TIA-1-related RNA binding protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010729 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of TIA-1-related RNA binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 217.238 bits (552), Expect = 6.753e-66 Identity = 119/288 (41.32%), Postives = 173/288 (60.07%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ +N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +++HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
BLAST of TIA-1-related RNA binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 214.927 bits (546), Expect = 7.407e-65 Identity = 119/292 (40.75%), Postives = 174/292 (59.59%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA---SGSQNPASNITNVKVDYSKA-IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA S + S+ T V S+ +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ +N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +++HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
BLAST of TIA-1-related RNA binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 214.542 bits (545), Expect = 7.768e-65 Identity = 119/292 (40.75%), Postives = 174/292 (59.59%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA---SGSQNPASNITNVKVDYSKA-IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA S + S+ T V S+ +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ +N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +++HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
BLAST of TIA-1-related RNA binding protein vs. Ensembl Human
Match: TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:11804]) HSP 1 Score: 209.534 bits (532), Expect = 6.048e-63 Identity = 116/289 (40.14%), Postives = 169/289 (58.48%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D + +YVGNL ++T+ L+L +F G C C ++ + + +PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ +E V ++ N VY GI LT++L+R F FG+I ++VFP+K Y+F+ +STHE+AA AI +G I +VVKC WGKE+ Sbjct: 1 MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN-DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLR---FEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278 HSP 2 Score: 87.8113 bits (216), Expect = 2.733e-18 Identity = 54/202 (26.73%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN------------VKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQ 606 D +N+ ++VG+L EIT + + + F FG+ +++D +G+ Y F+ F A A+ M L G Q++ NWA+ + PA T V K ++ G I + +Q+++ FS FG I++++V +P+ KG++F+ F+ + A +AI S++ T + +KC W + + F+Q Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT-RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 287 HSP 3 Score: 53.1434 bits (126), Expect = 5.597e-7 Identity = 28/96 (29.17%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSK 339 N +Y G + +TDQL+ F FGQ + + + Y+F+ F+ H++A+ A+ +N ++ GH +K W G ++P +VDYS+ Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW--GKESPDMTKNFQQVDYSQ 292
BLAST of TIA-1-related RNA binding protein vs. Ensembl Human
Match: TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:11804]) HSP 1 Score: 202.986 bits (515), Expect = 2.451e-60 Identity = 118/305 (38.69%), Postives = 171/305 (56.07%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF--SGQIN--------------PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D + +YVGNL ++T+ L+L +F G C C ++ + S ++N PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ +E V ++ N VY GI LT++L+R F FG+I ++VFP+K Y+F+ +STHE+AA AI +G I +VVKC WGKE+ Sbjct: 1 MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLR---FEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 295 HSP 2 Score: 88.1965 bits (217), Expect = 2.410e-18 Identity = 54/202 (26.73%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN------------VKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQ 606 D +N+ ++VG+L EIT + + + F FG+ +++D +G+ Y F+ F A A+ M L G Q++ NWA+ + PA T V K ++ G I + +Q+++ FS FG I++++V +P+ KG++F+ F+ + A +AI S++ T + +KC W + + F+Q Sbjct: 109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT-RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 304 HSP 3 Score: 53.1434 bits (126), Expect = 5.125e-7 Identity = 28/96 (29.17%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSK 339 N +Y G + +TDQL+ F FGQ + + + Y+F+ F+ H++A+ A+ +N ++ GH +K W G ++P +VDYS+ Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW--GKESPDMTKNFQQVDYSQ 309
BLAST of TIA-1-related RNA binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 207.994 bits (528), Expect = 1.652e-62 Identity = 104/274 (37.96%), Postives = 161/274 (58.76%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGK 873 + +YVGNL +T+ + T+F G ++ F G +PYAF+EF++H AS A+ MN L ++KVNWA S K+D ++ +FVGD+ +V+ Q L++AF FG + D KV+R + +SKG+ F+S+ R++AE AI M+ WL RTI+ NWATR D+E+ Y + Y+ +Y + NT+VYV I +LTE+ +R F FGRI V++F + YAF+ + +AAA+AI Q + + +V+C+WGK Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI--FDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQS-----KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 311 HSP 2 Score: 76.2554 bits (186), Expect = 8.078e-15 Identity = 48/188 (25.53%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS---GSQNPASNITNVKVD--YSKA----IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 +D T + ++VG+L E+ +Q L F FG ++RD + + Y F+ + + + A A+ MN L ++ NWA+ G Q S+ D Y++ ++VG+I + E ++ F+ FG I +V++ + +G+AF+ F N+ A AI M+ + + ++C+W Sbjct: 129 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM-----QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 310
BLAST of TIA-1-related RNA binding protein vs. Ensembl Celegans
Match: tiar-2 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q9U2F5]) HSP 1 Score: 186.422 bits (472), Expect = 5.763e-54 Identity = 102/300 (34.00%), Postives = 164/300 (54.67%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPD-GQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN------------------GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPS 897 + ++V NL ITD+ L T+F G + I+ F G +PYAF+EF++H A+LA+ N L ++ V WA + P N + K + S+ +FVGD+ +++ L++AF +FG + + K++R + + KG+ F+S+ R+DAE AI M+ WL RTI+ NWATR G +++ + + Y+ ++ +A NT+VYV I NL E+ +R F+ FG I+ V+ F + YAF+ + T E+AARAI Q + I +V+C+WGK PS Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKII--FEGLNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRS--KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIA-NLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKSGDSGKPS 334
BLAST of TIA-1-related RNA binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 168.703 bits (426), Expect = 7.266e-48 Identity = 90/274 (32.85%), Postives = 142/274 (51.82%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGK 873 + +YVGNL +T+ + T+F G ++ D ++KVNWA S K+D ++ +FVGD+ +V+ Q L++AF FG + D KV+R + +SKG+ F+S+ R++AE AI M+ WL RTI+ NWATR D+E+ Y + Y+ +Y + NT+VYV I +LTE+ +R F FGRI V++F + YAF+ + +AAA+AI Q + + +V+C+WGK Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD----------------------------------EMKVNWAVEPGQQQS-----KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 279 HSP 2 Score: 76.6406 bits (187), Expect = 5.315e-15 Identity = 48/188 (25.53%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS---GSQNPASNITNVKVD--YSKA----IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 +D T + ++VG+L E+ +Q L F FG ++RD + + Y F+ + + + A A+ MN L ++ NWA+ G Q S+ D Y++ ++VG+I + E ++ F+ FG I +V++ + +G+AF+ F N+ A AI M+ + + ++C+W Sbjct: 97 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM-----QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 278
BLAST of TIA-1-related RNA binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 163.696 bits (413), Expect = 8.493e-47 Identity = 83/214 (38.79%), Postives = 127/214 (59.35%), Query Frame = 1 Query: 235 MNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGK 873 MN L ++KVNWA S K+D ++ +FVGD+ +V+ Q L++AF FG + D KV+R + +SKG+ F+S+ R++AE AI M+ WL RTI+ NWATR D+E+ Y + Y+ +Y + NT+VYV I +LTE+ +R F FGRI V++F + YAF+ + +AAA+AI Q + + +V+C+WGK Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQS-----KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 208 HSP 2 Score: 76.6406 bits (187), Expect = 2.985e-15 Identity = 48/188 (25.53%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS---GSQNPASNITNVKVD--YSKA----IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 +D T + ++VG+L E+ +Q L F FG ++RD + + Y F+ + + + A A+ MN L ++ NWA+ G Q S+ D Y++ ++VG+I + E ++ F+ FG I +V++ + +G+AF+ F N+ A AI M+ + + ++C+W Sbjct: 26 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM-----QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 207
BLAST of TIA-1-related RNA binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 160.229 bits (404), Expect = 1.410e-45 Identity = 80/204 (39.22%), Postives = 123/204 (60.29%), Query Frame = 1 Query: 265 LKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGK 873 +KVNWA S K+D ++ +FVGD+ +V+ Q L++AF FG + D KV+R + +SKG+ F+S+ R++AE AI M+ WL RTI+ NWATR D+E+ Y + Y+ +Y + NT+VYV I +LTE+ +R F FGRI V++F + YAF+ + +AAA+AI Q + + +V+C+WGK Sbjct: 1 MKVNWAVEPGQQQS-----KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 198 HSP 2 Score: 76.6406 bits (187), Expect = 2.517e-15 Identity = 48/188 (25.53%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS---GSQNPASNITNVKVD--YSKA----IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 +D T + ++VG+L E+ +Q L F FG ++RD + + Y F+ + + + A A+ MN L ++ NWA+ G Q S+ D Y++ ++VG+I + E ++ F+ FG I +V++ + +G+AF+ F N+ A AI M+ + + ++C+W Sbjct: 16 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM-----QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 197
