UBR-type domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010763 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of UBR-type domain-containing protein vs. Ensembl Human
Match: UBR7 (ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:HGNC Symbol;Acc:HGNC:20344]) HSP 1 Score: 110.538 bits (275), Expect = 1.520e-25 Identity = 55/107 (51.40%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEY 411 L G D++ C++ +G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L +K +N NKYN NF GLYC+C Y Sbjct: 38 LGGSDSEK--CSYSQGSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPY 141 HSP 2 Score: 56.9954 bits (136), Expect = 5.371e-8 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY 1066 +EMIQCV+CEDW+H +HL A +S F+E VC+ C++RC +L Y Sbjct: 150 DEMIQCVVCEDWFHGRHLGAIPPESG---DFQEMVCQACMKRCSFLWAY 195
BLAST of UBR-type domain-containing protein vs. Ensembl Human
Match: UBR7 (ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:HGNC Symbol;Acc:HGNC:20344]) HSP 1 Score: 110.538 bits (275), Expect = 1.520e-25 Identity = 55/107 (51.40%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEY 411 L G D++ C++ +G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L +K +N NKYN NF GLYC+C Y Sbjct: 38 LGGSDSEK--CSYSQGSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPY 141 HSP 2 Score: 56.9954 bits (136), Expect = 5.371e-8 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY 1066 +EMIQCV+CEDW+H +HL A +S F+E VC+ C++RC +L Y Sbjct: 150 DEMIQCVVCEDWFHGRHLGAIPPESG---DFQEMVCQACMKRCSFLWAY 195
BLAST of UBR-type domain-containing protein vs. Ensembl Human
Match: AL110118.2 (novel protein) HSP 1 Score: 103.99 bits (258), Expect = 2.527e-25 Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 136 GYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L +K +N NKYN NF GLYC+C Y + + Sbjct: 70 GSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPE 164
BLAST of UBR-type domain-containing protein vs. Ensembl Human
Match: AL110118.4 (novel protein) HSP 1 Score: 103.99 bits (258), Expect = 2.527e-25 Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 136 GYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L +K +N NKYN NF GLYC+C Y + + Sbjct: 70 GSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPE 164
BLAST of UBR-type domain-containing protein vs. Ensembl Human
Match: UBR7 (ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:HGNC Symbol;Acc:HGNC:20344]) HSP 1 Score: 84.3445 bits (207), Expect = 1.640e-18 Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 L G D++ C++ +G RQALY C TC + AGIC CS CH H L +LYTK F+ N +C+L +K +N NKYN NF GLYC+C Y + + Sbjct: 38 LGGSDSEK--CSYSQGSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKSKFK----------NLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPE 136
BLAST of UBR-type domain-containing protein vs. Ensembl Celegans
Match: T22C1.1 (pep chromosome:WBcel235:I:7936264:7937865:1 gene:WBGene00011912.1 transcript:T22C1.1.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T22C1.1) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-24 Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 40 EEDTISFQEI-----YDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEY 411 EE+ ++ EI Y + ++ + + CT+ +GY RQ L+ CLTC + + AG+C+ C+++CH GH++ +LYTKR F+CDCGNS F + KC L+E+KD N N YNHN++G +C C+ Y Sbjct: 19 EEEAVTLGEIVETIDYLEDKADVLFATQNPNVCTYAEGYKPRQTLFTCLTCTP-APEMAGVCYGCALNCHDGHIIVELYTKRKFKCDCGNSKFGEK-KCALYEDKDAKNEYNMYNHNYNGKFCTCDVFY 145 HSP 2 Score: 62.003 bits (149), Expect = 3.987e-10 Identity = 55/226 (24.34%), Postives = 93/226 (41.15%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLA-----------ASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKF-------NDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN---GGPDKVVTTEDVHNFFDKIKRRRLEK 1534 +E++QC ICEDW+H +H+ + SD+ VC +C+++ +L K IA + EP +L + +R LC+CA C ++ + + FL + D IA + + ++K +DE +E + + A + FKR+L +FLN GG + + D+ FFD +K LEK Sbjct: 152 KELLQCEICEDWFHEEHMPFKDVNYYYEEIEANSDTILNRDIASAVCLVCIKKLPFLMHMKSGKDVFCHSKLIAEETK-----------------PEPHALCIEH--------FRAKLCKCADCVRVYEMADCEFLLDDEDDIATFDSESRKKVEENKTTEDDEMREMVKQIGMDGAQHFYSEVHNFKRKLEDFLNTKAEGG--RTIAASDIKTFFDALKEENLEK 350
BLAST of UBR-type domain-containing protein vs. Ensembl Celegans
Match: T22C1.1 (pep chromosome:WBcel235:I:7936223:7938328:1 gene:WBGene00011912.1 transcript:T22C1.1.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T22C1.1) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-24 Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 40 EEDTISFQEI-----YDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEY 411 EE+ ++ EI Y + ++ + + CT+ +GY RQ L+ CLTC + + AG+C+ C+++CH GH++ +LYTKR F+CDCGNS F + KC L+E+KD N N YNHN++G +C C+ Y Sbjct: 19 EEEAVTLGEIVETIDYLEDKADVLFATQNPNVCTYAEGYKPRQTLFTCLTCTP-APEMAGVCYGCALNCHDGHIIVELYTKRKFKCDCGNSKFGEK-KCALYEDKDAKNEYNMYNHNYNGKFCTCDVFY 145 HSP 2 Score: 62.003 bits (149), Expect = 3.987e-10 Identity = 55/226 (24.34%), Postives = 93/226 (41.15%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLA-----------ASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKF-------NDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN---GGPDKVVTTEDVHNFFDKIKRRRLEK 1534 +E++QC ICEDW+H +H+ + SD+ VC +C+++ +L K IA + EP +L + +R LC+CA C ++ + + FL + D IA + + ++K +DE +E + + A + FKR+L +FLN GG + + D+ FFD +K LEK Sbjct: 152 KELLQCEICEDWFHEEHMPFKDVNYYYEEIEANSDTILNRDIASAVCLVCIKKLPFLMHMKSGKDVFCHSKLIAEETK-----------------PEPHALCIEH--------FRAKLCKCADCVRVYEMADCEFLLDDEDDIATFDSESRKKVEENKTTEDDEMREMVKQIGMDGAQHFYSEVHNFKRKLEDFLNTKAEGG--RTIAASDIKTFFDALKEENLEK 350
