ++ Sbjct: 6 IAREEIQCAIKGWKPSAPGSDGLTVQAI----TRTRLPRNFVQLHLLRGHVPTPWTAMRTTLIPK---DGDLENPSNWRPITIASALQRLLHRILAKRLEAAV----ELHPAQKGYARIDGTLVNSLLLDTYISSRREQRKTYNVVS-LDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLDELLCSLQSTPGIGGTIGEEKI 238
BLAST of SMED30010944 vs. UniProt/SwissProt
Match: sp|Q03278|PO21_NASVI (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.840e-22 Identity = 123/443 (27.77%), Postives = 201/443 (45.37%), Query Frame = -3 Query: 666 EIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPK-PGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAY----IGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEF--------YHYLGV------PV-------GECPNQTPYDTLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGG 1916 EI L + + + I E + ++ G D +T +D + + LFN+I+ GQ P +L +T+LIPK PG D + +RP+++ S + + F IL+ R I E+ LL Q+ +G E+ ++L+A+++ ++ K L IA LD+K AF SV H I + L + + + + V R T+ G I P RGVRQG P+S +LFN ++ VL + + + MG ++ L +ADD+ L+A + LQA ++ GLE P KC L+ S + + K + ++E + YLGV P+ G+ T L P Q++ + FL R I +GR S D + +R + + LPH+ P Y ++PI+ GG Sbjct: 311 EIKNLWRPISNDEIKEVEACKRTAAGPDGMTTTAWNSID---ECIKSLFNMIMYHGQCPRRYLDSRTVLIPKEPGTM----DPACFRPLSIASVALRHFHRILANR----IGEHGLLDTRQRAFIVADGVAENTSLLSAMIKEARMKIKG-LYIAILDVKKAFDSVEHRSILDALRRKKLPLEMRNYIMWVYRNSKTRLEVVKTKGRWIRP----ARGVRQGDPLSPLLFNCVMDAVLRRLPEN--TGFLMGAEKIGALVFADDLVLLAETREGLQASLSRIEAGLQEQGLEMMPRKCHTLALVPSGKEKKIKVETHKPFTVGNQEITQLGHADQWKYLGVVYNSYGPIQVKINIAGDLQRVTAA-PLKPQQRMAILGMFLIPRF--------IHKLVLGRTSNADVRKGD--KIIRKTVRGWLRLPHDTPIGYFHAPIKEGG 724
BLAST of SMED30010944 vs. UniProt/SwissProt
Match: sp|P16423|POLR_DROME (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.980e-21 Identity = 114/454 (25.11%), Postives = 208/454 (45.81%), Query Frame = -3 Query: 648 SKEIIELDQ--------ITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNST-------DINGXXXXXXXXXXXKDKEFYHYLGV--------------PVGECPNQTPYDTLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDL 1922 S E+I++D IT ++ + + + +SSPG D IT + R + P G +L R+ N+I+ G +P+ +T+ IPK + D +RPI++ S + +IL+ RL I + P Q+G +GC ++ ++ VL HS ++ IA LD+ AF S+ HA I++ L G + FV ++ Y + + + RGV+QG P+S ILFNL ++ +L + S AK +G++ A+ADD+ L A + LQ L++ +++ S +GL+ +KC + + + + ++ LK + + YLG+ +G + L P Q++ +T L +L+ + I + + +R + + NLP + P A++++P ++GG L Sbjct: 327 SGEVIQMDHSLERVWSAITEQD-LRASRVSLSSSPGPDGITPKSAREV-PSGIML-RIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQD---FRPISVPSVLVRQLNAILATRLNSSINWD----PRQRGFLPTDGCADNATIVDLVLRHSHKHFRS-CYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTLPSEIGAK--VGNAITNAAAFADDLVLFAETRMGLQVLLDKTLDFLSIVGLKLNADKCFTVGIKGQPKQKCTVLEAQSFYVGSSEIPSLKRTDEWKYLGINFTATGRVRCNPAEDIGPKLQRLTKAPLKPQQRLFALRTVLIPQLYHKLALGSVAIGVL----------RKTDKLIRYYVRRWLNLPLDVPIAFVHAPPKSGGLGIPSL 757
BLAST of SMED30010944 vs. UniProt/SwissProt
Match: sp|O00370|LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.927e-17 Identity = 67/238 (28.15%), Postives = 108/238 (45.38%), Query Frame = -3 Query: 1161 SPGDDNITYRDLRLLDPE-GKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLH-------PGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAI-SSSPIAKYRMGDSEVQ 1847 SPG D T + E L +LF I G +PN + ILIPKPG+ D ++RPI+L++ KI IL+ R+ + I KL+H PG +G + V++H +K I +D + AF + ++ L +G+D ++ ++R +Y K + +K G RQGCP+S +LFN+ + + AI I ++G EV+ Sbjct: 470 SPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGR--DTTKKENFRPISLMNIDAKILNKILANRIQQHI--KKLIHHDQVGFIPGMQGWFNIRKSIN-------VIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVK 696
BLAST of SMED30010944 vs. UniProt/SwissProt
Match: sp|P08548|LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.951e-16 Identity = 65/238 (27.31%), Postives = 109/238 (45.80%), Query Frame = -3 Query: 1161 SPGDDNITYRDLRLLDPE-GKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLH-------PGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAI-SSSPIAKYRMGDSEVQ 1847 SPG D T + E +L LF I G +PN + LIPKPGK D ++RPI+L++ KI IL+ R+ + I K++H PG +G + V++H K I +D + AF ++ H ++ L IG++ F+ ++ +Y+K + + ++ G RQGCP+S +LFN+ + + +AI I +G E++ Sbjct: 469 SPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGK--DPTRKENYRPISLMNIDAKILNKILTNRIQQHI--KKIIHHDQVGFIPGSQGWFNIRKSIN-------VIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEEIK 695
BLAST of SMED30010944 vs. TrEMBL
Match: A0A159X4Q6 (ORF2-like protein (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0 Identity = 314/319 (98.43%), Postives = 314/319 (98.43%), Query Frame = -3 Query: 1455 ICSYITNYLTDRSLFKMDLTYVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIA 2411 I SYI LTDRS FKMDLTYVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIA Sbjct: 1 IXSYIXXXLTDRSXFKMDLTYVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIA 319
BLAST of SMED30010944 vs. TrEMBL
