KH domain-containing protein

Overview


Name	KH domain-containing protein
Smed ID	SMED30010781
Length (bp)	1288

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of KH domain-containing protein (SMED30010781) t-SNE clustered cells

Violin plots show distribution of expression levels for KH domain-containing protein (SMED30010781) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of KH domain-containing protein (SMED30010781) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for KH domain-containing protein (SMED30010781) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30010781

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30010781	SMESG000068399.1	SmedASXL_013718	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
nervous system	SMED30010781	SMESG000068399.1	dd_Smed_v4_13063_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30010781	SMESG000068399.1	dd_Smed_v4_13063_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30010781	SMESG000068399.1	dd_Smed_v4_13063_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30010781	SMESG000068399.1	dd_Smed_v4_13063_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30010781	SMESG000068399.1	dd_Smed_v4_13063_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30010781	SMESG000068402.1 SMESG000068399.1 SMESG000020950.1	Contig36089	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30010781	SMESG000068402.1 SMESG000068399.1 SMESG000020950.1	Contig36089	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
head region	SMED30010781	SMESG000068399.1	dd_Smed_v6_13063_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 209.92 bits (533), Expect = 4.717e-64
Identity = 114/208 (54.81%), Postives = 154/208 (74.04%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS T
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKSPT 213

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 210.305 bits (534), Expect = 5.903e-64
Identity = 114/208 (54.81%), Postives = 154/208 (74.04%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS T
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKSPT 213

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 209.534 bits (532), Expect = 9.288e-64
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 209.149 bits (531), Expect = 1.152e-63
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 194.897 bits (494), Expect = 1.425e-58
Identity = 97/183 (53.01%), Postives = 132/183 (72.13%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENA-LPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F HL  + ++EIN+VR  LF          S E+A LP  +G+     EKV+VP  E+P+YNF+GRILGPRG+TAKQLEQE  CK+M+RG+GS+R+K+KE+  RGKPNWEHL+++LH+ I  ED ENRA +KL  A++ + K +   +  P+GEDD+K++QLMELAIINGTYR  + +S
Sbjct:   45 PNV-FHHLERLADEEINKVRVVLFQCEF------SKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYRSGTDQS 217

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 195.667 bits (496), Expect = 6.625e-58
Identity = 97/183 (53.01%), Postives = 132/183 (72.13%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENA-LPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F HL  + ++EIN+VR  LF          S E+A LP  +G+     EKV+VP  E+P+YNF+GRILGPRG+TAKQLEQE  CK+M+RG+GS+R+K+KE+  RGKPNWEHL+++LH+ I  ED ENRA +KL  A++ + K +   +  P+GEDD+K++QLMELAIINGTYR  + +S
Sbjct:   45 PNV-FHHLERLADEEINKVRVVLFQCE------FSKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYRSGTDQS 217

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 194.897 bits (494), Expect = 3.015e-57
Identity = 97/183 (53.01%), Postives = 132/183 (72.13%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENA-LPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F HL  + ++EIN+VR  LF          S E+A LP  +G+     EKV+VP  E+P+YNF+GRILGPRG+TAKQLEQE  CK+M+RG+GS+R+K+KE+  RGKPNWEHL+++LH+ I  ED ENRA +KL  A++ + K +   +  P+GEDD+K++QLMELAIINGTYR  + +S
Sbjct:   87 PNV-FHHLERLADEEINKVRVVLFQCE------FSKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYRSGTDQS 259

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 195.667 bits (496), Expect = 3.399e-57
Identity = 97/183 (53.01%), Postives = 132/183 (72.13%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENA-LPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F HL  + ++EIN+VR  LF          S E+A LP  +G+     EKV+VP  E+P+YNF+GRILGPRG+TAKQLEQE  CK+M+RG+GS+R+K+KE+  RGKPNWEHL+++LH+ I  ED ENRA +KL  A++ + K +   +  P+GEDD+K++QLMELAIINGTYR  + +S
Sbjct:  117 PNV-FHHLERLADEEINKVRVVLFQCEF------SKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYRSGTDQS 289

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: gld-1 (Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339])

HSP 1 Score: 194.512 bits (493), Expect = 7.326e-57
Identity = 109/218 (50.00%), Postives = 147/218 (67.43%), Query Frame = 2

Query:   86 MDKKQSSPDVTASIFEGHWFPKATPEYXXXXXXXXXXXXCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYR 739
            MDK   SP  T  I       +AT EYL +L+++K+ L  F P+  F ++  +L+ EI RVR  LF       QT+     LP P G+ +++ EK+YVP +E P+YNF+GRILGPRG+TAKQLEQ+  CK+M+RGKGS+R+K KE   RGK NWEHL D LH+ +  ED ENR  IKL+ AL+ ++K +   I  P+G D++K++QLMELAIINGTYR
Sbjct:  128 MDKSLFSPTATEPIEV-----EATVEYLADLVKEKKHLTLF-PHM-FSNVERLLDDEIGRVRVALF-------QTEFPRVELPEPAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLL---IPAPEGTDELKRKQLMELAIINGTYR 328

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0084178)

HSP 1 Score: 225.328 bits (573), Expect = 1.422e-69
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F H+  +L++EI RVR  LF ING   +  +    LP P+G  VT+ EKVYVPV E+P++NF+GRILGPRG+TAKQLEQE  CK+M+RGKGS+R+K+KED  RGKPNWEHL+D LH+ ITVED ENRA +KL  A+  ++K +   +   +GED++KKRQLMELAIINGTYRDT+ KS
Sbjct:   93 PNV-FTHVERLLDEEIARVRASLFQINGVKKEPLT----LPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0100514)

HSP 1 Score: 225.328 bits (573), Expect = 1.533e-69
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F H+  +L++EI RVR  LF ING   +  +    LP P+G  VT+ EKVYVPV E+P++NF+GRILGPRG+TAKQLEQE  CK+M+RGKGS+R+K+KED  RGKPNWEHL+D LH+ ITVED ENRA +KL  A+  ++K +   +   +GED++KKRQLMELAIINGTYRDT+ KS
Sbjct:   93 PNV-FTHVERLLDEEIARVRASLFQINGVKKEPLT----LPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0084177)