BLAST of UBR-type domain-containing protein vs. Ensembl Celegans
Match: T22C1.1 (pep chromosome:WBcel235:I:7936264:7938328:1 gene:WBGene00011912.1 transcript:T22C1.1.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T22C1.1) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-24 Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 40 EEDTISFQEI-----YDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEY 411 EE+ ++ EI Y + ++ + + CT+ +GY RQ L+ CLTC + + AG+C+ C+++CH GH++ +LYTKR F+CDCGNS F + KC L+E+KD N N YNHN++G +C C+ Y Sbjct: 19 EEEAVTLGEIVETIDYLEDKADVLFATQNPNVCTYAEGYKPRQTLFTCLTCTP-APEMAGVCYGCALNCHDGHIIVELYTKRKFKCDCGNSKFGEK-KCALYEDKDAKNEYNMYNHNYNGKFCTCDVFY 145 HSP 2 Score: 62.003 bits (149), Expect = 3.987e-10 Identity = 55/226 (24.34%), Postives = 93/226 (41.15%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLA-----------ASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKF-------NDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN---GGPDKVVTTEDVHNFFDKIKRRRLEK 1534 +E++QC ICEDW+H +H+ + SD+ VC +C+++ +L K IA + EP +L + +R LC+CA C ++ + + FL + D IA + + ++K +DE +E + + A + FKR+L +FLN GG + + D+ FFD +K LEK Sbjct: 152 KELLQCEICEDWFHEEHMPFKDVNYYYEEIEANSDTILNRDIASAVCLVCIKKLPFLMHMKSGKDVFCHSKLIAEETK-----------------PEPHALCIEH--------FRAKLCKCADCVRVYEMADCEFLLDDEDDIATFDSESRKKVEENKTTEDDEMREMVKQIGMDGAQHFYSEVHNFKRKLEDFLNTKAEGG--RTIAASDIKTFFDALKEENLEK 350
BLAST of UBR-type domain-containing protein vs. Ensembl Celegans
Match: ubr-4 (UBR E3 ubiquitin ligase homolog [Source:UniProtKB/TrEMBL;Acc:Q7KQG4]) HSP 1 Score: 49.6766 bits (117), Expect = 7.063e-6 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 109 DDSCCTFPK-GYAY-RQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKR-NFRCDCGNS---------NFPD---NFKCQLWEEKDDIN---IKNKYNHNFSGLYCVCNSE 408 D + CT+ G AY Q Y+C TC + + G+C C+++CH GH L Y+K+ +F CDCG + P+ + + QL E+ D I+N + H F L C E Sbjct: 1219 DLNFCTYKSTGRAYVTQHWYNCYTCNMMESE--GVCSVCAINCHRGHDLA--YSKKGSFFCDCGEKKCGAMQGIYHLPNSMYSLRGQLPEKNGDKTLPKIRNVFEHRFENLNSNCCDE 1332
BLAST of UBR-type domain-containing protein vs. Ensembl Celegans
Match: ubr-4 (UBR E3 ubiquitin ligase homolog [Source:UniProtKB/TrEMBL;Acc:Q7KQG4]) HSP 1 Score: 49.6766 bits (117), Expect = 7.123e-6 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 109 DDSCCTFPK-GYAY-RQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKR-NFRCDCGNS---------NFPD---NFKCQLWEEKDDIN---IKNKYNHNFSGLYCVCNSE 408 D + CT+ G AY Q Y+C TC + + G+C C+++CH GH L Y+K+ +F CDCG + P+ + + QL E+ D I+N + H F L C E Sbjct: 1212 DLNFCTYKSTGRAYVTQHWYNCYTCNMMESE--GVCSVCAINCHRGHDLA--YSKKGSFFCDCGEKKCGAMQGIYHLPNSMYSLRGQLPEKNGDKTLPKIRNVFEHRFENLNSNCCDE 1325
BLAST of UBR-type domain-containing protein vs. Ensembl Fly
Match: CG15141 (gene:FBgn0032635 transcript:FBtr0080979) HSP 1 Score: 98.5969 bits (244), Expect = 6.039e-22 Identity = 60/144 (41.67%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 19 MAESENLEEDTISFQEIYDYETR------NLAGCDNDDSCCTFPKGYAYRQALYHCLTC----REISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDI---NIKNKYNHNFSGLYCVCNSEY 411 + ES LE+ TI+ ++ + E + G +D+ CT+ KG RQALY CLTC RE K AG+C CS CH H L +LYTKRNFRCDC KC L + + + N+ N YN NF GLYC C Y Sbjct: 13 VEESNPLEQSTITMLDVLEQEKELEDEYAAVLGA-SDEKSCTYAKGPIGRQALYSCLTCCPEAREDLDKAAGVCLACSYRCHEHHELVELYTKRNFRCDCPTQRL---GKCSLNPQVEGVQPRNVGNLYNQNFQGLYCKCKRPY 152 HSP 2 Score: 91.6633 bits (226), Expect = 1.178e-19 Identity = 62/226 (27.43%), Postives = 99/226 (43.81%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVL-----GKYIAADGNCNLEAARAALEQLG--------------------NNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKF--NDEFKEQMSTMPHAVAIKLADGIAYFKR---ELIEFLNN-GGPDKVVTTEDVHNFF 1504 E M+QC ICEDW+HL H+ A G+ + L+ E +C C++ +L Y ++ VL K A D E R+ + + ++C P + G AFW +DWR+SLC+C+ C L K FL + D+ Y ++ N +++ + + + D I + R +L E+L KVVT ED++ FF Sbjct: 161 EVMLQCAICEDWFHLPHMKAPGASDKWLDVCSEMICDGCMDAKPFLKDYTGLALQPVLEDAKEDKPEADDSQLKNELDRSICDIMKVPEGESQPDEGEPSQKRAKLDDCRRPKPTKEHQGAAFWTNDWRKSLCQCSECLSLYKELAVEFLLDVEDSAKTYEERGMKRAEENSSYEQGIRALASIDRTQQIDAITEYNRMKDKLKEYLQAFAASKKVVTEEDINRFF 386
BLAST of UBR-type domain-containing protein vs. Ensembl Zebrafish
Match: ubr7 (ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]) HSP 1 Score: 120.553 bits (301), Expect = 3.045e-29 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 L G D++ C++P+GY RQALY C TC G+ AGIC CS CH GH L +LYTKRNFRCDCGN F D +C+L+ +K+ +N NKY+HNF GLYC C+ Y + + Sbjct: 31 LGGSDSEK--CSYPEGYVKRQALYACNTCTPKGGEPAGICLACSYKCHEGHDLFELYTKRNFRCDCGNDKFGD-MECKLFADKEKVNSGNKYSHNFFGLYCTCDRPYPDPE 138 HSP 2 Score: 56.6102 bits (135), Expect = 3.592e-8 Identity = 57/262 (21.76%), Postives = 98/262 (37.40%), Query Frame = 2 Query: 917 TEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY-NRASVNKVL---------------------------GKYIAADGNCNLEAARAALEQLGNNCE----------------EPGSLSGNNGGAFW-PSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY-----YTNDQEKFN-----DEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDKIKRRRLEK 1534 ++EMIQC++CEDW H +HL + D L +E +C+ C+ + +L Y + +V+ ++ A D + +L + E + +S GA + PS WR LC C C+ L FL + DT+ Y T E+ D ++ + +++ K EL ++L KVVT ED+ FF++ + R+ + Sbjct: 142 SDEMIQCIVCEDWLHGRHLGCAVPDCVEL---QEMICESCMNKTPFLWNYAAQIAVSPIIKVSPCKAEEDVKVEVEKEEEEKMVKNENTKSAVDEKVQMNGTSGCKRKLQDESEGSSGHGLCSGCRLREMKASGISRKQQGAVFWPSAWRTKLCSCPDCKVLYADAGLCFLTDEADTVLAYENKGKSTEQAEQAGGAGGRDPLMSALNNLNRVQQLEIIHEYNDMKTELKDYLQRFAAEGKVVTPEDIRQFFEQQQSRKRRR 400
