Neurogenic differentiation factor
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010251 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11
Homology
BLAST of Neurogenic differentiation factor vs. Ensembl Human
Match: NEUROD1 (neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7762]) HSP 1 Score: 108.997 bits (271), Expect = 4.570e-27 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 114 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 193
BLAST of Neurogenic differentiation factor vs. Ensembl Human
Match: NEUROD6 (neuronal differentiation 6 [Source:HGNC Symbol;Acc:HGNC:13804]) HSP 1 Score: 104.375 bits (259), Expect = 1.947e-25 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+R G PD LT+ + L +GLSQ T NLVA L +N R Sbjct: 107 MHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGCLQLNAR 186
BLAST of Neurogenic differentiation factor vs. Ensembl Human
Match: NEUROD2 (neuronal differentiation 2 [Source:HGNC Symbol;Acc:HGNC:7763]) HSP 1 Score: 103.219 bits (256), Expect = 1.056e-24 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MH LN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD ++Y +TL +GLSQ T NLVA L +N R Sbjct: 134 MHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSR 213
BLAST of Neurogenic differentiation factor vs. Ensembl Human
Match: NEUROD4 (neuronal differentiation 4 [Source:HGNC Symbol;Acc:HGNC:13802]) HSP 1 Score: 93.9745 bits (232), Expect = 9.992e-22 Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR +P ++ TQKLSKIETLRLA NYIWALS+++ +G P+ + + L +GLSQ T+NLVA L + P+ Sbjct: 100 MHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKGFVEMLCKGLSQPTSNLVAGCLQLGPQ 179
BLAST of Neurogenic differentiation factor vs. Ensembl Human
Match: NEUROG3 (neurogenin 3 [Source:HGNC Symbol;Acc:HGNC:13806]) HSP 1 Score: 57.7658 bits (138), Expect = 2.097e-9 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVR 408 MH LN AL++LR +P F KL+KIETLR A NYIWAL++ +R Sbjct: 96 MHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLR 140
BLAST of Neurogenic differentiation factor vs. Ensembl Celegans
Match: cnd-1 (Neurogenic differentiation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P46581]) HSP 1 Score: 90.1225 bits (222), Expect = 9.521e-22 Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLL 519 MHGLN+AL+ LR ++P+ QKLSKIETLRLA NYI AL +++++ P L YA TL GLSQTT N++A+ L + PR L Sbjct: 32 MHGLNNALDMLREYIPITTQHQKLSKIETLRLARNYIDALQRMLQTNEQPTPLEYAHTLANGLSQTTTNMLANLLQVQPRQL 113
BLAST of Neurogenic differentiation factor vs. Ensembl Fly
Match: tap (gene:FBgn0015550 transcript:FBtr0075216) HSP 1 Score: 53.9138 bits (128), Expect = 5.599e-8 Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSG 414 MH LN ALE LR+ +P KL+KIE LR A NYI+AL +++ SG Sbjct: 167 MHNLNDALEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLESG 213
BLAST of Neurogenic differentiation factor vs. Ensembl Fly
Match: cato (gene:FBgn0024249 transcript:FBtr0087183) HSP 1 Score: 47.7506 bits (112), Expect = 2.021e-6 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSG 414 M+GLN A E LR VP + QKLSK ETL++A +YI AL ++ +G Sbjct: 116 MNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
BLAST of Neurogenic differentiation factor vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0344011) HSP 1 Score: 48.521 bits (114), Expect = 2.261e-6 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 283 LNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEG 459 +N A + LR+HVP F + ++LSKI+TLRLA YI L +++++ D LTY + G Sbjct: 173 INSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDY--DPLTYVEKCLRG 229
BLAST of Neurogenic differentiation factor vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0301709) HSP 1 Score: 48.521 bits (114), Expect = 2.384e-6 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 283 LNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEG 459 +N A + LR+HVP F + ++LSKI+TLRLA YI L +++++ D LTY + G Sbjct: 164 INSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDY--DPLTYVEKCLRG 220
BLAST of Neurogenic differentiation factor vs. Ensembl Fly
