HIT domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010928 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of HIT domain-containing protein vs. Ensembl Human
Match: HINT3 (histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]) HSP 1 Score: 68.9366 bits (167), Expect = 4.305e-14 Identity = 40/138 (28.99%), Postives = 71/138 (51.45%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQ-RDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK--YSPDSYWFKTIDWALDYL 515 S+C+FC + + + + +NE+++ F+DI+PA+ +HYL +P H N + L + + +++ M+ G LE+N D + R+GFH PF I + + + K Y +SYWF T D ++ L Sbjct: 46 STCVFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHMPPF---CSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIEKL 180
BLAST of HIT domain-containing protein vs. Ensembl Celegans
Match: hint-3 (HIstidiNe Triad nucleotide-binding protein [Source:UniProtKB/TrEMBL;Acc:Q18227]) HSP 1 Score: 54.299 bits (129), Expect = 3.384e-9 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCL-----EKNGADIND--CRIGFHWSPF 386 C FCD+V K++++ +N++ VV DI+P + HYL + H L +D+P+++EM K G L +K AD + RIGFH P Sbjct: 10 GCKFCDIV--KNKKELQLKENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRELLREHLKKKGEADTVEDMLRIGFHLPPL 104
BLAST of HIT domain-containing protein vs. Ensembl Celegans
Match: hint-3 (HIstidiNe Triad nucleotide-binding protein [Source:UniProtKB/TrEMBL;Acc:Q18227]) HSP 1 Score: 54.299 bits (129), Expect = 3.384e-9 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCL-----EKNGADIND--CRIGFHWSPF 386 C FCD+V K++++ +N++ VV DI+P + HYL + H L +D+P+++EM K G L +K AD + RIGFH P Sbjct: 10 GCKFCDIV--KNKKELQLKENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRELLREHLKKKGEADTVEDMLRIGFHLPPL 104
BLAST of HIT domain-containing protein vs. Ensembl Celegans
Match: hint-3 (HIstidiNe Triad nucleotide-binding protein [Source:UniProtKB/TrEMBL;Acc:Q18227]) HSP 1 Score: 53.5286 bits (127), Expect = 1.045e-8 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCL-----EKNGADIND--CRIGFHWSPF 386 C FCD+V K++++ +N++ VV DI+P + HYL + H L +D+P+++EM K G L +K AD + RIGFH P Sbjct: 35 GCKFCDIV--KNKKELQLKENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRELLREHLKKKGEADTVEDMLRIGFHLPPL 129
BLAST of HIT domain-containing protein vs. Ensembl Fly
Match: CG34015 (gene:FBgn0054015 transcript:FBtr0100070) HSP 1 Score: 78.9518 bits (193), Expect = 1.557e-18 Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 105 IGKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEKR 524 + +CIFC + +G+ + +N++ V+F+DI+PAS +HYLA+ H ++K LN+S +++ M + L G ++D GFH PF ++ H+H+H ISP T+ F S WFKT+D A YL ++ Sbjct: 1 MADDNCIFCLISDGRIPSTVLEVENDDFVIFQDIKPASQHHYLAVTKKHYASLKDLNKSHDSLVQLMENALKDLLVSKGVSVDDALFGFHLPPFITVKHLHMHAISPR--TQMTFLSKMIFRPSVWFKTVDEARIYLSQK 138
BLAST of HIT domain-containing protein vs. Ensembl Fly