Match: A0A3L8D8E5 (Reverse transcriptase domain-containing protein OS=Ooceraea biroi OX=2015173 GN=DMN91_010823 PE=4 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.219e-62 Identity = 198/637 (31.08%), Postives = 287/637 (45.05%), Query Frame = -3 Query: 78 LDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEI-ASRIGLEFRPEKCAYLSTSNST---------DINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDT---------------LYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWING--KSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVS-WNFVHRARTNNLAINASKLDG**DE 1904 + T EV ++ S+PG D I Y DLR DP +LL LFN +P W + T+L+ K GD D SWRP+AL T K+F ++ + RLT W+I N L QKG R EGC EHN VL +L ++ +++ + +AWLD+ +AFGSVPHA I + L GV +++ +Y + T I I+ GVRQGCP+S I+F+L I+ V+ A + Y + ILAYADD+ALIA + ++ L+ +VE+ A R+GL F P KCA L + +I G + L + E Y +LGVP G +QTP T L PWQ+V++ F+ RL F R ++ + A D H +R I+ S+ NLP A +Y P GG + L D +LTI AFRLLT + S + SLR V + RI PS + +++G + + W A E G + + R ++ L V E Y L + + + P+ N + + W FVHRAR + L +N ++ G DE Sbjct: 643 MAPFTEGEVDRRLRRMTNSAPGPDGIAYNDLRAADPGARLLTALFNACYRLEAVPPSWKTSNTVLV---YKKGDRDSLESWRPLALGDTMPKLFAAVAADRLTDWVIANDKLCRAQKGFLRDEGCYEHNFVLQEILTDARRTRRHAV-VAWLDLSNAFGSVPHAAIRSALVRAGVPSGLINIWGSMYDGCTTRVRAVDGFTAPIPIRSGVRQGCPLSPIIFDLVIDSVVRAAAELADVGYDILGQTFNILAYADDLALIARTPEGMRQLL-TAVELEAGRVGLHFNPAKCASLHITTGRIGRVLPTVFEIEG-----RPMPTLAEGEPYRHLGVPTGFSVDQTPLTTIEGVLKDIWAVDASLLAPWQRVEVLAAFILPRLDFLLRGAAVEKRPL---RAVDLH-------VRRIVKSWLNLPQRASAEVVYLPPSRGGCGLLPLSDLADVLTIAHAFRLLTASDAVVSGLAWGSLRGVVARRIG-HAPSDEEIASFLSGSLEGRLRGGGEASLWSRARNAARRQANRAAVRWRWSEVTGEMIVECRGPGERIVRVPGSARAQVIHRLRSAVMEYYAGTLLRKPDQGKVFEVSSRVPVSNHFMRGGSFTRFADWRFVHRARLDVLPLNGARRWGTVDE 1258
BLAST of SMED30010944 vs. TrEMBL
Match: A0A3L8DAI7 (Reverse transcriptase domain-containing protein OS=Ooceraea biroi OX=2015173 GN=DMN91_010948 PE=4 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 1.051e-61 Identity = 195/637 (30.61%), Postives = 287/637 (45.05%), Query Frame = -3 Query: 78 LDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEI-ASRIGLEFRPEKCAYLSTSNST---------DINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDT---------------LYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWING--KSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVS-WNFVHRARTNNLAINASKLDG**DE 1904 + T EV ++ S+PG D I Y DLR DP +LL LFN +P W + T+L+ K GD D SWRP+AL T K+F ++ + RLT W+I N L QKG R EGC EHN VL +L ++ +++ + +AWLD+ +AFGSVPHA I + L GV +++ +Y + T I I+ GVRQGCP+S I+F+L I+ V+ A + Y + ILAYADD+ALIA + ++ L+ +VE+ A R+GL F P KCA L + +I G + L + E Y +LGVP G +QTP T L PWQ+V++ F+ RL F R ++ + + + +R I+ S+ NLP A +Y P GG + L D +LTI AFRLLT + S + SLR V + RI + PS + +++G + + W A E G + + R ++ L V E Y L + + + P+ N + + W FVHRAR + L +N ++ G DE Sbjct: 868 MAPFTEGEVDRRLRRMTNSAPGPDGIAYNDLRAADPGARLLTALFNACYRLEAVPPSWKTSNTVLV---YKKGDRDSLESWRPLALGDTMPKLFAAVAADRLTDWVIANDKLCRAQKGFLRDEGCYEHNFVLQEILTDARRTRRHAV-VAWLDLSNAFGSVPHAAIRSALVRAGVPSGLINIWGSMYDGCTTRVRAVDGFTAPIPIRSGVRQGCPLSPIIFDLVIDSVVRAAAELTDVGYDILGQTFNILAYADDLALIARTPEGMRQLL-TAVELEAGRVGLHFNPAKCASLHITTGRIGRVLPTVFEIEG-----RPMPTLAEGEPYRHLGVPTGFSVDQTPLTTIEGVLKDIWAVDASLLAPWQRVEVLAAFILPRLDFLLRGAAVEKRPL----------RAVDLHVRRIVKSWLNLPQRASAEVVYLPPSRGGCGLLPLSDLADVLTIAHAFRLLTASDAVVSGLAWGSLRGVVARRIGHA-PSDEEIASFLSGSLEGRLRGGGEASLWSRARNAARRQANRAAVRWRWSEVTGEMIVECRGPGERIVRVPGSARAQVIHRLRSAVMEYYAGTLLRKPDQGKVFEVSSRVPVSNHFMRGGSFTRFADWRFVHRARLDVLPLNGARRWGTVDE 1483
BLAST of SMED30010944 vs. TrEMBL
Match: K7JWY9 (Reverse transcriptase domain-containing protein OS=Nasonia vitripennis OX=7425 PE=4 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.217e-61 Identity = 218/766 (28.46%), Postives = 333/766 (43.47%), Query Frame = -3 Query: 99 NERRKICNILLAEIATCNANEAYSK-IISAANKSNIKPEHKPYL--GKNFFNSLNSD---------NKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMD---------PDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTD----INGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDTLY---------------PWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSII----YSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASF-LHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNT-VSWNFVHRARTNNLAINASK 2258 E+R+I +L A EA ++ ++ A + +PE + + G + D + K++ Y ++K+ +IL N++ + I F ++ PD VF + S E + IT +EV K N +SPG D ITYRDL DP +LA L+N I P W T LI K GD D S+WRPI+L T K+F +IL+ R+ +W + N QKG FEGC EHN VL + +K +K L +AWLD+ AF SVPH+ I L G+ +++ LYT + + T I I+ GVRQGCP+S +FNL + VL I + Y + LAYADD+A++A+S ++ L+ + A +GL F P KCA L + + ++ ++ L +E Y +LG+P G QTP +TL PWQK+D TFL RL F + I +K T+ II S+ +LP A ++ P GG + L D Y +LT+ ++++L S + +LR S R++ +I +++G S S T+W + R A L +K G+ +G L + R S K L + L + + Y L K + + + N + W F+HRAR + L +NA+K Sbjct: 265 TEQRRIVGLLEAATGREQLEEATTQAMLFLARLTGRRPEPRNAIRPGPRQRHPAQEDVQAQAPDRIQEAKKLQRLYRTSKKRAVQKILAGPNMNCQIDKNTITAHFVELAARRDGGEDWPD--VFDREEPTAASGEAL-CTPITREEVFRRLKGRNNTSPGPDGITYRDLAKADPGAHVLAALYNSIWRIEATPALWGVSNTTLI---YKKGDAMDISNWRPISLGDTVPKLFAAILADRIKRWAVANGRYSASQKGFLEFEGCYEHNFVLQEAIREAKGGRKE-LVVAWLDLASAFTSVPHSSILQALEGHGLPSKARNIISSLYTGMTTRFHTAEGPTDPILIQSGVRQGCPLSPDVFNLTLEVVLREIQRTGEG-YTIEGRRTSHLAYADDVAILADSPAGMRRLLFAAERGARAVGLTFNPAKCATLHIAGRGEEAVRPTEFSVQGTPVRALASEEAYEHLGIPTGYQVRQTPINTLRDLLADIGSIDRSLLAPWQKLDAVGTFLLPRLDFIMQGAHI--------------DKGFLTEADKIIKKAAKSWLSLPQRASAELVFLPPSQGGGGLLPLADLYDMLTVAHSYKMLYSSDVTVSTIAGSTLRRTVSERLKKRASNID-IARFLSGDLDLPRSTSPSTFWTKVRSAALRIKTKLGLRWSWCQEGEVLLMACGDPRAPGTRVSPQTKHLVTTSLRRCLNRHYAESLLAKKDQGKVFEVTRRSGQSNHFLRSGSFTRFCDWRFIHRARLDVLPLNAAK 1007
BLAST of SMED30010944 vs. TrEMBL
Match: A0A3L8D7Z7 (Reverse transcriptase domain-containing protein OS=Ooceraea biroi OX=2015173 GN=DMN91_010459 PE=4 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.471e-61 Identity = 198/637 (31.08%), Postives = 288/637 (45.21%), Query Frame = -3 Query: 78 LDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEI-ASRIGLEFRPEKCAYLSTSNST---------DINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDT---------------LYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWING--KSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVS-WNFVHRARTNNLAINASKLDG**DE 1904 + T EV ++ S+PG D I Y DLR DP +LL LFN +P W + T+L+ K GD D SWRP+AL T K+F ++ + RLT W+I N L QKG R EGC EHN VL +L ++ +++ + +AWLD+ +AFGSVPHA I + L GV +++ +Y + T I I+ GVRQGCP+S I+F+L I+ V+ A + Y + ILAYADD+ALIA + ++ L+ +VE+ A R+GL F P KCA L + +I G + L + E Y +LGVP G +QTP T L PWQ+V++ F+ RL F R ++ + A D H +R I+ S+ NLP A +Y P GG + L D +LTI AFRLLT + S + SLR V + RI + PS + +++G + + W A E G + + R ++ L V E Y L + + + P+ N + + W FVHRAR + L +N ++ G DE Sbjct: 944 MAPFTEGEVDRRLRRMTNSAPGPDGIAYNDLRAADPGARLLTALFNACYRLEAVPPSWKTSNTVLV---YKKGDRDSLESWRPLALGDTMPKLFAAVAADRLTDWVIANDKLCRAQKGFLRDEGCYEHNFVLQEILTDARRTRRHAV-VAWLDLSNAFGSVPHAAIRSALVRAGVPSGLINIWGSMYDGCTTRVRAVDGFTAPIPIRSGVRQGCPLSPIIFDLVIDSVVRAAAELTDVGYDILGQTFNILAYADDLALIARTPEGMRQLL-TAVELEAGRVGLHFNPAKCASLHITTGRIGRVLPTVFEIEG-----RPMPTLAEGEPYRHLGVPTGFSVDQTPLTTIEGVLKDIWAVDASLLAPWQRVEVLAAFILPRLDFLLRGAAVEKRPL---RAVDLH-------VRRIVKSWLNLPQRASAEVVYLPPSRGGCGLLPLSDLADVLTIAHAFRLLTASDAVVSGLAWGSLRGVVARRIGHA-PSDEEIASFLSGSLEGRLRGGGEASLWSRARNAARRQANRAAVRWRWSEVTGEMIVECRGPGERIVRVPGSARAQVIHRLRSAVMEYYAGTLLRKPDQGKVFEVSSRVPVSNHFMRGGSFTRFADWRFVHRARLDVLPLNGARRWGTVDE 1559