BLAST of UBR-type domain-containing protein vs. Ensembl Zebrafish
Match: CABZ01066926.1 (putative E3 ubiquitin-protein ligase UBR7 [Source:NCBI gene;Acc:100329344]) HSP 1 Score: 74.3294 bits (181), Expect = 3.371e-14 Identity = 60/226 (26.55%), Postives = 98/226 (43.36%), Query Frame = 2 Query: 911 QDTEEMIQCVICEDWYHLKHLAASGSDSQPL--EHFEEFVCKLCLERCEYL----ALYNRASVNKVLG--KYIAADGNCNLE----------AARAALEQLGNNC-----EEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY---YTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGG-PDKVVTTEDVHNFFD 1507 Q +EM+QCV+CEDW+H KHL A PL + E VC C++R +L A ++ ++VN + + AA C E A + L C ++ + + +G FWP DWR LC C C+++ FL + +DT+ Y + + ++T+ H + + K+EL EFL + +T E + F + Sbjct: 75 QVNDEMVQCVVCEDWFHEKHLQAP-----PLCCDSLTEMVCVGCMKRVPFLWTYAAHFSVSAVNSAVSSRETTAASVCCQQEAAAASADAGVCAASPLCSGSGVCVFTKLKDTETHTDQHGSVFWPYDWRSKLCTCTDCKRMYVASGVQFLLDESDTVLAYEDRAKTEALRSGGGVLSCLNTLTHQQQLDTLYRLNEMKQELCEFLQQCSEQSQQLTPEGLQEFLE 295 HSP 2 Score: 64.3142 bits (155), Expect = 8.224e-11 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 262 TKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES 420 +R+FRCDCGN FP F C+L KD N+KN YNHN+SG YC C+ Y ++ Sbjct: 21 ARRSFRCDCGNEKFP-GFSCRLHANKDGRNVKNSYNHNYSGRYCSCDRPYPDT 72
BLAST of UBR-type domain-containing protein vs. Ensembl Zebrafish
Match: ubr7 (ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]) HSP 1 Score: 50.0618 bits (118), Expect = 2.426e-6 Identity = 33/122 (27.05%), Postives = 51/122 (41.80%), Query Frame = 2 Query: 1202 GGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY-----YTNDQEKFN-----DEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDKIKRRRLEK 1534 G FWPS WR LC C C+ L FL + DT+ Y T E+ D ++ + +++ K EL ++L KVVT ED+ FF++ + R+ + Sbjct: 104 GAVFWPSAWRTKLCSCPDCKVLYADAGLCFLTDEADTVLAYENKGKSTEQAEQAGGAGGRDPLMSALNNLNRVQQLEIIHEYNDMKTELKDYLQRFAAEGKVVTPEDIRQFFEQQQSRKRRR 225
BLAST of UBR-type domain-containing protein vs. Ensembl Xenopus
Match: pbx1 (pre-B-cell leukemia homeobox 1 [Source:Xenbase;Acc:XB-GENE-1217592]) HSP 1 Score: 113.235 bits (282), Expect = 7.840e-27 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 7 ISNIMAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + +++ E + LE++ + L CD + C++P+GY RQALY C TC AGIC CS CH GH L +LYTKRNFRCDCGN+ F +C+L+ EK++ N NKYN NF G+YC C Y + + Sbjct: 22 LLDVLEEDDALEDEACAV----------LGACDAEK--CSYPEGYVRRQALYACNTCTPNKEDPAGICLACSYKCHEGHDLFELYTKRNFRCDCGNAKF-KQLECKLFSEKENSNSLNKYNQNFFGVYCTCKRPYPDPE 147 HSP 2 Score: 110.923 bits (276), Expect = 5.848e-26 Identity = 74/224 (33.04%), Postives = 111/224 (49.55%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEH--FEEFVCKLCLERCEYLALYNRASVNKVLGKYIA---ADGN----CNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPD-KVVTTEDVHNFFDKI---KRRRLEKFE 1540 +EMIQC++CEDW+H +HL A P EH FEE VC+ C++RC +L Y +K ++ ADG EA ++ +L P +S N +WPS+WR LC C C+ + + E FL + NDT+ Y T + D +S+M ++L K EL ++L + KVV TED+ FF+++ KRRRL+ + Sbjct: 152 DEMIQCIVCEDWFHGRHLGAV-----PPEHMDFEEMVCQTCMDRCSFLWTYAAHIASKAYIIFLVEKCADGKDSHLLKTEANAQSVCKLQEMKMHP--VSKANTATYWPSNWRSKLCTCDDCKNMYTKFEVLFLLDENDTVQAYENKGKTQQATERRDPLMTALSSMNRVQQVELICEYNDLKTELTDYLKRFAEEGKVVKTEDIQQFFEELRSRKRRRLDGMQ 368
BLAST of UBR-type domain-containing protein vs. Ensembl Xenopus
Match: pbx1 (pre-B-cell leukemia homeobox 1 [Source:Xenbase;Acc:XB-GENE-1217592]) HSP 1 Score: 113.235 bits (282), Expect = 8.325e-27 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 7 ISNIMAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + +++ E + LE++ + L CD + C++P+GY RQALY C TC AGIC CS CH GH L +LYTKRNFRCDCGN+ F +C+L+ EK++ N NKYN NF G+YC C Y + + Sbjct: 13 LLDVLEEDDALEDEACAV----------LGACDAEK--CSYPEGYVRRQALYACNTCTPNKEDPAGICLACSYKCHEGHDLFELYTKRNFRCDCGNAKF-KQLECKLFSEKENSNSLNKYNQNFFGVYCTCKRPYPDPE 138 HSP 2 Score: 105.145 bits (261), Expect = 6.183e-24 Identity = 74/234 (31.62%), Postives = 111/234 (47.44%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEH--FEEFVCKLCLERCEYLALYNRASVNKVLGKYI--AADGNCNL------------------EAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPD-KVVTTEDVHNFFDKI---KRRRLE 1531 +EMIQC++CEDW+H +HL A P EH FEE VC+ C++RC +L Y +K ++ A +C L EA ++ +L P +S N +WPS+WR LC C C+ + + E FL + NDT+ Y T + D +S+M ++L K EL ++L + KVV TED+ FF+++ KRRRL+ Sbjct: 143 DEMIQCIVCEDWFHGRHLGAV-----PPEHMDFEEMVCQTCMDRCSFLWTYAAHIASKAYIIFLVEAFYFSCTLLFFPQYYIYVFDSHLLKTEANAQSVCKLQEMKMHP--VSKANTATYWPSNWRSKLCTCDDCKNMYTKFEVLFLLDENDTVQAYENKGKTQQATERRDPLMTALSSMNRVQQVELICEYNDLKTELTDYLKRFAEEGKVVKTEDIQQFFEELRSRKRRRLD 369
BLAST of UBR-type domain-containing protein vs. Ensembl Xenopus
