Tetraspanin

Overview


Name	Tetraspanin
Smed ID	SMED30010631
Length (bp)	1292

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Tetraspanin (SMED30010631) t-SNE clustered cells

Violin plots show distribution of expression levels for Tetraspanin (SMED30010631) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Tetraspanin (SMED30010631) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Tetraspanin (SMED30010631) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30010631

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30010631	SMESG000055436.1	SmedASXL_012583	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
head region	SMED30010631	SMESG000055436.1	dd_Smed_v6_13296_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
epidermis	SMED30010631	SMESG000055436.1	dd_Smed_v4_13296_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017
ventral epidermis	SMED30010631	SMESG000055436.1	dd_Smed_v4_13296_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Tetraspanin vs. Ensembl Human
Match: CD151 (CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630])

HSP 1 Score: 50.447 bits (119), Expect = 7.969e-7
Identity = 30/110 (27.27%), Postives = 51/110 (46.36%), Query Frame = 3

Query:  372 LLLTFITVLIICEIMLIAIAGVSMAFNQ--NFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            L   +I V+    +M+  + G    F +  N +      L ++++ T         +  VT+A+DQ+QQ+  CCG++ +    + W   + S WI  Q  G   VP SCC
Sbjct:   58 LATAYILVVAGTVVMVTGVLGCCATFKERRNLLRLLNTELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNS----QDW---RDSEWIRSQEAGGRVVPDSCC 160

[Close]

BLAST of Tetraspanin vs. Ensembl Human
Match: CD53 (CD53 molecule [Source:HGNC Symbol;Acc:HGNC:1686])

HSP 1 Score: 48.521 bits (114), Expect = 6.096e-6
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASG 599
            MVVAF+G  GS + + CLL++F  +L+I  +  + +A +   + Q    Y    LTDSI R +        ++    A D +Q  L CCG +G
Sbjct:   64 MVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTDSIHRYH-------SDNSTKAAWDSIQSFLQCCGING 149

[Close]

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASG 599
            MVVAF+G  GS + + CLL++F  +L+I  +  + +A +   + Q    Y    LTDSI R +        ++    A D +Q  L CCG +G
Sbjct:   64 MVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTDSIHRYH-------SDNSTKAAWDSIQSFLQCCGING 149

[Close]

BLAST of Tetraspanin vs. Ensembl Human
Match: CD151 (CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630])

HSP 1 Score: 48.521 bits (114), Expect = 7.482e-6
Identity = 27/87 (31.03%), Postives = 44/87 (50.57%), Query Frame = 3

Query:  435 VSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            ++ A+ Q      + NL D++ + Y        +  VT+A+DQ+QQ+  CCG++ +    + W   + S WI  Q  G   VP SCC
Sbjct:  110 LAYAYYQQLNTELKENLKDTMTKRY----HQPGHEAVTSAVDQLQQEFHCCGSNNS----QDW---RDSEWIRSQEAGGRVVPDSCC 185

[Close]

BLAST of Tetraspanin vs. Ensembl Celegans
Match: tsp-17 (Tetraspanin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q11098])

HSP 1 Score: 66.2402 bits (160), Expect = 5.429e-12
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASG-NGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            ++V F+GLCG+  RS  LLL F+  LI   +  +A+  +S+ F ++ +   + N+ + ++  YGV T    N  VT  ID++Q    CCG+ G   Y    WS    ST    +    P  P+SCC
Sbjct:   73 LLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSL-FYKDKVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWS---QSTNQDSEEIESPLFPVSCC 194

[Close]

BLAST of Tetraspanin vs. Ensembl Celegans
Match: tsp-17 (Tetraspanin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q11098])

HSP 1 Score: 58.9214 bits (141), Expect = 1.939e-9
Identity = 48/159 (30.19%), Postives = 68/159 (42.77%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSM----AFNQNFINYFEANLT--------------DSIQ---------------RTYGVSTEITRNSEVTTAIDQMQQQLSCCGASG-NGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            ++V F+GLCG+  RS  LLL F+  LI   +  +A+  +S+     F+ N++  +  NLT              D+IQ                 YGV T    N  VT  ID++Q    CCG+ G   Y    WS    ST    +    P  P+SCC
Sbjct:   73 LLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKFSNNYMGVYLKNLTYNRYSRDRWVLPLMDTIQFYVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWS---QSTNQDSEEIESPLFPVSCC 228

[Close]

BLAST of Tetraspanin vs. Ensembl Celegans
Match: tsp-17 (Tetraspanin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q11098])

HSP 1 Score: 51.9878 bits (123), Expect = 2.618e-7
Identity = 47/169 (27.81%), Postives = 68/169 (40.24%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSM----AFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYG--PPYVPLSCCALQSNQVINAAFCQGTTQIGSPPAP-PIANSSTVNNYL 806
            ++V F+GLCG+  RS  LLL F+  LI   +  +A+  +S+     F+ N++  +  NLT             +R+  V   +D +Q    CCG  G          YK S W +         +VP SCC                 Q+G   AP PI    T   YL
Sbjct:   73 LLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKFSNNYMGVYLKNLT---------YNRYSRDRWVLPLMDTIQFYHQCCGGEGP-------LDYKDSFWYITNTLRGTRSFVPPSCCK--------------QAQVGRAWAPVPIDPMCTTYRYL 211

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp96F (gene:FBgn0027865 transcript:FBtr0330163)

HSP 1 Score: 58.5362 bits (140), Expect = 3.169e-9
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = 3

Query:  330 AFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFN--QNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNG 605
            AF G CG  + S CLL++F  V++I  +M+  IA  + AF+      +   A +  S+Q  YG ST  +R    T   D +Q+ L CCGA G G
Sbjct:   70 AFFGCCGVCRESQCLLVSFFCVILI--VMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSR----TVTFDTLQKNLKCCGADGPG 157

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp96F (gene:FBgn0027865 transcript:FBtr0330164)

HSP 1 Score: 58.151 bits (139), Expect = 3.622e-9
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = 3