BLAST of SMED30010944 vs. Ensembl Cavefish
Match: ENSAMXT00000034560.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000712.1:195631:202616:-1 gene:ENSAMXG00000042811.1 transcript:ENSAMXT00000034560.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 135.191 bits (339), Expect = 1.652e-31 Identity = 122/451 (27.05%), Postives = 215/451 (47.67%), Query Frame = -3 Query: 603 TAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKC-AYLSTSNST-----DINGXXXXXXXXXXXKDKEFYHYLGVPV---------------GECPNQTPYDTLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRL 1892 T KE + + K+ A PG D IT + L DP G+ L RL+ + +G +P + +T LIPK ++ +WRPI + S ++F+ I++ RL + ++P Q+G GC E+ VL ++ H K +++ LA+ ++D AF S+ H +I + L +D+H + +++ Y + +P I +K GV+QG +S ILFNLA++P++ ++ + + Y++G S V LA+ADD+ L+++S +++ I E R GL + KC +L +T D + +L + ++ E YLGV V GE + L P+QKV + F RL + ++K + L +R + + +LP + +YS ++ GG + L +++ +QA RL Sbjct: 430 TVKENLGQIKRNTA--PGPDRITRQMLSDWDPSGEKLERLYTAWMVAGVVPKAFKECRTTLIPKSTSKEALEEVGNWRPITIGSLILRLFSKIMAERLARACP----INPRQRGFISAPGCAENLKVLQGLIGHCK-KERSQLAVVFVDFARAFDSISHEHILSALGQRQLDQHVIKLIQSAYVDCVTRIIMDGAKSPDILMKVGVKQGDSMSPILFNLAMDPLIQSLENLG-SGYKIGGSSVTTLAFADDLVLLSSSWDGMRSNIALLDEFCERTGLRVQSRKCHGFLIRRGATSYTVNDCSPWDLGGEPIHLIEPHEVEKYLGVKVNPWVGITKPDLNSQLGEWVTRIGGAPLKPYQKVGLLNDFAIPRLIYLADHCDLKGVTLA----------TLDGTIRRAVKGWLHLPLSTCGGLLYSRVQDGGLGILKLE---ALVPSIQARRL 859
BLAST of SMED30010944 vs. Ensembl Cavefish
Match: ENSAMXT00000034831.1 (pep primary_assembly:Astyanax_mexicanus-2.0:3:16211297:16215948:1 gene:ENSAMXG00000034228.1 transcript:ENSAMXT00000034831.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 118.242 bits (295), Expect = 2.608e-26 Identity = 71/230 (30.87%), Postives = 120/230 (52.17%), Query Frame = -3 Query: 1170 ASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPG-QKGG-SRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDS 1853 S+PG + + YR + K L +L I+ G IP +W +LIPK S D +RPI+LL+ KIF S+++RRL ++ N L+ QK G + F GC+EHN+++ ++ ++ KK L + +LD+ +AFGSVPHA +W + V E +++ + + G +T ++ G+ GC IS++ F +A+ V++ S + R+ D Sbjct: 387 GSAPGPNGVPYRSYKSAPDVLKFLWKLMAIVWKKGIIPKEWHRAGGVLIPKEKDSVAIDQ---FRPISLLNVEGKIFFSVVARRLATYLKRNNLIDTSVQKAGIAGFSGCIEHNSMIWHQIQTARAEKK-DLHVVFLDLANAFGSVPHALLWKAFNFFRVPEEISRLVKAYFEDIQFCFSVGECVTSWQRLEIGIMAGCTISLLAFTMAME-VIIRASKWVVGGERLHDG 611
BLAST of SMED30010944 vs. Ensembl Cavefish
Match: ENSAMXT00000046127.1 (pep primary_assembly:Astyanax_mexicanus-2.0:7:16384999:16389616:1 gene:ENSAMXG00000035718.1 transcript:ENSAMXT00000046127.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 98.9821 bits (245), Expect = 7.433e-21 Identity = 54/166 (32.53%), Postives = 92/166 (55.42%), Query Frame = -3 Query: 1197 KSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSP 1694 K GD + ++WR + L++ YKIF +L RL K I +K+++ Q G + ++ ++ ++ + K+ ++ I LD K AF S+ Y+W +L + F+ +++LLY K+ +T KIDI RGV+QGCP+S L+ LAINP+L ++ Sbjct: 144 KKGDEYELNNWRQVTLMNIEYKIFAKVLMNRLEK--ILDKIINEEQTCGIKGRSMWDNLCIIRELITN-KHLNESGFYILALDKKKAFDSISREYLWAVLERYNFPDVFIKMIKLLYLKSTVQVKVNGKLTEKIDICRGVKQGCPLSAALYVLAINPLLTSLKKEE 306
BLAST of SMED30010944 vs. Ensembl Cavefish
Match: ENSAMXT00000033573.1 (pep primary_assembly:Astyanax_mexicanus-2.0:3:31407009:31410218:-1 gene:ENSAMXG00000030324.1 transcript:ENSAMXT00000033573.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 99.7525 bits (247), Expect = 1.192e-20 Identity = 71/223 (31.84%), Postives = 115/223 (51.57%), Query Frame = -3 Query: 1227 KEVIFEYKQANASS-PGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPG-QKGG-SRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAIN 1886 KEV K+A +SS PG + Y+ + + L ++ +I G++ W + + IPK S + D +R I+LLS KIF SIL+RRLT ++ N + QKGG GC+EH V+T ++ ++ +K LA+ WLD+ +A+GS+PH + L V ++ Y + + G + + ++ G+ GC IS+ILF LA+N Sbjct: 260 KEVQDVVKKARSSSAPGPSGVPYKVYKNCPLLLERLWKILKVIWRRGKVARQWRFAEGVWIPKEEVSKNIDQ---FRIISLLSVEGKIFFSILARRLTDFLSSNHYIDTSVQKGGIPGVPGCLEHTGVVTQLIREARENK-GDLAVLWLDLANAYGSIPHKLVQTTLERHHVPGQVAELIMNYYDQFSMRVSTGSITSEWHRVEVGIITGCTISVILFVLAMN 478
BLAST of SMED30010944 vs. Ensembl Cavefish
Match: ENSAMXT00000048276.1 (pep primary_assembly:Astyanax_mexicanus-2.0:17:7857318:7859867:1 gene:ENSAMXG00000040121.1 transcript:ENSAMXT00000048276.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 98.9821 bits (245), Expect = 1.806e-20 Identity = 78/264 (29.55%), Postives = 130/264 (49.24%), Query Frame = -3 Query: 1188 DEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANAS-----SPGDDNITYRDL-RLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAK 1961 D F+ ++ + ++++LD E E K+A S SPG D I L + D G + + ++ G D S L+ KPGK D + SS+RP++LL+T K+F +L++RL I + L+H Q G R ++ L +LE + S+ A+ LD + AF + ++W +L G F+ ++ LYT ++ G +I+ K ++RG RQGCP+S LF LA+ P+ A+ + + K Sbjct: 431 DNFLKPLNLSSLAPHQVMQLDAPITLE---ELKEAIISMQTHKSPGLDGIPPELLVAVWDLVGPIFLKSVEYSLEIGSFHRDQNSALISLLLKPGK--DSTECSSYRPLSLLNTDVKVFAKVLAKRLDSVIPD--LIHSDQTGFIRSRLASDNLRRLFHILEFAP-SQMLGSAVLSLDAEKAFDRLEWPFLWAVLKRFGFGSAFIHMIFTLYTNPSACVSTGHMISAKFLLERGTRQGCPLSPFLFALAVEPLAQAVRQNALIK 686