BLAST of TIA-1-related RNA binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084592) HSP 1 Score: 206.453 bits (524), Expect = 4.005e-61 Identity = 112/305 (36.72%), Postives = 170/305 (55.74%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQ--------------------FKQYTPRPYELVYKEAPLTNTNVYVAGITEN-LTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFG 885 MD + K +YVGNL +++ LL+ +F G C I+R+ +PYAFIE++ +QAA+ A+ MN ++KVNWA+ N K D S IFVGD+ ++ + L++AF+ FG I + ++VR P +SKG+AF+SF + +AENAI +M+ W+ +R+I+ NW+TR + K +E VY ++ TNT VY G N ++++L+ HF +FG I V+VF DK ++FI + T EAAA AI H +++ N+VKC WGKEN G Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN--DPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN------QPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297 HSP 2 Score: 77.7962 bits (190), Expect = 4.132e-15 Identity = 54/214 (25.23%), Postives = 91/214 (42.52%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN-----------------VKVDYSKAIQ------------IFVGDIGLDV-NEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTD 588 D +++ I+VG+L EI + L F FG+ C I+RD + + YAF+ F + A A+ MN + ++ NW++ P + VK + ++ G +V ++ ++ F QFG I DV+V + KGF+F+ F ++ A +AI H + +H +KC W NG D Sbjct: 90 DISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFK-----DKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
BLAST of TIA-1-related RNA binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084594) HSP 1 Score: 206.453 bits (524), Expect = 4.005e-61 Identity = 112/305 (36.72%), Postives = 170/305 (55.74%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQ--------------------FKQYTPRPYELVYKEAPLTNTNVYVAGITEN-LTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFG 885 MD + K +YVGNL +++ LL+ +F G C I+R+ +PYAFIE++ +QAA+ A+ MN ++KVNWA+ N K D S IFVGD+ ++ + L++AF+ FG I + ++VR P +SKG+AF+SF + +AENAI +M+ W+ +R+I+ NW+TR + K +E VY ++ TNT VY G N ++++L+ HF +FG I V+VF DK ++FI + T EAAA AI H +++ N+VKC WGKEN G Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN--DPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN------QPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297 HSP 2 Score: 77.7962 bits (190), Expect = 4.132e-15 Identity = 54/214 (25.23%), Postives = 91/214 (42.52%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN-----------------VKVDYSKAIQ------------IFVGDIGLDV-NEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTD 588 D +++ I+VG+L EI + L F FG+ C I+RD + + YAF+ F + A A+ MN + ++ NW++ P + VK + ++ G +V ++ ++ F QFG I DV+V + KGF+F+ F ++ A +AI H + +H +KC W NG D Sbjct: 90 DISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFK-----DKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
BLAST of TIA-1-related RNA binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333200) HSP 1 Score: 206.453 bits (524), Expect = 4.013e-61 Identity = 112/305 (36.72%), Postives = 170/305 (55.74%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQ--------------------FKQYTPRPYELVYKEAPLTNTNVYVAGITEN-LTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFG 885 MD + K +YVGNL +++ LL+ +F G C I+R+ +PYAFIE++ +QAA+ A+ MN ++KVNWA+ N K D S IFVGD+ ++ + L++AF+ FG I + ++VR P +SKG+AF+SF + +AENAI +M+ W+ +R+I+ NW+TR + K +E VY ++ TNT VY G N ++++L+ HF +FG I V+VF DK ++FI + T EAAA AI H +++ N+VKC WGKEN G Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN--DPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN------QPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297 HSP 2 Score: 77.7962 bits (190), Expect = 4.213e-15 Identity = 54/214 (25.23%), Postives = 91/214 (42.52%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN-----------------VKVDYSKAIQ------------IFVGDIGLDV-NEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTD 588 D +++ I+VG+L EI + L F FG+ C I+RD + + YAF+ F + A A+ MN + ++ NW++ P + VK + ++ G +V ++ ++ F QFG I DV+V + KGF+F+ F ++ A +AI H + +H +KC W NG D Sbjct: 90 DISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFK-----DKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
BLAST of TIA-1-related RNA binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333202) HSP 1 Score: 206.453 bits (524), Expect = 4.013e-61 Identity = 112/305 (36.72%), Postives = 170/305 (55.74%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQ--------------------FKQYTPRPYELVYKEAPLTNTNVYVAGITEN-LTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFG 885 MD + K +YVGNL +++ LL+ +F G C I+R+ +PYAFIE++ +QAA+ A+ MN ++KVNWA+ N K D S IFVGD+ ++ + L++AF+ FG I + ++VR P +SKG+AF+SF + +AENAI +M+ W+ +R+I+ NW+TR + K +E VY ++ TNT VY G N ++++L+ HF +FG I V+VF DK ++FI + T EAAA AI H +++ N+VKC WGKEN G Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN--DPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN------QPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297 HSP 2 Score: 77.7962 bits (190), Expect = 4.213e-15 Identity = 54/214 (25.23%), Postives = 91/214 (42.52%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN-----------------VKVDYSKAIQ------------IFVGDIGLDV-NEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTD 588 D +++ I+VG+L EI + L F FG+ C I+RD + + YAF+ F + A A+ MN + ++ NW++ P + VK + ++ G +V ++ ++ F QFG I DV+V + KGF+F+ F ++ A +AI H + +H +KC W NG D Sbjct: 90 DISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFK-----DKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
BLAST of TIA-1-related RNA binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333201) HSP 1 Score: 206.453 bits (524), Expect = 4.013e-61 Identity = 112/305 (36.72%), Postives = 170/305 (55.74%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQ--------------------FKQYTPRPYELVYKEAPLTNTNVYVAGITEN-LTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFG 885 MD + K +YVGNL +++ LL+ +F G C I+R+ +PYAFIE++ +QAA+ A+ MN ++KVNWA+ N K D S IFVGD+ ++ + L++AF+ FG I + ++VR P +SKG+AF+SF + +AENAI +M+ W+ +R+I+ NW+TR + K +E VY ++ TNT VY G N ++++L+ HF +FG I V+VF DK ++FI + T EAAA AI H +++ N+VKC WGKEN G Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN--DPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN------QPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297 HSP 2 Score: 77.7962 bits (190), Expect = 4.213e-15 Identity = 54/214 (25.23%), Postives = 91/214 (42.52%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN-----------------VKVDYSKAIQ------------IFVGDIGLDV-NEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTD 588 D +++ I+VG+L EI + L F FG+ C I+RD + + YAF+ F + A A+ MN + ++ NW++ P + VK + ++ G +V ++ ++ F QFG I DV+V + KGF+F+ F ++ A +AI H + +H +KC W NG D Sbjct: 90 DISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFK-----DKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGD 298
BLAST of TIA-1-related RNA binding protein vs. Ensembl Zebrafish
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]) HSP 1 Score: 220.705 bits (561), Expect = 2.091e-67 Identity = 115/287 (40.07%), Postives = 173/287 (60.28%), Query Frame = 1 Query: 34 LMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 +MD K +YVGNL ++T+ L++ +FG G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ +P+S K D S +FVGD+ ++ ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E K + ++ V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +++HE+AA AI +G + ++VKC WGKE Sbjct: 1 MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWAT---SPSSQ----KKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLS---FDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKE 276
BLAST of TIA-1-related RNA binding protein vs. Ensembl Zebrafish
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]) HSP 1 Score: 218.779 bits (556), Expect = 1.212e-66 Identity = 114/280 (40.71%), Postives = 170/280 (60.71%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 KC YVGNL ++T+ L++ +FG G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ +P+S K D S +FVGD+ ++ ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E K + ++ V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +++HE+AA AI +G + ++VKC WGKE Sbjct: 8 KCRYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWAT---SPSSQ----KKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLS---FDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKE 276 HSP 2 Score: 86.2705 bits (212), Expect = 5.714e-18 Identity = 55/190 (28.95%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNI---TNVK-VDYSKAIQ--------IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 D +N+ ++VG+L EIT + F FG+ +++D +G+ Y F+ F A A+ M L G Q++ NWA+ + PA TN K + + + + ++ G + + EQ+++ FS FG I++V+V +PD KG++F+ F + + A +AI S++ T L +KC W Sbjct: 91 DTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT-RKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRV--FPD---KGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWG 274
BLAST of TIA-1-related RNA binding protein vs. Ensembl Zebrafish
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 207.608 bits (527), Expect = 8.909e-63 Identity = 112/286 (39.16%), Postives = 167/286 (58.39%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPR---PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 +MD + +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF E++ A+ A+A MN + G +KVNWAS P+S K D S +FVGD+ +++ ++ AF+ FG I D +VVR G+SKG+ F+SF N+ DAE+AI M+ WL R I+ NWATR + + + YE V ++ +N VY GI L+++L+R F FG+I ++VFP+K Y+F+ + +HE AA AI +G I + VKC WGKE Sbjct: 1 MMMDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGN-DPYCFVEFYENRHAAAALAAMNGRKILGKDMKVNWAS---TPSSQ----KKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKE 278 HSP 2 Score: 90.1225 bits (222), Expect = 1.804e-19 Identity = 58/211 (27.49%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQ--------------IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYE 627 D +N+ ++VG+L EI+ + F FG+ ++RD +G+ Y FI F A A+ MN L G Q++ NWA+ + P++ +N + SK + ++ G I +++Q+++ FS FG I++++V +P+ KG++F+ F + + A +AI S++ T + T+KC W T + + Q P P + Sbjct: 92 DTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWAT--RKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKE--TADMRSMQQMPMPQQ 293
BLAST of TIA-1-related RNA binding protein vs. Ensembl Zebrafish