Query:  330 AFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFN--QNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNG 605
            AF G CG  + S CLL++F  V++I  +M+  IA  + AF+      +   A +  S+Q  YG ST  +R    T   D +Q+ L CCGA G G
Sbjct:   70 AFFGCCGVCRESQCLLVSFFCVILI--VMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSR----TVTFDTLQKNLKCCGADGPG 157

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp96F (gene:FBgn0027865 transcript:FBtr0084912)

HSP 1 Score: 58.151 bits (139), Expect = 3.622e-9
Identity = 35/94 (37.23%), Postives = 50/94 (53.19%), Query Frame = 3

Query:  330 AFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFN--QNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNG 605
            AF G CG  + S CLL++F  V++I  +M+  IA  + AF+      +   A +  S+Q  YG ST  +R    T   D +Q+ L CCGA G G
Sbjct:   70 AFFGCCGVCRESQCLLVSFFCVILI--VMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQEEYGQSTMSSR----TVTFDTLQKNLKCCGADGPG 157

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp86D (gene:FBgn0037848 transcript:FBtr0330150)

HSP 1 Score: 49.6766 bits (117), Expect = 2.796e-6
Identity = 35/123 (28.46%), Postives = 60/123 (48.78%), Query Frame = 3

Query:  327 VAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            V+F G  G+ + ++ LL  +   L++  I+ +++A +   F Q   ++ E   TD I  +Y        +S++   ID  QQ+ +CCG S  GY   S + Y + +    +  G PY   SCC
Sbjct:   94 VSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSY------RDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPY---SCC 207

[Close]

BLAST of Tetraspanin vs. Ensembl Fly
Match: Tsp86D (gene:FBgn0037848 transcript:FBtr0306640)

HSP 1 Score: 48.521 bits (114), Expect = 5.326e-6
Identity = 35/123 (28.46%), Postives = 60/123 (48.78%), Query Frame = 3

Query:  327 VAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            V+F G  G+ + ++ LL  +   L++  I+ +++A +   F Q   ++ E   TD I  +Y        +S++   ID  QQ+ +CCG S  GY   S + Y + +    +  G PY   SCC
Sbjct:   94 VSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSY------RDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPY---SCC 207

[Close]

BLAST of Tetraspanin vs. Ensembl Zebrafish
Match: cd151l (CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868])

HSP 1 Score: 53.5286 bits (127), Expect = 8.604e-8
Identity = 35/126 (27.78%), Postives = 61/126 (48.41%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGV-SMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            M+   +G C + +    LL  +  VL++C  +L  +AGV +  + Q   +  + NL +++ + Y  S +      VT A+D++QQ+  CCG++ +       S +  S WI         VP SCC
Sbjct:   72 MITGVLGCCATFKEQRRLLRVYF-VLLLCIFLLEILAGVLAYIYYQQLNDELKENLRETMVQKYNQSEQ----EHVTKAVDKLQQEFKCCGSNSS-------SDWVDSAWIRSSEADGRLVPDSCC 185

[Close]

BLAST of Tetraspanin vs. Ensembl Zebrafish
Match: cd151l (CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868])

HSP 1 Score: 52.373 bits (124), Expect = 2.762e-7
Identity = 35/126 (27.78%), Postives = 61/126 (48.41%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGV-SMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            M+   +G C + +    LL  +  VL++C  +L  +AGV +  + Q   +  + NL +++ + Y  S +      VT A+D++QQ+  CCG++ +       S +  S WI         VP SCC
Sbjct:   72 MITGVLGCCATFKEQRRLLRVYF-VLLLCIFLLEILAGVLAYIYYQQLNDELKENLRETMVQKYNQSEQ----EHVTKAVDKLQQEFKCCGSNSS-------SDWVDSAWIRSSEADGRLVPDSCC 185

[Close]

BLAST of Tetraspanin vs. Ensembl Zebrafish
Match: tspan3b (tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42])

HSP 1 Score: 48.1358 bits (113), Expect = 7.789e-6
Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
             V+ FIG C + + S C L+TF  VL    +++ A   V +     +    EA +  SIQ+ Y    + T     + AID +Q+QL CCG         ++S + ++ W +        VP+SCC
Sbjct:   65 FVIGFIGCCATIRESRCGLVTFSAVL----LLVFATEVVVVVLGYIYRAKVEAVVNHSIQKVYN-EYKGTNTDAPSRAIDYVQRQLHCCGI-------HNYSDWMNTHWFIESKNNS--VPVSCC 175

[Close]

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
             V+ FIG C + + S C L+TF  VL    +++ A   V +     +    EA +  SIQ+ Y    + T     + AID +Q+QL CCG         ++S + ++ W +        VP+SCC
Sbjct:   65 FVIGFIGCCATIRESRCGLVTFSAVL----LLVFATEVVVVVLGYIYRAKVEAVVNHSIQKVYN-EYKGTNTDAPSRAIDYVQRQLHCCGI-------HNYSDWMNTHWFIESKNNS--VPVSCC 175

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: ENSXETT00000022348.1 (tetraspanin-4-like [Source:NCBI gene;Acc:101734690])

HSP 1 Score: 52.373 bits (124), Expect = 7.223e-7
Identity = 29/91 (31.87%), Postives = 45/91 (49.45%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGA 593
            MVV FIG  G+     CLLLTF  +L+I  ++ +    + + + + F NY + +L   +Q         T N  +T A D +Q +  CCG 
Sbjct:  145 MVVGFIGCLGAVTEHRCLLLTFFVILLIIFLLEMISMALFLTYTEQFHNYAQEDLKKGLQL-----YNTTGNLGLTNAWDIVQTEFRCCGV 230

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: ENSXETT00000022335.1 (tetraspanin-4-like [Source:NCBI gene;Acc:101734690])

HSP 1 Score: 51.2174 bits (121), Expect = 9.957e-7
Identity = 29/92 (31.52%), Postives = 45/92 (48.91%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGAS 596
            MVV FIG  G+     CLLLTF  +L+I  ++ +    + + + + F NY + +L   +Q         T N  +T A D +Q +  CCG  
Sbjct:   65 MVVGFIGCLGAVTEHRCLLLTFFVILLIIFLLEMISMALFLTYTEQFHNYAQEDLKKGLQL-----YNTTGNLGLTNAWDIVQTEFRCCGVK 151