Match: CG15362 (gene:FBgn0031378 transcript:FBtr0077814) HSP 1 Score: 61.6178 bits (148), Expect = 8.372e-12 Identity = 29/90 (32.22%), Postives = 48/90 (53.33%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSI-RFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPF 386 C FCD + + I + + V+F+D PA+ HYLAIP H +++K LN+S + +++ M + + L D + +GFH PF Sbjct: 33 CFFCDFAHRRQGPPPILEVETDEYVIFKDKYPAARLHYLAIPKEHFDSLKALNKSHVGLVRRMEQGMMEFLRSQNVDPKEAIVGFHLPPF 122
BLAST of HIT domain-containing protein vs. Ensembl Zebrafish
Match: hint3 (histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]) HSP 1 Score: 84.3445 bits (207), Expect = 2.424e-20 Identity = 45/133 (33.83%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYL 515 CIFC ++ G+ + + +E V F+DI P + +HYL +P+ H N K L++ +P++++ML+ G LEKN D++D R GFHW PF + + Y +SYWF T D L L Sbjct: 26 CIFCKILKGEMGTELLH-SDETVSCFQDIHPGAPHHYLVVPSKHVGNCKSLSKEHVPLVEKMLETGKEILEKNNVTDLSDVRFGFHWPPF-CSVTHLHLHVLAPVSQMGFMSRLIYRLNSYWFVTADQLLQRL 156
BLAST of HIT domain-containing protein vs. Ensembl Zebrafish
Match: si:dkey-25e12.3 (si:dkey-25e12.3 [Source:NCBI gene;Acc:678527]) HSP 1 Score: 65.855 bits (159), Expect = 2.831e-13 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPF 386 +CIFC + G + I ++E+ V F DI P + +HYL IP H + L DI +++ M + G N L+ N D+ D +GFH P+ Sbjct: 22 TCIFCTIAKGDDRYTEILAEDEDFVCFRDINPGAPHHYLVIPKKHIYSCLSLYADDISLVRGMAEMGRNVLKANNVTDLKDISLGFHVPPY 112
BLAST of HIT domain-containing protein vs. Ensembl Zebrafish
Match: si:dkey-25e12.3 (si:dkey-25e12.3 [Source:NCBI gene;Acc:678527]) HSP 1 Score: 65.855 bits (159), Expect = 2.890e-13 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPF 386 +CIFC + G + I ++E+ V F DI P + +HYL IP H + L DI +++ M + G N L+ N D+ D +GFH P+ Sbjct: 22 TCIFCTIAKGDDRYTEILAEDEDFVCFRDINPGAPHHYLVIPKKHIYSCLSLYADDISLVRGMAEMGRNVLKANNVTDLKDISLGFHVPPY 112
BLAST of HIT domain-containing protein vs. Ensembl Xenopus
Match: cks2 (CDC28 protein kinase regulatory subunit 2 [Source:Xenbase;Acc:XB-GENE-922081]) HSP 1 Score: 82.4185 bits (202), Expect = 1.573e-19 Identity = 44/135 (32.59%), Postives = 69/135 (51.11%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLE 518 SCIFC + N + + ++++V F+DIRPA +HYL +P H K L + + +IK M++ G + L+KN D+ D R+GFH+ PF + + Y +SYWF T D +D L+ Sbjct: 18 SCIFCRIANKQESGAELLHSDDDLVCFKDIRPAVTHHYLVVPKKHVGTCKTLTKDHVQLIKTMMEVGKSTLQKNNVTDLEDIRLGFHYPPF-CSISHLHLHVLAPASQLGFLSRMIYRVNSYWFITADELIDQLQ 151
BLAST of HIT domain-containing protein vs. Ensembl Mouse
Match: Hint3 (histidine triad nucleotide binding protein 3 [Source:MGI Symbol;Acc:MGI:1914097]) HSP 1 Score: 87.0409 bits (214), Expect = 2.575e-21 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQRDSI-RFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK---YSPDSYWFKTIDWALDYLEK 521 S+C+FC V G+ + + +NE++V F+DI+PA+ YHYL +P H + K LN+ I +++ M+ G LE+N D D R+GFH PF HL + K F F Y DSYWF T+D+ L+ L K Sbjct: 29 SNCVFCRVAAGQEPKTELFHCENEDLVCFKDIKPAALYHYLVVPKKHIGSCKDLNKDHIEMVESMVAAGKTMLERNNFTDFTDVRMGFHVPPF----CSISHLHLHVIAPVKEFGFLSKLVYRQDSYWFVTVDYLLEKLRK 165
BLAST of HIT domain-containing protein vs. Ensembl Mouse