Match: pbx1 (pre-B-cell leukemia homeobox 1 [Source:Xenbase;Acc:XB-GENE-1217592]) HSP 1 Score: 113.235 bits (282), Expect = 9.298e-27 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 7 ISNIMAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + +++ E + LE++ + L CD + C++P+GY RQALY C TC AGIC CS CH GH L +LYTKRNFRCDCGN+ F +C+L+ EK++ N NKYN NF G+YC C Y + + Sbjct: 27 LLDVLEEDDALEDEACAV----------LGACDAEK--CSYPEGYVRRQALYACNTCTPNKEDPAGICLACSYKCHEGHDLFELYTKRNFRCDCGNAKF-KQLECKLFSEKENSNSLNKYNQNFFGVYCTCKRPYPDPE 152 HSP 2 Score: 110.538 bits (275), Expect = 7.394e-26 Identity = 74/224 (33.04%), Postives = 111/224 (49.55%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEH--FEEFVCKLCLERCEYLALYNRASVNKVLGKYIA---ADGN----CNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPD-KVVTTEDVHNFFDKI---KRRRLEKFE 1540 +EMIQC++CEDW+H +HL A P EH FEE VC+ C++RC +L Y +K ++ ADG EA ++ +L P +S N +WPS+WR LC C C+ + + E FL + NDT+ Y T + D +S+M ++L K EL ++L + KVV TED+ FF+++ KRRRL+ + Sbjct: 157 DEMIQCIVCEDWFHGRHLGAV-----PPEHMDFEEMVCQTCMDRCSFLWTYAAHIASKAYIIFLVEKCADGKDSHLLKTEANAQSVCKLQEMKMHP--VSKANTATYWPSNWRSKLCTCDDCKNMYTKFEVLFLLDENDTVQAYENKGKTQQATERRDPLMTALSSMNRVQQVELICEYNDLKTELTDYLKRFAEEGKVVKTEDIQQFFEELRSRKRRRLDGMQ 373
BLAST of UBR-type domain-containing protein vs. Ensembl Xenopus
Match: pbx1 (pre-B-cell leukemia homeobox 1 [Source:Xenbase;Acc:XB-GENE-1217592]) HSP 1 Score: 113.235 bits (282), Expect = 1.059e-26 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 7 ISNIMAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + +++ E + LE++ + L CD + C++P+GY RQALY C TC AGIC CS CH GH L +LYTKRNFRCDCGN+ F +C+L+ EK++ N NKYN NF G+YC C Y + + Sbjct: 17 LLDVLEEDDALEDEACAV----------LGACDAEK--CSYPEGYVRRQALYACNTCTPNKEDPAGICLACSYKCHEGHDLFELYTKRNFRCDCGNAKF-KQLECKLFSEKENSNSLNKYNQNFFGVYCTCKRPYPDPE 142 HSP 2 Score: 103.99 bits (258), Expect = 1.359e-23 Identity = 74/240 (30.83%), Postives = 110/240 (45.83%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEH--FEEFVCKLCLERCEYLALYNRASVNKVLGKYIA----------------------ADGN----CNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPD-KVVTTEDVHNFFDKI---KRRRLE 1531 +EMIQC++CEDW+H +HL A P EH FEE VC+ C++RC +L Y +K ++ ADG EA ++ +L P +S N +WPS+WR LC C C+ + + E FL + NDT+ Y T + D +S+M ++L K EL ++L + KVV TED+ FF+++ KRRRL+ Sbjct: 147 DEMIQCIVCEDWFHGRHLGAV-----PPEHMDFEEMVCQTCMDRCSFLWTYAAHIASKAYIIFLVEAFYFSCTLLFFPQYYIYVFKCADGKDSHLLKTEANAQSVCKLQEMKMHP--VSKANTATYWPSNWRSKLCTCDDCKNMYTKFEVLFLLDENDTVQAYENKGKTQQATERRDPLMTALSSMNRVQQVELICEYNDLKTELTDYLKRFAEEGKVVKTEDIQQFFEELRSRKRRRLD 379
BLAST of UBR-type domain-containing protein vs. Ensembl Xenopus
Match: pbx1 (pre-B-cell leukemia homeobox 1 [Source:Xenbase;Acc:XB-GENE-1217592]) HSP 1 Score: 113.62 bits (283), Expect = 1.215e-26 Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 L CD + C++P+GY RQALY C TC AGIC CS CH GH L +LYTKRNFRCDCGN+ F +C+L+ EK++ N NKYN NF G+YC C Y + + Sbjct: 40 LGACDAEK--CSYPEGYVRRQALYACNTCTPNKEDPAGICLACSYKCHEGHDLFELYTKRNFRCDCGNAKF-KQLECKLFSEKENSNSLNKYNQNFFGVYCTCKRPYPDPE 147 HSP 2 Score: 97.8265 bits (242), Expect = 2.688e-21 Identity = 73/261 (27.97%), Postives = 109/261 (41.76%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEH--FEEFVCKLCLERCEYLALY------NRASVNKVLGKYIAADGNCNLEAARAALE-----------------QLGNNCEEPGSL---------------------SGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPD-KVVTTEDVHNFFDKI---KRRRLEKFE 1540 +EMIQC++CEDW+H +HL A P EH FEE VC+ C++RC +L Y V+ L + I N++ + E E+ L S N +WPS+WR LC C C+ + + E FL + NDT+ Y T + D +S+M ++L K EL ++L + KVV TED+ FF+++ KRRRL+ + Sbjct: 152 DEMIQCIVCEDWFHGRHLGAV-----PPEHMDFEEMVCQTCMDRCSFLWTYAAHIASKDIKVDDSLAEGILDGDGSNIKTEKLKEEITACVIKEEEINKTNGASTSTETEQDSHLLKTEANAQSVCKLQEMKMHPVSKANTATYWPSNWRSKLCTCDDCKNMYTKFEVLFLLDENDTVQAYENKGKTQQATERRDPLMTALSSMNRVQQVELICEYNDLKTELTDYLKRFAEEGKVVKTEDIQQFFEELRSRKRRRLDGMQ 407
BLAST of UBR-type domain-containing protein vs. Ensembl Mouse
Match: Ubr7 (ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:MGI Symbol;Acc:MGI:1913872]) HSP 1 Score: 110.153 bits (274), Expect = 1.333e-25 Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 L G D++ C++ +G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L+ +K +N NKYN NF GLYCVC Y + + Sbjct: 38 LGGSDSEK--CSYSQGSVGRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLFPDKSKVNSCNKYNDNFFGLYCVCKRPYPDPE 145 HSP 2 Score: 56.6102 bits (135), Expect = 5.103e-8 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY 1066 +EMIQCV+CEDW+H +HL A +S F+E VC+ C+ RC +L Y Sbjct: 150 DEMIQCVVCEDWFHGRHLGAIPPESG---DFQEMVCQACMRRCSFLWAY 195 HSP 3 Score: 52.373 bits (124), Expect = 1.006e-6 Identity = 34/122 (27.87%), Postives = 55/122 (45.08%), Query Frame = 2 Query: 1199 NGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYT---NDQ-EKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDKI---KRRRLEKFE 1540 + +WP +WR LC C C ++ + FL + DT+ Y NDQ D + +S+M ++L K EL ++L VV ED+ FF++ KRRR++ + Sbjct: 300 DAATYWPLNWRSKLCTCQDCMKMYGELDVLFLTDECDTVLAYENKGKNDQATDRRDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGLQ 421
BLAST of UBR-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8N806|UBR7_HUMAN (Putative E3 ubiquitin-protein ligase UBR7 OS=Homo sapiens OX=9606 GN=UBR7 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 7.301e-25 Identity = 55/107 (51.40%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEY 411 L G D++ C++ +G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L +K +N NKYN NF GLYC+C Y Sbjct: 38 LGGSDSEK--CSYSQGSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPY 141 HSP 2 Score: 56.9954 bits (136), Expect = 2.579e-7 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY 1066 +EMIQCV+CEDW+H +HL A +S F+E VC+ C++RC +L Y Sbjct: 150 DEMIQCVVCEDWFHGRHLGAIPPESG---DFQEMVCQACMKRCSFLWAY 195