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: asmt (acetylserotonin O-methyltransferase [Source:Xenbase;Acc:XB-GENE-942483])

HSP 1 Score: 51.2174 bits (121), Expect = 1.052e-6
Identity = 29/92 (31.52%), Postives = 45/92 (48.91%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGAS 596
            MVV FIG  G+     CLLLTF  +L+I  ++ +    + + + + F NY + +L   +Q         T N  +T A D +Q +  CCG  
Sbjct:   67 MVVGFIGCLGAVTEHRCLLLTFFVILLIIFLLEMISMALFLTYTEQFHNYAQEDLKKGLQL-----YNTTGNLGLTNAWDIVQTEFRCCGVK 153

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: asmt (acetylserotonin O-methyltransferase [Source:Xenbase;Acc:XB-GENE-942483])

HSP 1 Score: 51.2174 bits (121), Expect = 1.126e-6
Identity = 29/92 (31.52%), Postives = 45/92 (48.91%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGAS 596
            MVV FIG  G+     CLLLTF  +L+I  ++ +    + + + + F NY + +L   +Q         T N  +T A D +Q +  CCG  
Sbjct:   86 MVVGFIGCLGAVTEHRCLLLTFFVILLIIFLLEMISMALFLTYTEQFHNYAQEDLKKGLQL-----YNTTGNLGLTNAWDIVQTEFRCCGVK 172

[Close]

BLAST of Tetraspanin vs. Ensembl Xenopus
Match: cd151 (CD151 molecule (Raph blood group) [Source:NCBI gene;Acc:100144686])

HSP 1 Score: 50.8322 bits (120), Expect = 1.615e-6
Identity = 33/125 (26.40%), Postives = 59/125 (47.20%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            M+   +G C + +    LL  +  +L++C  +L  +AG+        +N   A L  S+++T     +     +VT A+D++QQ+  CCG++ +    + W   + S WI         VP SCC
Sbjct:   72 MITGILGCCATFKERKSLLKVYF-ILLLCIFILEVLAGILAYIYYQQLN---AELKQSLKQTMTTKYKQPGEEKVTNAVDKLQQEFKCCGSNNS----EDW---RDSIWINSPEAEKRLVPDSCC 185

[Close]

BLAST of Tetraspanin vs. Ensembl Mouse
Match: Tspan15 (tetraspanin 15 [Source:MGI Symbol;Acc:MGI:1917673])

HSP 1 Score: 50.0618 bits (118), Expect = 2.677e-6
Identity = 36/136 (26.47%), Postives = 63/136 (46.32%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPY--VPLSCCALQSNQVIN 722
             +V+FIG+  S + + CLL +F+ +L IC +M +    V++ F    I++   N+   I+  Y        + +    +D +Q++  CCG  G  Y   S + Y   +       GP    VP +CC   +  V+N
Sbjct:   74 FIVSFIGVLASLRDNLCLLQSFMYILGICLVMELIGGIVALIFRNQTIDFLNDNIRRGIENYYD-------DLDFKNIMDFVQKKFKCCG--GEDYRDWSKNQYHDCS-----APGPLACGVPYTCCIRNTTDVVN 195

[Close]

BLAST of Tetraspanin vs. UniProt/SwissProt
Match: sp|Q11098|TSP17_CAEEL (Tetraspanin-17 OS=Caenorhabditis elegans OX=6239 GN=tsp-17 PE=1 SV=4)

HSP 1 Score: 58.9214 bits (141), Expect = 2.467e-8
Identity = 48/159 (30.19%), Postives = 68/159 (42.77%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSM----AFNQNFINYFEANLT--------------DSIQ---------------RTYGVSTEITRNSEVTTAIDQMQQQLSCCGASG-NGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            ++V F+GLCG+  RS  LLL F+  LI   +  +A+  +S+     F+ N++  +  NLT              D+IQ                 YGV T    N  VT  ID++Q    CCG+ G   Y    WS    ST    +    P  P+SCC
Sbjct:   73 LLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKFSNNYMGVYLKNLTYNRYSRDRWVLPLMDTIQFYVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWS---QSTNQDSEEIESPLFPVSCC 228

[Close]

BLAST of Tetraspanin vs. TrEMBL
Match: V4B2G9 (Tetraspanin OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_157853 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.657e-21
Identity = 68/207 (32.85%), Postives = 102/207 (49.28%), Query Frame = 3

Query:  249 AAVIMYNDLYRAGYXXXXXXXXXXMVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYK--SSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPA--PPIANSSTVNNYLNMQGCYTVLSDALTYYS 857
             A I+  DLY AG  +LI  G L++V++F G CG+ Q +   L  +I +L +   + IA A V   F     +  +  L   I   YGV+ +I  N+  T A D++Q ++ CCG SGN  +  SW+ YK   + W      G PYVP SCC            CQG  ++  PP+  PP+ +   +N  L   GC+  + + L + S
Sbjct:   45 VAAIVGTDLYEAGSYVLIAGGGLIIVISFCGWCGTIQENRTFLCCYIFILSLLLTVFIAAAVVGFIFKDQITDQLQVELETRIIYKYGVNLDIRENNFFTEAWDRLQLKIMCCGVSGNINSTDSWAFYKHYHTRWYEQFQPGSPYVPESCCDPAGED----PKCQGDMEMNGPPSLGPPVNSDMVLNMALYTDGCFDKIKNILKFNS 247

[Close]

BLAST of Tetraspanin vs. TrEMBL
Match: A0A210PUQ4 (Tetraspanin OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT08583 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.152e-20
Identity = 68/221 (30.77%), Postives = 110/221 (49.77%), Query Frame = 3