Match: Fer2 (gene:FBgn0038402 transcript:FBtr0344010) HSP 1 Score: 48.521 bits (114), Expect = 2.459e-6 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 283 LNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEG 459 +N A + LR+HVP F + ++LSKI+TLRLA YI L +++++ D LTY + G Sbjct: 169 INSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDY--DPLTYVEKCLRG 225
BLAST of Neurogenic differentiation factor vs. Ensembl Zebrafish
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:30169]) HSP 1 Score: 111.309 bits (277), Expect = 4.514e-28 Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN ALESLR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ + L +GLSQ T NLVA L +NPR Sbjct: 109 MHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLMSFVQALCKGLSQPTTNLVAGCLQLNPR 188
BLAST of Neurogenic differentiation factor vs. Ensembl Zebrafish
Match: neurod6a (neuronal differentiation 6a [Source:NCBI gene;Acc:114414]) HSP 1 Score: 107.071 bits (266), Expect = 1.234e-26 Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN+AL+SLR VP ++ TQKLSKIETLRLA NYIWALS+I+ +G PD LT+ +TL +GLSQ T NLVA L +N R Sbjct: 101 MHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILSTGKRPDLLTFVQTLCKGLSQPTTNLVAGCLQLNAR 180
BLAST of Neurogenic differentiation factor vs. Ensembl Zebrafish
Match: neurod6a (neuronal differentiation 6a [Source:NCBI gene;Acc:114414]) HSP 1 Score: 107.071 bits (266), Expect = 1.234e-26 Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN+AL+SLR VP ++ TQKLSKIETLRLA NYIWALS+I+ +G PD LT+ +TL +GLSQ T NLVA L +N R Sbjct: 101 MHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILSTGKRPDLLTFVQTLCKGLSQPTTNLVAGCLQLNAR 180
BLAST of Neurogenic differentiation factor vs. Ensembl Zebrafish
Match: neurod2 (neuronal differentiation 2 [Source:NCBI gene;Acc:114435]) HSP 1 Score: 104.76 bits (260), Expect = 1.278e-25 Identity = 58/121 (47.93%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLLXXXXXXXXXXXEKLYDCQELDPTDQQYPVNTIIKYPFYC 636 MH LN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+R+G PD ++Y +TL +GLSQ T NLVA L +N R CQE P +I YP+ C Sbjct: 120 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRNGKRPDVVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQ------------CQEGVRFHTPTPSFSIQSYPYQC 228
BLAST of Neurogenic differentiation factor vs. Ensembl Zebrafish
Match: neurod6b (neuronal differentiation 6b [Source:NCBI gene;Acc:114415]) HSP 1 Score: 103.99 bits (258), Expect = 1.393e-25 Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN ALESLR VP ++ TQKLSKIETLRLA NYIWALS+ + +G PD L + +TL +GLSQ T NLVA L +N R Sbjct: 91 MHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALSETLSAGKRPDLLAFVQTLCKGLSQPTTNLVAGCLQLNAR 170
BLAST of Neurogenic differentiation factor vs. Ensembl Xenopus
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:100038290]) HSP 1 Score: 108.612 bits (270), Expect = 6.368e-27 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 121 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 200
BLAST of Neurogenic differentiation factor vs. Ensembl Xenopus
Match: neurod6 (neuronal differentiation 6 [Source:NCBI gene;Acc:779726]) HSP 1 Score: 105.145 bits (261), Expect = 1.081e-25 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+R G PD LT+ ++L +GLSQ T NLVA L +N R Sbjct: 107 MHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQSLCKGLSQPTTNLVAGCLQLNAR 186
BLAST of Neurogenic differentiation factor vs. Ensembl Xenopus
Match: neurod2 (neuronal differentiation 2 [Source:NCBI gene;Acc:779941]) HSP 1 Score: 103.219 bits (256), Expect = 5.598e-25 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MH LN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD + Y +TL +GLSQ T NLVA L +N R Sbjct: 117 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVAYVQTLCKGLSQPTTNLVAGCLQLNSR 196
BLAST of Neurogenic differentiation factor vs. Ensembl Xenopus
Match: neurod4 (neuronal differentiation 4 [Source:NCBI gene;Acc:100124310]) HSP 1 Score: 90.1225 bits (222), Expect = 2.345e-20 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLL 519 MHGLN ALE+LR +P ++ TQKLSKIETLRLA NYIWALS I+ G + + + L +GLSQ T+NLVA + + P+ + Sbjct: 92 MHGLNDALENLRRVMPCYSKTQKLSKIETLRLARNYIWALSDILEQGQSTEGKGFLEMLCKGLSQPTSNLVAGCMQLGPQAM 173