BLAST of SMED30010944 vs. Ensembl Nematostella
Match: EDO47846 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKZ5]) HSP 1 Score: 53.5286 bits (127), Expect = 1.551e-8 Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = -3 Query: 1551 KQANASSPGDDNITYRDLRL----LDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKG 1865 K N +PG D I L+ L P ++++FN+I+D+G P+ W +I KSGD D S +R I + S K+F IL+ RL ++ N++LH Q G Sbjct: 2 KLKNNKAPGIDRIRNEMLKCGQQTLVP---CISKIFNLILDAGVYPDVWTRG---IISAIYKSGDKSDPSDYRGICVTSCLGKLFCFILNNRLQTFLTSNQILHQSQIG 104
BLAST of SMED30010944 vs. Ensembl Nematostella
Match: EDO35961 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJY4]) HSP 1 Score: 47.7506 bits (112), Expect = 1.062e-6 Identity = 28/85 (32.94%), Postives = 46/85 (54.12%), Query Frame = -3 Query: 1551 LDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKG 1805 ++ +G+ +LFN ++ G W I + KSGD D ++R IA+ S K FT I++ RLTK++ + K+L+ Q G Sbjct: 17 VESQGRYFEKLFNTVLAQGVFSKSW---SKGYIVQLHKSGDKCDRGNYRGIAISSCLGKFFTLIINGRLTKFLKKYKILNRYQIG 98
BLAST of SMED30010944 vs. Ensembl Medaka
Match: ENSORLT00000043450.1 (pep primary_assembly:ASM223467v1:12:7314868:7318593:-1 gene:ENSORLG00000025257.1 transcript:ENSORLT00000043450.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 105.916 bits (263), Expect = 1.503e-22 Identity = 93/309 (30.10%), Postives = 145/309 (46.93%), Query Frame = -3 Query: 999 EIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLL-DPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNS--TDING 1916 E+I L+++T +Y + N SPG D +T + D L ++F I+ G +P LIPKP K D +WRPI LL+ YKI IL+ R+ + + ++ Q G + + ++ VL++S+ + L I +LD AF S+ H +I L G + F + ++ LY +NS +P+ +KRGVRQGCP+S+ LF L++ + + I SP+ + + E+ I ADD AL A+ + IN + GL KC L N T I G Sbjct: 447 EVISLNEVTDA---IKYLKIN-KSPGTDGLTAEFYKQFSDNLAPFLLKVFEESINKGALPPTLSQGLITLIPKPRK--DPLSLDNWRPITLLNCDYKILALILANRIKP--VLDTIIDENQSGFMQNRHISNNIRLILDVLDYSELVQDDSL-ILFLDFYKAFDSLEHNFIIAALNKFGFGQFFCNAVQTLYVNSNSSIKLASGTSPRFFLKRGVRQGCPLSVYLFLLSVQLLNLHIKLSPLKGLIVAEREIFISQLADDTALFLRDASQVAVAINIIQSFSKASGLTLNLNKCEILPVKNCLLTSIQG 746
BLAST of SMED30010944 vs. Ensembl Medaka
Match: ENSORLT00000028663.1 (pep primary_assembly:ASM223467v1:7:26712747:26716472:-1 gene:ENSORLG00000028539.1 transcript:ENSORLT00000028663.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 105.916 bits (263), Expect = 1.568e-22 Identity = 119/439 (27.11%), Postives = 191/439 (43.51%), Query Frame = -3 Query: 648 EIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLL-DPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNS--TDINGXXXXXXXXXXXKDKEFYHYLGVPV-----GECP-NQTPY-----DTLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFF--NLPHNAPKAYIYSPIETGGAAFIDL 1916 ++I L+++T +Y + N SPG D +T + D L ++F I+ G +P LIPKP K D +WRPI LL+ YKI IL+ R+ + + ++ Q G + + ++ +L++S+ + L I +LD AF S+ H +I L G + F + ++ LY +NS +P+ +KRGVRQGCP+S+ LF L++ + + I SP+ + + E+ I ADD AL A+ + IN + GL KC L N T I G+ + K YLG+ + C N +P TL W + D+ L R+ T+ IS + + N + + I+Y+F N H K+ I + + GG ID Sbjct: 447 DVISLNEVTDA---IKYLKIN-KSPGKDGLTAEFYKQFSDNLAPFLLKVFEESINKGALPPTLSQGLITLIPKPRK--DPLSLDNWRPITLLNCDYKILALILANRIKP--VLDTIIDENQSGFMQNRHISNNIRLILDILDYSELVQDDSL-ILFLDFYKAFDSLEHNFIIAALNKFGFGQFFCNAVQTLYVNSNSSIKLASGTSPRFFLKRGVRQGCPLSVYLFLLSVQLLNLHIKLSPLKGLIVAEREIFISQLADDTALFLRDASQVAVAINIIQSFSKASGLTLNLNKCEILPVKNCLLTSIQGIPV----------KTSVTYLGIQITKDMQSRCSTNFSPIIDKTKKTLNQWLQRDLS---LKGRV---LLTKAEGISRLTYAAQSLQVNNTVCNTINRILYNFLWRNKTHYIRKSVILNTSDKGGLNCIDF 860
BLAST of SMED30010944 vs. Ensembl Medaka
Match: ENSORLT00000035976.1 (pep primary_assembly:ASM223467v1:16:7718738:7727892:1 gene:ENSORLG00000029559.1 transcript:ENSORLT00000035976.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 102.449 bits (254), Expect = 1.633e-22 Identity = 72/224 (32.14%), Postives = 108/224 (48.21%), Query Frame = -3 Query: 1203 KQANASSPGDDNIT---YRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISS 1865 +Q SPG D +T Y+ R D LL+R+F G++P L +L D D+ +RPI LL+T YKI TS+L+ RL + + +L Q G + + L +EH + S L + D AF V H ++W +L G E F+S +R LYT +S C T I R +RQGCP+S +LF++A+ P+ I++ Sbjct: 104 RQNRNKSPGADGLTAEFYQCFR--DDLVPLLSRMFGSFC-LGRLPTFCLGTVKLLFKNKRDRADLDN---YRPITLLNTDYKILTSVLAERLREVL--PSILGSSQAYGVQGRQITDTVLSLLCTVEHMERSGFFFLNV---DFSKAFDRVEHGFLWRVLDLFGFGELFISRIRALYTTASSRVLCNGHSTGVFSITRSIRQGCPLSAMLFSIAVEPLAGVITA 316
BLAST of SMED30010944 vs. Ensembl Medaka
Match: ENSORLT00000037544.1 (pep primary_assembly:ASM223467v1:22:28708275:28712000:-1 gene:ENSORLG00000028184.1 transcript:ENSORLT00000037544.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 104.375 bits (259), Expect = 4.270e-22 Identity = 118/439 (26.88%), Postives = 191/439 (43.51%), Query Frame = -3 Query: 648 EIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLL-DPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNS--TDINGXXXXXXXXXXXKDKEFYHYLGVPV-----GECP-NQTPY-----DTLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFF--NLPHNAPKAYIYSPIETGGAAFIDL 1916 ++I L+++T +Y + N SPG D +T + D L ++F I+ G +P LIPKP K D +WRPI LL+ YKI IL+ R+ + + ++ Q G + + ++ +L++S+ + L I +LD AF S+ H +I L G + F + ++ LY +NS +P+ +KRGVRQGCP+S+ LF L++ + + I SP+ + + E+ I ADD AL A+ + IN + GL KC L N T I G+ + K YLG+ + +C N +P L W + D+ L R+ T+ IS + + N + + I+Y+F N H K+ I + + GG ID Sbjct: 447 DVISLNEVTDA---IKYLKIN-KSPGKDGLTAEFYKQFSDNLAPFLLKVFEESINKGALPPTLSQGLITLIPKPRK--DPLSLDNWRPITLLNCDYKILALILANRIKP--VLDTIIDENQSGFMQNRHISNNIRLILDILDYSELVQDDSL-ILFLDFYKAFDSLEHNFIIAALNKFGFGQFFCNAVQTLYVNSNSSIKLASGTSPRFFLKRGVRQGCPLSVYLFLLSVQLLNLHIKLSPLKGLIVAEREIFISQLADDTALFLRDASQVAVAINIIQSFSKASGLTLNLNKCEILPVKNCLLTSIQGIPV----------KTSVTYLGIQITKDMQSKCSTNFSPIIDKTKKNLNQWLQRDLS---LKGRV---LLTKAEGISRLTYAAQSLQVNNTVCNTINRILYNFLWRNKTHYIRKSVILNTSDKGGLNCIDF 860