HSP 1 Score: 225.328 bits (573), Expect = 3.205e-69
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F H+  +L++EI RVR  LF ING   +  +    LP P+G  VT+ EKVYVPV E+P++NF+GRILGPRG+TAKQLEQE  CK+M+RGKGS+R+K+KED  RGKPNWEHL+D LH+ ITVED ENRA +KL  A+  ++K +   +   +GED++KKRQLMELAIINGTYRDT+ KS
Sbjct:   93 PNV-FTHVERLLDEEIARVRASLFQINGVKKEPLT----LPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0301401)

HSP 1 Score: 225.328 bits (573), Expect = 3.205e-69
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F H+  +L++EI RVR  LF ING   +  +    LP P+G  VT+ EKVYVPV E+P++NF+GRILGPRG+TAKQLEQE  CK+M+RGKGS+R+K+KED  RGKPNWEHL+D LH+ ITVED ENRA +KL  A+  ++K +   +   +GED++KKRQLMELAIINGTYRDT+ KS
Sbjct:   93 PNV-FTHVERLLDEEIARVRASLFQINGVKKEPLT----LPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0301402)

HSP 1 Score: 225.328 bits (573), Expect = 3.290e-69
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F H+  +L++EI RVR  LF ING   +  +    LP P+G  VT+ EKVYVPV E+P++NF+GRILGPRG+TAKQLEQE  CK+M+RGKGS+R+K+KED  RGKPNWEHL+D LH+ ITVED ENRA +KL  A+  ++K +   +   +GED++KKRQLMELAIINGTYRDT+ KS
Sbjct:   93 PNV-FTHVERLLDEEIARVRASLFQINGVKKEPLT----LPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qki2 (QKI, KH domain containing, RNA binding 2 [Source:NCBI gene;Acc:393815])

HSP 1 Score: 207.994 bits (528), Expect = 1.681e-63
Identity = 112/206 (54.37%), Postives = 151/206 (73.30%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI RVR+ +++ +  +G T    + LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEIGRVRKDMYN-DTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qki2 (QKI, KH domain containing, RNA binding 2 [Source:NCBI gene;Acc:393815])

HSP 1 Score: 207.994 bits (528), Expect = 1.997e-63
Identity = 112/206 (54.37%), Postives = 151/206 (73.30%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI RVR+ +++ +  +G T    + LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEIGRVRKDMYN-DTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qki2 (QKI, KH domain containing, RNA binding 2 [Source:NCBI gene;Acc:393815])

HSP 1 Score: 205.297 bits (521), Expect = 1.141e-62
Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 2

Query:  212 PNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PNF   F HL  +L++EI RVR+ +++ +  +G T    + LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PNFCGIFNHLERLLDEEIGRVRKDMYN-DTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 190

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54])

HSP 1 Score: 202.986 bits (515), Expect = 1.934e-61
Identity = 113/206 (54.85%), Postives = 149/206 (72.33%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+   + LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++  E           GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSSELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEAE-----------GEDSLKKMQLMELAILNGTYRDANIKS 203

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54])

HSP 1 Score: 202.986 bits (515), Expect = 2.985e-61
Identity = 113/206 (54.85%), Postives = 149/206 (72.33%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+   + LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++  E           GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSSELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEAE-----------GEDSLKKMQLMELAILNGTYRDANIKS 203

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 209.534 bits (532), Expect = 6.515e-64
Identity = 114/208 (54.81%), Postives = 157/208 (75.48%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++  +NG++ + ++ E  LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSE--LPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANLKS 212

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 199.519 bits (506), Expect = 2.322e-59
Identity = 114/223 (51.12%), Postives = 157/223 (70.40%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKE---------------KEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++  +NG++ + ++ E  LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+               KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   35 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSE--LPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKAVTNILECSILALNKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANLKS 251

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 199.519 bits (506), Expect = 2.402e-59
Identity = 114/223 (51.12%), Postives = 157/223 (70.40%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKE---------------KEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++  +NG++ + ++ E  LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+               KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   35 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSE--LPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKAVTNILECSILALNKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANLKS 251

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 173.711 bits (439), Expect = 2.395e-50
Identity = 94/179 (52.51%), Postives = 134/179 (74.86%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKM 670
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++  +NG++ + ++ E  LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   + +
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSE--LPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAVSI 186

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: pdc (phosducin [Source:Xenbase;Acc:XB-GENE-983832])

HSP 1 Score: 108.997 bits (271), Expect = 9.186e-26
Identity = 61/173 (35.26%), Postives = 102/173 (58.96%), Query Frame = 2

Query:  221 NFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELR--GKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGT 733
            +F H +++L KEI R+++      G   +    +  L     + + L+E++ +PV   P +NF+G+ILGP+G T K+L++E   K+ + GKGS+R+K KE+ELR  G P + HLN  LH+ I V      +  ++  A++ ++KF+     +PD  DDI + Q MEL+ +NG 
Sbjct:   47 SFTHAMSLLGKEIERLKK------GGDAKKDEEDTYLDLFSHKNMKLKERILIPVKLYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYSHLNMDLHVFIEVFGPPCESYTRMAHAMEEVKKFL-----VPDMMDDICQEQFMELSYLNGA 208

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Qk (quaking [Source:MGI Symbol;Acc:MGI:97837])

HSP 1 Score: 209.534 bits (532), Expect = 6.376e-64
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Qk (quaking [Source:MGI Symbol;Acc:MGI:97837])

HSP 1 Score: 209.149 bits (531), Expect = 7.908e-64
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Qk (quaking [Source:MGI Symbol;Acc:MGI:97837])

HSP 1 Score: 209.149 bits (531), Expect = 1.286e-63
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Khdrbs2 (KH domain containing, RNA binding, signal transduction associated 2 [Source:MGI Symbol;Acc:MGI:2159649])

HSP 1 Score: 108.612 bits (270), Expect = 6.598e-26
Identity = 63/174 (36.21%), Postives = 104/174 (59.77%), Query Frame = 2

Query:  221 NFRHLLNILEKEINRVREKLFHINGTSGQTKSIENA-LPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELR--GKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGT 733
            +F H   +L +EI +         G+ G+ +  E   L     + + L E+V +PV + P +NF+G++LGPRG + K+L++E   K+ I GKGS+R+K KE+ELR  G+  + HL+D+LH+ I V      A  ++  AL+ I+KF+     +PD  D+I++ QL EL+ +NG+
Sbjct:   20 SFVHASRLLAEEIEK-------FQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFL-----VPDYNDEIRQEQLRELSYLNGS 181