Match: Hint3 (histidine triad nucleotide binding protein 3 [Source:MGI Symbol;Acc:MGI:1914097]) HSP 1 Score: 78.9518 bits (193), Expect = 3.591e-18 Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQRDSI-RFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDC------RIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK---YSPDSYWFKTIDWALDYL 515 S+C+FC V G+ + + +NE++V F+DI+PA+ YHYL +P H + K LN+ I +++ M+ G LE+N D D R+GFH PF HL + K F F Y DSYWF T+D+ L+ L Sbjct: 24 SNCVFCRVAAGQEPKTELFHCENEDLVCFKDIKPAALYHYLVVPKKHIGSCKDLNKDHIEMVESMVAAGKTMLERNNFTDFTDVSKLLCFRMGFHVPPF----CSISHLHLHVIAPVKEFGFLSKLVYRQDSYWFVTVDYLLEKL 164
BLAST of HIT domain-containing protein vs. Ensembl Mouse
Match: Hint3 (histidine triad nucleotide binding protein 3 [Source:MGI Symbol;Acc:MGI:1914097]) HSP 1 Score: 51.9878 bits (123), Expect = 7.231e-9 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQRDSI-RFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDI 287 S+C+FC V G+ + + +NE++V F+DI+PA+ YHYL +P H + K LN+ I Sbjct: 23 SNCVFCRVAAGQEPKTELFHCENEDLVCFKDIKPAALYHYLVVPKKHIGSCKDLNKDHI 81
BLAST of HIT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9CPS6|HINT3_MOUSE (Histidine triad nucleotide-binding protein 3 OS=Mus musculus OX=10090 GN=Hint3 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.801e-20 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQRDSI-RFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK---YSPDSYWFKTIDWALDYLEK 521 S+C+FC V G+ + + +NE++V F+DI+PA+ YHYL +P H + K LN+ I +++ M+ G LE+N D D R+GFH PF HL + K F F Y DSYWF T+D+ L+ L K Sbjct: 29 SNCVFCRVAAGQEPKTELFHCENEDLVCFKDIKPAALYHYLVVPKKHIGSCKDLNKDHIEMVESMVAAGKTMLERNNFTDFTDVRMGFHVPPF----CSISHLHLHVIAPVKEFGFLSKLVYRQDSYWFVTVDYLLEKLRK 165
BLAST of HIT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q28BZ2|HINT3_XENTR (Histidine triad nucleotide-binding protein 3 OS=Xenopus tropicalis OX=8364 GN=hint3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.331e-19 Identity = 44/135 (32.59%), Postives = 69/135 (51.11%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLE 518 SCIFC + N + + ++++V F+DIRPA +HYL +P H K L + + +IK M++ G + L+KN D+ D R+GFH+ PF + + Y +SYWF T D +D L+ Sbjct: 18 SCIFCRIANKQESGAELLHSDDDLVCFKDIRPAVTHHYLVVPKKHVGTCKTLTKDHVQLIKTMMEVGKSTLQKNNVTDLEDIRLGFHYPPF-CSISHLHLHVLAPASQLGFLSRMIYRVNSYWFITADELIDQLQ 151
BLAST of HIT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8K3P7|HINT3_RAT (Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 2.855e-18 Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQRDSIRF-QNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK---YSPDSYWFKTIDWALDYLEK 521 S+C+FC V G+ + + +N+++V F+DI+PA+ +HYL +P H + K LN+ I +++ M+ G LE+N D D R+GFH PF HL + K F F Y DSYWF T D+ L+ L K Sbjct: 39 SNCVFCRVAAGQEPETELLYCENKDLVCFKDIKPAALHHYLVVPKKHIGSCKDLNKDHIEMVESMVTVGKTILERNNFTDFTDVRMGFHVPPF----CSVSHLHLHVIAPAKEFGFLSRVVYRRDSYWFITGDYLLEKLRK 175