Query:  213 VWLAVWTSYFNYAAVIMYNDLYRAGYXXXXXXXXXXMVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEI-TRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYK--SSTWILGQNYGP-PYVPLSCCALQSNQVINAAFCQGTTQIGSPP--APPIANSSTVNNYLNMQGCYTVLSDALTYYS 857
            +WL V        +V++ ++L+  G  L++  G ++ ++AF G CG+ +   C+L  +  VL++  + LI    ++  F +N  + F+  L  +I++ YG      T N  VT A D +Q++L CCGA GN  +  SW++YK  S  W    +    P VP SCC       ++   CQG   I  PP   PP   S T N ++   GCY  + D +  +S
Sbjct:  112 IWLLVTDFSAREVSVVIDSNLFEIGTYLILAGGGMIALLAFCGCCGTMREDRCILGFYGVVLVLVFMALIVGGVLAFMFRENMTSDFKEKLVVTIEKQYGFEVRTNTHNRLVTDAWDSIQRKLKCCGAYGNISSDFSWAIYKQHSDWWARRPSRDKYPMVPDSCCVPD----MDKEKCQGRVFIEGPPNKGPPFKGSHTENPHIYTVGCYDKVIDYMMQHS 328

[Close]

BLAST of Tetraspanin vs. TrEMBL
Match: A0A0L8FY26 (Tetraspanin OS=Octopus bimaculoides OX=37653 GN=OCBIM_22004386mg PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.466e-20
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 3

Query:  324 VVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSE-VTTAIDQMQQQLSCCGASGNGYTGKSWSLYK-SSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPA--PPIANSSTVNNYLNMQGCYTVLSDAL 845
            ++AF G CG+ +   C+L  +   L    + L    G++  F +        ++T++I++ YG+ T    N++ VT A D +Q+QL CCG  G   +  SWS+YK  S W        PYVP SCC   SN+      C G  ++ +PPA  PPI  +   N+ LN +GC   + + L
Sbjct:  150 LLAFCGCCGTMREDKCVLGFYSGTLSFMLLFLTVSCGMAFYFRRQVTKDIVKHMTNTIEQQYGLDTRTNSNNKLVTDAWDSLQRQLQCCGIKGGENSSFSWSVYKLRSEWYRRNPEQSPYVPRSCCKKDSNE----KKCTGEIRLRAPPALGPPIGKNDLRNHDLNTEGCLDKIREHL 323

[Close]

BLAST of Tetraspanin vs. TrEMBL
Match: K1QZN2 (Tetraspanin OS=Crassostrea gigas OX=29159 GN=CGI_10023435 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.268e-18
Identity = 66/229 (28.82%), Postives = 108/229 (47.16%), Query Frame = 3

Query:  213 VWLAVWTSYFNYAAVIMYNDLYRAGYXXXXXXXXXXMVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEI-TRNSEVTTAIDQMQQQLSCCG-----ASGNGYTG-KSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQI--GSPPAPPIANSSTVNNYLNMQGCYTVLSDALTYYSRAMFG 872
            +WL V         VI+ +D++  G  +++  G L+ ++AF G CG+ +   C+L  +  VL +  + L+A   ++  F +N     +  L  ++Q  YG      T N  +T A D MQ++  CCG       G    G KSW  +KS+ W + ++   P VP SCC   +++      CQG + I  G P   P        ++L+ +GCY  +   LT YS  + G
Sbjct:  132 IWLLVTDFSAREITVIINSDMFEIGTYMILAGGGLVALLAFCGCCGTMREDRCILGFYGVVLALVFMALLAGGAMAFLFRENISEDIKTKLEYTLQTQYGQDVRGNTTNRLITDAWDSMQRKFECCGPYSLDEDGEDLRGAKSWDFFKSTNWYMSKSQKYPMVPESCCIEGADK----QKCQGQSIIMKGPPNYGPAQLPKKFESHLHTEGCYEKVKKYLTEYSLILGG 356

[Close]

BLAST of Tetraspanin vs. TrEMBL
Match: A0A267FJJ2 (Tetraspanin OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig003051g2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.497e-16
Identity = 52/175 (29.71%), Postives = 93/175 (53.14%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYK-SSTW-----ILGQNYGPPYVPLSCCALQSNQVI-NAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCY 824
            +V +  GL G+ + ++CL L ++ V+I   +  + +  +  AF     +  ++ L  SI + YG++ +  RN+E+TTA D +Q+  SCCGA G   + +SW LY+ +S W     +L  N   P+VPLSCC  +++  + +   C G   + + P       +  N  L ++GC+
Sbjct:   98 LVASIFGLIGTVKNNTCLHLFYLIVVICLFVTFLVVGAIGFAFYTELQDAVKSTLETSIAKYYGINLDADRNTEITTATDAVQRYFSCCGAYGGVNSTRSWYLYQNASAWYQATTVLEGN-KAPFVPLSCCKRRADSSVQDQPRCLGNVNVTNAPPANPPPLTGSNAALFIEGCF 271

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: cd151l (CD151 antigen-like [Source:NCBI gene;Acc:103028881])

HSP 1 Score: 52.373 bits (124), Expect = 2.922e-7
Identity = 35/131 (26.72%), Postives = 61/131 (46.56%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGV-SMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSN 710
            M+   +G C + +    LL  +  VL++C  +L  +AGV +  + Q      + NL +++ + Y    +      +T A+D++QQ+  CCG++ +       S +  S WI         VP SCC  QS 
Sbjct:   72 MITGVLGCCATFKEQRRLLRVYF-VLLLCIFLLEVLAGVLAYIYYQQLNEELKDNLKETMVQKYHQPDQ----DHITKAVDKLQQEFKCCGSNKS-------SDWAESVWIRSNEARGRKVPDSCCKSQSE 190

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: cd151l (CD151 antigen-like [Source:NCBI gene;Acc:103028881])

HSP 1 Score: 51.9878 bits (123), Expect = 3.048e-7
Identity = 35/131 (26.72%), Postives = 61/131 (46.56%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGV-SMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSN 710
            M+   +G C + +    LL  +  VL++C  +L  +AGV +  + Q      + NL +++ + Y    +      +T A+D++QQ+  CCG++ +       S +  S WI         VP SCC  QS 
Sbjct:   72 MITGVLGCCATFKEQRRLLRVYF-VLLLCIFLLEVLAGVLAYIYYQQLNEELKDNLKETMVQKYHQPDQ----DHITKAVDKLQQEFKCCGSNKS-------SDWAESVWIRSNEARGRKVPDSCCKSQSE 190