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|O01367|HOW_DROME (Protein held out wings OS=Drosophila melanogaster OX=7227 GN=how PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.212e-68
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 2

Query:  212 PNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PN  F H+  +L++EI RVR  LF ING   +  +    LP P+G  VT+ EKVYVPV E+P++NF+GRILGPRG+TAKQLEQE  CK+M+RGKGS+R+K+KED  RGKPNWEHL+D LH+ ITVED ENRA +KL  A+  ++K +   +   +GED++KKRQLMELAIINGTYRDT+ KS
Sbjct:   93 PNV-FTHVERLLDEEIARVRASLFQINGVKKEPLT----LPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q6IRN2|QKIB_XENLA (Protein quaking-B OS=Xenopus laevis OX=8355 GN=qki-b PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.430e-63
Identity = 114/208 (54.81%), Postives = 157/208 (75.48%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++  +NG++ + ++  N LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRT--NELPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANLKS 212

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5W9D5|QKI_PIG (Protein quaking OS=Sus scrofa OX=9823 GN=QKI PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 8.993e-63
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9QYS9|QKI_MOUSE (Protein quaking OS=Mus musculus OX=10090 GN=Qki PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 8.993e-63
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96PU8|QKI_HUMAN (Protein quaking OS=Homo sapiens OX=9606 GN=QKI PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 8.993e-63
Identity = 113/206 (54.85%), Postives = 153/206 (74.27%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+     LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: G7Y7G8 (Protein quaking (Fragment) OS=Clonorchis sinensis OX=79923 GN=CLF_102193 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.788e-81
Identity = 143/250 (57.20%), Postives = 190/250 (76.00%), Query Frame = 2

Query:   20 MIII*MQNK*RYKLKKIISL*KMDKKQSSPDVTASIFEGHWFPKATPEYXXXXXXXXXXXXCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPN 769
            ++I  ++ + R  L   + +  +D+     D   +  +     KATPEYLQ+LL+DK++LQ F PN  F HL  ILEKEINRVREKLFH+N +  +T   EN LP P G   TLQEKV+VPV ENPNYNF+GR+LGPRGLTAKQLEQ+L+CK+M+RGKGSLR+K+KED  RGKPNWEHL+++LH+ ++VEDYENRA +KL+ A + I  F+EQG++ PDGED++KKRQL+ELAIINGTYR +++K+  P+
Sbjct:   24 LVIFKVRIRYRGALSAGVGIMTLDEAAMKKDPEQANLDSVLVSKATPEYLQDLLKDKRQLQNF-PNM-FIHLEIILEKEINRVREKLFHLNESFRKT---ENELPEPSGVITTLQEKVFVPVKENPNYNFVGRLLGPRGLTAKQLEQDLECKIMVRGKGSLRDKKKEDMNRGKPNWEHLDEELHVLVSVEDYENRAAVKLRRATETIRNFLEQGVRTPDGEDELKKRQLIELAIINGTYRTSTQKNGFPD 268

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A1I8HVJ9 (KH domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 1.918e-76
Identity = 130/204 (63.73%), Postives = 162/204 (79.41%), Query Frame = 2

Query:  143 FPKATPEYXXXXXXXXXXXXCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKK 754
             PK TPEYLQELL+DK+ LQ   PN  F HL  ILE EI RVR +LFH NG     K   + LP  +G  VT+QEKV++PV +NP+YNF+GR+LGPRG+TAKQLE +L CK+M+RGKGS+R+K+KED+ RGKPNWEHL ++LH+ I VED++NRA +K K A + I+ F+EQ +KMPDGEDD+KK+QLMELAIINGTYRDTSKK
Sbjct:   58 LPKITPEYLQELLKDKKNLQSL-PNL-FNHLDKILETEITRVRSQLFHFNGA----KRASDDLPEGEGPIVTVQEKVFIPVKDNPSYNFVGRLLGPRGMTAKQLETDLDCKIMVRGKGSMRDKKKEDQNRGKPNWEHLAEELHVLICVEDHQNRAEMKAKRAAEEIKAFLEQAVKMPDGEDDLKKKQLMELAIINGTYRDTSKK 255

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A1I8GFL6 (KH domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 9.575e-76
Identity = 130/204 (63.73%), Postives = 162/204 (79.41%), Query Frame = 2

Query:  143 FPKATPEYXXXXXXXXXXXXCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKK 754
             PK TPEYLQELL+DK+ LQ   PN  F HL  ILE EI RVR +LFH NG     K   + LP  +G  VT+QEKV++PV +NP+YNF+GR+LGPRG+TAKQLE +L CK+M+RGKGS+R+K+KED+ RGKPNWEHL ++LH+ I VED++NRA +K K A + I+ F+EQ +KMPDGEDD+KK+QLMELAIINGTYRDTSKK
Sbjct:   58 LPKITPEYLQELLKDKKNLQSL-PNL-FNHLDKILETEITRVRSQLFHFNGA----KRASDDLPEGEGPIVTVQEKVFIPVKDNPSYNFVGRLLGPRGMTAKQLETDLDCKIMVRGKGSMRDKKKEDQNRGKPNWEHLAEELHVLICVEDHQNRAEMKAKRAAEEIKAFLEQAVKMPDGEDDLKKKQLMELAIINGTYRDTSKK 255

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A068WQP5 (KH domain-containing protein OS=Echinococcus granulosus OX=6210 GN=EgrG_000055900 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 2.309e-73
Identity = 127/205 (61.95%), Postives = 164/205 (80.00%), Query Frame = 2

