BZIP domain-containing protein

Overview
NameBZIP domain-containing protein
Smed IDSMED30010749
Length (bp)1006
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of BZIP domain-containing protein (SMED30010749) t-SNE clustered cells

Violin plots show distribution of expression levels for BZIP domain-containing protein (SMED30010749) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of BZIP domain-containing protein (SMED30010749) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for BZIP domain-containing protein (SMED30010749) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30010749

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 10

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30010749SMESG000028072.1 SmedASXL_006398SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
pharynxSMED30010749SMESG000028072.1 dd_Smed_v4_6373_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30010749SMESG000028072.1 dd_Smed_v4_6373_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30010749SMESG000028072.1 dd_Smed_v4_6373_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30010749SMESG000028072.1 dd_Smed_v4_6373_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30010749SMESG000028072.1 dd_Smed_v4_6373_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30010749SMESG000028072.1 Contig52712newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30010749SMESG000028072.1 Contig52712uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
head regionSMED30010749SMESG000028072.1 dd_Smed_v6_6373_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
epidermisSMED30010749SMESG000028072.1 dd_Smed_v4_6373_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of BZIP domain-containing protein vs. Ensembl Fly
Match: REPTOR (gene:FBgn0039209 transcript:FBtr0084674)

HSP 1 Score: 51.9878 bits (123), Expect = 5.395e-7
Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  225 FWNYNASNKGPKKRYNIEFDENSFDPLSL-VYEDPI-------KEMKL--PSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHR---NILASKICRLKKKAFHESLKIKYSALGIEYAE 596
            FW YN   KGPK +  + F     DP  L    DP+       + +K+   SGK  K   +D+      L N  K  + + ++      +      + PK R   N LAS+ CRLKKKA HE+ KIK   L IE++E
Sbjct:  603 FWQYNVQAKGPKGK-RLVFQSKLEDPHVLNEVTDPVFSPTCSVRGIKVYKHSGKARKGDGNDLTPNARKLHNIGKELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIEHSE 738
[Close]
BLAST of BZIP domain-containing protein vs. Ensembl Fly
Match: REPTOR (gene:FBgn0039209 transcript:FBtr0345204)

HSP 1 Score: 51.9878 bits (123), Expect = 5.395e-7
Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  225 FWNYNASNKGPKKRYNIEFDENSFDPLSL-VYEDPI-------KEMKL--PSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHR---NILASKICRLKKKAFHESLKIKYSALGIEYAE 596
            FW YN   KGPK +  + F     DP  L    DP+       + +K+   SGK  K   +D+      L N  K  + + ++      +      + PK R   N LAS+ CRLKKKA HE+ KIK   L IE++E
Sbjct:  603 FWQYNVQAKGPKGK-RLVFQSKLEDPHVLNEVTDPVFSPTCSVRGIKVYKHSGKARKGDGNDLTPNARKLHNIGKELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIEHSE 738
[Close]
BLAST of BZIP domain-containing protein vs. Ensembl Fly
Match: REPTOR (gene:FBgn0039209 transcript:FBtr0084672)

HSP 1 Score: 51.9878 bits (123), Expect = 5.395e-7
Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  225 FWNYNASNKGPKKRYNIEFDENSFDPLSL-VYEDPI-------KEMKL--PSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHR---NILASKICRLKKKAFHESLKIKYSALGIEYAE 596
            FW YN   KGPK +  + F     DP  L    DP+       + +K+   SGK  K   +D+      L N  K  + + ++      +      + PK R   N LAS+ CRLKKKA HE+ KIK   L IE++E
Sbjct:  603 FWQYNVQAKGPKGK-RLVFQSKLEDPHVLNEVTDPVFSPTCSVRGIKVYKHSGKARKGDGNDLTPNARKLHNIGKELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIEHSE 738
[Close]
BLAST of BZIP domain-containing protein vs. Ensembl Fly
Match: REPTOR (gene:FBgn0039209 transcript:FBtr0084675)