BLAST of Neurogenic differentiation factor vs. Ensembl Xenopus
Match: neurog1 (neurogenin 1 [Source:NCBI gene;Acc:100144651]) HSP 1 Score: 58.5362 bits (140), Expect = 1.367e-9 Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVR 408 MH LN AL+ LR +P F KL+KIETLRLA NYIWALS+ +R Sbjct: 88 MHNLNSALDELRGILPSFPDDTKLTKIETLRLAHNYIWALSETLR 132
BLAST of Neurogenic differentiation factor vs. Ensembl Mouse
Match: Neurod1 (neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]) HSP 1 Score: 109.383 bits (272), Expect = 2.788e-27 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 114 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 193
BLAST of Neurogenic differentiation factor vs. Ensembl Mouse
Match: Neurod6 (neurogenic differentiation 6 [Source:MGI Symbol;Acc:MGI:106593]) HSP 1 Score: 104.375 bits (259), Expect = 1.364e-25 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+R G PD LT+ + L +GLSQ T NLVA L +N R Sbjct: 107 MHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGCLQLNAR 186
BLAST of Neurogenic differentiation factor vs. Ensembl Mouse
Match: Neurod2 (neurogenic differentiation 2 [Source:MGI Symbol;Acc:MGI:107755]) HSP 1 Score: 103.219 bits (256), Expect = 7.556e-25 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MH LN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD ++Y +TL +GLSQ T NLVA L +N R Sbjct: 135 MHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSR 214
BLAST of Neurogenic differentiation factor vs. Ensembl Mouse
Match: Neurod4 (neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]) HSP 1 Score: 89.7373 bits (221), Expect = 2.658e-20 Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR +P ++ TQKLSKIETLRLA NYIWALS+++ +G + + + L +GLSQ T+NLVA L + P+ Sbjct: 100 MHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTLEGKGFVEMLCKGLSQPTSNLVAGCLQLGPQ 179
BLAST of Neurogenic differentiation factor vs. Ensembl Mouse
Match: Neurog3 (neurogenin 3 [Source:MGI Symbol;Acc:MGI:893591]) HSP 1 Score: 55.4546 bits (132), Expect = 3.902e-10 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVR 408 MH LN AL++LR +P F KL+KIETLR A NYIWAL++ +R Sbjct: 1 MHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLR 45
BLAST of Neurogenic differentiation factor vs. UniProt/SwissProt
Match: sp|O42202|NDF1_DANRE (Neurogenic differentiation factor 1 OS=Danio rerio OX=7955 GN=neurod1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.408e-27 Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN ALESLR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ + L +GLSQ T NLVA L +NPR Sbjct: 109 MHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLMSFVQALCKGLSQPTTNLVAGCLQLNPR 188
BLAST of Neurogenic differentiation factor vs. UniProt/SwissProt
Match: sp|Q91616|NDF1_XENLA (Neurogenic differentiation factor 1 OS=Xenopus laevis OX=8355 GN=neurod1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.241e-27 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL+SLR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 115 MHGLNDALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 194
BLAST of Neurogenic differentiation factor vs. UniProt/SwissProt
Match: sp|Q60430|NDF1_MESAU (Neurogenic differentiation factor 1 OS=Mesocricetus auratus OX=10036 GN=NEUROD1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.836e-26 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 113 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 192
BLAST of Neurogenic differentiation factor vs. UniProt/SwissProt
Match: sp|Q60867|NDF1_MOUSE (Neurogenic differentiation factor 1 OS=Mus musculus OX=10090 GN=Neurod1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.950e-26 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 114 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 193
BLAST of Neurogenic differentiation factor vs. UniProt/SwissProt
Match: sp|Q64289|NDF1_RAT (Neurogenic differentiation factor 1 OS=Rattus norvegicus OX=10116 GN=Neurod1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.182e-26 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ +TL +GLSQ T NLVA L +NPR Sbjct: 114 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPR 193