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: tspan36 (tetraspanin 36 [Source:NCBI gene;Acc:437021])

HSP 1 Score: 51.2174 bits (121), Expect = 5.499e-7
Identity = 58/187 (31.02%), Postives = 77/187 (41.18%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFI------NYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYT----VLSDALTY 851
             ++  IG C +T R S + L+F  V     I+L+  A    AF   FI         E +++D  Q+  G      +N+E T A+D +Q QL CCG   N YT   WS   S  W    N     VP+SCC   S        C G  Q   P              LN+QGC      +L D L+Y
Sbjct:   64 FIIGLIGCC-ATLRESKVGLSFFMV-----ILLLVFAAEVAAFVFGFIYRGKIKGDLEKSMSDVFQKYDG------KNAE-TAAVDYLQSQLQCCGV--NNYT--DWS---SRPWFTSHN---STVPVSCCKANST-------CTG--QFDKP------------ELLNVQGCEAKLEKLLQDVLSY 206

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: tspan36 (tetraspanin 36 [Source:NCBI gene;Acc:437021])

HSP 1 Score: 50.8322 bits (120), Expect = 6.200e-7
Identity = 58/187 (31.02%), Postives = 77/187 (41.18%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFI------NYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYT----VLSDALTY 851
             ++  IG C +T R S + L+F  V     I+L+  A    AF   FI         E +++D  Q+  G      +N+E T A+D +Q QL CCG   N YT   WS   S  W    N     VP+SCC   S        C G  Q   P              LN+QGC      +L D L+Y
Sbjct:   64 FIIGLIGCC-ATLRESKVGLSFFMV-----ILLLVFAAEVAAFVFGFIYRGKIKGDLEKSMSDVFQKYDG------KNAE-TAAVDYLQSQLQCCGV--NNYT--DWS---SRPWFTSHN---STVPVSCCKANST-------CTG--QFDKP------------ELLNVQGCEAKLEKLLQDVLSY 206

[Close]

BLAST of Tetraspanin vs. Ensembl Cavefish
Match: cd63 (CD63 molecule [Source:NCBI gene;Acc:103032697])

HSP 1 Score: 47.3654 bits (111), Expect = 9.307e-6
Identity = 34/125 (27.20%), Postives = 55/125 (44.00%), Query Frame = 3

Query:  327 VAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPY--VPLSCC 695
            +AF G CG+ + + C++  F  +L +  I+ I  A  +  F        +  L D I++    S E          +D++Q+ L CCGA+             SS W+   N+ P +  VP SCC
Sbjct:   67 IAFFGCCGAWKENYCMVTMFAILLSLIIIVEIGTAIAAYVFRDKLTGLVDDGLRDMIKQYNNGSKEYQEG------LDRIQKDLKCCGAA------------NSSDWV---NFKPDHTSVPDSCC 170

[Close]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Match: tspan3a (tetraspanin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7787])

HSP 1 Score: 47.3654 bits (111), Expect = 2.740e-6
Identity = 33/125 (26.40%), Postives = 55/125 (44.00%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
             VV  +G C + + S C L TF  +L++   + +  A +  A+     +  E  ++       G     T ++  + AID +Q QL CCG        K++  +K   W    + G   VP+SCC
Sbjct:   67 FVVGIVGCCATVRESKCGLSTFFILLLMIFSLEVVAALLGYAYRGQVKDKVERTISQVFNEYNG-----TDSNTASRAIDYVQHQLKCCGV-------KNYLDWKDRPWF--NHTGNNSVPISCC 177

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO35283 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLY4])

HSP 1 Score: 51.9878 bits (123), Expect = 1.238e-7
Identity = 38/130 (29.23%), Postives = 65/130 (50.00%), Query Frame = 3

Query:  324 VVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNY-GPPYVPLSCCALQSN 710
            +V+F G  G+ + + C+L TF  +L+I   + IA A ++  +     +  E++LT +++  YG S +      VT A D +Q++  CCG   NGY            W   + Y G   VP SCC ++++
Sbjct:   68 IVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKVKDEIESDLTKALKGDYGSSGQ----DGVTKAFDALQEKQKCCGV--NGYL----------DWKASKKYNGTSTVPDSCCVVKAD 181

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO35938 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SK25])

HSP 1 Score: 50.8322 bits (120), Expect = 2.866e-7
Identity = 37/136 (27.21%), Postives = 61/136 (44.85%), Query Frame = 3

Query:  327 VAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEA------NLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNG-YTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQ 713
            V F G CG+ + S C+L T++  L+   + L     +   + + F+ + +       NL + I+ TYG       +SEV + I+ +Q +L CCG    G + G  W    +             VPLSCC   +N+
Sbjct:   65 VGFFGCCGAVKESRCMLATWLKYLLTILLSLSKQVNLFELYLKFFLLWHQVQEEIKINLDEQIRNTYG------YDSEVESHINNLQIRLKCCGGERPGDWLGSKWKRDLNK---------DKIVPLSCCTENANK 185

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO39846 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S900])

HSP 1 Score: 49.2914 bits (116), Expect = 3.875e-7
Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 3

Query:  324 VVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYG-PPYVPLSCC 695
            +VAF+G CG+ + S C+L+ F   ++I   + IA A ++        +  E  L + I+   G +    RN     A+D MQ+ + CCG +       ++  +KSS      N G    VP SCC
Sbjct:   61 IVAFLGCCGAWKESKCMLICFFVCMLILFCLEIAAAVLAFVKKDKVKDELENELKNQIKSYTGSA----RN-----AVDDMQKTVKCCGIT-------TYEDWKSS-----DNLGLTDNVPDSCC 164

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO47592 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLE8])

HSP 1 Score: 47.7506 bits (112), Expect = 3.177e-6
Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 3

Query:  324 VVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            +V+F G CG+ +   CLL TF  +L I  I+ + I G ++ +     N  E  L   +  T  VS        +T A D +Q++  CCG   NG+  K W   + S +  G +     VP SCC
Sbjct:   66 LVSFFGCCGAIKEHRCLLATFFALLFI--ILAVEITGTALGYVYR--NKVEEQLGKDMNDTI-VSYGEKGKEGITDAYDAIQKKEKCCGI--NGF--KDW---QRSYYTKGNH---SIVPDSCC 174