HSP 1 Score: 51.9878 bits (123), Expect = 5.395e-7
Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  225 FWNYNASNKGPKKRYNIEFDENSFDPLSL-VYEDPI-------KEMKL--PSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHR---NILASKICRLKKKAFHESLKIKYSALGIEYAE 596
            FW YN   KGPK +  + F     DP  L    DP+       + +K+   SGK  K   +D+      L N  K  + + ++      +      + PK R   N LAS+ CRLKKKA HE+ KIK   L IE++E
Sbjct:  603 FWQYNVQAKGPKGK-RLVFQSKLEDPHVLNEVTDPVFSPTCSVRGIKVYKHSGKARKGDGNDLTPNARKLHNIGKELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIEHSE 738
[Close]
BLAST of BZIP domain-containing protein vs. Ensembl Fly
Match: REPTOR (gene:FBgn0039209 transcript:FBtr0084673)

HSP 1 Score: 51.9878 bits (123), Expect = 5.395e-7
Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  225 FWNYNASNKGPKKRYNIEFDENSFDPLSL-VYEDPI-------KEMKL--PSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHR---NILASKICRLKKKAFHESLKIKYSALGIEYAE 596
            FW YN   KGPK +  + F     DP  L    DP+       + +K+   SGK  K   +D+      L N  K  + + ++      +      + PK R   N LAS+ CRLKKKA HE+ KIK   L IE++E
Sbjct:  603 FWQYNVQAKGPKGK-RLVFQSKLEDPHVLNEVTDPVFSPTCSVRGIKVYKHSGKARKGDGNDLTPNARKLHNIGKELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIEHSE 738
[Close]
BLAST of BZIP domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9VC61|CRERF_DROME (Protein CREBRF homolog OS=Drosophila melanogaster OX=7227 GN=REPTOR PE=1 SV=2)