BLAST of Neurogenic differentiation factor vs. TrEMBL
Match: A0A0A7M6A3 (Neurogenic differentiation factor (Fragment) OS=Schmidtea polychroa OX=50054 GN=neuroD PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.270e-61 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 1 Query: 139 LMMTTSSVDXXXXXXXXXXXXXMTXXXXXXXXXXXXXXXXXXXXXMHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLLXXXXXXXXXXXEKLYDCQELDP 585 LMMTTSSVDIKIPKKRGPKKKPMTEERRERLVQRRARANSRERNRMHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLH+NPRLLSKSS NFTNSS+KLYDCQELDP Sbjct: 1 LMMTTSSVDIKIPKKRGPKKKPMTEERRERLVQRRARANSRERNRMHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHVNPRLLSKSSGNFTNSSDKLYDCQELDP 149
BLAST of Neurogenic differentiation factor vs. TrEMBL
Match: R7TSH4 (BHLH domain-containing protein (Fragment) OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_111699 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 9.906e-29 Identity = 55/82 (67.07%), Postives = 68/82 (82.93%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLL 519 MHGLN ALE LR +VP ++ TQKLSKIETLRLA NYI +L+ I+++G+ PDT+T+AKTLT+GLSQ T NLVA SL +NPR L Sbjct: 24 MHGLNEALEVLREYVPCYSKTQKLSKIETLRLARNYISSLAGILKNGVKPDTITFAKTLTDGLSQNTMNLVAGSLQLNPRTL 105
BLAST of Neurogenic differentiation factor vs. TrEMBL
Match: V4AVY5 (BHLH domain-containing protein (Fragment) OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_59712 PE=4 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.238e-28 Identity = 50/82 (60.98%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLL 519 MHGLNHAL+ LR HVP ++ TQKLSKIETLRLA NYI++L+ I+++G+ PD++++AK+L++GLSQ T N+VA L +NPR L Sbjct: 27 MHGLNHALDDLRRHVPCYSKTQKLSKIETLRLARNYIFSLADILKNGVRPDSVSFAKSLSKGLSQNTMNMVAGCLQLNPRTL 108
BLAST of Neurogenic differentiation factor vs. TrEMBL
Match: A0A223GC67 (NeuroD (Fragment) OS=Capitella teleta OX=283909 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.604e-27 Identity = 55/82 (67.07%), Postives = 68/82 (82.93%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLL 519 MHGLN ALE LR +VP ++ TQKLSKIETLRLA NYI +L+ I+++G+ PDT+T+AKTLT+GLSQ T NLVA SL +NPR L Sbjct: 113 MHGLNEALEVLREYVPCYSKTQKLSKIETLRLARNYISSLAGILKNGVKPDTITFAKTLTDGLSQNTMNLVAGSLQLNPRTL 194
BLAST of Neurogenic differentiation factor vs. TrEMBL
Match: A0A210Q1G1 (Neurogenic differentiation factor 6-A OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT19140 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.658e-27 Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLL 519 MHGLN AL+ LR HVP ++ TQKLSKIETLRLA NYI+AL++I++SG+ PD++++AK L++GLSQ T NLVA LH+NPR L Sbjct: 116 MHGLNDALDELREHVPCYSKTQKLSKIETLRLARNYIFALAEILKSGMKPDSVSFAKALSKGLSQNTMNLVAGGLHLNPRTL 197
BLAST of Neurogenic differentiation factor vs. Ensembl Cavefish
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:30169]) HSP 1 Score: 108.997 bits (271), Expect = 3.181e-27 Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN ALE LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD +++ + L +GLSQ T NLVA L +NPR Sbjct: 109 MHGLNDALEGLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLMSFVQALCKGLSQPTTNLVAGCLQLNPR 188
BLAST of Neurogenic differentiation factor vs. Ensembl Cavefish
Match: neurod6a (neuronal differentiation 6a [Source:NCBI gene;Acc:114414]) HSP 1 Score: 105.145 bits (261), Expect = 6.689e-26 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN+AL+SLR VP ++ TQKLSKIETLRLA NYIWALS+I+ +G PD L++ TL +GLSQ T NLVA L +N R Sbjct: 113 MHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILSTGKRPDLLSFVHTLCKGLSQPTTNLVAGCLQLNAR 192
BLAST of Neurogenic differentiation factor vs. Ensembl Cavefish
Match: neurod2 (neuronal differentiation 2 [Source:NCBI gene;Acc:114435]) HSP 1 Score: 101.679 bits (252), Expect = 1.227e-24 Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MH LN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+R+G PD ++Y +TL +GLSQ T NLVA L ++ R Sbjct: 124 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRNGKRPDVVSYVQTLCKGLSQPTTNLVAGCLQLSAR 203
BLAST of Neurogenic differentiation factor vs. Ensembl Cavefish