[Close]

BLAST of Tetraspanin vs. Ensembl Nematostella
Match: EDO46887 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNN8])

HSP 1 Score: 46.9802 bits (110), Expect = 4.812e-6
Identity = 38/145 (26.21%), Postives = 60/145 (41.38%), Query Frame = 3

Query:  330 AFIGLCGSTQRSSCLLLTF---ITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCG-ASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQI 752
            AF+  CG+ + S C+L T+   +T +   E+  I +A V       +    E NL   I+ T      ++ +  VT AID++ +   CCG A    +    W+              P  VP SCC   S+   N    +  T+I
Sbjct:   61 AFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYV-------YRERIEKNLHGDIRSTMN-EYHLSGHDAVTRAIDEIHRDFKCCGNAQYRDWFETKWA-----------KTHPDMVPRSCCKDPSDSKCNENISKDPTKI 186

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: ENSORLT00000001610.2 (CD151 molecule (Raph blood group) [Source:NCBI gene;Acc:101161865])

HSP 1 Score: 53.5286 bits (127), Expect = 9.302e-8
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGV-SMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
            MV   +G C + +    LL  +  VL++C  +L  +AGV +  + Q      + NL +++ R Y    E+     +T A+D++QQ+  CCG++ +       S +K ++W++        VP SCC
Sbjct:   72 MVTGVLGCCATFKEQRRLLRVYF-VLLLCIFLLEVLAGVLAYIYYQQLNEELKLNLKETLIRKY----EVGSYEHITRAVDKLQQEFKCCGSNSS-------SDWKENSWVMDTG---RKVPDSCC 182

[Close]

BLAST of Tetraspanin vs. Ensembl Medaka
Match: tspan34 (tetraspanin-1 [Source:NCBI gene;Acc:101174246])

HSP 1 Score: 48.9062 bits (115), Expect = 3.263e-6
Identity = 25/90 (27.78%), Postives = 49/90 (54.44%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCG 590
            +++ F+G CG+ + S C+LLTF  ++++  I+ +A A V  AF+    +    N+ + ++    + TE  R+  +T+      +Q  CCG
Sbjct:   70 VIIGFLGCCGAVKESRCMLLTFFCIVLVIFIVEVAGAIVLFAFD-GLADKILDNVENEVRSK--LQTEFGRDESLTSVWGSTMEQFKCCG 156

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000055436.1 (SMESG000055436.1)

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 343/346 (99.13%), Postives = 346/346 (100.00%), Query Frame = 3

Query:   84 MYGQRSTNNQVVIEDQQSYAIGTTNTXXXXXXXXXXXXXXXXXVWLAVWTSYFNYAAVIMYNDLYRAGYXXXXXXXXXXMVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYTVLSDALTYYSRAMFGXXXXXXXXXXXXXXXXCVLVRDIEVKKKELNDLQSGNLEKDMKHKVQPTKDLHSIPKQRNTNEYQQNESPIKNSYKDSQRILK 1121
            MYGQRSTNNQVVIEDQQSYAIGTTNTILSFFLFLIAIGIFGFGVWLAVWTSYFNYAAVIMYNDLYRAGYILLIISGSLLMVVAFIGLCGSTQRSSCLLLTFITVLIICEIML+AIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILG+NYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYTVLSDALTYYSRAMFGLSLASAIYLLIILILSCVLVRDIE+KKKELNDLQSGNLEKDMKHKVQPTKDLHSIPKQRNTNEYQQNESPIKNSYKDSQRILK
Sbjct:    1 MYGQRSTNNQVVIEDQQSYAIGTTNTILSFFLFLIAIGIFGFGVWLAVWTSYFNYAAVIMYNDLYRAGYILLIISGSLLMVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLMAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGKNYGPPYVPLSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYTVLSDALTYYSRAMFGLSLASAIYLLIILILSCVLVRDIEIKKKELNDLQSGNLEKDMKHKVQPTKDLHSIPKQRNTNEYQQNESPIKNSYKDSQRILK 346

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000073695.1 (SMESG000073695.1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.118e-9
Identity = 40/137 (29.20%), Postives = 63/137 (45.99%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCCALQSNQVINAAF 731
             VV F G CG+ + S  LL T+I +L++  I+ I+    +    +  +   E +L  SI + Y      T N  +  AID +Q+   CCG      T K+W   ++STW + +N      P SCC       + + F
Sbjct:   70 FVVGFCGCCGAIRESRLLLGTYIVLLLLIMIVEISCGIYATVKEKEVVRKIEKSLEKSIIKNYPPFNS-TSNQNLKNAIDYIQKTFRCCGVK----TYKNW---ENSTWYISRNDSFMETPSSCCESDIESELRSCF 198

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000021627.1 (SMESG000021627.1)

HSP 1 Score: 50.0618 bits (118), Expect = 9.638e-7
Identity = 35/125 (28.00%), Postives = 56/125 (44.80%), Query Frame = 3

Query:  321 MVVAFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVPLSCC 695
             V+AF G CG+ + S  LL  +I  L++   + +A+   ++ + Q         L  +I   YG   +   N ++T   D +QQ LSCCG  G     + W   + S W + +       P SCC
Sbjct:   67 FVIAFCGCCGAVRESKLLLGMYIVFLMLIIFIQVALGIFAIFYKQKIEKSVSKTLKTAITELYGYDKD---NDKIT---DNIQQILSCCGIEGP----QDW---EKSKWYIEKMNKSQMFPKSCC 178

[Close]

BLAST of Tetraspanin vs. Planmine SMEST
Match: SMESG000043582.1 (SMESG000043582.1)

HSP 1 Score: 49.2914 bits (116), Expect = 1.960e-6
Identity = 43/175 (24.57%), Postives = 69/175 (39.43%), Query Frame = 3