HSP 1 Score: 51.9878 bits (123), Expect = 5.408e-6
Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 3 
Query:  225 FWNYNASNKGPKKRYNIEFDENSFDPLSL-VYEDPI-------KEMKL--PSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHR---NILASKICRLKKKAFHESLKIKYSALGIEYAE 596
            FW YN   KGPK +  + F     DP  L    DP+       + +K+   SGK  K   +D+      L N  K  + + ++      +      + PK R   N LAS+ CRLKKKA HE+ KIK   L IE++E
Sbjct:  603 FWQYNVQAKGPKGK-RLVFQSKLEDPHVLNEVTDPVFSPTCSVRGIKVYKHSGKARKGDGNDLTPNARKLHNIGKELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIEHSE 738
[Close]
BLAST of BZIP domain-containing protein vs. TrEMBL
Match: A0A158QIH2 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS9348 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.868e-10
Identity = 69/225 (30.67%), Postives = 90/225 (40.00%), Query Frame = 3 
Query:  180 NSFSVSNNQLATSSSFWNYNASNKGPKKRYNIE-----------------FDENSFDPLSLVYEDPIKEMKLPSGKLV------KKRNSDVNCTKPN-------LPNFIKIR----------------NNIVKSTQSYKQLIHKHGR----------------ISP---------KHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKML 641
            NS    N  + TS+ FW YNA  KGPK    I                  +D NS   +S V    I    LP   LV      +KRN  V+C+K          PN +++R                  I+ +  S    ++  G                 ++P         + +N LASKICRLKKKAFHES KIKY+ LG+EY E+  L   I   KKM 
Sbjct:  253 NSSVTGNGAITTSAYFWQYNAQCKGPKAVRLINGGANSPPSTSTSPPSSCYDGNSSLGISGVGNCSIAAHSLPQYPLVVFEDPVQKRNDLVHCSKLRRGDGNDVTPNILRLRSMGDELDRLAAQITRQGEIIMAGGSSAGSVNSGGTDLSGLLQSNSGYDMDSVAPPSWRVEEAKREKNKLASKICRLKKKAFHESNKIKYTGLGLEYKELASL---ITSLKKMF 474
[Close]
BLAST of BZIP domain-containing protein vs. TrEMBL
Match: A0A564YYR4 (Uncharacterized protein (Fragment) OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS10192 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.206e-10
Identity = 67/225 (29.78%), Postives = 92/225 (40.89%), Query Frame = 3 
Query:  180 NSFSVSNNQLATSSSFWNYNASNKGPKKRYNIE-----------------FDENSFDPLSLVYEDPIKEMKLPSGKLV------KKRNSDVNCTKPN-------LPNFIKIR----------------NNIVKSTQSYKQLIHKHGR----------------ISP---------KHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKML 641
            NS    N  ++TS+ FW YNA  KGPK    I                  +D +S   ++ V    I    LP   LV      +KRN  V+C+K          PN +++R                  I+ +  S    ++  G                 ++P         + +N LASKICRLKKKAFHES KIKY+ LG+EY E+  L   I   KKM+
Sbjct:    4 NSSVTGNGAISTSAYFWQYNAQCKGPKAVRLINGGANSPLSTSTSPLSSCYDGSSGLGINGVGNCSIAAHSLPQYPLVVFEDPVQKRNDLVHCSKLRRGDGNDVTPNILRLRSMGDELDRLAAQITRQGEIIMAGGSSAGSVNSGGTDLNGLLQSNSGYEMDAVAPPTWRVEEAKREKNKLASKICRLKKKAFHESNKIKYTGLGLEYKELASL---ITSLKKMI 225
[Close]
BLAST of BZIP domain-containing protein vs. TrEMBL
Match: A0A158QVD8 (Uncharacterized protein (Fragment) OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS7723 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.259e-9
Identity = 71/237 (29.96%), Postives = 93/237 (39.24%), Query Frame = 3 