BLAST of SMED30010944 vs. Ensembl Medaka
Match: ENSORLT00000045921.1 (pep primary_assembly:ASM223467v1:18:29376025:29377426:1 gene:ENSORLG00000028454.1 transcript:ENSORLT00000045921.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 99.3673 bits (246), Expect = 4.482e-22 Identity = 70/210 (33.33%), Postives = 105/210 (50.00%), Query Frame = -3 Query: 1194 RLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRF----EGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPI 1811 ++L P +L FN +G +P IL+PKPGK + + RPI+LL++ KI IL+ RL +N L H + + F +G HN + H A A+ D + AF V +++N+LA +G E F ++LLYT + I+ I+IKRG RQGCP+S +LF LAI P+ +A+ + PI Sbjct: 90 KILKPMLDMLQESFN----NGALPKSMTCALIILLPKPGKPSN--KCENMRPISLLNSDLKIICKILAMRL-----QNTLPHVVHRDQNGFILGRQGL--HNVRRVLNIIHG-LEDTADQALLSFDAEKAFDKVEWPFLFNVLAKLGFGETFRKWIQLLYTNPTAEILTNKNISAPIEIKRGCRQGCPLSPLLFTLAIEPLAIAVRAHPI 285
BLAST of SMED30010944 vs. Planmine SMEST
Match: SMESG000062936.1 (SMESG000062936.1) HSP 1 Score: 1763.04 bits (4565), Expect = 0.000e+0 Identity = 917/1011 (90.70%), Postives = 927/1011 (91.69%), Query Frame = -3 Query: 105 LLSNLKIIGETLTMLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCKASFKXXXXXXXXXXXSDDWIDCEVGRYIPNSLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDT---------------LYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLAINA 3092 LLSNLKIIGETLTMLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCK+SFKIIINSINNNNISDDWIDCE GRYI NS+K+NKI LTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLL+IDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLT VGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISA NKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYC KSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKS + T++L EHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLL YIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQILAYADDIALIANSATDLQALI +SVEIASRIGLEFRPEKCAYLSTSNS+DINGVNLN+VKLKKLKDKEFYHYLGVPVGECPNQTPYDT LYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCP TSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTN LAINA Sbjct: 371 LLSNLKIIGETLTMLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCKSSFKIIINSINNNNISDDWIDCEFGRYIDNSIKANKIPLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLIIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTCVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAVNKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCTKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKS--------------------VLTAVL--------------------------------------EHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLTYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQILAYADDIALIANSATDLQALIESSVEIASRIGLEFRPEKCAYLSTSNSSDINGVNLNDVKLKKLKDKEFYHYLGVPVGECPNQTPYDTLEKLLSDANKIKNSDLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPNTSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNTLAINA 1323 HSP 2 Score: 92.0485 bits (227), Expect = 2.313e-18 Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = -1 Query: 3074 DEVASDNLIVINETFIIDNITYKQFKEIAYIVCPFRSNDVIYIFFFYLI*K 3226 DEVASDNLIVINETFIIDNITYKQFKEIAYIVCPFRSNDVI+IFF+ I K Sbjct: 309 DEVASDNLIVINETFIIDNITYKQFKEIAYIVCPFRSNDVIHIFFYNKISK 359
BLAST of SMED30010944 vs. Planmine SMEST
Match: SMESG000024308.1 (SMESG000024308.1) HSP 1 Score: 882.863 bits (2280), Expect = 0.000e+0 Identity = 446/456 (97.81%), Postives = 451/456 (98.90%), Query Frame = -3 Query: 1686 MLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCKASFKXXXXXXXXXXXSDDWIDCEVGRYIPNSLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSG 3053 MLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCKASFKIIINSINNNNISDDWIDCE GRYIPNS+K+NKI LTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLL+IDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLT VGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISA NKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFN+IIDSG+IPNDWLSFKTILIPKPGK G Sbjct: 1 MLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCKASFKIIINSINNNNISDDWIDCEFGRYIPNSIKANKIPLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLIIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTCVGNKLESILLPPKQNTDQNILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAVNKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNLIIDSGEIPNDWLSFKTILIPKPGKVG 456
BLAST of SMED30010944 vs. Planmine SMEST