Query:  128 FEGHWFPKATPEYXXXXXXXXXXXXCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRD 742
            F      KATPEYLQELL DK++LQ   PN +F+H+  ILEKEI +VRE+LFH NG+   + +    LP P G+ VTLQ KVY+PV ENP YNF+GR+LGPRGLTAKQ+EQ+L CK+M+RGKGS+R+K KED+ RGKPNWEHL + LH+ ++VEDYE+RA ++L+ A++AI  F+EQG++ P+G DD+KK+QLMELAIINGTYRD
Sbjct:   26 FNSSLLQKATPEYLQELLMDKKQLQSM-PN-SFKHVELILEKEIAQVRERLFHKNGSIQMSNT---DLPDPSGQIVTLQRKVYIPVKENPTYNFVGRLLGPRGLTAKQMEQDLGCKIMVRGKGSMRDKRKEDQNRGKPNWEHLQEDLHVLVSVEDYESRAELRLQRAVNAITIFLEQGLRTPEGADDVKKQQLMELAIINGTYRD 225

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A5K4EVS6 (Kh-domain rna binding protein-related OS=Schistosoma mansoni OX=6183 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 3.308e-73
Identity = 110/168 (65.48%), Postives = 140/168 (83.33%), Query Frame = 2

Query:  254 EINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            EI RVR+KLFH+N +    K  EN LP P G  V+LQEKV+VPV ENPNYNF+GR+LGPRGLTAKQLEQ+L+CK+M+RGKGSLR+K KED  +GKPNWEHL+++LH+ ++VED+E+RA IKL+ A + I  F+EQG++ PDGED +KKRQLMELAIINGTYR  +++S
Sbjct:    7 EITRVRQKLFHLNES---VKKTENELPVPSGNIVSLQEKVFVPVKENPNYNFVGRLLGPRGLTAKQLEQDLECKIMVRGKGSLRDKRKEDSNKGKPNWEHLDEELHVLVSVEDFESRAAIKLRRASETIRAFLEQGVRTPDGEDQVKKRQLMELAIINGTYRAVNQRS 171

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551])

HSP 1 Score: 207.608 bits (527), Expect = 2.232e-63
Identity = 112/206 (54.37%), Postives = 151/206 (73.30%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI RVR+ +++ +  +G T    + LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEIGRVRKDMYN-DTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551])

HSP 1 Score: 207.223 bits (526), Expect = 3.211e-63
Identity = 112/206 (54.37%), Postives = 151/206 (73.30%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI RVR+ +++ +  +G T    + LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEIGRVRKDMYN-DTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551])

HSP 1 Score: 207.608 bits (527), Expect = 4.493e-63
Identity = 112/206 (54.37%), Postives = 151/206 (73.30%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
            PK TP+YL +L+ DK+ +    PNF   F HL  +L++EI RVR+ +++ +  +G T    + LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE++ RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ ++K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:   11 PKPTPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEIGRVRKDMYN-DTLNGSTDKRTSELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54])

HSP 1 Score: 203.756 bits (517), Expect = 7.752e-62
Identity = 112/212 (52.83%), Postives = 151/212 (71.23%), Query Frame = 2

Query:  128 FEGHWFPKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKS 757
             E    PK +P+YL +L+ DK+ +    PNF   F HL  +L++EI+RVR+ +++ +  +G T+   + LP   G  V LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+K    RGKPNWEHLN+ LH+ ITVED +NRA IKLK A++ + K +   +   +GED +KK QLMELAI+NGTYRD + KS
Sbjct:    5 MEAKEKPKPSPDYLMQLMNDKKLMSSL-PNFCGIFNHLERLLDEEISRVRKDMYN-DTLNGSTEKRSSELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKVRANRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qkia (QKI, KH domain containing, RNA binding a [Source:NCBI gene;Acc:30471])

HSP 1 Score: 188.348 bits (477), Expect = 1.302e-55
Identity = 106/231 (45.89%), Postives = 147/231 (63.64%), Query Frame = 2

Query:  224 FRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPNXXXXXXXXXXXVDGKPANFSYSNSSILPNYVSFNNMLPQTNHDSSLLNI 916
            F HL  +L++EINRVR+ +++ +  SG        LP   G  V LQEK++VP      YNF+GRILGPRGLTAKQLE E  CK+M+RGK S+R+K+KE++ RGKPNWEHLN+ LH+ ITVED + RA IK++ A++ ++K +   +   +GED++KK QLMELAI+NGTYRDT+ K  TPN        +    G P   +     +LP       + P T   + ++NI
Sbjct:   39 FTHLERLLDEEINRVRKDMYN-DSVSGLVDKHPMELPDAHGPIVHLQEKLFVP------YNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQARAEIKMRRAVEEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDTNIK--TPNLAFSLAAAAAAAQG-PRLIAAPTGQVLPPAA----LRPPTPAGAPIMNI 252

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: KHDRBS3 (KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117])

HSP 1 Score: 102.449 bits (254), Expect = 3.308e-25
Identity = 53/128 (41.41%), Postives = 89/128 (69.53%), Query Frame = 2

Query:  353 VTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELR--GKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIING 730
            V L E+V +PV ++P +NFIG++LGPRG + K+L++E   KL I GKGS+R+++KE++LR  G+  + HLN+ LH+ I V    ++A  ++  ALD ++K++     +PD  D+I+++QL EL+ + G
Sbjct:   35 VKLIERVIIPVRQHPKFNFIGKLLGPRGNSLKRLKEETGTKLSILGKGSMRDRDKEEDLRKSGEAKYAHLNEDLHVLIEVFAPPSQAYRRMGHALDEVKKYL-----VPDYNDEIRQQQLRELSFLKG 157

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: khdrbs2 (KH domain containing, RNA binding, signal transduction associated 2 [Source:NCBI gene;Acc:768147])

HSP 1 Score: 96.2857 bits (238), Expect = 1.982e-22
Identity = 47/128 (36.72%), Postives = 85/128 (66.41%), Query Frame = 2

Query:  353 VTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELR--GKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIING 730
            + L E+V +P  ++P +NF+G++LGPRG + K++++E   K+ I GKGS+R+K  E+E+R  G+  + HL+++LH+ I V    + A  ++  ALD ++K++     +PD  D+I++ QL EL+ + G
Sbjct:   35 MKLAERVIIPAKQHPKFNFVGKLLGPRGNSLKRMQEETGTKMSILGKGSMRDKALEEEMRKSGENKYAHLSEELHVLIEVFAPPSEAYSRMGHALDEVKKYL-----VPDYNDEIRQEQLRELSFLKG 157

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: sf1 (splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492])