Query:  330 AFIGLCGSTQRSSCLLLTFITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITRNSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPP--YVPLSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYTVLSDALT 848
            A  G CG  + S C ++ FI V +I   +L     +   +N    +   ++L       YG+    TR        ++ Q +  CCG   NG   KS   Y S +     N  P    VPLSCC ++    +N   C       S P          + Y+  +GC+ +L + ++
Sbjct:   63 AIFGFCGILRESRCCMILFILVTVIAFTILTVSGALLFVYNNQVKSTVISHLKKEFINKYGIDASYTR------LWNEFQPKHMCCGID-NGADYKSTKWYNSPS-----NEFPKEGEVPLSCCTMKDEHFLNTTACA-----HSRPEDQ-------SKYIYNKGCWDILRNVVS 213

The following BLAST results are available for this feature:

BLAST of Tetraspanin vs. Ensembl Human
BLAST of Tetraspanin vs. Ensembl Celegans
BLAST of Tetraspanin vs. Ensembl Fly
BLAST of Tetraspanin vs. Ensembl Zebrafish
BLAST of Tetraspanin vs. Ensembl Xenopus
BLAST of Tetraspanin vs. Ensembl Mouse
BLAST of Tetraspanin vs. UniProt/SwissProt
BLAST of Tetraspanin vs. TrEMBL
BLAST of Tetraspanin vs. Ensembl Cavefish
BLAST of Tetraspanin vs. Ensembl Sea Lamprey
BLAST of Tetraspanin vs. Ensembl Yeast
BLAST of Tetraspanin vs. Ensembl Nematostella
BLAST of Tetraspanin vs. Ensembl Medaka
BLAST of Tetraspanin vs. Planmine SMEST

BLAST of Tetraspanin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4


Match Name	E-value	Identity	Description
CD151	7.969e-7	27.27	CD151 molecule (Raph blood group) [Source:HGNC Sym...	[more]
CD53	6.096e-6	33.33	CD53 molecule [Source:HGNC Symbol;Acc:HGNC:1686]	[more]
CD53	6.096e-6	33.33	CD53 molecule [Source:HGNC Symbol;Acc:HGNC:1686]	[more]
CD151	7.482e-6	31.03	CD151 molecule (Raph blood group) [Source:HGNC Sym...	[more]

BLAST of Tetraspanin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3


Match Name	E-value	Identity	Description
tsp-17	5.429e-12	33.33	Tetraspanin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q...	[more]
tsp-17	1.939e-9	30.19	Tetraspanin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q...	[more]
tsp-17	2.618e-7	27.81	Tetraspanin-17 [Source:UniProtKB/Swiss-Prot;Acc:Q...	[more]

BLAST of Tetraspanin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Tsp96F	3.169e-9	37.23	gene:FBgn0027865 transcript:FBtr0330163	[more]
Tsp96F	3.622e-9	37.23	gene:FBgn0027865 transcript:FBtr0330164	[more]
Tsp96F	3.622e-9	37.23	gene:FBgn0027865 transcript:FBtr0084912	[more]
Tsp86D	2.796e-6	28.46	gene:FBgn0037848 transcript:FBtr0330150	[more]
Tsp86D	5.326e-6	28.46	gene:FBgn0037848 transcript:FBtr0306640	[more]

BLAST of Tetraspanin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 4


Match Name	E-value	Identity	Description
cd151l	8.604e-8	27.78	CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-0404...	[more]
cd151l	2.762e-7	27.78	CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-0404...	[more]
tspan3b	7.789e-6	29.60	tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42...	[more]
tspan3b	7.789e-6	29.60	tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42...	[more]

BLAST of Tetraspanin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSXETT00000022348.1	7.223e-7	31.87	tetraspanin-4-like [Source:NCBI gene;Acc:101734690...	[more]
ENSXETT00000022335.1	9.957e-7	31.52	tetraspanin-4-like [Source:NCBI gene;Acc:101734690...	[more]
asmt	1.052e-6	31.52	acetylserotonin O-methyltransferase [Source:Xenbas...	[more]
asmt	1.126e-6	31.52	acetylserotonin O-methyltransferase [Source:Xenbas...	[more]
cd151	1.615e-6	26.40	CD151 molecule (Raph blood group) [Source:NCBI gen...	[more]

BLAST of Tetraspanin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1


Match Name	E-value	Identity	Description
Tspan15	2.677e-6	26.47	tetraspanin 15 [Source:MGI Symbol;Acc:MGI:1917673]	[more]

BLAST of Tetraspanin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 1


Match Name	E-value	Identity	Description
sp\|Q11098\|TSP17_CAEEL	2.467e-8	30.19	Tetraspanin-17 OS=Caenorhabditis elegans OX=6239 G...	[more]

BLAST of Tetraspanin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
V4B2G9	1.657e-21	32.85	Tetraspanin OS=Lottia gigantea OX=225164 GN=LOTGID...	[more]
A0A210PUQ4	1.152e-20	30.77	Tetraspanin OS=Mizuhopecten yessoensis OX=6573 GN=...	[more]
A0A0L8FY26	4.466e-20	32.58	Tetraspanin OS=Octopus bimaculoides OX=37653 GN=OC...	[more]
K1QZN2	5.268e-18	28.82	Tetraspanin OS=Crassostrea gigas OX=29159 GN=CGI_1...	[more]
A0A267FJJ2	4.497e-16	29.71	Tetraspanin OS=Macrostomum lignano OX=282301 GN=BO...	[more]

BLAST of Tetraspanin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cd151l	2.922e-7	26.72	CD151 antigen-like [Source:NCBI gene;Acc:103028881...	[more]
cd151l	3.048e-7	26.72	CD151 antigen-like [Source:NCBI gene;Acc:103028881...	[more]
tspan36	5.499e-7	31.02	tetraspanin 36 [Source:NCBI gene;Acc:437021]	[more]
tspan36	6.200e-7	31.02	tetraspanin 36 [Source:NCBI gene;Acc:437021]	[more]
cd63	9.307e-6	27.20	CD63 molecule [Source:NCBI gene;Acc:103032697]	[more]

BLAST of Tetraspanin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
tspan3a	2.740e-6	26.40	tetraspanin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-77...	[more]