Query:  171 TLENSFSVSNNQ-------LATSSSFWNYNASNKGPKKRYNIEFDENS-----FDPLSLVYED-------------PIKEMKLPSGKLV------KKRNSDVNCTKPN-------LPNFIKIRNNIVKSTQSYKQLIHKHGRI------------------------------------------SPKHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKML 641
            TLE + S+S+N        + T + FW YNA  KGPK    I    NS       PLS  Y+               I    LP   LV      +KRN  V+C+K          PN +++R+ +          I + G I                                          + + +N LASKICRLKKKAFHES KIKY+ LG+EY E+  L   I   KKM+
Sbjct:  139 TLEETASISSNSSVTGAGAITTCAYFWQYNAQCKGPKAVRLISGGTNSPLSSATSPLSSCYDGGGGGTSMANVGNCSIAVHSLPQYPLVVFEDPVQKRNDLVHCSKLRRGDGNDVTPNIMRLRS-MGDELDRLAAQITRQGEIIMAGGGGGGGAGGGGTEMPGVVRSAPFDLETVGPPPSWRVEEAKREKNKLASKICRLKKKAFHESNKIKYTGLGLEYKELANL---ITSLKKMI 371
[Close]
BLAST of BZIP domain-containing protein vs. TrEMBL
Match: A0A5K3EZK3 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.383e-9
Identity = 71/237 (29.96%), Postives = 92/237 (38.82%), Query Frame = 3 
Query:  171 TLENSFSVSNNQLATSSS-------FWNYNASNKGPKKRYNIEFDENS-----FDPLSLVYED-------------PIKEMKLPSGKLV------KKRNSDVNCTKPN-------LPNFIKIRNNIVKSTQSYKQLIHKHGRI------------------------------------------SPKHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKML 641
            TLE + S+S+N   T +        FW YNA  KGPK    I    NS       PLS  Y+               I    LP   LV      +KRN  V+C+K          PN +++R+ +          I + G I                                          + + +N LASKICRLKKKAFHES KIKY+ LG+EY E+  L   I   KKM+
Sbjct:  245 TLEETASISSNSSVTGAGAITTCAYFWQYNAQCKGPKAVRLISGGTNSPLSSATSPLSSCYDGGGGGTSMANVGNCSIAVHSLPQYPLVVFEDPVQKRNDLVHCSKLRRGDGNDVTPNIMRLRS-MGDELDRLAAQITRQGEIIMAGGGGGGGAGGGGTEMPGVVRSAPFDLETVGPPPSWRVEEAKREKNKLASKICRLKKKAFHESNKIKYTGLGLEYKELANL---ITSLKKMI 477
[Close]
BLAST of BZIP domain-containing protein vs. TrEMBL
Match: A0A068YHW3 (Uncharacterized protein OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000949000 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 3.069e-8
Identity = 67/232 (28.88%), Postives = 95/232 (40.95%), Query Frame = 3 
Query:  171 TLENSFSVSNNQ-------LATSSSFWNYNASNKGPKKRYNIE-----------------FDENSFDPLSLVYEDPIKEMKLPSGKLV------KKRNSDVNCTKPN-------LPNFIKIRNNIVKSTQSYKQLIHKH------------------GRISPKHR--------------------NILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKML 641
            +LE + S+S+N        +A S+ FW YNA  KGPK    I                  +D +S   ++ V    +    +P   LV      +KRN  V+C+K          PN +++R+   +  +   Q+  +                   G + P  R                    N LASKICRLKKKAFHES KIKY+ LG+EY E+  L   I   KKM+
Sbjct:  297 SLEETASISSNGSVTGVGGIAPSAYFWQYNAQCKGPKAVRLINGGANSPLSTSTSPLSSCYDGSSSFGVTGVGNCSVAAHSMPQYPLVVFEDPVQKRNDLVHCSKLRRGDGNDVTPNILRLRSMGDELDRLSAQITRQGEIIMAGGGGVGGTAGGDLGALLPSSRFDMEAVAPPSWRVEEAKREKNKLASKICRLKKKAFHESNKIKYTGLGLEYKELASL---ITSLKKMI 525
[Close]
BLAST of BZIP domain-containing protein vs. Planmine SMEST
Match: SMESG000028072.1 (SMESG000028072.1)