HSP 1 Score: 98.5969 bits (244), Expect = 2.244e-22
Identity = 53/138 (38.41%), Postives = 88/138 (63.77%), Query Frame = 2

Query:  359 LQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPN--WEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTP 766
            + E++ +P DE+P+ NFIG I+GPRG T K++E+E   K+MIRGKGS+    KE ++  KP       ++ LH  +T    +N     ++ A+D I+  ++QGI++P+G++++++ QL ELA +NGT RD   +   P
Sbjct:  206 ISERIMIPQDEHPDINFIGLIIGPRGNTLKKIEKECNAKIMIRGKGSV----KEGKIGHKPGQPLPGEDEPLHALVTASTQDN-----VRKAVDQIKNILKQGIEVPEGQNELRRMQLRELARLNGTLRDDESRVLRP 334

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: khdrbs1a (KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25])

HSP 1 Score: 95.1301 bits (235), Expect = 8.342e-22
Identity = 49/127 (38.58%), Postives = 80/127 (62.99%), Query Frame = 2

Query:  359 LQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELR--GKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGT 733
            L EKV +P  ++P +NF+G++LGP+G T K+L+ E   ++ I GKG ++++ KE+ELR  G+  + HLN++LH+ I V      A  ++  AL+ ++KF       PD  D+I + QLME+  +NG 
Sbjct:   61 LAEKVLIPAKQHPKFNFVGKLLGPQGNTLKRLQVETGTRMAIMGKGCMKDRAKEEELRNSGEAKYVHLNEELHVLIEVYAPLPEAYSRMGHALEEVKKFFN-----PDYNDEICQEQLMEMTYLNGV 182

[Close]

BLAST of KH domain-containing protein vs. Ensembl Yeast
Match: MSL5 (Component of commitment complex; which defines first step in splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000004106])

HSP 1 Score: 94.3597 bits (233), Expect = 1.889e-21
Identity = 45/131 (34.35%), Postives = 82/131 (62.60%), Query Frame = 2

Query:  359 LQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSK 751
             Q+K Y+PVD+ P+ NF+G +LGPRG T ++L+++  CK+ IRG+GS++  +   +L   P   +  D LH  + + D E+    K++  +   +  + + +  P+G++D+K+ QL ELA +NGT R+ ++
Sbjct:  148 FQDKYYIPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNFEDPLHC-LIIADSED----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTLREDNR 271

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO30297 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T170])

HSP 1 Score: 167.548 bits (423), Expect = 3.839e-50
Identity = 81/178 (45.51%), Postives = 125/178 (70.22%), Query Frame = 2

Query:  224 FRHLLNILEKEINRVREKLFH--INGTSGQTKSIEN-ALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTS 748
            F H   +L++EIN+VR +LFH   NG    T SI + +LP P G  V L EKVY PV E P +NF+GR++GPRG+T +++E    CKL++RGKGS+++K+ E+E RG+PN+EHL++ LH+ I+ ED E R   +L+ A++ ++  +     + +GED+IKK+QL +LA++NGT R++ 
Sbjct:    5 FLHAERLLDQEINKVRNELFHGATNGVDNGTTSIADLSLPAPSGPRVKLVEKVYAPVKEFPKFNFVGRVIGPRGMTLREIESTTGCKLLVRGKGSMKDKKLEEEKRGQPNYEHLDEDLHVLISCEDTEERCHTRLEKAVERVQSLLRP---VEEGEDEIKKKQLKDLALLNGTLRESG 179

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO44127 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWI4])

HSP 1 Score: 107.842 bits (268), Expect = 8.215e-28
Identity = 54/127 (42.52%), Postives = 87/127 (68.50%), Query Frame = 2

Query:  353 VTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGK--PNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIIN 727
            V L EKV++PV ++P +NF+G++LGPRG T K+L+     K+ I GKGS+R+KEKE+ELR    P + HL ++LH+ I VE    +A  +L +A++ I+K++     +P+  D+I + Q+ E+AI+N
Sbjct:   47 VKLSEKVFIPVKDHPKFNFVGKLLGPRGNTFKRLQNSTGTKMSILGKGSMRDKEKEEELRATEDPKYAHLGEELHVLIEVEAPPGQAHARLGIAIEEIKKYL-----IPEMNDEIHQEQMREMAILN 168

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO28641 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5W9])

HSP 1 Score: 99.3673 bits (246), Expect = 5.178e-25
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 2

Query:  254 EINRVREKLFH--INGTSGQTKSIEN-ALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKE 514
            EIN+VR +LFH   NG    T SI + +LP P G  V L EKVY PV E P +NF+GR++GPRG+T +++E    CKL++RGKGS+++K+
Sbjct:   54 EINKVRNELFHGATNGVDNGTTSIADLSLPAPSGPRVKLVEKVYAPVKEFPKFNFVGRVIGPRGMTLREIESTTGCKLLVRGKGSMKDKK 143

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO26937 (pep supercontig:ASM20922v1:NEMVEscaffold_5067:6022:6774:-1 gene:NEMVEDRAFT_v1g152583 transcript:EDO26937 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 67.3958 bits (163), Expect = 3.153e-14
Identity = 31/75 (41.33%), Postives = 54/75 (72.00%), Query Frame = 2

Query:  521 DELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDT 745
            +E RG+PN+EHL++ LH+ I+ ED E R   +L+ A++ ++  +     + +GED+IKK+QL +LA++NGT R++
Sbjct:    2 EEKRGQPNYEHLDEDLHVLISCEDTEERCHTRLEKAVERVQSLLR---PVEEGEDEIKKKQLKDLALLNGTLRES 73

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO45484 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSV9])

HSP 1 Score: 66.2402 bits (160), Expect = 2.612e-12
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 2

Query:  353 VTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRN 508
            + +Q+KV +P DENP  NFIG ++GPRG T K +E+E   K+MIRGKGS+++
Sbjct:  178 IKIQDKVMIPQDENPEVNFIGLLIGPRGNTLKNMEKETNAKIMIRGKGSIKD 229