BLAST of UBR-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8BU04|UBR7_MOUSE (Putative E3 ubiquitin-protein ligase UBR7 OS=Mus musculus OX=10090 GN=Ubr7 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.325e-25 Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 L G D++ C++ +G RQALY C TC + AGIC CS CH H L +LYTKRNFRCDCGNS F N +C+L+ +K +N NKYN NF GLYCVC Y + + Sbjct: 38 LGGSDSEK--CSYSQGSVGRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKF-KNLECKLFPDKSKVNSCNKYNDNFFGLYCVCKRPYPDPE 145 HSP 2 Score: 56.6102 bits (135), Expect = 3.570e-7 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY 1066 +EMIQCV+CEDW+H +HL A +S F+E VC+ C+ RC +L Y Sbjct: 150 DEMIQCVVCEDWFHGRHLGAIPPESG---DFQEMVCQACMRRCSFLWAY 195 HSP 3 Score: 52.373 bits (124), Expect = 7.036e-6 Identity = 34/122 (27.87%), Postives = 55/122 (45.08%), Query Frame = 2 Query: 1199 NGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYT---NDQ-EKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDKI---KRRRLEKFE 1540 + +WP +WR LC C C ++ + FL + DT+ Y NDQ D + +S+M ++L K EL ++L VV ED+ FF++ KRRR++ + Sbjct: 300 DAATYWPLNWRSKLCTCQDCMKMYGELDVLFLTDECDTVLAYENKGKNDQATDRRDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGLQ 421
BLAST of UBR-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q09329|MLO2_SCHPO (Protein mlo2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mlo2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.380e-20 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 121 CTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYD 414 CT+ GY +Q LY CLTC++ SG +C+ CS+ CHA H L DL+ KR+FRCDCG + + C L + D+ +N YNHNF G +C+C++ Y+ Sbjct: 35 CTYSMGY-LKQPLYACLTCQKASGSLNAVCYSCSISCHADHDLVDLFNKRHFRCDCGTTR-THSIPCNLRKSVDECGSENDYNHNFEGRFCICDTVYN 130
BLAST of UBR-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q54DV0|UBR7_DICDI (Putative E3 ubiquitin-protein ligase ubr7 OS=Dictyostelium discoideum OX=44689 GN=ubr7 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.653e-14 Identity = 52/151 (34.44%), Postives = 70/151 (46.36%), Query Frame = 1 Query: 109 DDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNS-NFPDN-FKCQL-----------------------------------------------WEEKDDINIKNKYNHNFSGLYCVCNSEYD 414 D+S CTF KGY Q+++ C TC+ + K G C+ CS+HCH H + +L+ KRNFRCDCG P+N FKCQL +++ +N +N YNHNF G YC C+S YD Sbjct: 98 DESICTFDKGYI-NQSVFACKTCQLSNDKLFGFCYGCSMHCHLYHDVYELFNKRNFRCDCGTKIQEPNNSFKCQLSGILKEDDNNNVNNINNSNNTTTTTTTTTTTTTTTNNNHLNDIDIGSYDKSQILNERNHYNHNFKGKYCYCDSPYD 247 HSP 2 Score: 56.6102 bits (135), Expect = 3.035e-7 Identity = 52/212 (24.53%), Postives = 87/212 (41.04%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLK--HLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCE-EPGSLSGNNG-GAFWPSDWRESLCRCASCQQLMKRDETGF--------LHNANDTIAYYYTNDQ----EKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNG-GPDKVVTTEDVHNFF 1504 E+MIQC+ CEDW+H L ++ +D F + +C CL + ++L LY + I D + C+ E G ++ N F W++ LC C C+++ K + F L N T+ N E D F + T+P L +G + K +L E + ++V+T +D+ +FF Sbjct: 250 EDMIQCIFCEDWFHENCLKLNSNVTDIPSPGEFSDLICADCLSKNQFLLLYPQIRCYIENDHIIIGD----NNNNNNNSNNSNSICKVEGGVITPNKKYDLFCKELWKDELCSCLKCKEIYKDKKVEFLFEKDENSLKKKNKTVDENLDNKPVNVFEMGQDVFSK---TLPPTQQRALIEGFSDMKEKLKELFSKKLDKNQVITKQDIQSFF 454
BLAST of UBR-type domain-containing protein vs. TrEMBL
Match: A0A0R3W7I5 (UBR-type domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6243 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.896e-34 Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 55 SFQEIYDYETRNLA----GCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + EI ET A ++++ CTFPKGY RQA++ C TC E++GK+AG+C+ CS+HCHA H + +LYTKR+FRCDCGNS F C LWEEKDD+NI+N Y+HNF G++C C Y + + Sbjct: 8 TLDEIVSSETSESAVVYGAIEDEEEKCTFPKGYLKRQAVFACKTCSELTGKRAGVCYECSIHCHATHEIVELYTKRHFRCDCGNSKFKGAAVCNLWEEKDDVNIENSYDHNFDGVFCTCLRPYPDPE 134 HSP 2 Score: 103.219 bits (256), Expect = 4.529e-20 Identity = 73/253 (28.85%), Postives = 113/253 (44.66%), Query Frame = 2 Query: 884 IYAYNSHLIQDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNL-----------EAARAALEQLGNNCEEPGSLS-----------------GNNG-----GAFWPSDWR-ESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKF-------NDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKR 1519 + Y I+ EM QC +CEDW+HL+HL SD QP + FEE VC C++R L L+ V +C+L + + AA + C P LS NG FW +DWR ++LC C SC++++K GFL + D+I +Y +++ ++ E ++ +P AI++A GI F+ L +FL VVT E+V F + +K+ Sbjct: 127 LRPYPDPEIKGNSEMYQCSVCEDWFHLQHLNMP-SDFQPSDDFEELVCSSCVKRFPLLWLFYYCHVQSGNADNANQSRDCSLAKKPRIDDGVDQMSTAASVESTETCRIPHVLSVCGVENVDPPTADMRRLTVNGLPFPSPIFWCNDWRTDTLCTCDSCEKMLKSLGIGFLLDPEDSIVHYMEVGRQRVAELHARRDNLISEALAELPRPAAIEVARGINRFREALTDFLTRPREQNVVTEEEVKEFCEDLKK 378
BLAST of UBR-type domain-containing protein vs. TrEMBL