BLAST of HIT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q2YDJ4|HINT3_BOVIN (Histidine triad nucleotide-binding protein 3 OS=Bos taurus OX=9913 GN=HINT3 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.507e-16 Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQRDSIRF---QNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYL 515 S C+FC + HQ +NE++V F+DI+PA+ +HYL +P H N K+L + I +I+ M+ G LE+N D + R+GFH SPF SI H+HLH+++P Y +SYWF T D+ ++ L Sbjct: 46 SKCVFCRI--AAHQDPGTELLHCENEDLVCFKDIKPAAPHHYLVVPKKHFENCKYLKKDQIELIENMVTVGKAILERNNFTDFENTRMGFHVSPFCSIAHLHLHVLAPADQL-SFMSRLVYRVNSYWFITADYLIEKL 180
BLAST of HIT domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9NQE9|HINT3_HUMAN (Histidine triad nucleotide-binding protein 3 OS=Homo sapiens OX=9606 GN=HINT3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.068e-13 Identity = 40/138 (28.99%), Postives = 71/138 (51.45%), Query Frame = 3 Query: 114 SSCIFCDVVNGKHQ-RDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK--YSPDSYWFKTIDWALDYL 515 S+C+FC + + + + +NE+++ F+DI+PA+ +HYL +P H N + L + + +++ M+ G LE+N D + R+GFH PF I + + + K Y +SYWF T D ++ L Sbjct: 46 STCVFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHMPPF---CSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIEKL 180
BLAST of HIT domain-containing protein vs. TrEMBL
Match: A0A1Z5LEZ3 (Histidine triad nucleotide binding protein (Fragment) OS=Ornithodoros moubata OX=6938 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.591e-26 Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 3 Query: 108 GKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEK 521 G SCIFC + G+ + ++ FQ+E+ VVF DI PA+ +HYL +P H N K L RSDIP++K++++ G L++ G + R GFHW PF+SI H+HLH+ISP+ F Y P S WF T + + YLEK Sbjct: 10 GPDSCIFCKIARGEEPKTAVLFQDEDHVVFRDIHPATKHHYLVVPKKHIKNPKCLTRSDIPLVKQLVEVGKQALQQQGGAVESLRTGFHWPPFNSITHLHLHVISPVEELSFIGRF-VYMPGSLWFCTAEDTVAYLEK 146
BLAST of HIT domain-containing protein vs. TrEMBL
Match: A0A131XAW9 (HIT domain-containing protein OS=Hyalomma excavatum OX=257692 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.228e-25 Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEK 521 +CIFC + GK + ++ +Q+E+ VVF DI PAS HYL +P H ++K L RSDIP++ +++ G + LE+ G + R+GFHW PF + + + P + WF ++ A+DYLEK Sbjct: 18 TCIFCKIATGKDPKSTLLYQDEDYVVFSDIHPASTQHYLVVPKKHMKSVKSLTRSDIPLVNRLIEIGKHVLEQRGGSTDSLRMGFHWPPF-TSISHLHLHVIAPVAEMSMLARVIFMPGTPWFCLVEDAMDYLEK 151
BLAST of HIT domain-containing protein vs. TrEMBL
Match: G3MS16 (HIT domain-containing protein OS=Amblyomma maculatum OX=34609 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.908e-25 Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEK-RP*SP 536 SCIFC +V GK + ++ +Q+E VVF+DI PAS +HYL +P H ++K L +DIPI+ +++ G LE+ G ++ R GFHW PF SI+H+HLH+I+P F + P S WF +D + YLE+ RP +P Sbjct: 20 SCIFCKIVAGKDPKTTLLYQDEEYVVFQDIHPASTHHYLIVPKKHLKDVKSLTYNDIPIVNRLVEIGRQVLEQRGGSLDTSRFGFHWPPFTSISHLHLHVIAPAADMSAIGRF-IFMPGSPWFSLVDDTIAYLERSRPVTP 159
BLAST of HIT domain-containing protein vs. TrEMBL
Match: A0A023GFA9 (HIT domain-containing protein OS=Amblyomma triste OX=251400 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.242e-25 Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEK-RP*SP 536 SCIFC +V GK + ++ +Q+E VVF+DI PAS +HYL +P H ++K L +DIPI+ +++ G LE+ G ++ R GFHW PF SI+H+HLH+I+P F + P S WF +D + YLE+ RP +P Sbjct: 20 SCIFCKIVAGKDPKTTLLYQDEEYVVFQDIHPASTHHYLIVPKKHLKDVKSLTYNDIPIVNRLVEIGKQVLEQRGGSLDTSRFGFHWPPFTSISHLHLHVIAPAADMSTIGRF-IFMPGSPWFSLVDDTIAYLERSRPVAP 159