Match: SMESG000021486.1 (SMESG000021486.1) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 410/944 (43.43%), Postives = 564/944 (59.75%), Query Frame = -3 Query: 105 SLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLP----PKQNTDQNILKLPLICKT---INERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSIS-DYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYD---------------TLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDI-LLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLAINA 2864 S+K + + LN+ IN K++ KYF +L N + L+NET+ A++ D +H+ +FL+ L+ A +IF I PP + LL+IDY +++NPT+ I N I+ ++ G M +DIR GL S +LIC++I NY D L ++L +G + S LLP K+ ++ K+ I K+ + +R+ + LL +++ NE II +K +HKPYLG NK I ++ + + K ++ + N+ RP+ + I+ F P + ++ ++C +SK+ + L+ + E++F+ K+A+ +SPG D I YRDL LLDPEGKLL LFN II + IP+ W SFKT+L PKP K G YDD SSWRPIALLS YK+F S L+ RLT WI N LLH GQKGGSR +GCVEHN++L+A LEHSKYSK PLAIAWLDIKDAFGSVPH Y+W+LL +IGV E F S+L+LLY+ T+++Y CGP++TP I IK+GV+QGCPISMILF LAINPVL A+S S + +G+S V+ILAYADDIALIA S DLQ + N +V A+ IG E+RPEKC YL + + +NN K+KKL KEFY YLGVPVGE P+Q+PYD L WQK+ YK F+HSRL F FRTREIK A+ + + ++ + N+S+QLR LP+ + +Y Y+ E GGA +DL DEY TI FRLLT +C + DSL+FV R+ I PS+ + L+W NGK K + +KT + R R A+ + T I + + D SL IT RGT I+ S RK + LH + ++Y ++NFIA P INKAIF+S L+ +WNF+HRARTN L+I A Sbjct: 2730 SVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISS-LLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIID-IIVRQFPDRVKSKHKPYLGNK--TRPQKINKGILVRK-FMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFQGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGGANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFA 3668 HSP 2 Score: 690.263 bits (1780), Expect = 0.000e+0 Identity = 410/944 (43.43%), Postives = 563/944 (59.64%), Query Frame = -3 Query: 105 SLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLP----PKQNTDQNILKLPLICKT---INERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSIS-DYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYD---------------TLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDI-LLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLAINA 2864 S+K + + LN+ IN K++ KYF +L N + L+NET+ A++ D +H+ +FL+ L+ A +IF I PP + LL+IDY +++NPT+ I N I+ ++ G M +DIR GL S +LIC++I NY D L ++L +G + S LLP K+ ++ K+ I K+ + +R+ + LL +++ NE II +K +HKPYLG NK I ++ + + K ++ + N+ RP+ + I+ F P ++ ++C +SK+ + L+ + E++F+ K+A+ +SPG D I YRDL LLDPEGKLL LFN II + IP+ W SFKT+L PKP K G YDD SSWRPIALLS YK+F S L+ RLT WI N LLH GQKGGSR +GCVEHN++L+A LEHSKYSK PLAIAWLDIKDAFGSVPH Y+W+LL +IGV E F S+L+LLY+ T+++Y CGP++TP I IK+GV+QGCPISMILF LAINPVL A+S S + +G+S V+ILAYADDIALIA S DLQ + N +V A+ IG E+RPEKC YL + + +NN K+KKL KEFY YLGVPVGE P+Q+PYD L WQK+ YK F+HSRL F FRTREIK A+ + + ++ + N+S+QLR LP+ + +Y Y+ E GGA +DL DEY TI FRLLT +C + DSL+FV R+ I PS+ + L+W NGK K + +KT + R R A+ + T I + + D SL IT RGT I+ S RK + LH + ++Y ++NFIA P INKAIF+S L+ +WNF+HRARTN L+I A Sbjct: 5086 SVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISS-LLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIID-IIVRQFPDRVKSKHKPYLGNK--TRPQKINKGILVRK-FMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGGANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFA 6024 HSP 3 Score: 334.724 bits (857), Expect = 6.507e-94 Identity = 202/445 (45.39%), Postives = 267/445 (60.00%), Query Frame = -3 Query: 114 LLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYD---------------TLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLE-YDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLA 1400 LL ++ V FV++L+LLYT T+S+Y C + TP I IK+GV+QGCPISMILF +AINPVL AIS S + +G S VQ+LAYADDIALIA +++DLQ L + +V A+ IG E+RPEKCAY+ ++ + +NNV +KKL EFY YLGVP+G+ +Q+PY+ LY WQK+ YK FLHSRL F FRTREIK S++ PS N N ++QLR + NLP+++ +Y Y+ E GGA IDL DEY TIV FRLLT C + + SL V S R+ I P++SQ EWINGK K N +KT + R R +I + I +L E + S+RIT GT II RK L+ LH +Q++Y +N + CPL+NK IF+S L W F+HRARTN L+ Sbjct: 902 LLKHMNVSAEFVNILQLLYTDTSSFYQCNQMQTPDIPIKKGVKQGCPISMILFAIAINPVLEAISLSNTTPFMIGTSSVQVLAYADDIALIATNSSDLQTLFDLAVNTANMIGFEYRPEKCAYIQYPKVETVSEIIVNNVLIKKLASNEFYQYLGVPIGDNNDQSPYEIVSKVIEDTKKIAHSNLYGWQKLKAYKIFLHSRLIFPFRTREIKTSSLADPSRNSRINVNNTSQLRGHLRKILNLPNHSEISYFYNSTENGGAGCIDLLDEYHAQTIVYFFRLLTSTCGYSKTINTFSLLSVTSPRLGIKNPTLSQSFEWINGKESKLNHSGRKTRFHRLRTSIEYFSRVHNIKLLFEIFKQNPSIRITTSLTGTRIILPKLRKTLSKILHSALQDSYLSKWEMSNHSNLLVSAIKLCPLVNKLIFRSDLTDFEWKFIHRARTNTLS 1346 HSP 4 Score: 122.094 bits (305), Expect = 2.274e-27 Identity = 119/445 (26.74%), Postives = 211/445 (47.42%), Query Frame = -3 Query: 1875 CLYSLSL*IQ*CNIYIF----LLSNLKIIGETLTMLFNQFCRSEIVQMSTDY--SKAQFMEYDDLNVCKASFKXXXXXXXXXXXSDDWIDCEVGRYIPNSLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLPPKQNTDQ------------NILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANK-SNIKPEH--KPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMD-PDEFVFSISDYCIKSKEIIELDQITAKEVI 3143 CL+ S+ ++ +I+ F + L IG +T NQFC + V+ ++ S + F+ YD F + + + +DC+ + +K+ + + IN K+ I +YF L +D Y L+N+TL A+ D Q++ +FL+ ++ A++IF I PP + LLVIDY + L+P ++ + + +L I+ +R + G A HDIR GL S ILIC++I NY D SL ++L +G K+ + L+P +D N LKL L +R++ N LL +++ + +E I++ + N++ + +PYLGKN ++ K + N K RIL++ ++ P + I+N FT D E ++ + S E++EL I+++E++ Sbjct: 467 CLFIYSIKLKHSHIFDFNYRTIDDRLIEIGVKITDYLNQFCLNRNVKFLANHHISHSTFLSYD-----TQYFASHFIVLFEKLVYEIHLDCDKVYDSLSKIKTETCIEISPGLNLINGKITDKIIFEYFNKLKLSDDYILLNKTLCVAISDDCTQYMKDFLNIECMMKANVIFAIISPPKVHELLLVIDYSTEEHYYLSPVTTDLNVVSQHFCYNILIKINELRESKGRAMKTGHCRHDIRGSGLLSKILICAFIRNYALDYSLENINLHEIG-KIVNSLVPIVDGSDNVKYEKREKLKAANTLKLNL-----KQRKEKINQLLIKLSDSDVDEIICTILTNIPRLENLQKKEFREPYLGKN-----HNKPKKFNNPAEFLTNMKTTVYRILNDQSVKIEPPFQEIINNFTHPDVVPECWDNVLKFSKISDELLELTYISSEEIL 895 HSP 5 Score: 71.2478 bits (173), Expect = 5.832e-12 Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = -1 Query: 3317 DNITFSDGLFYATNKVTEFDFST--GCSDILFNLGHVNFYKISKSNKDFQEILKISNINEKIINMIFLLNCLKLENKIAQNSKLPYHRFAYNYILNCGVLHSVLSVDELANYRLEDFQTWGPQEIRK----ETHHRRCTIRL 3724 + I+F G F N+ + D S G SDI+FN+G +NF+++ + + + +EKII++IF LN L+L+ ++ S Y + NY+ NC L+S+ ++ L+D + W P ++ H C RL Sbjct: 2010 EQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERL 2151 HSP 6 Score: 71.2478 bits (173), Expect = 5.832e-12 Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = -1 Query: 3317 DNITFSDGLFYATNKVTEFDFST--GCSDILFNLGHVNFYKISKSNKDFQEILKISNINEKIINMIFLLNCLKLENKIAQNSKLPYHRFAYNYILNCGVLHSVLSVDELANYRLEDFQTWGPQEIRK----ETHHRRCTIRL 3724 + I+F G F N+ + D S G SDI+FN+G +NF+++ + + + +EKII++IF LN L+L+ ++ S Y + NY+ NC L+S+ ++ L+D + W P ++ H C RL Sbjct: 4359 EQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERL 4500