BLAST of Tetraspanin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Tetraspanin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO35283	1.238e-7	29.23	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO35938	2.866e-7	27.21	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO39846	3.875e-7	29.60	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47592	3.177e-6	31.45	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO46887	4.812e-6	26.21	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Tetraspanin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSORLT00000001610.2	9.302e-8	27.78	CD151 molecule (Raph blood group) [Source:NCBI gen...	[more]
tspan34	3.263e-6	27.78	tetraspanin-1 [Source:NCBI gene;Acc:101174246]	[more]

BLAST of Tetraspanin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4


Match Name	E-value	Identity	Description
SMESG000055436.1	0.000e+0	99.13	SMESG000055436.1	[more]
SMESG000073695.1	3.118e-9	29.20	SMESG000073695.1	[more]
SMESG000021627.1	9.638e-7	28.00	SMESG000021627.1	[more]
SMESG000043582.1	1.960e-6	24.57	SMESG000043582.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30010631 ID=SMED30010631|Name=Tetraspanin|organism=Schmidtea mediterranea sexual|type=transcript|length=1292bp
GAAACACTTTCAAATTTGAGTAAATTAAATTTAGATAATAAAATTTAATC
CAAATATTAATGAAATAAAAATTGGAAATAAGGATGTATGGACAAAGATC
TACTAATAATCAAGTAGTTATTGAGGATCAACAATCATATGCCATTGGCA
CAACCAACACAATCTTATCTTTTTTTTTATTTTTAATAGCAATTGGGATA
TTTGGGTTTGGAGTGTGGCTGGCAGTATGGACGAGTTATTTCAATTACGC
TGCTGTGATTATGTATAATGATCTGTACCGAGCTGGATATATCTTATTAA
TTATATCCGGCTCCTTACTGATGGTTGTCGCATTCATTGGACTGTGTGGT
AGCACTCAAAGGAGTTCCTGTTTATTGTTAACTTTTATAACCGTACTAAT
TATTTGTGAAATCATGCTCATAGCAATCGCCGGTGTCAGCATGGCTTTCA
ATCAGAACTTTATAAATTACTTCGAGGCAAATCTCACTGACTCAATTCAA
AGAACCTACGGAGTTAGTACAGAAATTACTAGAAATTCAGAAGTAACAAC
GGCCATTGATCAAATGCAACAACAGTTATCATGCTGTGGGGCAAGTGGAA
ATGGATACACTGGTAAGTCTTGGAGTTTATACAAATCATCGACTTGGATT
CTTGGGCAAAACTATGGACCACCCTATGTACCGCTAAGTTGCTGTGCATT
ACAATCAAACCAAGTAATAAATGCTGCATTTTGTCAAGGAACAACCCAAA
TCGGAAGCCCACCAGCTCCACCGATTGCAAACAGTTCTACTGTAAACAAC
TATCTTAATATGCAAGGCTGCTACACCGTTCTGTCTGATGCGCTTACTTA
TTACTCCAGAGCAATGTTCGGATTGTCTTTGGCCTCCGCTATTTATTTGT
TGATTATACTGATTCTTTCCTGCGTTCTCGTGAGAGATATAGAGGTTAAG
AAAAAAGAATTAAACGACTTACAGTCTGGAAATCTAGAGAAAGACATGAA
ACATAAAGTCCAACCCACAAAGGATTTGCATTCCATTCCAAAACAACGTA
ATACAAATGAATACCAGCAAAACGAGTCACCCATTAAAAACTCATATAAA
GATTCTCAAAGAATTTTGAAATAATTTTGAATTTCTTTTATTTATTAAAA
CAAATAAAACAGAGAAAAAACCCGAATTCCGCTACCGACGGCTTCGTCAG
TGCTATTAAAATTAATTTATGACTTAAATGTTTTCGTTTTCTTGATTAAT
GTTTTGTAAATTTTCACTATTTTCCTTTTTTCGAGAGATCGG

protein sequence of SMED30010631-orf-1

>SMED30010631-orf-1 ID=SMED30010631-orf-1|Name=SMED30010631-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=347bp
MYGQRSTNNQVVIEDQQSYAIGTTNTILSFFLFLIAIGIFGFGVWLAVWT
SYFNYAAVIMYNDLYRAGYILLIISGSLLMVVAFIGLCGSTQRSSCLLLT
FITVLIICEIMLIAIAGVSMAFNQNFINYFEANLTDSIQRTYGVSTEITR
NSEVTTAIDQMQQQLSCCGASGNGYTGKSWSLYKSSTWILGQNYGPPYVP
LSCCALQSNQVINAAFCQGTTQIGSPPAPPIANSSTVNNYLNMQGCYTVL
SDALTYYSRAMFGLSLASAIYLLIILILSCVLVRDIEVKKKELNDLQSGN
LEKDMKHKVQPTKDLHSIPKQRNTNEYQQNESPIKNSYKDSQRILK*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000034	epidermis
PLANA:0000096	ventral epidermis
PLANA:0000418	head

Vocabulary: **INTERPRO**
Term	Definition
IPR000301	Tetraspanin
IPR018499	Tetraspanin/Peripherin
IPR018503	Tetraspanin_CS
IPR008952	Tetraspanin_EC2_sf

Vocabulary: **cellular component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000301	Tetraspanin	PRINTS	PR00259	TMFOUR	coord: 65..91 score: 30.73 coord: 260..286 score: 21.99 coord: 92..120 score: 22.89 coord: 23..46 score: 22.61
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 26..284 e-value: 3.6E-31 score: 108.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..346
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 29..283
None	No IPR available	PANTHER	PTHR19282:SF283	TETRASPANIN-21	coord: 29..283
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 27..49
None	No IPR available	TMHMM	TMhelix		coord: 98..120
None	No IPR available	TMHMM	TMhelix		coord: 261..283
IPR018503	Tetraspanin, conserved site	PROSITE	PS00421	TM4_1	coord: 76..98
IPR008952	Tetraspanin, EC2 domain superfamily	SUPERFAMILY	SSF48652	Tetraspanin	coord: 134..254

Main menu

Tetraspanin

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

blazegraph-runner