Match: A0A5K3G4N2 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 7.754e-34 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 1 Query: 73 DYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES 420 D E + G D + +C TFP+GY RQALY C TC E++GK+AG+C+ CS+ CH H + +LYTKR+FRCDCGNSNF +C+LWEEKDD+N++NKY+ F G++CVC+ Y + Sbjct: 18 DEEVIIMGGADGEPAC-TFPRGYLKRQALYVCKTCYEVTGKRAGVCYECSLQCHCDHEVVELYTKRHFRCDCGNSNFKGASECKLWEEKDDVNVENKYDQTFDGVFCVCSRPYPDP 132 HSP 2 Score: 85.5001 bits (210), Expect = 3.878e-14 Identity = 63/241 (26.14%), Postives = 101/241 (41.91%), Query Frame = 2 Query: 923 EMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY------------------------NRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSGNN---------GGAFWPSDWRES-LCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKFNDEFKEQ-------MSTMPHAVAIKLADGIAYFKRELIEF-LNNGGPDKVVTTEDVHNFFDKIKR 1519 EM QC ICEDW+H HL D P + +EE C C++R L L R + +Y +++ N + L G + P + FWP +WR S LC C SC+ ++K + F+ + D+IA+Y +++ + E+ +S +PH+ AI +A GI + + EF L V+T E+V F D++K+ Sbjct: 139 EMFQCGICEDWFHTHHLGLP-PDFLPNDDYEELTCLNCIKRLPLLWLLYYSLMHSQEKESCVELDEEPSSKKPRRDSDICPPEYPSSNSNGEICRMPQVLANCGVDTATPSPATLQKLVVRGFSFPSPIFWPKNWRTSALCACESCRNMLKTLDIEFILDPEDSIAHYMQVGKQRVQEIQSERESAISAALSELPHSAAINIARGITKLESAIAEFLLREREKGHVITEEEVKAFCDELKK 378
BLAST of UBR-type domain-containing protein vs. TrEMBL
Match: A0A0R3WII4 (UBR-type domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS410 PE=4 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.001e-33 Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 40 EEDTISFQEIYDYETRNLA----GCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 +++ + E+ ET A ++++ CTFPKGY RQA++ C TC EI+GK+AG+C+ CS+HCHA H + +LYTKR+FRCDCGNS F C LWEEKDD+NI+NKY+H F G++C C Y + + Sbjct: 3 DDEYFTLDELVSSETSESAVVYGAIEDEEEKCTFPKGYLKRQAVFACKTCYEITGKRAGVCYECSMHCHAAHEIIELYTKRHFRCDCGNSKFKGAGVCSLWEEKDDVNIENKYDHTFDGVFCTCLRPYPDPE 134 HSP 2 Score: 83.1889 bits (204), Expect = 1.649e-13 Identity = 65/244 (26.64%), Postives = 103/244 (42.21%), Query Frame = 2 Query: 884 IYAYNSHLIQDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSGN--------------------------NG-----GAFWPSDWR-ESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKR 1519 + Y I++ EEM QC ICEDW+HL+HL D QP + FEE VC C++R +L L+ + + +C+ +A + + N E PGS NG FW +DWR ++LC C SC+++++ FL + D++ +Y +++ + + S I FK L FL VVT E+V F + +K+ Sbjct: 127 LRPYPDPEIKENEEMYQCSICEDWFHLQHLNMP-FDFQPNDDFEELVCPNCVKRFPFLWLFYYCQMQSRNAENANHFSDCS-SPKKAKPDDIINQPEAPGSTEACRVPYVLSVCGVEKLDPPPADMVRLTVNGFPFPSPIFWCNDWRTDTLCDCNSCEKMLENMGLEFLLDPEDSVVHYMAVGRQRVAELHARRES-------------ICRFKEALTNFLTKPREQNVVTEEEVKEFCEDLKK 355
BLAST of UBR-type domain-containing protein vs. TrEMBL
Match: A0A087W1E8 (E3 ubiquitin protein ligase UBR7 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000218200 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.287e-33 Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 55 SFQEIYDYETRNLA----GCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + EI ET A ++D+ CTFPKGY RQA++ C TC E++GK+AG+C+ CS++CHA H + +LYTKR+FRCDCGNS F C LWEEKDD+N +NKY+HNF G++C C Y + + Sbjct: 8 TLDEIVSSETSESAVVYGAIEDDEEKCTFPKGYLKRQAVFACKTCYELTGKRAGVCYECSMNCHAAHEIVELYTKRHFRCDCGNSKFKGAAVCNLWEEKDDVNTENKYDHNFDGVFCTCLRPYPDPE 134 HSP 2 Score: 102.834 bits (255), Expect = 4.771e-20 Identity = 71/246 (28.86%), Postives = 116/246 (47.15%), Query Frame = 2 Query: 884 IYAYNSHLIQDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY-----NRASVNKVLGKYIAADGNCN----------LEAAR-------AALEQLGNNCEEPGSLSGNN----GGAFWPSDWR-ESLCRCASCQQLMKRDETGFLHNANDTIAYYY-------TNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKR 1519 + Y ++ EM QC ICEDW+HL+HL D +P + FEE VC C++R L L+ + + L K D + N EA R +++L + G L+ N FW +DWR ++LC C SC++++K + GFL + D++ +Y Q + + E ++ +PH A+++A GI+ F+ L +FL VVT E+V F + +K+ Sbjct: 127 LRPYPDPELEGNTEMYQCSICEDWFHLQHLNMP-LDFRPNDDFEELVCLNCVKRFPLLWLFYYCQMQPKNADCSLPKKPRIDDSVNQLNTSASVKSTEACRIPHVLSVCGVKKLNPPTADMGRLTVNGLSFPSPIFWCNDWRTDTLCTCDSCKKMLKSLDIGFLLDPEDSVVHYMEVGRQRVAQLQARRENLISEALAELPHPAAVEVARGISRFREALTDFLTKPREKNVVTEEEVKEFCEDLKK 371
BLAST of UBR-type domain-containing protein vs. TrEMBL
Match: U6JE40 (E3 ubiquitin protein ligase UBR7 OS=Echinococcus granulosus OX=6210 GN=EGR_08657 PE=4 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.149e-33 Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 55 SFQEIYDYETRNLA----GCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 + EI ET A ++D+ CTFPKGY RQA++ C TC E++GK+AG+C+ CS++CHA H + +LYTKR+FRCDCGNS F C LWEEKDD+N +NKY+HNF G++C C Y + + Sbjct: 8 TLDEIVSSETSESAVVYGAIEDDEEKCTFPKGYLKRQAVFACKTCYELTGKRAGVCYECSMNCHAAHEIVELYTKRHFRCDCGNSKFKGASVCNLWEEKDDVNTENKYDHNFDGVFCTCLRPYPDPE 134 HSP 2 Score: 100.908 bits (250), Expect = 2.518e-19 Identity = 67/246 (27.24%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 884 IYAYNSHLIQDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY---------------NRASVNKVLGKYIAADGNCNLEAAR-------AALEQLGNNCEEPGSLSGNN----GGAFWPSDWR-ESLCRCASCQQLMKRDETGFLHNANDTIAYYY-------TNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKR 1519 + Y ++ EM QC ICEDW+HL+HL D +P + FEE VC C++R L L+ + ++ + + + + EA R + +L + G L+ N FW +DWR ++LC C SC++++K GFL + D++ +Y Q + + E ++ +PH A+++A GI+ F+ L +FL VVT E+V F + +K+ Sbjct: 127 LRPYPDPELEGNTEMYQCSICEDWFHLQHLNMP-LDFRPNDDFEELVCLNCVKRFPLLWLFYYCQMQPENADCSLPKKPRIDDSVDQLNTSASVKSTEACRIPHVLSVCGVRKLNPPTADMGRLTVNGFSFPSPIFWCNDWRTDTLCTCDSCKKMLKSLGIGFLLDPEDSVVHYMEVGRQRVAQLQARRENLISEALAELPHPAAVEVARGISRFREALTDFLTKPREKNVVTEEEVKEFCEDLKK 371
BLAST of UBR-type domain-containing protein vs. Ensembl Cavefish