BLAST of HIT domain-containing protein vs. TrEMBL
Match: A0A131Z375 (Protein kinase c inhibitor like protein OS=Rhipicephalus appendiculatus OX=34631 PE=4 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.687e-25 Identity = 55/138 (39.86%), Postives = 86/138 (62.32%), Query Frame = 3 Query: 108 GKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEK 521 G+ +CIFC + GK + ++ +Q+E+ VVF DI PAS +HYL +P H + K L RSDIP++ +++ G LE+ G ++ CR+GFHW PF SI+H+HLH+I+P + P + WF ++ + YLE+ Sbjct: 11 GEETCIFCKIAAGKEPKTTLLYQDEDYVVFSDIHPASTHHYLIVPKKHVKDTKSLTRSDIPLVNRLVEIGKQVLEQRGGSMDSCRMGFHWPPFTSISHLHLHVIAPTEDM-SMLARLIFRPRTPWFCLVEDTMSYLEQ 147
BLAST of HIT domain-containing protein vs. Ensembl Cavefish
Match: hint3 (histidine triad nucleotide binding protein 3 [Source:NCBI gene;Acc:103030469]) HSP 1 Score: 88.9669 bits (219), Expect = 4.354e-22 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYL 515 CIFC +VN + + +E + F DI+P + +HYL +P H N K LN+ IP+++++++ G L+KN D+ND R GFHW PF + + + PDSYWF T D L L Sbjct: 26 CIFCKIVN-REMDTELLHSDEEISCFRDIKPGAPHHYLVVPTKHVGNCKSLNKEHIPLVEKLMETGKTILQKNNVTDLNDVRFGFHWPPF-HSVVHLHLHVLAPASQMGFMARLIFRPDSYWFITADQLLQRL 156
BLAST of HIT domain-containing protein vs. Ensembl Nematostella
Match: EDO37394 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFV5]) HSP 1 Score: 100.523 bits (249), Expect = 5.119e-27 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEK 521 C+FC + + K Q I +++E + F+D+RPA+D+HYL IP H N K L D+P++++++ G L + A+ D IGFHW PF+SI H+HLH+IS R Y P S+WF T+DW L++L+K Sbjct: 11 CVFCKI-SSKEQETRIIYEDEETLTFKDLRPATDHHYLVIPKQHYGNPKSLTGDDLPLVEKLMDVGKKVLVQQNANTEDTVIGFHWPPFNSIQHLHLHVISDASQMRFA-SRHIYRPGSWWFATVDWMLEHLKK 142
BLAST of HIT domain-containing protein vs. Ensembl Medaka
Match: hint3 (histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]) HSP 1 Score: 76.6406 bits (187), Expect = 1.909e-17 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGA-DINDCRIGFHWSPF 386 CIFC +VN + + + +E + F DI+P + +HYL +P H N K L++ +P++ ++ G L+KN D++D R GFHW PF Sbjct: 21 CIFCRIVN-REMGTELLYSDEEISCFRDIKPGAPHHYLVVPTQHVGNCKSLSKEHVPLVNRLVDVGKEILQKNNVMDLSDVRFGFHWPPF 109
BLAST of HIT domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000036728.1 (histidine triad nucleotide-binding protein 3 [Source:NCBI gene;Acc:101174317]) HSP 1 Score: 70.0922 bits (170), Expect = 8.666e-15 Identity = 42/128 (32.81%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 117 SCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTID 497 +CIFC + + + + Q++ +V F DI PA+ +HYL IP H ++ + L+ I ++ M G + L + G ++ D R+GFH PF S+ H+HLH+++P+ CF + K++P++ +F T+ Sbjct: 11 TCIFCLIAKNQDEETEVIKQDKKLVCFRDIWPAAPHHYLVIPRAHIHSCRSLSGEHIHLVDRMTSMGKDVLREQGITNMEDVRLGFHQPPFISVGHLHLHVLAPVRQISTCFEY-KFTPETDFFVTVS 137
BLAST of HIT domain-containing protein vs. Planmine SMEST