BLAST of SMED30010944 vs. Planmine SMEST
Match: SMESG000021486.1 (SMESG000021486.1) HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0 Identity = 410/944 (43.43%), Postives = 564/944 (59.75%), Query Frame = -3 Query: 105 SLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLP----PKQNTDQNILKLPLICKT---INERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSIS-DYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYD---------------TLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDI-LLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLAINA 2864 S+K + + LN+ IN K++ KYF +L N + L+NET+ A++ D +H+ +FL+ L+ A +IF I PP + LL+IDY +++NPT+ I N I+ ++ G M +DIR GL S +LIC++I NY D L ++L +G + S LLP K+ ++ K+ I K+ + +R+ + LL +++ NE II +K +HKPYLG NK I ++ + + K ++ + N+ RP+ + I+ F P + ++ ++C +SK+ + L+ + E++F+ K+A+ +SPG D I YRDL LLDPEGKLL LFN II + IP+ W SFKT+L PKP K G YDD SSWRPIALLS YK+F S L+ RLT WI N LLH GQKGGSR +GCVEHN++L+A LEHSKYSK PLAIAWLDIKDAFGSVPH Y+W+LL +IGV E F S+L+LLY+ T+++Y CGP++TP I IK+GV+QGCPISMILF LAINPVL A+S S + +G+S V+ILAYADDIALIA S DLQ + N +V A+ IG E+RPEKC YL + + +NN K+KKL KEFY YLGVPVGE P+Q+PYD L WQK+ YK F+HSRL F FRTREIK A+ + + ++ + N+S+QLR LP+ + +Y Y+ E GGA +DL DEY TI FRLLT +C + DSL+FV R+ I PS+ + L+W NGK K + +KT + R R A+ + T I + + D SL IT RGT I+ S RK + LH + ++Y ++NFIA P INKAIF+S L+ +WNF+HRARTN L+I A Sbjct: 2701 SVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISS-LLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIID-IIVRQFPDRVKSKHKPYLGNK--TRPQKINKGILVRK-FMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFQGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGGANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFA 3639 HSP 2 Score: 689.493 bits (1778), Expect = 0.000e+0 Identity = 410/944 (43.43%), Postives = 563/944 (59.64%), Query Frame = -3 Query: 105 SLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLP----PKQNTDQNILKLPLICKT---INERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVFSIS-DYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYD---------------TLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDI-LLEYDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLAINA 2864 S+K + + LN+ IN K++ KYF +L N + L+NET+ A++ D +H+ +FL+ L+ A +IF I PP + LL+IDY +++NPT+ I N I+ ++ G M +DIR GL S +LIC++I NY D L ++L +G + S LLP K+ ++ K+ I K+ + +R+ + LL +++ NE II +K +HKPYLG NK I ++ + + K ++ + N+ RP+ + I+ F P ++ ++C +SK+ + L+ + E++F+ K+A+ +SPG D I YRDL LLDPEGKLL LFN II + IP+ W SFKT+L PKP K G YDD SSWRPIALLS YK+F S L+ RLT WI N LLH GQKGGSR +GCVEHN++L+A LEHSKYSK PLAIAWLDIKDAFGSVPH Y+W+LL +IGV E F S+L+LLY+ T+++Y CGP++TP I IK+GV+QGCPISMILF LAINPVL A+S S + +G+S V+ILAYADDIALIA S DLQ + N +V A+ IG E+RPEKC YL + + +NN K+KKL KEFY YLGVPVGE P+Q+PYD L WQK+ YK F+HSRL F FRTREIK A+ + + ++ + N+S+QLR LP+ + +Y Y+ E GGA +DL DEY TI FRLLT +C + DSL+FV R+ I PS+ + L+W NGK K + +KT + R R A+ + T I + + D SL IT RGT I+ S RK + LH + ++Y ++NFIA P INKAIF+S L+ +WNF+HRARTN L+I A Sbjct: 5028 SVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISS-LLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIID-IIVRQFPDRVKSKHKPYLGNK--TRPQKINKGILVRK-FMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGGANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFA 5966 HSP 3 Score: 334.339 bits (856), Expect = 8.829e-94 Identity = 202/445 (45.39%), Postives = 267/445 (60.00%), Query Frame = -3 Query: 114 LLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYD---------------TLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLE-YDGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKLNNFIADTYVKCPLINKAIFKSRLNTVSWNFVHRARTNNLA 1400 LL ++ V FV++L+LLYT T+S+Y C + TP I IK+GV+QGCPISMILF +AINPVL AIS S + +G S VQ+LAYADDIALIA +++DLQ L + +V A+ IG E+RPEKCAY+ ++ + +NNV +KKL EFY YLGVP+G+ +Q+PY+ LY WQK+ YK FLHSRL F FRTREIK S++ PS N N ++QLR + NLP+++ +Y Y+ E GGA IDL DEY TIV FRLLT C + + SL V S R+ I P++SQ EWINGK K N +KT + R R +I + I +L E + S+RIT GT II RK L+ LH +Q++Y +N + CPL+NK IF+S L W F+HRARTN L+ Sbjct: 902 LLKHMNVSAEFVNILQLLYTDTSSFYQCNQMQTPDIPIKKGVKQGCPISMILFAIAINPVLEAISLSNTTPFMIGTSSVQVLAYADDIALIATNSSDLQTLFDLAVNTANMIGFEYRPEKCAYIQYPKVETVSEIIVNNVLIKKLASNEFYQYLGVPIGDNNDQSPYEIVSKVIEDTKKIAHSNLYGWQKLKAYKIFLHSRLIFPFRTREIKTSSLADPSRNSRINVNNTSQLRGHLRKILNLPNHSEISYFYNSTENGGAGCIDLLDEYHAQTIVYFFRLLTSTCGYSKTINTFSLLSVTSPRLGIKNPTLSQSFEWINGKESKLNHSGRKTRFHRLRTSIEYFSRVHNIKLLFEIFKQNPSIRITTSLTGTRIILPKLRKTLSKILHSALQDSYLSKWEMSNHSNLLVSAIKLCPLVNKLIFRSDLTDFEWKFIHRARTNTLS 1346 HSP 4 Score: 121.709 bits (304), Expect = 2.514e-27 Identity = 119/445 (26.74%), Postives = 211/445 (47.42%), Query Frame = -3 Query: 1875 CLYSLSL*IQ*CNIYIF----LLSNLKIIGETLTMLFNQFCRSEIVQMSTDY--SKAQFMEYDDLNVCKASFKXXXXXXXXXXXSDDWIDCEVGRYIPNSLKSNKISLTTLNVIGINAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLPPKQNTDQ------------NILKLPLICKTINERRKICNILLAEIATCNANEAYSKIISAANK-SNIKPEH--KPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMD-PDEFVFSISDYCIKSKEIIELDQITAKEVI 3143 CL+ S+ ++ +I+ F + L IG +T NQFC + V+ ++ S + F+ YD F + + + +DC+ + +K+ + + IN K+ I +YF L +D Y L+N+TL A+ D Q++ +FL+ ++ A++IF I PP + LLVIDY + L+P ++ + + +L I+ +R + G A HDIR GL S ILIC++I NY D SL ++L +G K+ + L+P +D N LKL L +R++ N LL +++ + +E I++ + N++ + +PYLGKN ++ K + N K RIL++ ++ P + I+N FT D E ++ + S E++EL I+++E++ Sbjct: 467 