Match: ubr7 (putative E3 ubiquitin-protein ligase UBR7 [Source:NCBI gene;Acc:103040793]) HSP 1 Score: 122.479 bits (306), Expect = 4.704e-30 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 19 MAESENLEEDTISFQEIYDY-------ETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 MA +E EE T+S ++ + + L G D++ C++P+GY RQALY C TC G+ AGIC CS CH GH L +LYTKRNFRCDCGN F + +C+L+ EK+ +N NKY+HNF GLYC C+ Y + + Sbjct: 1 MAANEGGEEATVSLVDVLEEDEELEQEASAVLGGSDSEK--CSYPEGYVKRQALYACNTCTPKGGEPAGICLACSYKCHEGHELFELYTKRNFRCDCGNDKFGE-LECKLFTEKEKVNSGNKYSHNFFGLYCTCDRPYPDPE 139 HSP 2 Score: 75.8702 bits (185), Expect = 2.062e-14 Identity = 63/258 (24.42%), Postives = 102/258 (39.53%), Query Frame = 2 Query: 917 TEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY---------------------------------NRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSG--------------NNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQ---EKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDKIKRRR 1525 ++EMIQC++CEDW H +HL + L+ E +C+ C+ + +L Y S + V K + +G + L++L N+ E GS SG G FWP+ WR LC C C+ + FL + DT+ Y T +Q + D ++T+ +++ K EL ++L KVVT ED+ NFF++ + R+ Sbjct: 143 SDEMIQCIVCEDWLHGRHLGCVVPECVELQ---EMICESCMNKSPFLWTYAAHIAVPPVLKVCKAEEAEKVDVDHVEEESKPEKEDSKSPVDDKQVEMNGT---AGCKRKLQELENSSAE-GSCSGCRLAEMKTSGQSRAQQGAVFWPAAWRAKLCSCTHCKNVFTDAGVAFLLDETDTVLAYENKGKTTEQAGGAEGRDPLMSALNTLNRVQQLEIIHEYNDMKTELKDYLQRFAAEGKVVTPEDIRNFFEQQQSRK 393
BLAST of UBR-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000015002.2 (putative E3 ubiquitin-protein ligase UBR7 [Source:NCBI gene;Acc:103039744]) HSP 1 Score: 110.923 bits (276), Expect = 4.740e-26 Identity = 58/127 (45.67%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 49 TISFQEIYDYETRN----LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDE 417 +S ++ D E R LAG D D C++ +GY RQA++ C TCR + G+C C+ HCH GH + +LYTKRNF CDCGN NF F+C+L +KD N KN YNHN+ G YC C+ Y + Sbjct: 10 AVSLVDVEDEELREALAVLAGSDPDQ--CSYQQGYMKRQAVFACNTCRTEGMEPTGVCLACANHCHDGHDIFELYTKRNFCCDCGNKNF-GTFECKLSPKKDSQNTKNVYNHNYFGRYCSCDRPYPD 133 HSP 2 Score: 83.1889 bits (204), Expect = 1.039e-16 Identity = 76/285 (26.67%), Postives = 103/285 (36.14%), Query Frame = 2 Query: 851 YIMRYSVSVVPIYAYNSHLIQDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY-----------------NRASVNKVLGKYIAADGN--------------------------------------CNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKFNDEFKEQ-MSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDKI---KRRR 1525 Y RY P Y Q EEMIQC+ICEDWYHLKHL + DS E E VC+ C+ + +L Y +V K Y DG C EAA L+ L G + G FWP WR LC C C++ FL + +DT+ Y + ++ S++ +++ K EL FL + K VT E +H FF+++ KRRR Sbjct: 120 YFGRYCSCDRP---YPDEDDQVGEEMIQCIICEDWYHLKHLGCAAVDS---EELLEMVCESCMNKAPFLWTYAAYFATPPVTSKENEDVTTPNVEKETSSYPCRDGGHAEPSTSQGCIKNPTLPNGDRTESQKRTREEMERHSSACQSEAALCKLKNLKTK----GLVRPRVGSVFWPYCWRSKLCTCTDCKRAYVEAGVQFLLDESDTVLAYENKGKSLLREDLLTSCFSSLDRVQQLEIIYQFNDMKDELNAFLRDLADQGKEVTPEAIHAFFEELQAKKRRR 394
BLAST of UBR-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ubr7 (ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]) HSP 1 Score: 55.8398 bits (133), Expect = 7.246e-9 Identity = 31/93 (33.33%), Postives = 45/93 (48.39%), Query Frame = 2 Query: 911 QDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSL 1189 + +EMIQC+ICEDW H +HL +S + E VC C+ RC +L Y S + + C+ AR ++ + N E GSL Sbjct: 49 KTPDEMIQCIICEDWLHGRHLGVEAPESV---EYHEMVCGGCMARCSFLWAYAVPSAGDTVARVARPCRRCSGTGARKVVKLV--NEEHEGSL 136 HSP 2 Score: 53.5286 bits (127), Expect = 4.219e-8 Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 1 Query: 280 CDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES 420 CDCGN+ FP C+L +K+ N NKYNHNF GLYC C Y + Sbjct: 1 CDCGNARFP-VVACKLLPDKEASNPGNKYNHNFFGLYCTCKKPYPDP 46
BLAST of UBR-type domain-containing protein vs. Ensembl Nematostella
Match: EDO38158 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDR6]) HSP 1 Score: 126.331 bits (316), Expect = 9.675e-32 Identity = 64/138 (46.38%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 25 ESENLEEDTISFQEIYDY-----ETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDESK 423 E NL ++ +S ++ E N D+DD CT+ KGY RQALY C TC S + AG+C CS+ CH GH L +LYTKRNFRCDCGNS F + F C+L+ +KD +N N YN NF+G+YC C+ Y + + Sbjct: 2 EGSNLTDEVVSMVDVLQEDNELEEEANAVFGDSDDQQCTYEKGYVGRQALYACSTCSCPSSEPAGLCLACSLTCHDGHELYELYTKRNFRCDCGNSKF-EGFNCKLFPDKDAVNKSNMYNQNFTGVYCTCHRPYPDPE 138 HSP 2 Score: 55.0694 bits (131), Expect = 3.417e-8 Identity = 31/115 (26.96%), Postives = 49/115 (42.61%), Query Frame = 2 Query: 1202 GGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYF---KRELIEFLNN-GGPDKVVTTEDVHNFFDKIKRRRLEK 1534 G +FW WR LC C C+ L FL + DT+ Y Q ++ M + I + + + K EL +FL KVV ED+ FF+ ++ R+ ++ Sbjct: 290 GASFWNVGWRAQLCTCTKCKTLYNTLGVSFLTSEQDTLVAYEARGQSARQSAYESGMQALGGMGRINQVEALHEYNNMKDELTDFLREFATQGKVVKPEDIQGFFESMQARKRQR 404 HSP 3 Score: 52.373 bits (124), Expect = 2.526e-7 Identity = 22/53 (41.51%), Postives = 33/53 (62.26%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLA----ASGSDSQPLEHFEEFVCKLCLERCEYLALY 1066 +EMIQC++CEDWYH +HL A+G ++E +C C++RC +L Y Sbjct: 143 DEMIQCIVCEDWYHSRHLGCLPPANGD-------YQEMICDSCMDRCTFLQAY 188
BLAST of UBR-type domain-containing protein vs. Ensembl Medaka