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 206.068 bits (523), Expect = 3.062e-62 Identity = 111/286 (38.81%), Postives = 167/286 (58.39%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPR---PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 +MD + +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF E++ A+ A+A MN + G +KVNWAS P+S K D S +FVGD+ +++ ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAE+AI M+ WL R I+ NWATR + + + YE V ++ +N VY GI L+++L+R F FG+I ++VFP+K Y+F+ + +HE AA AI +G I + VKC WGKE Sbjct: 1 MMMDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGN-DPYCFVEFYENRHAAAALAAMNGRKILGKDMKVNWAS---TPSSQ----KKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKE 278 HSP 2 Score: 88.5817 bits (218), Expect = 5.399e-19 Identity = 57/211 (27.01%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQ--------------IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYE 627 D +N+ ++VG+L EI+ + F FG+ +++D +G+ Y FI F A A+ MN L G Q++ NWA+ + P++ +N + SK + ++ G I +++Q+++ FS FG I++++V +P+ KG++F+ F + + A +AI S++ T + T+KC W T + + Q P P + Sbjct: 92 DTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWAT--RKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKE--TADMRSMQQMPMPQQ 293
BLAST of TIA-1-related RNA binding protein vs. Ensembl Zebrafish
Match: tial1 (TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]) HSP 1 Score: 205.297 bits (521), Expect = 1.084e-61 Identity = 112/285 (39.30%), Postives = 169/285 (59.30%), Query Frame = 1 Query: 34 LMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRP--YELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D ++ K +YVGNL ++T+ L+L +F G C C ++ + + +PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR + + + + ++ V ++ N VY GI LTE L+R F FG+I ++VFP+K Y+FI +S+HE+AA AI +G I +VVKC WGKE+ Sbjct: 1 MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN-DPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKES 277 HSP 2 Score: 48.521 bits (114), Expect = 8.967e-6 Identity = 24/87 (27.59%), Postives = 44/87 (50.57%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNI 312 N +Y G + +T+ L+ F FGQ + + + Y+FI F+ H++A+ A+ +N ++ GH +K W S + A N+ Sbjct: 203 NCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPE-----KGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNV 284
BLAST of TIA-1-related RNA binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 229.18 bits (583), Expect = 1.748e-70 Identity = 123/288 (42.71%), Postives = 171/288 (59.38%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 L D T +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ P+S K D + +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ T YE V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 1 MLFDDTKTILLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLT---YEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
BLAST of TIA-1-related RNA binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 225.713 bits (574), Expect = 3.116e-69 Identity = 120/280 (42.86%), Postives = 169/280 (60.36%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 + +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ P+S K D + +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ T YE V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLT---YEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275 HSP 2 Score: 88.5817 bits (218), Expect = 1.152e-18 Identity = 56/190 (29.47%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNIT---NVK-VDYSKAIQ--------IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 D N+ ++VG+L EIT + F FG+ +++D +G+ Y F+ F A A+A M L G Q++ NWA+ + PA T N K + Y + + ++ G + + EQ+++ FS FG I++V+V +PD KG++F+ F++ + A +AI S++ T + +KC W Sbjct: 90 DANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRV--FPD---KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG 273
BLAST of TIA-1-related RNA binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 224.557 bits (571), Expect = 1.080e-68 Identity = 120/284 (42.25%), Postives = 171/284 (60.21%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS--GSQNPASNITNV--KVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 + +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ SQ +N ++V + +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ T YE V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLT---YEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286 HSP 2 Score: 50.0618 bits (118), Expect = 5.191e-6 Identity = 29/101 (28.71%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 49 NNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQI 351 +N +Y G + +T+QL+ F FGQ + + D Y+F+ F+ H++A+ A+ +N ++ GH +K W G + P ++ N S+A QI Sbjct: 212 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPD-----KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYW--GKETP--DMLNPVQQVSEASQI 303
BLAST of TIA-1-related RNA binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 224.557 bits (571), Expect = 1.821e-68 Identity = 122/296 (41.22%), Postives = 174/296 (58.78%), Query Frame = 1 Query: 19 FIYLFLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS--GSQNPASNITNV--KVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 ++ L+ P YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ SQ +N ++V + +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ T YE V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 9 LVFFSLLSPR-----YVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLT---YEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 295 HSP 2 Score: 50.0618 bits (118), Expect = 4.761e-6 Identity = 29/101 (28.71%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 49 NNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQI 351 +N +Y G + +T+QL+ F FGQ + + D Y+F+ F+ H++A+ A+ +N ++ GH +K W G + P ++ N S+A QI Sbjct: 221 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPD-----KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYW--GKETP--DMLNPVQQVSEASQI 312
BLAST of TIA-1-related RNA binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 214.157 bits (544), Expect = 1.180e-64 Identity = 115/271 (42.44%), Postives = 162/271 (59.78%), Query Frame = 1 Query: 82 HEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 ++T+ L+L VF G C C ++ D +G +PY F+EF EH+ A+ ++A MN + G ++KVNWA+ P+S K D + +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ T YE V ++ +N VY G+T LTE+L+R F FG+I V+VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 29 RDVTEPLILQVFSQLGPCKSCKMIMDTAGN-DPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLT---YEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 288 HSP 2 Score: 87.8113 bits (216), Expect = 2.769e-18 Identity = 56/190 (29.47%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNIT---NVK-VDYSKAIQ--------IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 D N+ ++VG+L EIT + F FG+ +++D +G+ Y F+ F A A+A M L G Q++ NWA+ + PA T N K + Y + + ++ G + + EQ+++ FS FG I++V+V +PD KG++F+ F++ + A +AI S++ T + +KC W Sbjct: 103 DANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRV--FPD---KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG 286
BLAST of TIA-1-related RNA binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 218.779 bits (556), Expect = 1.055e-66 Identity = 120/288 (41.67%), Postives = 172/288 (59.72%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
BLAST of TIA-1-related RNA binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 216.083 bits (549), Expect = 1.310e-65 Identity = 120/292 (41.10%), Postives = 173/292 (59.25%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA---SGSQNPASNITNVKVDYSKA-IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA S + S+ T V S+ +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
BLAST of TIA-1-related RNA binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 216.083 bits (549), Expect = 1.405e-65 Identity = 120/289 (41.52%), Postives = 170/289 (58.82%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQIN-PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D N PY F+EF+EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 279
BLAST of TIA-1-related RNA binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 216.083 bits (549), Expect = 1.481e-65 Identity = 120/292 (41.10%), Postives = 173/292 (59.25%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA---SGSQNPASNITNVKVDYSKA-IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA S + S+ T V S+ +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
BLAST of TIA-1-related RNA binding protein vs. Ensembl Mouse
Match: Tial1 (Tia1 cytotoxic granule-associated RNA binding protein-like 1 [Source:MGI Symbol;Acc:MGI:107913]) HSP 1 Score: 209.534 bits (532), Expect = 3.252e-63 Identity = 116/289 (40.14%), Postives = 169/289 (58.48%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D + +YVGNL ++T+ L+L +F G C C ++ + + +PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ +E V ++ N VY GI LT++L+R F FG+I ++VFP+K Y+F+ +STHE+AA AI +G I +VVKC WGKE+ Sbjct: 1 MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN-DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLR---FEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278 HSP 2 Score: 88.1965 bits (217), Expect = 1.392e-18 Identity = 54/202 (26.73%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN------------VKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQ 606 D +N+ ++VG+L EIT + + + F FG+ +++D +G+ Y F+ F A A+ M L G Q++ NWA+ + PA T V K ++ G I + +Q+++ FS FG I++++V +P+ KG++F+ F+ + A +AI S++ T + +KC W + + F+Q Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT-RKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 287 HSP 3 Score: 53.1434 bits (126), Expect = 3.305e-7 Identity = 28/96 (29.17%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSK 339 N +Y G + +TDQL+ F FGQ + + + Y+F+ F+ H++A+ A+ +N ++ GH +K W G ++P +VDYS+ Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW--GKESPDMTKNFQQVDYSQ 292
BLAST of TIA-1-related RNA binding protein vs. UniProt/SwissProt
Match: sp|P52912|TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.036e-64 Identity = 120/292 (41.10%), Postives = 173/292 (59.25%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA---SGSQNPASNITNVKVDYSKA-IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA S + S+ T V S+ +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +S+HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
BLAST of TIA-1-related RNA binding protein vs. UniProt/SwissProt
Match: sp|P31483|TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens OX=9606 GN=TIA1 PE=1 SV=3) HSP 1 Score: 214.927 bits (546), Expect = 3.557e-64 Identity = 119/292 (40.75%), Postives = 174/292 (59.59%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA---SGSQNPASNITNVKVDYSKA-IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENF 882 M+ K +YVGNL ++T+ L+L +F G C C ++ D +G +PY F+EF+EH+ A+ A+A MN + G ++KVNWA S + S+ T V S+ +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ + Y+ V ++ +N VY G+T LTE+L+R F FG+I ++VFPDK Y+F+ +++HE+AA AI +G I +VVKC WGKE Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN-DPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---YDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
BLAST of TIA-1-related RNA binding protein vs. UniProt/SwissProt
Match: sp|Q01085|TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.904e-62 Identity = 116/289 (40.14%), Postives = 169/289 (58.48%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D + +YVGNL ++T+ L+L +F G C C ++ + + +PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ +E V ++ N VY GI LT++L+R F FG+I ++VFP+K Y+F+ +STHE+AA AI +G I +VVKC WGKE+ Sbjct: 1 MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN-DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLR---FEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 278 HSP 2 Score: 87.8113 bits (216), Expect = 1.313e-17 Identity = 54/202 (26.73%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN------------VKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQ 606 D +N+ ++VG+L EIT + + + F FG+ +++D +G+ Y F+ F A A+ M L G Q++ NWA+ + PA T V K ++ G I + +Q+++ FS FG I++++V +P+ KG++F+ F+ + A +AI S++ T + +KC W + + F+Q Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT-RKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 287 HSP 3 Score: 53.1434 bits (126), Expect = 2.688e-6 Identity = 28/96 (29.17%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSK 339 N +Y G + +TDQL+ F FGQ + + + Y+F+ F+ H++A+ A+ +N ++ GH +K W G ++P +VDYS+ Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW--GKESPDMTKNFQQVDYSQ 292
BLAST of TIA-1-related RNA binding protein vs. UniProt/SwissProt
Match: sp|P70318|TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.295e-59 Identity = 118/305 (38.69%), Postives = 171/305 (56.07%), Query Frame = 1 Query: 31 FLMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF--SGQIN--------------PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D + +YVGNL ++T+ L+L +F G C C ++ + S ++N PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E KQ +E V ++ N VY GI LT++L+R F FG+I ++VFP+K Y+F+ +STHE+AA AI +G I +VVKC WGKE+ Sbjct: 1 MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLR---FEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 295 HSP 2 Score: 88.1965 bits (217), Expect = 1.157e-17 Identity = 54/202 (26.73%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITN------------VKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQ 606 D +N+ ++VG+L EIT + + + F FG+ +++D +G+ Y F+ F A A+ M L G Q++ NWA+ + PA T V K ++ G I + +Q+++ FS FG I++++V +P+ KG++F+ F+ + A +AI S++ T + +KC W + + F+Q Sbjct: 109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT-RKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV--FPE---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 304 HSP 3 Score: 53.1434 bits (126), Expect = 2.355e-6 Identity = 28/96 (29.17%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSK 339 N +Y G + +TDQL+ F FGQ + + + Y+F+ F+ H++A+ A+ +N ++ GH +K W G ++P +VDYS+ Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW--GKESPDMTKNFQQVDYSQ 309
BLAST of TIA-1-related RNA binding protein vs. UniProt/SwissProt
Match: sp|Q9LQI9|UBP1B_ARATH (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.179e-42 Identity = 97/299 (32.44%), Postives = 151/299 (50.50%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVV-RYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPY------------ELVYKEAPLTN---TNVYVAGITENLTEELVRCHFEEFGR--IDSVKVFPDKAYAFINYSTHEAAARAISQ--RHGYKINNNVVKCNWGKE 876 DP+ + +YVGN+ ++T+ LL VF G C ++R + + Y F+ + + ++A LA+ +N L+G +KVNWA S + D S IFVGD+ +V + ML FS + + D +V+ G+S+GF F+SF N+QDA+ AI + WL +R I+CNWAT+ T E + + + EAP N T VYV + +++ + HF G I+ V+V DK + F+ YSTH AA AI H Y ++ +KC+WG + Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRK---EKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQ--------REDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSY-LSGRQMKCSWGSK 335
BLAST of TIA-1-related RNA binding protein vs. TrEMBL
Match: D5JG77 (TIA1-like protein OS=Dugesia japonica OX=6161 GN=TIAL-3 PE=2 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 1.088e-153 Identity = 210/308 (68.18%), Postives = 249/308 (80.84%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQ---NPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAVTTPTAQPNYPSA 951 M NN+ IYVGNLP + DQLL+ +FG+FGQC+ CHI+RDFS Q NPYAFIE+ +H +ASLA++ M+ I +W +Q+KVNW+SG PA+ + + K+DYS ++QIFVGDIGLDV+E MLK+ FSQFG +ID KVVRYPDGQS+GFAF+SF+NR +AE AI SMHKTW HNRTIKCNWATRNG D EQF +YTPRPYELVYKEAPLTNTNVYVAG ENLTEEL+ CHF+EFGRIDSVKV+P+K +AFIN+ THEAAARAISQRHGYKIN+NV+KCNWGKENFG T P QP SA Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSAMDGIYMWNNQIKVNWSSGPSAVPGPAA-VASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAG--ENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFGIS------TATIPALQPAMASA 299
BLAST of TIA-1-related RNA binding protein vs. TrEMBL
Match: D5JG78 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-4 PE=2 SV=1) HSP 1 Score: 425.246 bits (1092), Expect = 2.050e-145 Identity = 204/287 (71.08%), Postives = 238/287 (82.93%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASG-------SQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 MD NN+ IYVGNLP ITD LLL +FG+FGQCVGCHI+RDFS Q NPYAFIE+ H AASLA+A M+ I +W +Q+KVNW+SG S P+SN K+DYS IQIFVGDIGLDV+E MLK+ FS+FG ++D KVVRY DGQS+GFAF++F+ R DAE AI MHKTW HNRTIKCNWATRNG D +QF +YTPRPYELVYKEAPLTNTNVY+AGI E LTEEL+R HFEEFGRID+VKV+P+KA+AFIN+ THE+AARAISQRHGYKIN+NV+KCNWGKE Sbjct: 1 MDIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAASLALAAMDGIFMWNNQIKVNWSSGNSVNTVASSLPSSN----KIDYSNTIQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNWATRNGLDGDQFIKYTPRPYELVYKEAPLTNTNVYIAGIPEGLTEELIRVHFEEFGRIDAVKVYPEKAHAFINFVTHESAARAISQRHGYKINDNVIKCNWGKE 283 HSP 2 Score: 73.559 bits (179), Expect = 7.423e-11 Identity = 46/182 (25.27%), Postives = 85/182 (46.70%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVF-----PDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 I+VG++ + + +L F FG + ++R Q+ +AF+ +TN A A+ +M ++ N IK NW++ N + P ++ Y ++V I ++ E +++ F EFG + KV + +AF+ +S + A +AI + H +N +KCNW N Sbjct: 9 IYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAASLALAAMDGIFMWNNQIKVNWSSGNSVN--TVASSLPSSNKIDYSNT----IQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNWATRN 184
BLAST of TIA-1-related RNA binding protein vs. TrEMBL
Match: D5JG75 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-1 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.891e-75 Identity = 137/290 (47.24%), Postives = 189/290 (65.17%), Query Frame = 1 Query: 55 KCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNV-----KVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-GTDEEQFK-QYTPRPY----ELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFG 891 K IY+ NLP I+++ LL++FG FG CV C + + A+IEF+ +A A+A MNN + +Q+ V A N N+T+ KVDYS+++QIFVG IG D++E +LK+ F+ G ++D KVVR DGQ KGFAF+SF+N DA +AI M+ T HNR I+CNWAT+N ++ F ++ P + E + EAP +NT+VYV G E+LTEEL+R FE FG+I +VK FP+K +AF+NY TH+AAA AI Q +GYKINN +KCNWGK+N G Sbjct: 1 KTIYISNLPSPISEEDLLSIFGSFGACVSCELNLETLT-----AYIEFDNESSAEKALA-MNNTPMESNQMSVEIAY-VDNVVQNVTSYTLASKKVDYSQSVQIFVGGIGFDIDEAILKEGFAHCGQVLDTKVVRSNDGQHKGFAFVSFSNESDANSAIQKMNNTMFHNRKIQCNWATKNKNSNGAPFNPKFNPTKFNKTLEDISYEAPESNTSVYVLG--ESLTEELLRPIFERFGKIKNVKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINNIELKCNWGKKNAALG 281
BLAST of TIA-1-related RNA binding protein vs. TrEMBL
Match: T1G9I0 (Uncharacterized protein OS=Helobdella robusta OX=6412 GN=20217727 PE=4 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 6.652e-71 Identity = 123/281 (43.77%), Postives = 170/281 (60.50%), Query Frame = 1 Query: 49 NNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPD-GQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNG----TDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 + + +YVGNL +++ LL+T+FG GQC GC ++R+ ++ YAFIEFN H A +A+ MN ++ G +LKVNWA+ P I K D SK IFVGD+ D+ LK+AF+ FG I D K++ P G+SKGF F+ F ++DAE AIT M+ TWL RTI+ NWAT G + Q Y Y V ++ NT VY GIT T+ +++ F+ +G I V+VF +K YAF+ YST +AA RAI HG IN ++VKC+WGKE Sbjct: 7 STRTLYVGNLDPMVSEDLLMTLFGTLGQCKGCKLIREAGSEL--YAFIEFNTHTEAQMALMAMNKRNVLGKELKVNWAT---QPGGQI---KQDTSKHFHIFVGDLTPDIEAPQLKEAFAPFGEISDAKIITDPQTGRSKGFGFVCFVRKEDAEMAITGMNGTWLGGRTIRTNWATGKGVMSTSMRPQQSHYKELNYNEVQNQSGPNNTTVYCGGITSETTDSMMKEAFQSYGEIVEVRVFKEKGYAFVRYSTKDAAVRAICGVHGTDINGSIVKCSWGKE 279 HSP 2 Score: 87.0409 bits (214), Expect = 8.985e-15 Identity = 49/194 (25.26%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKA-------------IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQF 600 I+VG+L +I L F FG+ I+ D +G+ + F+ F + A +A+ GMN L G ++ NWA+G ++++ + Y + ++ G I + + M+K+AF +G I++V+V + KG+AF+ ++ + A AI +H T ++ +KC+W ++Q Sbjct: 99 IFVGDLTPDIEAPQLKEAFAPFGEISDAKIITDPQTGRSKGFGFVCFVRKEDAEMAITGMNGTWLGGRTIRTNWATGKGVMSTSMRPQQSHYKELNYNEVQNQSGPNNTTVYCGGITSETTDSMMKEAFQSYGEIVEVRVFK-----EKGYAFVRYSTKDAAVRAICGVHGTDINGSIVKCSWGKEQAELQQQI 287
BLAST of TIA-1-related RNA binding protein vs. TrEMBL
Match: R7T9R2 (Uncharacterized protein (Fragment) OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_110688 PE=4 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.180e-70 Identity = 123/296 (41.55%), Postives = 179/296 (60.47%), Query Frame = 1 Query: 64 YVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE--NFGFGPSTTGPAVTTPTAQPN 939 YVGNL +T+ LL+ +FG G C GC I+ + + PYAF+EF+EH +A+LA+ MN + +G ++KVNWA+ S T K D SK IFVGD+ D+ L++AF FG+I D K++R P +SKG+ F+S+ R++AENAI SM+ W+ +R I+ NWA R + P ++ V+K++ TN VY GI LTE+LVR F E G+I+ ++VF DK YAFI Y+T EAA AI + H ++ + VKC+WGKE + P+ G V + +QP+ Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETGNE--PYAFVEFSEHSSAALALGTMNKRTCFGREMKVNWAT------SPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIRYNTKEAATEAIVKMHQTEVGGHTVKCSWGKESKDSPADPNGQGQMVGSQVSQPS 288 HSP 2 Score: 81.6481 bits (200), Expect = 3.527e-13 Identity = 51/188 (27.13%), Postives = 86/188 (45.74%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSG-QINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWA-SGSQNPASNITNV---------KVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 D + + I+VG+L +I L F FG C I+RD + Y F+ + E + A A+ MN + ++ NWA PA+ TN K ++ G I + E +++ AF + G I +++V + KG+AF+ + ++ A AI MH+T + T+KC+W Sbjct: 81 DTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFK-----DKGYAFIRYNTKEAATEAIVKMHQTEVGGHTVKCSWG 263
BLAST of TIA-1-related RNA binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 218.779 bits (556), Expect = 3.480e-67 Identity = 116/285 (40.70%), Postives = 167/285 (58.60%), Query Frame = 1 Query: 34 LMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNG-TDEEQFKQYTPR--PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 +MD K +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH A+ A+ MN + G +KVNWAS P+S K D S +FVGD+ +++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M+ WL R I+ NWATR + ++ + YE V ++ +N VY G+T LT++L+R F FG+I ++VFPDK Y+F+ + +HE AA AI +G I + VKC WGKE Sbjct: 1 MMDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGN-DPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWAS---MPSSQ----KKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYETGNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKE 277
BLAST of TIA-1-related RNA binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 218.779 bits (556), Expect = 3.480e-67 Identity = 116/285 (40.70%), Postives = 167/285 (58.60%), Query Frame = 1 Query: 34 LMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNG-TDEEQFKQYTPR--PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 +MD K +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH A+ A+ MN + G +KVNWAS P+S K D S +FVGD+ +++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M+ WL R I+ NWATR + ++ + YE V ++ +N VY G+T LT++L+R F FG+I ++VFPDK Y+F+ + +HE AA AI +G I + VKC WGKE Sbjct: 1 MMDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGN-DPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWAS---MPSSQ----KKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYETGNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKE 277
BLAST of TIA-1-related RNA binding protein vs. Ensembl Cavefish
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:103030475]) HSP 1 Score: 202.601 bits (514), Expect = 1.557e-60 Identity = 113/292 (38.70%), Postives = 168/292 (57.53%), Query Frame = 1 Query: 34 LMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNG------TDEEQFKQYTPRP---YELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D + K +YVGNL ++T+ L+L +F G C C ++ + + +PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ ++ ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR D +Q +E V ++ N VY GI L+E L+R F FG+I ++VFP+K Y+FI +S+HE+AA AI +G I +++VKC WGKE+ Sbjct: 1 MEDDCHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN-DPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDSKQIAHLGSSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLIRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIESHIVKCYWGKES 284
BLAST of TIA-1-related RNA binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 189.119 bits (479), Expect = 2.852e-56 Identity = 101/251 (40.24%), Postives = 146/251 (58.17%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPR--PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFI 780 MD K +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF EH A+ A+ MN + G +KVNWAS P+S K D S +FVGD+ +++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M+ WL R I+ NWATR + + + YE V ++ +N VY G+T LT++L+R F FG+I ++VFPDK Y+F+ Sbjct: 1 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGN-DPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWAS---MPSSQ----KKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYESNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFV 243 HSP 2 Score: 60.077 bits (144), Expect = 1.154e-9 Identity = 40/188 (21.28%), Postives = 80/188 (42.55%), Query Frame = 1 Query: 325 VDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD------KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWG 870 +D + ++VG++ DV E ++ F+Q G K++ G + F+ F A A+ +M+ + + +K NWA+ + ++ + +V+V ++ ++ + V+ F FG+I +V D K Y FI++ A AI Q +G + ++ NW Sbjct: 1 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDP-YCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWASMPSSQKKDTSNHF----------------HVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWA 171
BLAST of TIA-1-related RNA binding protein vs. Ensembl Cavefish
Match: ENSAMXT00000018970.2 (polyadenylate-binding protein 1-like [Source:NCBI gene;Acc:103030422]) HSP 1 Score: 119.783 bits (299), Expect = 7.497e-29 Identity = 73/275 (26.55%), Postives = 139/275 (50.55%), Query Frame = 1 Query: 40 DPTNNKC----IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTN---TNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD----KAYAFINYSTHEAAARAISQRHG 831 DP+ K I++ NL I ++ L F FG + C ++ D +G Y F+ F H+AA A+ MN + L ++ V + + + +++ +++ + G D++++ LKD F ++G + ++V+ G+SKGF F+SF +DA+ A+ M+ L+ + + A + G + + K R +E + K+ +T N+YV + + L +E +R F FG I S KV + K + F+ +S+ E A +A+++ +G Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKG-YGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFT---NVYIKNFGEDMDDEKLKDVFGKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKELNGKQVYVGRAQKKGERQTELK----RKFEQM-KQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNG 355 HSP 2 Score: 103.605 bits (257), Expect = 2.322e-23 Identity = 71/272 (26.10%), Postives = 134/272 (49.26%), Query Frame = 1 Query: 58 CIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQIN-PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHGYKINNNVV 855 +YVG+L ++T+ +L F G + + RD + + YA++ F + A A+ MN + G +++ W+ ++P+ + V IF+ ++ ++ + L D FS FG+I+ KVV +G SKG+ F+ F + AE AI M+ L++R + + R + +E+ + R E TNVY+ E++ +E ++ F ++G S++V D K + F+++ HE A RA+ + +G ++N V Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQ--RDPSLRKSGVG-------NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKV---FVGRFKSRKEREAEMGARAKEF---------TNVYIKNFGEDMDDEKLKDVFGKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKELNGKQV 261
BLAST of TIA-1-related RNA binding protein vs. Ensembl Sea Lamprey
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 152.14 bits (383), Expect = 1.416e-43 Identity = 79/179 (44.13%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPR--PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 +FVGD+ +++ L+ AF+ FG I D +VV+ G+SKG+ F+SF + DAENAI M WL R I+ NWATR + + P+ +E V ++ TN VY GIT+ LTE+L+R F FG+I ++VFPDK Y+FI ++THE+AA AI +G I VKC WGKE Sbjct: 5 VFVGDLSPEISTDDLRAAFAPFGKISDARVVKDLATGKSKGYGFVSFFQKLDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKGSQDTDPKHLSFEEVLNQSSPTNCTVYCGGITQGLTEQLMRQTFLLFGQILEIRVFPDKGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKE 183 HSP 2 Score: 82.4185 bits (202), Expect = 3.785e-18 Identity = 55/218 (25.23%), Postives = 105/218 (48.17%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWAS-------GSQNPASNITNVKVDYSKA----IQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAG 678 ++VG+L EI+ L F FG+ +++D +G+ Y F+ F + A A+ M L G Q++ NWA+ GSQ+ + + +++ ++ G I + EQ+++ F FG I++++V +PD KG++F+ F + A +AI S++ + + ++KC W QF+Q + ++ Y + P T + G Sbjct: 5 VFVGDLSPEISTDDLRAAFAPFGKISDARVVKDLATGKSKGYGFVSFFQKLDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKGSQDTDPKHLSFEEVLNQSSPTNCTVYCGGITQGLTEQLMRQTFLLFGQILEIRV--FPD---KGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKEASDPVNQFQQ---QFSQVGYTQQPWTQWGPWYGG 214 HSP 3 Score: 45.8246 bits (107), Expect = 8.069e-6 Identity = 25/90 (27.78%), Postives = 44/90 (48.89%), Query Frame = 1 Query: 43 PTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNI 312 PTN +Y G + +T+QL+ F FGQ + + D Y+FI F H++A+ A+ +N ++ G +K W + +P + Sbjct: 108 PTNC-TVYCGGITQGLTEQLMRQTFLLFGQILEIRVFPD-----KGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKEASDPVNQF 191
BLAST of TIA-1-related RNA binding protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]) HSP 1 Score: 116.701 bits (291), Expect = 1.624e-28 Identity = 69/274 (25.18%), Postives = 135/274 (49.27%), Query Frame = 1 Query: 40 DPTNNKC----IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKE--APLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD----KAYAFINYSTHEAAARAISQRHG 831 DP+ K +++ NL I ++ + F FG + C ++ D +G Y F+ F +AA A+ MN + L + + ++ + + +++ + G D++E L++ F +FG + V V+ G+S+GF F+SF +DA+ A+ M+ L+ RT+ A + G + + K R +E++ +E + N+YV + +N+ +E +R F +G I S KV + K + F+ +S+ E A +A+++ +G Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVVCDENGSRG-YGFVHFETQEAADRAIEKMNGMLLNDRLARRRFVGRFKSRKEREQEMGARAKEFTNVYIKNFGDDMDEDKLREFFGKFGKALSVCVMSDECGKSRGFGFVSFEQHEDAQRAVNEMNGKELNGRTVFVGRAQKKGERQAELK----RKFEMLKQERISRYQGVNLYVKNLDDNIDDEQLRKEFAPYGTITSTKVMSEEGRSKGFGFVCFSSPEEATKAVTEMNG 358 HSP 2 Score: 105.916 bits (263), Expect = 6.546e-25 Identity = 68/271 (25.09%), Postives = 137/271 (50.55%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQIN-PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHGYKINNNVV 855 +YVG+L ++T+ +L F G + + RD + + YA++ F + A A+ MN + G +++ W+ ++P+ + V +F+ ++ ++ + + D FS FG+I+ KVV +G S+G+ F+ F ++ A+ AI M+ L++R + + R + +E+ ++ R E TNVY+ +++ E+ +R F +FG+ SV V D + + F+++ HE A RA+++ +G ++N V Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQ--RDPSLRKSGVG-------NVFIKNLDKSIDNKAMYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETQEAADRAIEKMNGMLLNDRLARRRFVGRFKSRKEREQEMGARAKEF---------TNVYIKNFGDDMDEDKLREFFGKFGKALSVCVMSDECGKSRGFGFVSFEQHEDAQRAVNEMNGKELNGRTV 264 HSP 3 Score: 73.9442 bits (180), Expect = 1.859e-14 Identity = 46/178 (25.84%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD----KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNW 867 ++VGD+ DV E ML + FS G ++ ++V R +S G+A+++F DAE A+ +M+ + + I+ W+ R+ + + NV++ + +++ + + F FG I S KV D + Y F+++ T EAA RAI + +G +N+ + + + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKS------------------GVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVVCDENGSRGYGFVHFETQEAADRAIEKMNGMLLNDRLARRRF 172
BLAST of TIA-1-related RNA binding protein vs. Ensembl Sea Lamprey
Match: sf3b4 (splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]) HSP 1 Score: 97.8265 bits (242), Expect = 1.932e-22 Identity = 63/207 (30.43%), Postives = 112/207 (54.11%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDV-KVVRYPD-GQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTN 663 + +YVG L ++++ LL +F G V H+ +D + Q Y F+EF + A A+ MN I L+G ++VN AS ++ N+ V IF+G++ +++E++L D FS FG I+ K +R P+ G SKG+AF++F + + ++ AI +M+ +L NR I ++A + + E+ R L+ + PL+ + Sbjct: 12 DATVYVGGLDDKVSEALLWELFLQAGPVVNTHMPKDRITQQHQGYGFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKAS------AHNKNLDV----GANIFIGNLDTEIDEKLLYDTFSAFGVILQTPKTMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPISVSYAFKKDSKGERHGSAAER---LLAAQNPLSQAD 205 HSP 2 Score: 58.9214 bits (141), Expect = 8.982e-10 Identity = 42/181 (23.20%), Postives = 83/181 (45.86%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRI-DSVKVFPD------KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNW 867 ++VG + V+E +L + F Q G +++ + + Q +G+ F+ F +DA+ AI M+ L+ + I+ N A+ + + + N+++ + + E+L+ F FG I + K D K YAFIN+++ EA+ AI +G + N + ++ Sbjct: 15 VYVGGLDDKVSEALLWELFLQAGPVVNTHMPKDRITQQHQGYGFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLD-------------------VGANIFIGNLDTEIDEKLLYDTFSAFGVILQTPKTMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPISVSY 176
BLAST of TIA-1-related RNA binding protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]) HSP 1 Score: 91.2781 bits (225), Expect = 3.766e-20 Identity = 57/228 (25.00%), Postives = 114/228 (50.00%), Query Frame = 1 Query: 187 FIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQF-GSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKE--APLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD----KAYAFINYSTHEAAARAISQRHGYKINNN 849 F+ F +AA A+ MN + L ++ V + + +++ +++ + G D++++ L++ F Q+ G + VKV+ G+SKGF F+SF +DA+ A+ M+ L+ R I A + + + K R +E++ +E + N+YV + +N+ +E + F FG I S KV + + + F+ +S+ E A +A+++ +G I + Sbjct: 2 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEFGAKAREFTN---VYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQKKAERQTELK----RKFEMLKQERMSKYQGVNLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVTEMNGRIIGSK 222
BLAST of TIA-1-related RNA binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002852.1 (pep scaffold:Pmarinus_7.0:GL477021:232626:260651:-1 gene:ENSPMAG00000002591.1 transcript:ENSPMAT00000002852.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 72.7886 bits (177), Expect = 8.290e-15 Identity = 49/162 (30.25%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSG---QINPYAFIEFNEHQAASLAVAGMNNI-SLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKT 534 ++VG +P +++ L +F FG +I+RD + Q F+ F +AA A ++NI +L G P++ ++ ++ K +F+G I +E ++ FS FG + + +V+R PDGQSKG AF+++T R A+NAI MH++ Sbjct: 54 MFVGQIPRSWSEKELRDLFEQFGPVYEINIVRDRTQKPPQSRGCCFVTFYTRKAALEAQNALHNIKTLPGLHAPTELV-----PSTTSSSSSLEERK---LFIGMISKKCSENDIRAMFSPFGQMEECRVLRGPDGQSKGCAFITYTARAMAQNAIKGMHQS 207 HSP 2 Score: 63.929 bits (154), Expect = 8.462e-12 Identity = 50/175 (28.57%), Postives = 78/175 (44.57%), Query Frame = 1 Query: 340 AIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR---YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELV----YKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVF--PD---KAYAFINYSTHEAAARAISQRH 828 AI++FVG I +E+ L+D F QFG + ++ +VR QS+G F++F R+ A A ++H N T G P ELV + L +++ I++ +E +R F FG+++ +V PD K AFI Y+ A AI H Sbjct: 51 AIKMFVGQIPRSWSEKELRDLFEQFGPVYEINIVRDRTQKPPQSRGCCFVTFYTRKAALEAQNALH-----------NIKTLPGLHA---------PTELVPSTTSSSSSLEERKLFIGMISKKCSENDIRAMFSPFGQMEECRVLRGPDGQSKGCAFITYTARAMAQNAIKGMH 205
BLAST of TIA-1-related RNA binding protein vs. Ensembl Yeast
Match: PUB1 (Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; human homolog Tia1 is critical for normal synaptic plasticity; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004961]) HSP 1 Score: 104.76 bits (260), Expect = 6.384e-25 Identity = 58/178 (32.58%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 46 TNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVV-RYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATR 576 T+++ +YVGNL IT+ +L F G IM D + + YAF+E+++ A++A+ +N + + +K+NWA SQ +S+ T +FVGD+ ++V+++ L++AF F S + V+ G S+G+ F+SFT++ DA+NA+ SM L+ R ++ NWA + Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDT---------FNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240 HSP 2 Score: 63.5438 bits (153), Expect = 2.010e-11 Identity = 42/201 (20.90%), Postives = 92/201 (45.77%), Query Frame = 1 Query: 298 PASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA--TRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD------KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 PA+ IT + + + +VG++ + E +LK F G I ++K++ + ++ +AF+ + DA A+ +++ + N +K NWA ++ + ++ F N++V + N+ +E +R F++F S V D + Y F+++++ + A A+ G +N ++ NW + Sbjct: 62 PANAITGGRETSDRVL--YVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTF--------------------NLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240 HSP 3 Score: 55.0694 bits (131), Expect = 1.120e-8 Identity = 31/97 (31.96%), Postives = 43/97 (44.33%), Query Frame = 1 Query: 604 QYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGP 894 Q P+ + + + AP T Y+ I TE + F+ FG I K +P+K FI Y THE AA I + ++ WGKE F P Sbjct: 323 QVNPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVALANFPFQGRNLRTGWGKERSNFMP 419
BLAST of TIA-1-related RNA binding protein vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]) HSP 1 Score: 98.2117 bits (243), Expect = 1.507e-22 Identity = 69/272 (25.37%), Postives = 124/272 (45.59%), Query Frame = 1 Query: 58 CIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQIN-PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTI----KCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHGYKIN 843 +YVG+L +++ L +F G + RD + + YA++ FN+H+A A+ +N + G ++ W+ ++P+ + + IF+ ++ D++ + L D FS FG I+ K+ +G+SKGF F+ F A+ AI +++ L+ + I + R+ EE Y TN+YV I T+E + F +FG I S + D K + F+NY HE A +A+ + ++N Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQ--RDPS-------LRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHY----------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELN 285 HSP 2 Score: 90.5077 bits (223), Expect = 5.447e-20 Identity = 52/204 (25.49%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYS----------KAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKE 642 +YV N+ E TD+ +F FG V + +D G++ + F+ + +H+ A AV +N+ L G +L V A Q + +K Y + + +FV ++ V+++ L++ F+ +G+I KV+R +G+SKGF F+ F+ ++A AIT ++ + + + A R Q Q ++ Y++ Sbjct: 221 LYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA---QKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQ 421 HSP 3 Score: 54.299 bits (129), Expect = 2.333e-8 Identity = 40/177 (22.60%), Postives = 80/177 (45.20%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSK---GFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHGYKINNNVV 855 ++VGD+ V+E L D FS GS+ ++V R D +K G+A+++F + + AI ++ T + R + W+ R+ + ++ + N+++ + ++ + + F FG I S K+ D K + F+++ AA AI +G +N + Sbjct: 40 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCR--DAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------------------GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 196
BLAST of TIA-1-related RNA binding protein vs. Ensembl Yeast
Match: NAM8 (RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function [Source:SGD;Acc:S000001128]) HSP 1 Score: 85.1149 bits (209), Expect = 3.213e-18 Identity = 75/279 (26.88%), Postives = 123/279 (44.09%), Query Frame = 1 Query: 181 YAFIEF--NEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAF-SQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKC--------------------------NWATR----------NGTDEEQFKQYTPRPYELVYKEAPL-------TNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 Y F++F + H A +L GM + +LK+NWA+ S SN + V IFVGD+ +V E L + F +++ S K+V G SKG+ F+ FTN + + A++ M +L+ R IK N +R NG + FK+ + ++ P NT V++ G++ +TE+ +R +F+ FG I VK+ K F+ Y +A AI+ G+ I N+ V+ +WG+ Sbjct: 108 YCFVDFPSSTHAANALLKNGMLIPNFPNKKLKLNWAT-SSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
BLAST of TIA-1-related RNA binding protein vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 72.7886 bits (177), Expect = 1.905e-14 Identity = 39/178 (21.91%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 58 CIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDF-SGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVK----VDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDG-QSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWAT 573 I+VG L I D+ L F H G +G ++ + + + Y +++F A A+ M + G +N + PA N K + +F+G++ + + + + F++ G ++ V++ +P+ Q KGF ++ F+N +DA+ A+ ++ ++ NR ++ ++++ Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRP--INCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 344
BLAST of TIA-1-related RNA binding protein vs. Ensembl Yeast
Match: HSH49 (U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM) [Source:SGD;Acc:S000005846]) HSP 1 Score: 57.3806 bits (137), Expect = 5.001e-10 Identity = 51/200 (25.50%), Postives = 90/200 (45.00%), Query Frame = 1 Query: 58 CIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQI-NPYAFIEFNEHQAASLAVAGMNN-ISLWGHQLKVNWASGSQNPASNITNVKVDYSKAI-QIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATR-NGTDEEQFKQYTPRPYELVYKEA 645 +YVGN+ IT + L +F + +D Q YAFIEF A A+ MNN + L+ +KV + S + +N+ D I ++F+ ++ ++ L F++FG +I + Y A++ F + + A+ AI S++ + N I ++A + NG ++ R L+ KEA Sbjct: 10 TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFNKFGKLIREPEIFYLSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKENGKGNAKYGDDVDR---LLNKEA 206 HSP 2 Score: 45.0542 bits (105), Expect = 6.353e-6 Identity = 49/204 (24.02%), Postives = 96/204 (47.06%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQS----KGFAFLSFTNRQDAENAITSMHKT-WLHNRTIKCNWATRN-GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENL-TEELVRCHFEEFGRIDSVKVFPDKAY--------AFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAV 915 ++VG+I + ++ L + F Q ++ +K YP + +G+AF+ F N+ DA+ AI M+ T L++R IK T + GT T P + K+ L +++ + +++ +++LV+ F +FG++ P+ Y A++ + E A AI + + NN + ++ + G G + G V Sbjct: 11 VYVGNIDPRITKEQLYELFIQINPVLRIK---YPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQVTNSTGT--------TNLPSN-ISKDMILPIAKLFIKNLADSIDSDQLVKI-FNKFGKLIRE---PEIFYLSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKENGKGNAKYGDDV 198
BLAST of TIA-1-related RNA binding protein vs. Ensembl Nematostella
Match: EDO32492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUY1]) HSP 1 Score: 137.502 bits (345), Expect = 6.644e-38 Identity = 80/241 (33.20%), Postives = 125/241 (51.87%), Query Frame = 1 Query: 64 YVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYP-DGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATR-NGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFI 780 YVGNL + T +L+ ++F + V C ++ S + PY F+EF H A A M+ ++ +LKVNWA+ TN IFVGD+ +V+ +L+ F FG I +V+VV+ P +SKGF F+SF R+DA AI M + + +K NWA R N + ++ ++ V+ ++ NT VYV + ++ + ++ F ++G I KVF DK YAFI Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINSVSYK-GPYCFVEFETHADAQEAKFRMDQRTVMDKKLKVNWATNHPGMKRGDTN------NHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFI 234 HSP 2 Score: 73.559 bits (179), Expect = 5.729e-15 Identity = 46/159 (28.93%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASN----ITNVKVD--YSKAIQ----IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLS 483 D N+ I+VG+L + + LL F FG+ +++D + + F+ F + A+ A+A M+++++ G Q+K NWA+ NP + + N+ D + ++ Q ++VG++ DV + L+ FSQ+GSI++ KV KG+AF+ Sbjct: 82 DTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVF-----ADKGYAFIK 235
BLAST of TIA-1-related RNA binding protein vs. Ensembl Nematostella
Match: EDO33206 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSV8]) HSP 1 Score: 111.694 bits (278), Expect = 1.493e-26 Identity = 74/278 (26.62%), Postives = 134/278 (48.20%), Query Frame = 1 Query: 40 DPTNNKC----IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKV-NWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTN----TNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHG 831 DP+ K I++ NL I ++ L F FG + C I +D G Y F+ F AA A+A ++ + L ++ V W S + I + K ++V + G D++++ +K+ ++ G I+ +KV+ P+G+SKGF F+SF ++AE A+ ++ + R + WA R E+ + E+ K N N+Y+ + + + +E +R F +G I S KV D K + F+ +S+ E A +A+++ +G Sbjct: 92 DPSLRKSGVGNIFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKER----IEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRL---WAGRAKKRAERAAEVK---AEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNG 359 HSP 2 Score: 87.8113 bits (216), Expect = 1.368e-18 Identity = 64/267 (23.97%), Postives = 126/267 (47.19%), Query Frame = 1 Query: 58 CIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQIN-PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHGYKI 840 +YVG+L ++T+ +L F G + + RD + + YA++ F + A A+ MN + G ++ W ++P+ + V IF+ ++ ++ + L D FS FG+I+ K+ + G KG+ F+ F A AI + L+++ + + R + +E+ ++ +P + TNVYV +++ +E ++ E G+I S+KV D K + F+++ T E A A++ +G +I Sbjct: 14 SLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTMNFDPIKGRPCRIMWQ--QRDPSLRKSGVG-------NIFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKV---FVGRWMSKKERIEKMGTQPKKF---------TNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEI 259 HSP 3 Score: 67.3958 bits (163), Expect = 4.954e-12 Identity = 47/193 (24.35%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 295 NPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD-----KAYAFINYSTHEAAARAISQRHGYKINNNVV 855 NP++ N + ++VGD+ DV E ML + FS GS++ ++V R +S G+A+++F AE A+ +M+ + R + W R+ + + N+++ + +++ + + F FG I S K+ D K Y F+++ T +AA AI++ G +N+ V Sbjct: 2 NPSTGAANYPI-----ASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTMNFDPIKGRPCRIMWQQRDPSLRKS------------------GVGNIFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKV 171
BLAST of TIA-1-related RNA binding protein vs. Ensembl Nematostella
Match: EDO42417 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1S3]) HSP 1 Score: 94.3597 bits (233), Expect = 2.634e-21 Identity = 63/207 (30.43%), Postives = 109/207 (52.66%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINP-YAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDV-KVVRYPD-GQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTN 663 + IYVG L ++++ L+ +F G V H+ +D Q++ Y F+EF + A A+ MN I ++G ++VN AS N +D +F+G++ +V+E++L D FS FG I+ K++R D G SKGFAF++F + ++ AI +M+ +L NR I ++A + + E+ R L+ + PL + Sbjct: 12 DATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASAH--------NKNLDVGA--NLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKESKGERHGSAAER---LLAAQNPLAQAD 205 HSP 2 Score: 54.6842 bits (130), Expect = 3.171e-8 Identity = 43/189 (22.75%), Postives = 89/189 (47.09%), Query Frame = 1 Query: 349 IFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQ-SKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRI-DSVKVFPD------KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWG--KENFG 885 I+VG + V+E ++ + F Q G +++V + + Q +G+ F+ F +DA+ AI M+ ++ + I+ N A+ + + + N+++ + + E+L+ F FG I + K+ D K +AFIN+++ +A+ AI +G + N + ++ KE+ G Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASAHNKNLD-------------------VGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKESKG 184
BLAST of TIA-1-related RNA binding protein vs. Ensembl Nematostella
Match: EDO46547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPQ1]) HSP 1 Score: 77.7962 bits (190), Expect = 1.270e-15 Identity = 69/279 (24.73%), Postives = 119/279 (42.65%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSK----GFAFLSFTNRQDAENA----ITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGK 873 ++VG +P ++ + L+ VF G +M DF+GQ YAF+ + A V +NN ++++ G S++ N + +FVG I V + + S+ + V V+ YP Q K GFAF+ + + +DA A +T + W H I +WA P + V +E +Y + + TEE + F +FG ++ VK D Y FI++ T E A A+ + +++ N ++ K Sbjct: 59 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTLNN-----YEIRKGKCIGV---CSSVDNCR--------LFVGGIPKKVKKDEIMAEVSKVTDNV-VDVIVYPSAQDKTKNRGFAFVEYISHRDAAMARRKLMTGKIQLWGHQ--IAVDWA---------------EPEQEVDQEIMDQVKVLYARNLLLSTTEETIEQAFSKFGEVERVKKIKD--YCFIHFRTKEQARDAMEAMNETELDGNEIEVTLAK 301 HSP 2 Score: 50.8322 bits (120), Expect = 5.433e-7 Identity = 36/167 (21.56%), Postives = 77/167 (46.11%), Query Frame = 1 Query: 337 KAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEF-GRIDSVKVFP-------DKAYAFINYSTHEAAARA 813 + ++FVG I D+ E L F G I +V+++ +GQ++G+AF+ +T++ DA+ + +++ N+ R G + + + + N ++V GI + + ++ + + + V V+P ++ +AF+ Y +H AA A Sbjct: 55 RGCEVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTLN-----------NYEIRKG--------------KCIGVCSSVDNCRLFVGGIPKKVKKDEIMAEVSKVTDNVVDVIVYPSAQDKTKNRGFAFVEYISHRDAAMA 196
BLAST of TIA-1-related RNA binding protein vs. Ensembl Nematostella
Match: EDO46306 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQK4]) HSP 1 Score: 75.8702 bits (185), Expect = 6.773e-15 Identity = 47/172 (27.33%), Postives = 87/172 (50.58%), Query Frame = 1 Query: 61 IYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRD-FSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYP-DGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWA 570 +YVG++ E+ ++ + T F FG + D + + +AF+E++ +AA LA+ MN + L G +KV S A I + + K +I++ + D+ E +K F FG ++ + + P G+ KG+ F+ + N+Q A +AI SM+ L + ++ A Sbjct: 66 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGRA 237 HSP 2 Score: 58.151 bits (139), Expect = 3.026e-9 Identity = 47/205 (22.93%), Postives = 90/205 (43.90%), Query Frame = 1 Query: 346 QIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYP-DGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWAT---RNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD------KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAVTTPTA 930 +++VG I ++ E+ ++ AF FG I + + P + + KGFAF+ + + A+ A+ M+ L R IK + + EQF+Q + +Y+A + +L E+ ++ FE FG++ + + K Y FI Y ++A AI+ + + + ++ G A+T PT+ Sbjct: 65 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKK------------YARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRV--------------GRAITPPTS 243
BLAST of TIA-1-related RNA binding protein vs. Ensembl Medaka
Match: ENSORLT00000003147.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101155125]) HSP 1 Score: 222.246 bits (565), Expect = 4.750e-68 Identity = 118/302 (39.07%), Postives = 173/302 (57.28%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPR--PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAVTTPTAQ 933 MD K +YVGNL ++T+ L+L +FG G C C ++ D +G +PY F+EF EH+ A+ +A MN + G ++KVNWA+ T+ K D S +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR + + + + ++ V ++ +N VY G+T LTE+++R F FG+I ++VFP+K Y+F+ +++HEAAA AI +G I VVKC WGKE GP P AQ Sbjct: 1 MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGH-DPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWAT-------TPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDM---VQGPIQQVPMAQ 291
BLAST of TIA-1-related RNA binding protein vs. Ensembl Medaka
Match: ENSORLT00000019582.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101158614]) HSP 1 Score: 218.779 bits (556), Expect = 1.032e-66 Identity = 115/286 (40.21%), Postives = 171/286 (59.79%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRN-----GTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKE 876 M+ + +YVGNL ++T+ L+L VF G C C ++ D +G +PY F+EF +H+ A+ ++A MN + G ++KVNWA+ T+ K D S +FVGD+ ++ + +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR T E K + +E V ++ +N VY G++ LTE+L+R F FG+I V+VFPDK Y+F+ +++HE+AA AI +G I+ +VVKC WGKE Sbjct: 1 MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN-DPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWAT-------TPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLS---FEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKE 275 HSP 2 Score: 50.8322 bits (120), Expect = 1.491e-6 Identity = 26/84 (30.95%), Postives = 44/84 (52.38%), Query Frame = 1 Query: 49 NNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNP 300 +N +Y G + +T+QL+ F FGQ + + D Y+F+ FN H++A+ A+ +N S+ GH +K W G + P Sbjct: 201 SNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPD-----KGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYW--GKETP 277
BLAST of TIA-1-related RNA binding protein vs. Ensembl Medaka
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:101155294]) HSP 1 Score: 204.142 bits (518), Expect = 3.566e-61 Identity = 110/285 (38.60%), Postives = 169/285 (59.30%), Query Frame = 1 Query: 34 LMDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRP--YELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 + D ++ + +YVGNL ++T+ L+L +F G C C ++ + + +PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ D++ + ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR + + + +E V ++ N VY GI L+E L+R F FG+I ++VFP+K Y+FI +S+H++AA AI +G I + VKC WGKE+ Sbjct: 1 MDDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN-DPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKES 277 HSP 2 Score: 50.0618 bits (118), Expect = 2.537e-6 Identity = 25/86 (29.07%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASN 309 N +Y G + E+++ L+ F FGQ + + + Y+FI F+ H +A+ A+ +N S+ GH +K W S + A N Sbjct: 203 NCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPE-----KGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKN 283
BLAST of TIA-1-related RNA binding protein vs. Ensembl Medaka
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:101155294]) HSP 1 Score: 198.749 bits (504), Expect = 7.380e-59 Identity = 111/297 (37.37%), Postives = 168/297 (56.57%), Query Frame = 1 Query: 40 DPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQIN--------------PYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRP--YELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKEN 879 D ++ + +YVGNL ++T+ L+L +F G C C ++ + +N PY F+EF EH+ A+ A+A MN + G ++KVNWA+ P+S K D S +FVGD+ D++ + ++ AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR + + + +E V ++ N VY GI L+E L+R F FG+I ++VFP+K Y+FI +S+H++AA AI +G I + VKC WGKE+ Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEVPIFVNRWGSSFFLQHTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWAT---TPSSQ----KKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKES 292 HSP 2 Score: 50.0618 bits (118), Expect = 2.663e-6 Identity = 25/86 (29.07%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 52 NKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASN 309 N +Y G + E+++ L+ F FGQ + + + Y+FI F+ H +A+ A+ +N S+ GH +K W S + A N Sbjct: 218 NCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPE-----KGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKN 298
BLAST of TIA-1-related RNA binding protein vs. Ensembl Medaka
Match: ENSORLT00000003149.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101155125]) HSP 1 Score: 189.119 bits (479), Expect = 1.266e-56 Identity = 96/252 (38.10%), Postives = 148/252 (58.73%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVR-YPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPR--PYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFIN 783 MD K +YVGNL ++T+ L+L +FG G C C ++ D +G +PY F+EF EH+ A+ +A MN + G ++KVNWA+ T+ K D S +FVGD+ ++ +K AF+ FG I D +VV+ G+SKG+ F+SF N+ DAENAI M WL R I+ NWATR + + + + ++ V ++ +N VY G+T LTE+++R F FG+I ++VFP+K Y+F++ Sbjct: 1 MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGH-DPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWAT-------TPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVS 244 HSP 2 Score: 62.3882 bits (150), Expect = 1.790e-10 Identity = 43/187 (22.99%), Postives = 81/187 (43.32%), Query Frame = 1 Query: 325 VDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPD------KAYAFINYSTHEAAARAISQRHGYKINNNVVKCNW 867 +D + ++VG++ DV E ++ + F Q G K++ G + F+ F + A I +M+ + + +K NWAT TP K+ ++ +V+V ++ +T + ++ F FG+I +V D K Y F+++ A AI Q G + ++ NW Sbjct: 1 MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDP-YCFVEFYEHRHATATIAAMNGRKILGKEVKVNWAT------------TPTSQ----KKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 170
BLAST of TIA-1-related RNA binding protein vs. Planmine SMEST
Match: SMESG000055085.1 (SMESG000055085.1) HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAVTTPTAQPNYPSAVSMXXXXXXXXXXXXXXXXXXXXPQMVE 1035 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAVTTPTAQPNYPSAVSMNQNDQYQYYQQYYQQYYNNNPQMVE Sbjct: 1 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQNPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGPAVTTPTAQPNYPSAVSMNQNDQYQYYQQYYQQYYNNNPQMVE 333
BLAST of TIA-1-related RNA binding protein vs. Planmine SMEST
Match: SMESG000055074.1 (SMESG000055074.1) HSP 1 Score: 447.588 bits (1150), Expect = 3.338e-157 Identity = 207/294 (70.41%), Postives = 246/294 (83.67%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQN---PASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGP 909 M NN+ IYVGNLP + DQLL+ +FG+FGQC+ CHI+RDFS Q NPYAFIE+ +H +ASLA++ M+ I +W +Q+KVNW+SG PA+ +T+ K+DYS ++QIFVGDIGLDV+E MLK+ FSQFG +ID KVVRYPDGQS+GFAF+SF+NR +AE AI SMHKTW HNRTIKCNWATRNG D EQF +YTPRPYELVYKEAPLTNTNVYVAG ENLTEEL+ CHF+EFGRIDSVKV+P+K +AFIN+ THEAAARAISQRHGYKIN+NV+KCNWGKENF ST P Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVNWSSGPSTIPGPAA-VTSAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAG--ENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFAISTSTMPP 291
BLAST of TIA-1-related RNA binding protein vs. Planmine SMEST
Match: SMESG000055075.1 (SMESG000055075.1) HSP 1 Score: 446.047 bits (1146), Expect = 1.901e-156 Identity = 206/294 (70.07%), Postives = 245/294 (83.33%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQN---PASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGP 909 M NN+ IYVGNLP + DQLL+ +FG+FGQC+ CHI+RDFS Q NPYAFIE+ +H +ASLA++ M+ I +W +Q+KVNW+SG PA+ +T+ K+DYS ++QIFVGDIGLDV+E MLK+ FSQFG +ID KVVRYPDGQS+GFAF+SF+NR +AE AI SMHKTW HNRTIKCNWATRNG D EQF +YTPRPYELVYKEAPLTNTNVYVAG ENLTEEL+ CHF+EFGRIDSVKV+P+K +AFIN+ THEAAARAISQRHGYKIN+NV+KCNWGKENF S P Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVNWSSGPSTIPGPAA-VTSAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAG--ENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFAISTSAMPP 291
BLAST of TIA-1-related RNA binding protein vs. Planmine SMEST
Match: SMESG000044648.1 (SMESG000044648.1) HSP 1 Score: 434.106 bits (1115), Expect = 8.079e-152 Identity = 204/286 (71.33%), Postives = 241/286 (84.27%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKVNWASGSQ--NPASNITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATRNGTDEEQFKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGF 888 MD NN+ IYVGNLP ITD LLL +FG+FGQC CHI+RDFSGQ NPYAFIE+ H AASLA+A M+ I +W +Q+KVNW+SG+ A IT K+DYS IQIFVGDIGLDV+E MLK+ FS+FGS+ID KVVRY DGQS+GFAF++++ R+DAE AI +MHKTW HNRTIKCNWATRNG D +QF +YTPRPYELVYKEAPLTNTNVY+AGI E +TEEL+R HFEEFGRID+VK++ +KA+AFIN+ THEAAARAISQRHGYKIN +V+KCNWGKENFGF Sbjct: 1 MDIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCASCHIIRDFSGQTNPYAFIEYTNHSAASLALAAMDGIYMWNNQIKVNWSSGNSLGTAAPAITASKIDYSNTIQIFVGDIGLDVDESMLKEGFSKFGSVIDAKVVRYQDGQSRGFAFVAYSRREDAEKAIENMHKTWFHNRTIKCNWATRNGLDGDQFIKYTPRPYELVYKEAPLTNTNVYIAGIPEGITEELIRVHFEEFGRIDAVKIYQEKAHAFINFVTHEAAARAISQRHGYKINESVIKCNWGKENFGF 286
BLAST of TIA-1-related RNA binding protein vs. Planmine SMEST
Match: SMESG000044649.1 (SMESG000044649.1) HSP 1 Score: 259.61 bits (662), Expect = 4.522e-82 Identity = 143/301 (47.51%), Postives = 193/301 (64.12%), Query Frame = 1 Query: 37 MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAFIEFNEHQAASLAVAGMNNISLWGHQLKV--NWASGSQNPASN-ITNVKVDYSKAIQIFVGDIGLDVNEQMLKDAFSQFGSIIDVKVVRYPDGQSKGFAFLSFTNRQDAENAITSMHKTWLHNRTIKCNWATR----NGTDEEQ---FKQYTPRPYELVYKEAPLTNTNVYVAGITENLTEELVRCHFEEFGRIDSVKVFPDKAYAFINYSTHEAAARAISQRHGYKINNNVVKCNWGKENFGFGPSTTGP 909 M+ NNK IYV NLP I+++ LL++FG FG C+ C + + S A+IEF+ +A A+A MN+ + +Q+ V + QN A + + KVDYS +QIFVG IG D++E LKD FS G +ID KVVR PDGQ KGFAF+SF+N +A AI SM+ T HNR I+CNWAT+ NG + F Q T E+ Y EAP TNT+VYV + ENL+E+++R FE FG+I ++K FP+K +AF+NY TH+AAA AI Q +GYKIN+ +KCNWGK+N G + P Sbjct: 1 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEASAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISY-EAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKP 292 The following BLAST results are available for this feature:
BLAST of TIA-1-related RNA binding protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of TIA-1-related RNA binding protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010729 ID=SMED30010729|Name=TIA-1-related RNA binding protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1329bpback to top protein sequence of SMED30010729-orf-1 >SMED30010729-orf-1 ID=SMED30010729-orf-1|Name=SMED30010729-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=355bp MDPTNNKCIYVGNLPHEITDQLLLTVFGHFGQCVGCHIMRDFSGQINPYAback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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