CLFIYSIKLKHSHIFDFNYRTIDDRLIEIGVKITDYLNQFCLNRNVKFLANHHISHSTFLSYD-----TQYFASHFIVLFEKLVYEIHLDCDKVYDSLSKIKTETCIEISPGLNLINGKITDKIIFEYFNKLKLSDDYILLNKTLCVAISDDCTQYMKDFLNIECMMKANVIFAIISPPKVHELLLVIDYSTEEHYYLSPVTTDLNVVSQHFCYNILIKINELRESKGRAMKTGHCRHDIRGSGLLSKILICAFIRNYALDYSLENINLHEIG-KIVNSLVPIVDGSDNVKYEKREKLKAANTLKLNL-----KQRKEKINQLLIKLSDSDVDEIICTILTNIPRLENLQKKEFREPYLGKN-----HNKPKKFNNPAEFLTNMKTTVYRILNDQSVKIEPPFQEIINNFTHPDVVPECWDNVLKFSKISDELLELTYISSEEIL 895 HSP 5 Score: 71.2478 bits (173), Expect = 5.780e-12 Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = -1 Query: 3317 DNITFSDGLFYATNKVTEFDFST--GCSDILFNLGHVNFYKISKSNKDFQEILKISNINEKIINMIFLLNCLKLENKIAQNSKLPYHRFAYNYILNCGVLHSVLSVDELANYRLEDFQTWGPQEIRK----ETHHRRCTIRL 3724 + I+F G F N+ + D S G SDI+FN+G +NF+++ + + + +EKII++IF LN L+L+ ++ S Y + NY+ NC L+S+ ++ L+D + W P ++ H C RL Sbjct: 2010 EQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERL 2151 HSP 6 Score: 71.2478 bits (173), Expect = 5.780e-12 Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = -1 Query: 3317 DNITFSDGLFYATNKVTEFDFST--GCSDILFNLGHVNFYKISKSNKDFQEILKISNINEKIINMIFLLNCLKLENKIAQNSKLPYHRFAYNYILNCGVLHSVLSVDELANYRLEDFQTWGPQEIRK----ETHHRRCTIRL 3724 + I+F G F N+ + D S G SDI+FN+G +NF+++ + + + +EKII++IF LN L+L+ ++ S Y + NY+ NC L+S+ ++ L+D + W P ++ H C RL Sbjct: 4330 EQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERL 4471
BLAST of SMED30010944 vs. Planmine SMEST
Match: SMESG000079542.1 (SMESG000079542.1) HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0 Identity = 351/867 (40.48%), Postives = 504/867 (58.13%), Query Frame = -3 Query: 234 NAKLDGFAIDKYFQSLLDNDKYFLVNETLSDALISDSWQHVAEFLDKTKLLDASIIFVIFVPPSSGKQLLVIDYEKCTSFLLNPTSSKEIPLHVETAFILLNYISSVRNNVGAAPLMTSPLHDIRTCGLFSNILICSYITNYLTDRSLFKMDLTYVGNKLESILLPPKQNTDQNILKLPLICKT-----INERRKICNILLAEIATCNANEAYSKIISAANKSNIKPEHKPYLGKNFFNSLNSDNKMIKIKGGYFHNRKKVATRILDEINIDTRPSMENILNQFTQMDPDEFVF-SISDYCIKSKEIIELDQITAKEVIFEYKQANASSPGDDNITYRDLRLLDPEGKLLARLFNIIIDSGQIPNDWLSFKTILIPKPGKSGDYDDTSSWRPIALLSTSYKIFTSILSRRLTKWIIENKLLHPGQKGGSRFEGCVEHNAVLTAVLEHSKYSKKAPLAIAWLDIKDAFGSVPHAYIWNLLAYIGVDEHFVSVLRLLYTKTNSYYCCGPLITPKIDIKRGVRQGCPISMILFNLAINPVLVAISSSPIAKYRMGDSEVQXXXXXXXXXXXANSATDLQALINNSVEIASRIGLEFRPEKCAYLSTSNSTDINGXXXXXXXXXXXKDKEFYHYLGVPVGECPNQTPYDTLYPWQKVDMYKTFLHSRLHFAFRTREIKISAIGRPSAKDSHNKNLSTQLRSIIYSFFNLPHNAPKAYIYSPIETGGAAFIDLHDEYSILTIVQAFRLLTCKCPITSAVIHDSLRFVASTRIRISGPSISQCLEWINGKSYKKNSLSKKTWWIRFRDAILHLKNTRGIDILLEY-DGFFSLRITAEHRGTTIIYSLDRKKLASFLHKLVQETYYMDLHNGKL 2813 N K+ + +F +L ++ + +N T++ A+++D Q++ EFL+ L+ A I+F I PP + + L++IDY +LLNP+S ++ TA LL I+ ++ L+ + HDIR GL S ILIC++I +Y D SL ++L +GN ++S LLP Q+ ++ +K KT +++R + N L + N NE +KI P K K K + N K +IL I+ RP++++ + F+ DP + ++ ++ +KS+ + L I KEVIFE K+A+ +SPG D I Y D+ + D EGKLL L+N II +P+ W SFKT++ PKP K Y+ SSWRPIALLS YKIF SILSRRLT W+ N LLH GQKGGS +GCVEHN+VL++ LEHSKYSK P+ IA+LDIKDAFGSVPH Y+W +L +IGV E F + L+LLYT+T+SYY CGP++TP I IK+GV+QGCP+SMILF +AINPVL A++ S + +++G+S +Q+LAYADDIALIAN+ DLQ ++N + ++A IG E+RP+KCAY+ N I+ + ++ Y L V + D L WQK+ YKTFLHSRL F FRTR+ KISA+ SA +N +T+LRS + +LP+N+ +Y Y+ +E GGA+ DL DEY TI FRL T C T + DSL+FV R+ + PS+ WIN + KK + R R AI + T I I E D LR+T +GT I+ DR+ ++ LH + ++Y+ N + Sbjct: 54 NCKITEKLLTNFFINLNLSENFIFLNNTMTTAILNDCTQYLNEFLNIENLMKAKIVFAIIAPPKARQILMIIDYTSDEYYLLNPSSLLPNFPYLCTANSLLTKINEIKETPELCKLLGNCPHDIRGSGLVSRILICAFIKHYALDLSLENINLRDIGNVIKS-LLPTVQDIIKDSIKNLSDNKTNVKLKLDQRILLINENLLTLQNANVNEMRNKISKV-------PHPK-----------------TKFKSSFNQNMKTTVYKILVNDEINERPTIKDHIGNFSHQDPLIKSYDNVLNFGLKSQNTLLLRPIIDKEVIFELKRADNTSPGIDGIKYNDIAIHDAEGKLLTLLYNKIITENTMPDVWKSFKTLMTPKPDKGDKYNLISSWRPIALLSVVYKIFASILSRRLTSWVNRNNLLHIGQKGGSVHDGCVEHNSVLSSCLEHSKYSKDTPIIIAFLDIKDAFGSVPHDYMWKILRHIGVGEKFTNTLKLLYTETSSYYTCGPIVTPNIPIKQGVKQGCPLSMILFAIAINPVLQAVTLSKVKPFKVGESSIQVLAYADDIALIANNTHDLQNILNIAFDVAREIGFEYRPKKCAYIQLPNVETIS----------EHTNQSPYEILNKVVSDAKKLADSD-LCGWQKLKAYKTFLHSRLTFPFRTRDFKISAL---SANVCNN---TTKLRSHLRKMMSLPNNSEISYFYNSVENGGASCTDLLDEYHTQTISYFFRLFTANCEFTKRINIDSLKFVTGPRLGNNNPSLQDSFNWINKADIIQKHSGKKPRFFRPRTAIQFFEKTHNITISFEVLDDKPILRLTTALKGTIILTEFDRRLVSKVLHLALYDSYFTKWKNSNI 878 The following BLAST results are available for this feature:
BLAST of SMED30010944 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30010944 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30010944 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30010944 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30010944 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30010944 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30010944 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30010944 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30010944 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30010944 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30010944 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30010944 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of SMED30010944 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30010944 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010944 ID=SMED30010944|Name=SMED30010944|organism=Schmidtea mediterranea sexual|type=transcript|length=3781bpback to top protein sequence of SMED30010944-orf-1 >SMED30010944-orf-1 ID=SMED30010944-orf-1|Name=SMED30010944-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=174bp KTGENSDKSINKILLRNNIDNITFSDGLFYATNKVTEFDFSTGCSDILFNback to top protein sequence of SMED30010944-orf-2 >SMED30010944-orf-2 ID=SMED30010944-orf-2|Name=SMED30010944-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=989bp MLFNQFCRSEIVQMSTDYSKAQFMEYDDLNVCKASFKIIINSINNNNISDback to top Annotated Terms
The following terms have been associated with this transcript:
|