Match: ubr7 (putative E3 ubiquitin-protein ligase UBR7 [Source:NCBI gene;Acc:101174971]) HSP 1 Score: 125.946 bits (315), Expect = 1.693e-31 Identity = 62/109 (56.88%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDE 417 LAG D+D C++P GY RQALY C TC G+ AG+C CS CH GH L +LYTKRNFRCDCGN F D +C+L EKDDIN NKY+HNF G+YC C Y + Sbjct: 27 LAGSDSDH--CSYPLGYVKRQALYACNTCTPKGGEAAGVCLACSYKCHEGHELFELYTKRNFRCDCGNRKFSD-LQCKLQPEKDDINSLNKYSHNFFGVYCTCRRPYPD 132 HSP 2 Score: 93.5893 bits (231), Expect = 2.371e-20 Identity = 64/231 (27.71%), Postives = 104/231 (45.02%), Query Frame = 2 Query: 920 EEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY--------------NRASVNKVLGKYIAADGNCNLEAARAALEQLGNNC-----EEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYY----YTNDQEK-FNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNN-GGPDKVVTTEDVHNFFDK--IKRRRLE 1531 +EMIQCV+CEDW H +HL D L+ E +C+ C++R L +Y ++ K + + + + + E+ +C + G +G FWPS WR LC CASCQ ++ FL + DT+ Y T ++E+ D + + +++ G K +L +FL KVVT+ED+ FF++ KRRR++ Sbjct: 139 DEMIQCVVCEDWLHSRHLGCVVPDCVELQ---EMICEACMKRSPVLWVYAAHLAAAGPEEPKEEGPGAEEITAKSENHEKDVTEPSCKRSHEEAEPSCRLKELQAGGQKRVQSGAVFWPSGWRSKLCSCASCQLMLSEAGLSFLLDEADTVLEYENKGKTREREQPGTDPLMSALDNLSRVQQLEIIHGYNDMKTDLKDFLQRFAAEGKVVTSEDIRQFFEQQSSKRRRMD 366
BLAST of UBR-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000020014.2 (ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:NCBI gene;Acc:101157579]) HSP 1 Score: 114.005 bits (284), Expect = 5.760e-27 Identity = 56/110 (50.91%), Postives = 75/110 (68.18%), Query Frame = 1 Query: 91 LAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES 420 LAG D ++ C++ +GY RQA++ C TC + + AGIC C+ CH GH + +LYTKR+FRCDCGN F D F+CQL KD+ N KN+YNHNFSG YC C+ Y ++ Sbjct: 63 LAGSDPEN--CSYSRGYVKRQAVFACNTCTPDATEPAGICLACANKCHDGHDIFELYTKRHFRCDCGNGKFGD-FQCQLNPAKDERNDKNRYNHNFSGCYCTCDRPYPDT 169 HSP 2 Score: 87.0409 bits (214), Expect = 5.954e-18 Identity = 69/256 (26.95%), Postives = 108/256 (42.19%), Query Frame = 2 Query: 911 QDTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALY---------------------NRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEE------------PG-----SLSG----NNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKFNDEFKEQ-----MSTMPHAVAIKLADGIAYFKRELIEFLNNGGPD-KVVTTEDVHNFFDKIKRRRLEK 1534 QD +EMIQCVICEDW+H KHL + + E +E VC+ C+ + +L Y K K +G+ + + +R A +G++ + PG L G G FWP WR LC C +C++ E FL + +DTI Y ++ ++ F + +S+M +++ GI L EFL + K VT E VH FF +++ R+ + Sbjct: 172 QDDDEMIQCVICEDWFHSKHLGCTVVEP---EELQEMVCETCMNKAPFLWTYAAHFAEPPFIKISHSNKEEDVEVEVEEKSPEKRPRNEGSTSSDESRKAEAGIGSSPRKRNHPETSKVNTTPGECRLKKLQGLERPRLGAVFWPYSWRSELCTCTNCKKAYVAAEVQFLMDQSDTILAY---EKRGLDEPFGQHPLMALLSSMDRVQQLEVLYGINELTSSLNEFLEQCVSERKTVTAEAVHEFFAELRARKKRR 421
BLAST of UBR-type domain-containing protein vs. Planmine SMEST
Match: SMESG000037081.1 (SMESG000037081.1) HSP 1 Score: 432.95 bits (1112), Expect = 1.419e-149 Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 2 Query: 914 DTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNRASVNKVLGKYIAADGNCNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMKRDETGFLHNANDTIAYYYTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKRRRLEKFE 1540 DTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYN ASVNKVLGKY AADGNCNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLM+RDETGFLHNANDTIAYYYTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKRRRLEKFE Sbjct: 136 DTEEMIQCVICEDWYHLKHLAASGSDSQPLEHFEEFVCKLCLERCEYLALYNLASVNKVLGKYTAADGNCNLEAARAALEQLGNNCEEPGSLSGNNGGAFWPSDWRESLCRCASCQQLMERDETGFLHNANDTIAYYYTNDQEKFNDEFKEQMSTMPHAVAIKLADGIAYFKRELIEFLNNGGPDKVVTTEDVHNFFDKIKRRRLEKFE 344 HSP 2 Score: 284.648 bits (727), Expect = 1.179e-91 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 Query: 19 MAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES 420 MAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES Sbjct: 1 MAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRQALYHCLTCREISGKQAGICFPCSVHCHAGHVLEDLYTKRNFRCDCGNSNFPDNFKCQLWEEKDDINIKNKYNHNFSGLYCVCNSEYDES 134 The following BLAST results are available for this feature:
BLAST of UBR-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of UBR-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of UBR-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of UBR-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of UBR-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of UBR-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of UBR-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 4
BLAST of UBR-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of UBR-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of UBR-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of UBR-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of UBR-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of UBR-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of UBR-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010763 ID=SMED30010763|Name=UBR-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1606bpback to top protein sequence of SMED30010763-orf-1 >SMED30010763-orf-1 ID=SMED30010763-orf-1|Name=SMED30010763-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=155bp HLISNIMAESENLEEDTISFQEIYDYETRNLAGCDNDDSCCTFPKGYAYRback to top protein sequence of SMED30010763-orf-2 >SMED30010763-orf-2 ID=SMED30010763-orf-2|Name=SMED30010763-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=242bp MVHFIFIHSLPYIMRYSVSVVPIYAYNSHLIQDTEEMIQCVICEDWYHLKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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