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 294/296 (99.32%), Postives = 294/296 (99.32%), Query Frame = 3 
Query:   60 MNKERLQYLPPVDSLIYSNNSYFYKESFEILDKIEDITLENSFSVSNNQLATSSSFWNYNASNKGPKKRYNIEFDENSFDPLSLVYEDPIKEMKLPSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKMLFPLXXXXXXXXXDEIHLIRAAGRLDDFIMDLVSAMDVGDLENSQINKLRTFNPEDDRIRKFEYSFNEEIDDSHELNFLIEEGFINDFLNSSGSTSFSDDFIY 947
            MNKERLQYLPPVDSLIYS NSYFYKESFEILDKIEDITLENSFSVSNNQLATSSSFWNYNASNKGPKKRYNIEFDENSFDPLSLVYEDPIKEMKL SGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKMLFPLSKKSISKKIDEIHLIRAAGRLDDFIMDLVSAMDVGDLENSQINKLRTFNPEDDRIRKFEYSFNEEIDDSHELNFLIEEGFINDFLNSSGSTSFSDDFIY
Sbjct:    1 MNKERLQYLPPVDSLIYSKNSYFYKESFEILDKIEDITLENSFSVSNNQLATSSSFWNYNASNKGPKKRYNIEFDENSFDPLSLVYEDPIKEMKLSSGKLVKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHRNILASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKMLFPLSKKSISKKIDEIHLIRAAGRLDDFIMDLVSAMDVGDLENSQINKLRTFNPEDDRIRKFEYSFNEEIDDSHELNFLIEEGFINDFLNSSGSTSFSDDFIY 296
The following BLAST results are available for this feature:
BLAST of BZIP domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
REPTOR5.395e-733.58gene:FBgn0039209 transcript:FBtr0084674[more]
REPTOR5.395e-733.58gene:FBgn0039209 transcript:FBtr0345204[more]
REPTOR5.395e-733.58gene:FBgn0039209 transcript:FBtr0084672[more]
REPTOR5.395e-733.58gene:FBgn0039209 transcript:FBtr0084675[more]
REPTOR5.395e-733.58gene:FBgn0039209 transcript:FBtr0084673[more]
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BLAST of BZIP domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9VC61|CRERF_DROME5.408e-633.58Protein CREBRF homolog OS=Drosophila melanogaster ... [more]
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BLAST of BZIP domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A158QIH21.868e-1030.67Uncharacterized protein OS=Rodentolepis nana OX=10... [more]
A0A564YYR43.206e-1029.78Uncharacterized protein (Fragment) OS=Hymenolepis ... [more]
A0A158QVD82.259e-929.96Uncharacterized protein (Fragment) OS=Mesocestoide... [more]
A0A5K3EZK32.383e-929.96Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A068YHW33.069e-828.88Uncharacterized protein OS=Echinococcus multilocul... [more]
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BLAST of BZIP domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of BZIP domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000028072.10.000e+099.32SMESG000028072.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30010749 ID=SMED30010749|Name=BZIP domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1006bp
TAGAAACTTAATTTAATAATATTTAAAGTGTTTCAAGGAACATTTAGGAT
AAGATTTTAATGAATAAAGAAAGGTTGCAGTATTTACCACCGGTTGACTC
ATTAATTTATTCCAATAATTCATATTTTTATAAAGAGAGTTTTGAAATAT
TAGACAAAATTGAAGACATAACATTAGAAAATTCATTTTCAGTGTCAAAT
AACCAATTAGCTACCTCATCAAGCTTTTGGAATTATAACGCCAGCAACAA
GGGGCCTAAGAAAAGATACAATATTGAATTTGATGAAAATAGTTTTGATC
CTTTAAGTTTGGTTTACGAAGATCCCATAAAAGAAATGAAATTGCCGTCT
GGAAAATTAGTAAAGAAGAGAAACAGTGATGTTAATTGTACCAAACCAAA
TCTTCCTAATTTCATCAAAATTCGAAACAATATTGTCAAATCAACACAAT
CTTATAAGCAGCTTATTCATAAGCATGGCAGAATTTCCCCAAAGCACAGA
AATATTCTCGCGAGCAAAATATGTCGGTTAAAGAAAAAAGCATTTCACGA
ATCTTTGAAAATTAAATATTCGGCTTTGGGAATTGAATATGCGGAAATAA
TAGAATTACTGGATTGGATAAATTATTACAAAAAAATGCTATTTCCTCTG
TCTAAGAAAAGTATCAGTAAAAAAATTGATGAAATTCATCTGATTCGAGC
TGCAGGTCGATTAGATGATTTCATCATGGACTTGGTGAGTGCCATGGATG
TCGGGGACCTGGAAAACTCACAAATCAACAAATTGAGAACATTCAACCCA
GAAGATGACCGGATCCGCAAATTTGAATACAGTTTCAATGAAGAAATTGA
TGATAGTCATGAGCTGAATTTTCTAATTGAAGAAGGTTTTATAAATGACT
TTTTGAACTCTTCAGGAAGCACTTCATTCTCAGATGACTTTATTTATTAA
ACTTTTGCATATTTTATACTCAGATTCGTTTTATATACAAAATTATTAAC
AACCAG
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protein sequence of SMED30010749-orf-1

>SMED30010749-orf-1 ID=SMED30010749-orf-1|Name=SMED30010749-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=297bp
MNKERLQYLPPVDSLIYSNNSYFYKESFEILDKIEDITLENSFSVSNNQL
ATSSSFWNYNASNKGPKKRYNIEFDENSFDPLSLVYEDPIKEMKLPSGKL
VKKRNSDVNCTKPNLPNFIKIRNNIVKSTQSYKQLIHKHGRISPKHRNIL
ASKICRLKKKAFHESLKIKYSALGIEYAEIIELLDWINYYKKMLFPLSKK
SISKKIDEIHLIRAAGRLDDFIMDLVSAMDVGDLENSQINKLRTFNPEDD
RIRKFEYSFNEEIDDSHELNFLIEEGFINDFLNSSGSTSFSDDFIY*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0006986response to unfolded protein
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000034epidermis
PLANA:0000099neuron
PLANA:0000418head
PLANA:0002032epidermal cell
Vocabulary: molecular function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding