Serine/threonine-protein kinase B-raf
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010702 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13
Homology
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Zebrafish
Match: si:dkey-8l13.5 (si:dkey-8l13.5 [Source:ZFIN;Acc:ZDB-GENE-141216-349]) HSP 1 Score: 67.781 bits (164), Expect = 4.133e-11 Identity = 85/391 (21.74%), Postives = 149/391 (38.11%), Query Frame = 3 Query: 78 RNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQHPNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKF-EVLREEEKKEIFKMSEWALNPNSIDHESYLLGKVYPETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVAT--DYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRD 1241 +N + ++ S +L +KN +I TL +K+ DS+ FN+I F+ W M PC+ + + A W+ + +F A+ A +P ++ + + P+ + + L + R P H +I + + ++ TRG+ + L+S + + ++++STD ++ E+ + F +V + + W N S + +V T P KRV A R+ +G YYLG I Q L+ + F F+ T Q T D+++L A SI+PGD VLAP + + RY G V++G RD Sbjct: 22 KNISFVLDCSEGMSGVLGAVKNLIIQTLLTKASLRDSL-FNIISFSYKATPWSSRMLPCSPDVVYEALSWIHTLQTSSGRDFHTALALAFSDPACHSVHLVTSSVPDNPTQCLASLSTMVTR--PVHTFYISDKTSINSDTSD---FLQCLSSTTRGSCYIMALNSAGGVEEV----SLLHSTDDSIQKTTYAEDTLHSMDFNQVPYYNCTSCVCSIPYWCSPVNPFSTASCVSARVMQATELFPG---KRVLA---------------------------------------RREMDGFYYLGTIIHQGTGNLYMVEFDKSGMNGNTFMETLNIVQPTCQPDMVNLAIAHGHSIVPGDTVLAP------WEPEMRRYGPGRVIYGVEPRD 354
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Zebrafish
Match: si:dkey-8l13.5 (si:dkey-8l13.5 [Source:ZFIN;Acc:ZDB-GENE-141216-349]) HSP 1 Score: 55.4546 bits (132), Expect = 1.861e-7 Identity = 38/110 (34.55%), Postives = 53/110 (48.18%), Query Frame = 3 Query: 918 AASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVAT--DYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRD 1241 A + G+ VLAR+ +G YYLG I Q L+ + F F+ T Q T D+++L A SI+PGD VLAP + + RY G V++G RD Sbjct: 3 ATELFPGKRVLARREMDGFYYLGTIIHQGTGNLYMVEFDKSGMNGNTFMETLNIVQPTCQPDMVNLAIAHGHSIVPGDTVLAP------WEPEMRRYGPGRVIYGVEPRD 106
BLAST of Serine/threonine-protein kinase B-raf vs. TrEMBL
Match: K1QR88 (von Willebrand factor A domain-containing protein 3B OS=Crassostrea gigas OX=29159 GN=CGI_10014264 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.392e-49 Identity = 152/513 (29.63%), Postives = 243/513 (47.37%), Query Frame = 3 Query: 27 LISKMSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQH-PNQEIKEILDLFAYIGRKIPCH-IRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQL----------HIMQSTKNIMNSTDLITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPNSI-DHESYLLGKVYPETHYKPFQF-----WKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLY-KVPNYPLNSLPGYPTSG 1508 LI K+ I TIF V RN +CI+ S + + L +K H++ TL +++ + M FN+I FNS+V +W M CT E + AA W++ + + N GA+++AL + NC +IVT P+Q ++ILD G P H I LC NT I+ E +A E+ G+F V L + H + MN T N +N + ++ EE + +P+ + D Y + + P+++ W R ++ ++ + ++ M + S S A ++++G++VLAR+ +G +Y+G ++ Q+ ++ F + FGP G++ T YQ+T + D+ID DA + +I GDRVLA P + R+ G V+ G E + +D P ++ I T KTEKV D I+ PE ++RL LE MPK AR L + P+YP +L GYPTSG Sbjct: 36 LIPKIKGIPTIFGEVLERNVTFCIDTSGSMYKGLDVVKEHLVETLLKQANKPNCM-FNIIEFNSEVTQWADKMVKCTPETVAVAATWVKKLSAKTGTNTQGALLTALSD-RNCEAVYIVTDGLPDQHPQDILDQVGLAGHNRPIHCIYLCSEDNTDQVSIEFLED----LAVESFGSFHIVTLTVHGCVERITPIYRADHAHERIIRTMNGT------IHNSTKNCGVSTTLLVDPEESLRLTPRVSLLGHPHPVPDPLGYPYWDTWKNWFFHPYRYYYPHGWSRYRPARGWLKA----QDQMMSSMENSSVSPAAGALLIGKKVLARRIDDGYFYIGTVQSQILSDKFLVAFGPCK--HGKYNETKYQDTFIFDIIDYEDAKRHTIQTGDRVLA--TWEPEGE----RFCPGVVIEG----------------QEKRQVDGP----DDRQITVTFANGKTEKVPMDVAIWTPEQVYERLTLELKMPKEARLSLQNQEPHYPKENLEGYPTSG 504
BLAST of Serine/threonine-protein kinase B-raf vs. TrEMBL
Match: A0A3S1AFC3 (VWFA domain-containing protein OS=Elysia chlorotica OX=188477 GN=EGW08_001840 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.239e-47 Identity = 146/521 (28.02%), Postives = 243/521 (46.64%), Query Frame = 3 Query: 54 TIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGD-SMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQH-PNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKF--EVLREEEKKEIFKMS-----EWALNP--NSIDHESYLLG--------KVYPETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYK-VPNYPLNSLPGYPTSGSKKIPDDFTFTNPNVL 1556 T+F V + +CI+ S + LP +K H++ TL S S D ++ FNLI FNS V +W + CT E + A W++ + + N A+++A +P C ++VT P+Q ++E+LD H V G + + +A ET G+ LHI+ T + + +T + +D +E I + LR K S E L P NS+ + LG PE +Y P +W R ++++++ + + + ++ +G SV+VG+ VLAR+ +G +Y+ ++ Q E F + FGP G++ T YQ+T + D++D DA++ +I+ GDRVLA P P + RY G VL G E ++ + P ++L + F++ KTE+V D +++P ++RL LE MP+ AR+ L V NYP+ +LPGYP SG P ++ P+ + Sbjct: 67 TMFGLVPEKRVTFCIDTSGSMFKSLPVVKEHLMETLHSLSKFRDETVMFNLIEFNSQVTQWADKLVQCTPETVAVAGQWVKALSAKTGTNTQDALLAAFADP-TCQSVYLVTDGPPDQYVEEVLDRVVAASGPRTVHCVYVVTGEAADEAVVE---FLEDLAVETFGS-----------LHIV--TLTLHGCVERVTPIYRSDHAHERIVRTVNNTLRPSVKACSVATSLQIDPEEILAPRLNSLVYPHPYLGYHVSPALVSTMPERYYYP-HYWSRYRPAKAWLEAQDKLVDPRLAGLSPAAG-----SVLVGKRVLARRIEDGYFYMATVQSQNLGEKFLVAFGPCK--HGKYKQTQYQDTYVFDIVDHQDALRHTILTGDRVLA--PWEPEGE----RYAPGIVLSG----------------QEKRHAEGP--EDQDLTVSFSN--GKTERVPRDVAVWLPSSLYERLSLELQMPQEARKTLLSAVDNYPIENLPGYPASGPVGNPPEYPTIEPSFV 536
BLAST of Serine/threonine-protein kinase B-raf vs. TrEMBL
Match: V3ZVM7 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_236029 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.732e-47 Identity = 169/616 (27.44%), Postives = 278/616 (45.13%), Query Frame = 3 Query: 57 IFETVSSRNKIYCIEASAATHSILPYIKNHVIHTL-KSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQH-PNQEIKEILDLFAYIGRKIPCHIRLCV-LGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQST-----KNIMNSTD-----------LITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPNSIDHESYLLGKVYPETHYKPFQFWKRVSASQSFMDCL-RNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYKVPNYPLNSLPGYPTSGSKKIPDDFTFTNPNVLKSRTLQIDXXXXXXXXXXXXVIEIFDKDDRTGNILTKSDWASGNVIKKSNMHKKNETLVPESIYTISELQLKVKDQLETFKDLPESRMNPEKPFLL 1844 IF+ V + +C++ S + ++ L +K ++ L K H S FN++ FNS + +W M CT E + A+ W+ + + N + A++ A +P C ++VT P+Q +EILD Y+ P H CV L DE +A +A ET G+F + + + + N + STD + T ++++ E+ + ++ +NP Y+ V +Y P +W R ++ ++ + ++E+ +M S A ++++G+EVLAR+ +G +Y G ++ Q+ F + FGP G++ T YQET + D++D DA +R+++ GD+VL+P P D F G V+ G R+ +EG + + + + F++ KTEKV D ++IPEP + RL LE MP+S REKL PNYPL +LPGYPTSG P + VL+S + P PV I+ K T V+K ++H L+P + T EL+ +V QL K L + R N + LL Sbjct: 23 IFDNVVEESVTFCVDTSGSMYNCLHVVKEQLVEALYKHVKHSSGSPLFNIVEFNSQITQWSDKMVKCTPETVAVASKWIDELSAKTGTNTMDALLIAFGDP-ECKAVYLVTDGLPDQNPEEILDHVGYVDNDRPVH---CVYLMGEKADE--SATEFLEDLAIETYGSFFIASITTKGAIEKLTPVFKAEHSNYLKSTDNNLFSKIKQCNVSTTLAADPIESAYLNS-------------RLVSPVINP-------YVFPPVQGYRYYHP-SYWSRYRPAKGWLKMQDKLLDEAQALEM-----SPAAGALLIGKEVLARRNEDGYFYSGSVQSQIYENKFLVAFGPCK--HGKYKDTTYQETMVHDILDYVDAKRRTVVTGDKVLSP--WEPEGDKFG----PGVVIDGFEKRE-----------SEGPD-------DKGITVAFSN--GKTEKVAPDTAVWIPEPMYDRLKLELNMPRSTREKLASQPNYPLENLPGYPTSGPIAYPQKYPKPVSLVLES---DVPLNSFHRYPPYAPVYPIYLKRSEPKKHKT--------VVKSEDVH----ALIPGTQLTTKELEDRVSSQLMEHKLLLDERENEKNGRLL 563
BLAST of Serine/threonine-protein kinase B-raf vs. TrEMBL
Match: A0A2C9JKB2 (VWFA domain-containing protein OS=Biomphalaria glabrata OX=6526 GN=106057627 PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.096e-45 Identity = 157/525 (29.90%), Postives = 257/525 (48.95%), Query Frame = 3 Query: 54 TIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQH-PNQEIKEILDLFAYI--GRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKFEVLREEE--KKEIFKMSEW--ALNPNSIDHESYLLGKVYP--------ETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYKVP-NYPLNSLPGYPTSGSKKIPDDFTFTNPNVLKSRTLQID 1580 T+F V + +CI+ S + L +K H++ TL S + FNLI FNS V +W M CT E + A W++ + + N A+++AL +PL C ++VT P+Q +++LD I R++ C + + G T DE A +A ET G+F V L + + + +S + I + + N+ NIK+ + + +E M + AL N H S L+G V P + Y+P + W + S QSFMD L + S A S+++G++V+AR+ +G +Y ++ Q +E F + FGP G+++ T+YQ+T + D++D +DA+ SII GD VLA P P+ + R+ GTV+ G +E ++ + P + L + FT + TEKV + ++IP + RL LE MPK AR+ L NYP+++LPGYPTSG+ P ++ +P +++S + D Sbjct: 79 TMFGRVIENSVTFCIDTSGSMFKYLDVVKQHLMETLLSLAAREYQPMFNLIDFNSQVTRWADKMVKCTPETVAVAEKWIKELQAKTGTNTQDALLTALSDPL-CEAIYLVTDGLPDQYPEDVLDSIVGICGNRRVHC---IYITGET-ADE--TATEFLEDLAVETFGSFHIVTLTTHGCIERITPIYRSDHSHEKI-VQTVNNTLRPNIKRCSIATSLQINPEETLNMVPYTRALLYNWGPHISPLIG-VGPARYYYPYYWSRYRPAKAWLK-SQEQSFMDPLLGL-------------SPAAGSLLIGKKVVARRIDDGFFYRATVQSQNLDEKFLVAFGPCK--HGKYLQTEYQDTYVFDIVDYHDALHHSIITGDNVLA--PWEPDGE----RFAPGTVIEG----------------HEKRHAEGP--DNVQLTVLFTHGI--TEKVPLNTAVWIPPSVYDRLSLELQMPKEARKTLLSCSDNYPIDNLPGYPTSGTLGDPPEYPTADPFIVESNSFLWD 552
BLAST of Serine/threonine-protein kinase B-raf vs. TrEMBL
Match: A0A210Q6Z3 (von Willebrand factor A domain-containing protein 3B OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT07029 PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.859e-45 Identity = 142/512 (27.73%), Postives = 240/512 (46.88%), Query Frame = 3 Query: 48 IETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQH-PNQEIKEILDLF--AYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIK-----KFEVLREEEKKEIFKMSEWALNP----NSIDHESYLLGKVYPETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYKVPNYPLNSLPGYPTSGSKKIPDDFTFTNP 1547 I TIF +N +C++ S + L +K H++ TL + FN+I FNS+V +W M C++E + AA+W++ + + N L A+++AL E C ++VT P+Q +ILD A GR I C I LC T I+ E ++ E+ G+F V L + + ++ + I + N + +V EE ++S + P N H ++ + P +Y P W + ++ ++ ES + + + S A ++++ ++VLAR+ +G +YLG +K Q+ + F + FGP G++ T YQ+T + DL+D DA + +I D+VLAP P + R+ G V+ G +E + + P H + + F++ +TEK+ D +++PE ++RL LE MP+ ARE L P+YPL +LPGYPTSG P + +P Sbjct: 8 IPTIFGETFEKNVTFCVDTSGSMFKGLGVVKEHLVETLLKHARKSQPTSFNIIEFNSEVTQWADKMVKCSAETVEVAAEWVKRLSAKTGTNTLDALLTAL-EDRGCESVYLVTDGLPDQHPVDILDQVTNAVRGRPIHC-IYLCAEDAMDTSAIEFLED----LSVESYGSFHIVSLTQHGCVERVTPIYRADHAHERIVRTINGTLHNHGKQCSVATTLKVDPEESLALTPRVSSFNSYPGFPGNPYGHLAWGHWFMQPHRYYFP-NGWSQYRPARGWLKS----QESMMDHIENSGVSPAAGALLISKKVLARRIDDGYFYLGKVKSQILGDKFLVAFGPSK--PGKYKETTYQDTFVYDLVDYEDAKRHTINTSDKVLAP--WEPQGE----RFGPGVVIEG----------------HEKRGSEGPDDH--QITVTFSN--GRTEKIPSDMALWVPEEVYERLVLELKMPREARETLQTNPHYPLENLPGYPTSGPTAEPRVYEQPHP 480
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Cavefish
Match: si:dkey-8l13.5 (chromosome 18 C11orf16 homolog [Source:NCBI gene;Acc:103047275]) HSP 1 Score: 52.7582 bits (125), Expect = 1.661e-6 Identity = 69/329 (20.97%), Postives = 115/329 (34.95%), Query Frame = 3 Query: 78 RNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQHPNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQ---LDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPNSIDHESYLLGKVYPETHYKPFQ------FWKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNE--LFNIVF 1031 RN ++ S A ++L +KN ++ TL +K+ +S+ FN+I F+ V W M PC + + A W+ + + L A+ +A +P C +VT N++ D +N + S TF + LDSD + T S + + S + E + +L E + I S+ + HY P +W + S C+ ++ G A G VLAR+ +G YYLG I Q+ + F + F Sbjct: 16 RNVTLILDTSEAMTAVLGTVKNLIVQTLLAKASLRNSL-FNIITFSYKVTPWSDHMVPCAPDTVYEALGWIHTLTTSPGKDLLTALTTAFSDPA-CQSVHLVT-------------------------------NSLPDNPENCLSALSTCGTRPVHTFHIAEKQALDSDTLDFLKCLTSATRGSCYRLNLNSGSTAE-----QVALLHSAEHQ--------------IQEPSFSENRCCRALHYNPMHAVCLSPYWGSLRNPFSATPCIS-------ARLMRG------AEFYPGCRVLARREADGFYYLGTIVHQLQDRGGFFMVAF 279
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Nematostella
Match: EDO41655 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3S3]) HSP 1 Score: 70.4774 bits (171), Expect = 5.840e-14 Identity = 44/168 (26.19%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 54 TIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQHPNQEIKEILDLFAYIGRKIPCH-IRLCVLGNTITDEIKNAETVYSQIAKETRGTF 554 TIF + RN ++ ++ S + + L ++ H+I L ++ G FN+I FN +V KW M CT ++ A++W+ + S N +GA++ A + I + P+Q I++ + + P H I LC + A +AKET G+ Sbjct: 14 TIFGNILERNVVFLLDTSGSMYHCLDVVREHLIEILFFRATSGRDTMFNVIEFNEEVTKWADRMVQCTPRTVSVASEWINKLQCGTSTNTMGALLEAYDDDGMQAIYLVTDGMPDQRPGIIMENVRKLHKGRPIHAIYLCGAKADVA-----AVEFLEDLAKETNGSL 176
BLAST of Serine/threonine-protein kinase B-raf vs. Planmine SMEST
Match: SMESG000064517.1 (SMESG000064517.1) HSP 1 Score: 1484.55 bits (3842), Expect = 0.000e+0 Identity = 746/751 (99.33%), Postives = 748/751 (99.60%), Query Frame = 3 Query: 39 MSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQHPNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPNSIDHESYLLGKVYPETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMAHGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYKVPNYPLNSLPGYPTSGSKKIPDDFTFTNPNVLKSRTLQIDXXXXXXXXXXXXVIEIFDKDDRTGNILTKSDWASGNVIKKSNMHKKNETLVPESIYTISELQLKVKDQLETFKDLPESRMNPEKPFLLKGASKKVENDARVAKTVHIKSNEKLLTSPARKVQIDSEPLVEINAPKKSSSLQSLVIQEEYFEDLRKIRESVNEDKDYXXXXXXXXXXXXXXVAEDGVKRILVPQSGQLFQKSFTGKLEVQNSNVVYITDIGEKDKERETVEKIKLQRQ 2291 MSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGA+VSALKEPLNCNICFIVTQHPNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPNSIDHESYLLGKVYPETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMA GSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYKVPNYPLNSLPGYPTSGSKKIPDDFTFTNPNVLKSRTLQIDYLMPPYCLPLYPVIEIFDKDDRTGNILTKSDWASGNVIKKSNMHKKNETLVPESIYTISELQLKVKDQLETFKDLPESRMNPEKPFLLKGA+KKVENDARVAKTVHIKSNEKLLTSPARKVQIDSEPLVEINAPKKSSSLQSLVIQEEYFEDLRKIRESVNEDKDYSSSSYSRRPSRNRSVAEDGVKRILVPQSGQLFQKSFTGKLEVQNSN VYITDIGEKDKERETVEKIKLQR Sbjct: 1 MSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGALVSALKEPLNCNICFIVTQHPNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAFVQLDSDNQLHIMQSTKNIMNSTDLITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPNSIDHESYLLGKVYPETHYKPFQFWKRVSASQSFMDCLRNINESNVTKMAQGSGSKLAASVIVGREVLARKYTNGQYYLGYIKDQVNNELFNIVFGPYNWGMGQFVATDYQETKLLDLIDLNDAMKRSIIPGDRVLAPDPTSPNKDAFLCRYITGTVLHGSVIRDYSTARIPVTDTNEGKNIDAPIKHSENLIIEFTSPLSKTEKVVGDKVIYIPEPFFQRLCLESAMPKSAREKLYKVPNYPLNSLPGYPTSGSKKIPDDFTFTNPNVLKSRTLQIDYLMPPYCLPLYPVIEIFDKDDRTGNILTKSDWASGNVIKKSNMHKKNETLVPESIYTISELQLKVKDQLETFKDLPESRMNPEKPFLLKGANKKVENDARVAKTVHIKSNEKLLTSPARKVQIDSEPLVEINAPKKSSSLQSLVIQEEYFEDLRKIRESVNEDKDYSSSSYSRRPSRNRSVAEDGVKRILVPQSGQLFQKSFTGKLEVQNSNAVYITDIGEKDKERETVEKIKLQRH 751 HSP 2 Score: 280.026 bits (715), Expect = 2.870e-80 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 2291 IERRLKEEQSRFCQEEMNKDRHVYFQKQKTAARIHKENLIRQSEQEAIDKAQSLKRSVLSEVENKVKSVEPLPPSYDDVDKKRIEGLKNRMAQRNNDMEKRNQDALKYIEKQELSKRNRSDERWWKAQNQMLKEYPA 2701 IERRLKEEQSRFCQEEMNKDRHVYFQKQKTAARIHKENLIRQSEQEAIDKAQSLKRSVLSEVENKVKSVEPLPPSYDDVDKKRIEGLKNRMAQRNNDMEKRNQDALKYIEKQELSKRNRSDERWWKAQNQMLKEYPA Sbjct: 755 IERRLKEEQSRFCQEEMNKDRHVYFQKQKTAARIHKENLIRQSEQEAIDKAQSLKRSVLSEVENKVKSVEPLPPSYDDVDKKRIEGLKNRMAQRNNDMEKRNQDALKYIEKQELSKRNRSDERWWKAQNQMLKEYPA 891
BLAST of Serine/threonine-protein kinase B-raf vs. Planmine SMEST
Match: SMESG000009195.1 (SMESG000009195.1) HSP 1 Score: 52.373 bits (124), Expect = 4.785e-7 Identity = 35/147 (23.81%), Postives = 68/147 (46.26%), Query Frame = 3 Query: 27 LISKMSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKE-PLNCNICFIVTQ-HPNQEIKEILDLFAYI--GRKIPC 455 L + + ++TIF ++ RN +C + S + + + + H++ L + KFN+I FNS V ++ C + I W+ E + L AI+ + ++ P ++ +++T N+E +L +I GR I C Sbjct: 22 LRTSLKLVKTIFGEITERNVTFCFDYSGSMYRYFHHFREHLLEALFKMLLSKNGQKFNIILFNSSVHQFASRHVDCVQDNIVDVIRWMNKPSYESKTDILAAIIKSFEDFP---DVVYLITDGFINKERATLLGNLPHISKGRPINC 165
BLAST of Serine/threonine-protein kinase B-raf vs. Planmine SMEST
Match: SMESG000009195.1 (SMESG000009195.1) HSP 1 Score: 53.1434 bits (126), Expect = 1.096e-6 Identity = 34/146 (23.29%), Postives = 67/146 (45.89%), Query Frame = 3 Query: 27 LISKMSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQ-HPNQEIKEILDLFAYI--GRKIPC 455 L + + ++TIF ++ RN +C + S + + + + H++ L + KFN+I FNS V ++ C + I W+ E + L AI+ + ++ ++ +++T N+E +L +I GR I C Sbjct: 22 LRTSLKLVKTIFGEITERNVTFCFDYSGSMYRYFHHFREHLLEALFKMLLSKNGQKFNIILFNSSVHQFASRHVDCVQDNIVDVIRWMNKPSYESKTDILAAIIKSFED--FPDVVYLITDGFINKERATLLGNLPHISKGRPINC 165
BLAST of Serine/threonine-protein kinase B-raf vs. Planmine SMEST
Match: SMESG000009195.1 (SMESG000009195.1) HSP 1 Score: 53.1434 bits (126), Expect = 1.097e-6 Identity = 34/146 (23.29%), Postives = 67/146 (45.89%), Query Frame = 3 Query: 27 LISKMSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQ-HPNQEIKEILDLFAYI--GRKIPC 455 L + + ++TIF ++ RN +C + S + + + + H++ L + KFN+I FNS V ++ C + I W+ E + L AI+ + ++ ++ +++T N+E +L +I GR I C Sbjct: 22 LRTSLKLVKTIFGEITERNVTFCFDYSGSMYRYFHHFREHLLEALFKMLLSKNGQKFNIILFNSSVHQFASRHVDCVQDNIVDVIRWMNKPSYESKTDILAAIIKSFED--FPDVVYLITDGFINKERATLLGNLPHISKGRPINC 165
BLAST of Serine/threonine-protein kinase B-raf vs. Planmine SMEST
Match: SMESG000047774.1 (SMESG000047774.1) HSP 1 Score: 52.7582 bits (125), Expect = 1.698e-6 Identity = 55/246 (22.36%), Postives = 103/246 (41.87%), Query Frame = 3 Query: 57 IFETVSSRNKIYCIEASAATHSILPYIKNHVIHTLKSKSHHGDSMKFNLICFNSDVAKWCVSMAPCTSEYITAAADWLRHILPEGSCNFLGAIVSALKEPLNCNICFIVTQ-HPNQEIKEILDLFAYIGRKIPCHIRLCVLGNTITDEIKNAETVYSQIAKETRGTFAF-------VQLDSDNQLHIMQS-------TKNIMNSTDLITIVSSNDEENENIKKFEVLREEEKKEIFKMSEWALNPN 749 +F T+ I+ SA+ + ++K+ + ++ + H K N + FN+ W + T + +A WL + +GS N L A+ A+K+ NC +++T P+Q K +L +I RL + + A T ++A+ET G F + ++N+L +S ++ + L + DE ++ K EV+R++E+K K N N Sbjct: 562 LFGTIMEDQVYILIDISASMEPHISFVKDKLYTLIQEQLRHKS--KINFVAFNTKALPWRDRLVDVTEANLKSAWQWLEGLTCQGSTNTLSALQFAIKD-RNCQGIYLLTDGRPDQPTKTVLS-------QIRLQYRLPIHTISFNCADLEANTFLCELARETGGRFHYFNEISGGADCTNENELEAWESEDIKLLKSEYRLGFDSLEKVTKLRDECHKLAWKSEVVRKKEQKSTRKTMAPGCNQN 797 The following BLAST results are available for this feature:
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Serine/threonine-protein kinase B-raf vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Serine/threonine-protein kinase B-raf vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010702 ID=SMED30010702|Name=Serine/threonine-protein kinase B-raf|organism=Schmidtea mediterranea sexual|type=transcript|length=2894bpback to top protein sequence of SMED30010702-orf-1 >SMED30010702-orf-1 ID=SMED30010702-orf-1|Name=SMED30010702-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=122bp MNKDRHVYFQKQKTAARIHKENLIRQSEQEAIDKAQSLKRSVLSEVENKVback to top protein sequence of SMED30010702-orf-2 >SMED30010702-orf-2 ID=SMED30010702-orf-2|Name=SMED30010702-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=768bp RFYELKFLLISKMSYIETIFETVSSRNKIYCIEASAATHSILPYIKNHVIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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