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000045137.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 202.601 bits (514), Expect = 2.054e-61
Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK+ P+YL +L+ D++ +    PNF+  F HL  +L++EI RVR+ +++  +NG     + +E  LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE+  RGKPNWEHLN+ LH+ ITVED  NRA IKL+ A++ ++K +   +   +GED++KK QLMELAI+NGTYRD + K+ T
Sbjct:   11 PKSNPDYLMQLMNDRKVMSSL-PNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEE-LPEAIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDANVKTPT 215

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000031315.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 202.216 bits (513), Expect = 2.789e-61
Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK+ P+YL +L+ D++ +    PNF+  F HL  +L++EI RVR+ +++  +NG     + +E  LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE+  RGKPNWEHLN+ LH+ ITVED  NRA IKL+ A++ ++K +   +   +GED++KK QLMELAI+NGTYRD + K+ T
Sbjct:   11 PKSNPDYLMQLMNDRKVMSSL-PNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEE-LPEAIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDANVKTPT 215

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000044982.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 202.216 bits (513), Expect = 3.330e-61
Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK+ P+YL +L+ D++ +    PNF+  F HL  +L++EI RVR+ +++  +NG     + +E  LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE+  RGKPNWEHLN+ LH+ ITVED  NRA IKL+ A++ ++K +   +   +GED++KK QLMELAI+NGTYRD + K+ T
Sbjct:   11 PKSNPDYLMQLMNDRKVMSSL-PNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEE-LPEAIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDANVKTPT 215

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000033069.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 202.216 bits (513), Expect = 4.546e-61
Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK+ P+YL +L+ D++ +    PNF+  F HL  +L++EI RVR+ +++  +NG     + +E  LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE+  RGKPNWEHLN+ LH+ ITVED  NRA IKL+ A++ ++K +   +   +GED++KK QLMELAI+NGTYRD + K+ T
Sbjct:   11 PKSNPDYLMQLMNDRKVMSSL-PNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEE-LPEAIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDANVKTPT 215

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000027064.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 202.216 bits (513), Expect = 6.573e-61
Identity = 110/210 (52.38%), Postives = 153/210 (72.86%), Query Frame = 2

Query:  146 PKATPEYXXXXXXXXXXXXCFQPNFN--FRHLLNILEKEINRVREKLFH--INGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQT 763
            PK+ P+YL +L+ D++ +    PNF+  F HL  +L++EI RVR+ +++  +NG     + +E  LP   G    LQEK+YVPV E P++NF+GRILGPRGLTAKQLE E  CK+M+RGKGS+R+K+KE+  RGKPNWEHLN+ LH+ ITVED  NRA IKL+ A++ ++K +   +   +GED++KK QLMELAI+NGTYRD + K+ T
Sbjct:   11 PKSNPDYLMQLMNDRKVMSSL-PNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEE-LPEAIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDANVKTPT 215

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000068399.1 (SMESG000068399.1)

HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0
Identity = 364/366 (99.45%), Postives = 364/366 (99.45%), Query Frame = 2

Query:   86 MDKKQSSPDVTASIFEGHWFPKATPEYXXXXXXXXXXXXCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPNXXXXXXXXXXXVDGKPANFSYSNSSILPNYVSFNNMLPQTNHDSSLLNIXXXXXXXXXXXXXXXXXXXXXXILDPNLMNILTNYRSSTLDSMLPITQFAGLYNLTDVNIGPNNLLGPIRIRNMSSMMRPHPYQMMGNI 1183
            MDKKQSSPDVTASIFEGHWFPKATPEYLQELLQDKQKLQCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLK ALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPNSKSETKT STTVDGKPANFSYSNSSILPNYVSFNNMLPQTNHDSSLLNILPSVHSSNLPNNLNSSYNSMLPILDPNLMNILTNYRSSTLDSMLPITQFAGLYNLTDVNIGPNNLLGPIRIRNMSSMMRPHPYQMMGNI
Sbjct:    1 MDKKQSSPDVTASIFEGHWFPKATPEYLQELLQDKQKLQCFQPNFNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKWALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPNSKSETKTNSTTVDGKPANFSYSNSSILPNYVSFNNMLPQTNHDSSLLNILPSVHSSNLPNNLNSSYNSMLPILDPNLMNILTNYRSSTLDSMLPITQFAGLYNLTDVNIGPNNLLGPIRIRNMSSMMRPHPYQMMGNI 366

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000080790.1 (SMESG000080790.1)

HSP 1 Score: 174.096 bits (440), Expect = 1.597e-50
Identity = 86/174 (49.43%), Postives = 118/174 (67.82%), Query Frame = 2

Query:  218 FNFRHLLNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYR 739
             NF+H  N+L+KEI  V+E  F I                 +G  V+ QEK+++PV ENPNYNF+GRILGPRG TAKQLEQ+L CK+MIRG+GS+R++ KE++ R KPNWEHLN+ LH+ I + D ENR   K+    +AI  FI++G+  P+  D +K+ QLMEL+I+N + R
Sbjct:   33 INFKHATNLLDKEIALVKEN-FSIR----------------EGRIVSKQEKIFLPVKENPNYNFVGRILGPRGYTAKQLEQKLDCKIMIRGRGSMRDQNKEEQNRNKPNWEHLNEDLHVLINISDCENRVDEKMNTIKEAISSFIQEGLNTPESLDTLKQMQLMELSILNESDR 189

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000069949.1 (SMESG000069949.1)

HSP 1 Score: 131.339 bits (329), Expect = 7.593e-35
Identity = 75/177 (42.37%), Postives = 106/177 (59.89%), Query Frame = 2

Query:  242 ILEKEINRVREKLFHINGTSGQTKSIENALP-CPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPN 769
            +LE+EI   R  LFH    + Q++    +LP     E V + +K+ VPV  NP YNFIGRILGP GLT KQ+E+E  CK+ IRG+GS+RN +KE   + K N  +  D LH+ ITV   E+ A  + + A + I+   ++ +     ED+ K+ QLME AI+ GTYR+ S K+   N
Sbjct:   57 LLEREIMISRHILFHQKYVTKQSRE---SLPQVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRN 230

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000031862.1 (SMESG000031862.1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.778e-22
Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 2

Query:  359 LQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHL-----NDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDT 745
             +EKV++P D+ P+ N IG I+GPRGLT K LE+E   K++IRGKGS+ N        GK N  ++     ++ LH  IT   +    V K   A D I K I++GI  P+ E+D++K Q+ +LAI+NGTYR+T
Sbjct:  142 FEEKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHN--------GKVNVNNVPLPGEDECLHAYIT--SFSKECVEK---ATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRET 262