Match: SMESG000013683.1 (SMESG000013683.1) HSP 1 Score: 261.922 bits (668), Expect = 1.868e-90 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 3 Query: 102 MIGKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDKYSPDSYWFKTIDWALDYLEKRP 527 MIGKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFHSINHIHLHLISPIPTTRKCFCFDKYSPDSYWFKTIDWALDYLEKRP Sbjct: 1 MIGKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFHSINHIHLHLISPIPTTRKCFCFDKYSPDSYWFKTIDWALDYLEKRP 142
BLAST of HIT domain-containing protein vs. Planmine SMEST
Match: SMESG000025046.1 (SMESG000025046.1) HSP 1 Score: 67.3958 bits (163), Expect = 2.915e-14 Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHR-NNIKFLNRSDIPIIKEMLKQGLNCLEKNGADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK--YSPDSYWFKTIDWALDYLEKR 524 CIFC + N K + SI +++++ ++FEDI+PA+ HYL IP H ++ K L +S +I M++ +K +I R GFHW PF + + I + ++ Y P+S+WF T LD L+ + Sbjct: 8 CIFCSIANKKAE-SSILYEDDDFLLFEDIKPAAKIHYLCIPKKHLVSSAKELTKSHENLISSMIEVS----KKFIGEIPSVRFGFHWPPF---TLVKHLHMHIISPVEELSLLNRIIYRPNSWWFVTDTALLDLLKNK 137
BLAST of HIT domain-containing protein vs. Planmine SMEST
Match: SMESG000025046.1 (SMESG000025046.1) HSP 1 Score: 64.6994 bits (156), Expect = 2.299e-13 Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = 3 Query: 120 CIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHRNNIKFLNRSDIPIIKEMLKQGLNCLEKNG-ADINDCRIGFHWSPFXXXXXXXXXXXXXXXTTRKCFCFDK--YSPDSYWFKTIDWALDYLEKR 524 CIFC + N K + SI +++++ ++FEDI+PA+ HYL IP H + KE+ K N + K +I R GFHW PF + + I + ++ Y P+S+WF T LD L+ + Sbjct: 8 CIFCSIANKKAE-SSILYEDDDFLLFEDIKPAAKIHYLCIPKKHL----------VSSAKELTKSHENLISKKFIGEIPSVRFGFHWPPF---TLVKHLHMHIISPVEELSLLNRIIYRPNSWWFVTDTALLDLLKNK 131 The following BLAST results are available for this feature:
BLAST of HIT domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 1
BLAST of HIT domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 3
BLAST of HIT domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of HIT domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of HIT domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of HIT domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of HIT domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of HIT domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of HIT domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of HIT domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of HIT domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of HIT domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of HIT domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of HIT domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010928 ID=SMED30010928|Name=HIT domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=626bpback to top protein sequence of SMED30010928-orf-1 >SMED30010928-orf-1 ID=SMED30010928-orf-1|Name=SMED30010928-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=143bp MIGKSSCIFCDVVNGKHQRDSIRFQNENVVVFEDIRPASDYHYLAIPAVHback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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