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000031867.1 (SMESG000031867.1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.379e-20
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 2

Query:  353 VTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHL-----NDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDT 745
              ++EKV++P D+ P+ NF G I+GPRG+T K LE+E   K+++RGKGS +         GK N         ++ LH  IT    E+     +  A++ I+K I+ GI+ P+ ++D++K Q+ +LAI+NGTYR+T
Sbjct:  281 ARIEEKVFIPQDDYPDINFAGLIIGPRGMTQKDLEKETGTKILLRGKGSAKP--------GKLNGGSAPLPGEDEPLHAYITSMSRES-----VDRAVEKIKKIIQDGIEFPELQNDLRKNQMKQLAILNGTYRET 403

The following BLAST results are available for this feature:

BLAST of KH domain-containing protein vs. Ensembl Human
BLAST of KH domain-containing protein vs. Ensembl Celegans
BLAST of KH domain-containing protein vs. Ensembl Fly
BLAST of KH domain-containing protein vs. Ensembl Zebrafish
BLAST of KH domain-containing protein vs. Ensembl Xenopus
BLAST of KH domain-containing protein vs. Ensembl Mouse
BLAST of KH domain-containing protein vs. UniProt/SwissProt
BLAST of KH domain-containing protein vs. TrEMBL
BLAST of KH domain-containing protein vs. Ensembl Cavefish
BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
BLAST of KH domain-containing protein vs. Ensembl Yeast
BLAST of KH domain-containing protein vs. Ensembl Nematostella
BLAST of KH domain-containing protein vs. Ensembl Medaka
BLAST of KH domain-containing protein vs. Planmine SMEST

BLAST of KH domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
QKI	4.717e-64	54.81	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	5.903e-64	54.81	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	9.288e-64	54.85	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	9.288e-64	54.85	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	1.152e-63	54.85	QKI, KH domain containing RNA binding [Source:HGNC...	[more]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
asd-2	1.425e-58	53.01	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]
asd-2	6.625e-58	53.01	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]
asd-2	3.015e-57	53.01	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]
asd-2	3.399e-57	53.01	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]
gld-1	7.326e-57	50.00	Female germline-specific tumor suppressor gld-1 [...	[more]

BLAST of KH domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
how	1.422e-69	59.89	gene:FBgn0264491 transcript:FBtr0084178	[more]
how	1.533e-69	59.89	gene:FBgn0264491 transcript:FBtr0100514	[more]
how	3.205e-69	59.89	gene:FBgn0264491 transcript:FBtr0084177	[more]
how	3.205e-69	59.89	gene:FBgn0264491 transcript:FBtr0301401	[more]
how	3.290e-69	59.89	gene:FBgn0264491 transcript:FBtr0301402	[more]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
qki2	1.681e-63	54.37	QKI, KH domain containing, RNA binding 2 [Source:N...	[more]
qki2	1.997e-63	54.37	QKI, KH domain containing, RNA binding 2 [Source:N...	[more]
qki2	1.141e-62	55.98	QKI, KH domain containing, RNA binding 2 [Source:N...	[more]
qkib	1.934e-61	54.85	QKI, KH domain containing, RNA binding b [Source:Z...	[more]
qkib	2.985e-61	54.85	QKI, KH domain containing, RNA binding b [Source:Z...	[more]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
spsb3	6.515e-64	54.81	splA/ryanodine receptor domain and SOCS box contai...	[more]
spsb3	2.322e-59	51.12	splA/ryanodine receptor domain and SOCS box contai...	[more]
spsb3	2.402e-59	51.12	splA/ryanodine receptor domain and SOCS box contai...	[more]
spsb3	2.395e-50	52.51	splA/ryanodine receptor domain and SOCS box contai...	[more]
pdc	9.186e-26	35.26	phosducin [Source:Xenbase;Acc:XB-GENE-983832]	[more]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Qk	6.376e-64	54.85	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Qk	6.376e-64	54.85	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Qk	7.908e-64	54.85	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Qk	1.286e-63	54.85	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Khdrbs2	6.598e-26	36.21	KH domain containing, RNA binding, signal transduc...	[more]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|O01367\|HOW_DROME	3.212e-68	59.89	Protein held out wings OS=Drosophila melanogaster ...	[more]
sp\|Q6IRN2\|QKIB_XENLA	3.430e-63	54.81	Protein quaking-B OS=Xenopus laevis OX=8355 GN=qki...	[more]
sp\|Q5W9D5\|QKI_PIG	8.993e-63	54.85	Protein quaking OS=Sus scrofa OX=9823 GN=QKI PE=2 ...	[more]
sp\|Q9QYS9\|QKI_MOUSE	8.993e-63	54.85	Protein quaking OS=Mus musculus OX=10090 GN=Qki PE...	[more]
sp\|Q96PU8\|QKI_HUMAN	8.993e-63	54.85	Protein quaking OS=Homo sapiens OX=9606 GN=QKI PE=...	[more]

BLAST of KH domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
G7Y7G8	1.788e-81	57.20	Protein quaking (Fragment) OS=Clonorchis sinensis ...	[more]
A0A1I8HVJ9	1.918e-76	63.73	KH domain-containing protein OS=Macrostomum lignan...	[more]
A0A1I8GFL6	9.575e-76	63.73	KH domain-containing protein OS=Macrostomum lignan...	[more]
A0A068WQP5	2.309e-73	61.95	KH domain-containing protein OS=Echinococcus granu...	[more]
A0A5K4EVS6	3.308e-73	65.48	Kh-domain rna binding protein-related OS=Schistoso...	[more]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
qki2	2.232e-63	54.37	protein quaking-B [Source:NCBI gene;Acc:103029551]	[more]
qki2	3.211e-63	54.37	protein quaking-B [Source:NCBI gene;Acc:103029551]	[more]
qki2	4.493e-63	54.37	protein quaking-B [Source:NCBI gene;Acc:103029551]	[more]
qkib	7.752e-62	52.83	QKI, KH domain containing, RNA binding b [Source:Z...	[more]
qkia	1.302e-55	45.89	QKI, KH domain containing, RNA binding a [Source:N...	[more]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4


Match Name	E-value	Identity	Description
KHDRBS3	3.308e-25	41.41	KH RNA binding domain containing, signal transduct...	[more]
khdrbs2	1.982e-22	36.72	KH domain containing, RNA binding, signal transduc...	[more]
sf1	2.244e-22	38.41	splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131...	[more]
khdrbs1a	8.342e-22	38.58	KH domain containing, RNA binding, signal transduc...	[more]

BLAST of KH domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
MSL5	1.889e-21	34.35	Component of commitment complex; which defines fir...	[more]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO30297	3.839e-50	45.51	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO44127	8.215e-28	42.52	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28641	5.178e-25	51.11	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26937	3.153e-14	41.33	pep supercontig:ASM20922v1:NEMVEscaffold_5067:6022...	[more]
EDO45484	2.612e-12	53.85	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000045137.1	2.054e-61	52.38	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000031315.1	2.789e-61	52.38	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000044982.1	3.330e-61	52.38	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000033069.1	4.546e-61	52.38	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000027064.1	6.573e-61	52.38	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]

BLAST of KH domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000068399.1	0.000e+0	99.45	SMESG000068399.1	[more]
SMESG000080790.1	1.597e-50	49.43	SMESG000080790.1	[more]
SMESG000069949.1	7.593e-35	42.37	SMESG000069949.1	[more]
SMESG000031862.1	1.778e-22	43.28	SMESG000031862.1	[more]
SMESG000031867.1	4.379e-20	38.24	SMESG000031867.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30010781 ID=SMED30010781|Name=KH domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1288bp
CAATAAATTTAACCTTGAGATGATAATAATTTAAATGCAAAATAAGTAAC
GTTATAAATTGAAAAAAATAATTTCTCTATAAAAAATGGATAAAAAGCAA
TCTTCTCCTGATGTAACAGCGTCAATTTTTGAAGGCCACTGGTTCCCAAA
AGCGACTCCTGAATATCTGCAGGAACTTCTGCAAGACAAGCAAAAATTGC
AGTGCTTTCAGCCGAATTTCAACTTCAGACATTTGCTTAATATCTTAGAG
AAAGAGATCAATCGAGTGAGAGAGAAACTGTTTCACATTAATGGAACAAG
TGGACAGACTAAATCTATTGAAAACGCACTTCCGTGTCCGAAAGGCGAAT
ATGTTACTTTACAAGAAAAGGTTTACGTTCCAGTTGATGAAAATCCAAAC
TATAACTTCATCGGTCGAATACTTGGTCCAAGAGGCTTGACTGCCAAACA
ATTAGAACAAGAGCTTCAATGTAAATTGATGATAAGAGGAAAAGGGTCGC
TACGAAACAAAGAAAAAGAGGACGAACTCAGAGGTAAACCTAATTGGGAA
CATCTTAATGACAAATTGCACATCAACATCACAGTTGAGGATTATGAAAA
TAGAGCCGTTATTAAATTAAAATTGGCCTTGGATGCCATAGAAAAATTCA
TCGAGCAAGGAATCAAAATGCCTGACGGCGAGGATGATATTAAAAAACGT
CAGTTAATGGAGTTGGCAATTATCAATGGAACCTATCGAGATACAAGTAA
AAAGTCTCAAACTCCCAATTCGAAATCTGAGACTAAAACAACCTCAACAA
CAGTTGACGGAAAACCAGCGAATTTCTCGTATTCGAACAGCTCAATTCTT
CCTAACTATGTTTCGTTCAATAACATGCTGCCTCAAACAAATCACGATTC
AAGTTTACTGAATATTTTGCCTTCAGTTCACAGCTCAAATTTACCAAACA
ACTTGAATTCTTCTTATAATTCAATGTTACCAATACTTGATCCGAACCTA
ATGAATATTTTGACAAACTATCGCTCTTCCACTCTAGATTCAATGCTTCC
AATTACCCAGTTCGCGGGATTGTACAATTTGACAGATGTAAATATTGGAC
CCAATAATCTATTAGGTCCCATTCGAATTCGAAACATGTCTTCAATGATG
AGGCCACATCCATATCAAATGATGGGAAACATTTAAATATTTTAATAAAC
ATTTTTTAATAAGAATTACATTAGTGTTCTTGGGCAACTGTAAAAATATT
CTCTTTGCATTTTCATAAAAACCAATTTAACAGCCTTT

protein sequence of SMED30010781-orf-1

>SMED30010781-orf-1 ID=SMED30010781-orf-1|Name=SMED30010781-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=367bp
MDKKQSSPDVTASIFEGHWFPKATPEYLQELLQDKQKLQCFQPNFNFRHL
LNILEKEINRVREKLFHINGTSGQTKSIENALPCPKGEYVTLQEKVYVPV
DENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRG
KPNWEHLNDKLHINITVEDYENRAVIKLKLALDAIEKFIEQGIKMPDGED
DIKKRQLMELAIINGTYRDTSKKSQTPNSKSETKTTSTTVDGKPANFSYS
NSSILPNYVSFNNMLPQTNHDSSLLNILPSVHSSNLPNNLNSSYNSMLPI
LDPNLMNILTNYRSSTLDSMLPITQFAGLYNLTDVNIGPNNLLGPIRIRN
MSSMMRPHPYQMMGNI*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000099	neuron
PLANA:0000418	head

Vocabulary: **INTERPRO**
Term	Definition
IPR036612	KH_dom_type_1_sf
IPR004087	KH_dom
IPR004088	KH_dom_type_1
IPR032377	STAR_dimer

Vocabulary: **molecular function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0003727	single-stranded RNA binding

Vocabulary: **biological process**
Term	Definition
GO:0006417	regulation of translation

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 90..186 e-value: 1.8E-6 score: 37.5
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 21..71 e-value: 1.0E-14 score: 53.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	G3DSA:3.30.1370.10		coord: 20..227 e-value: 1.7E-67 score: 229.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 92..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..243
None	No IPR available	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 22..317
None	No IPR available	PANTHER	PTHR11208:SF90	PROTEIN QUAKING	coord: 22..317
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 93..218 e-value: 8.19585E-51 score: 163.954