Match: neurod6b (neurogenic differentiation factor 6-B-like [Source:NCBI gene;Acc:103029581]) HSP 1 Score: 98.9821 bits (245), Expect = 5.635e-24 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHIN 507 MHGLN ALESLR VP + TQKLSKIETLRLA NYI ALS+ +R+G PD L +A+TL GLSQ T NLVA L +N Sbjct: 84 MHGLNDALESLRRVVPCHSKTQKLSKIETLRLARNYIRALSETLRAGTRPDLLAFARTLCAGLSQPTTNLVAGCLQLN 161
BLAST of Neurogenic differentiation factor vs. Ensembl Cavefish
Match: neurod4 (neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]) HSP 1 Score: 93.5893 bits (231), Expect = 8.556e-22 Identity = 44/79 (55.70%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINP 510 MHGLN AL++LR +P ++ TQKLSKIETLRLA NYIWALS+++ +G P++ + + L +GLSQ T+NLVA L + P Sbjct: 99 MHGLNDALDNLRQVMPCYSKTQKLSKIETLRLARNYIWALSEVLENGQSPESHGFMEMLCKGLSQPTSNLVAGCLQLGP 177
BLAST of Neurogenic differentiation factor vs. Ensembl Sea Lamprey
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:30169]) HSP 1 Score: 110.538 bits (275), Expect = 4.394e-29 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+R+G PD L++ +TL GLSQ TANL+A L +NPR Sbjct: 36 MHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRAGTSPDLLSFVQTLCRGLSQPTANLIAGCLQLNPR 115
BLAST of Neurogenic differentiation factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006843.1 (pep scaffold:Pmarinus_7.0:GL488467:178:1220:1 gene:ENSPMAG00000006182.1 transcript:ENSPMAT00000006843.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 49.2914 bits (116), Expect = 1.357e-7 Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIV 405 MH LN AL++LR +P +L+KIETLR A NYIW L++ + Sbjct: 56 MHNLNDALDALRGVLPTLPDDARLTKIETLRFAYNYIWVLTETL 99
BLAST of Neurogenic differentiation factor vs. Ensembl Sea Lamprey
Match: si:dkey-34f9.3 (si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]) HSP 1 Score: 47.3654 bits (111), Expect = 3.235e-7 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFP 423 M +N A E LR HVP F + ++LSKI+TLRLA YI L I+ S P Sbjct: 46 MLSINSAFEELRCHVPTFPYEKRLSKIDTLRLAIAYIALLRDILLSDTDP 95
BLAST of Neurogenic differentiation factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004072.1 (pep scaffold:Pmarinus_7.0:GL492732:1750:4325:-1 gene:ENSPMAG00000003727.1 transcript:ENSPMAT00000004072.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.595 bits (109), Expect = 1.918e-6 Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRS 411 M +N A E LR H+P + ++LSK++TLRLA YI L ++V S Sbjct: 144 MQSINAAFEGLRAHIPTLPYEKRLSKVDTLRLAIGYISFLGELVHS 189
BLAST of Neurogenic differentiation factor vs. Ensembl Nematostella
Match: EDO42924 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZZ0]) HSP 1 Score: 48.1358 bits (113), Expect = 6.576e-8 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 277 HGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSG 414 H +N A +LRL +P +KLSKIETLRLAS+YI LS I+ SG Sbjct: 15 HSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHLSTILISG 60
BLAST of Neurogenic differentiation factor vs. Ensembl Nematostella
Match: EDO43849 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXI0]) HSP 1 Score: 45.8246 bits (107), Expect = 3.699e-7 Identity = 19/44 (43.18%), Postives = 30/44 (68.18%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIV 405 M +N A E LR H+P + ++LSK++TLRLA YI L++++ Sbjct: 15 MQSINEAFEGLRKHIPTLPYEKRLSKVDTLRLAIGYIGFLTEMI 58
BLAST of Neurogenic differentiation factor vs. Ensembl Nematostella
Match: EDO36266 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ30]) HSP 1 Score: 46.595 bits (109), Expect = 4.096e-7 Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVA 489 +H ++ A ESLR VP ++ QKLSK+ LRLA++YI AL+ + S +L K E + Q T L A Sbjct: 15 IHTMSEAFESLRKAVPSYSQDQKLSKLAILRLATSYISALADLTESDTSAKSL---KHFAECVEQCTRALQA 83
BLAST of Neurogenic differentiation factor vs. Ensembl Nematostella
Match: EDO36265 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ29]) HSP 1 Score: 46.9802 bits (110), Expect = 2.384e-6 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPV--FNHTQKLSKIETLRLASNYIWALSKIV 405 MH LN A +SLR +P +N +K SKI TLRLA +YI ALS I+ Sbjct: 80 MHSLNDAFDSLRKAIPKTNYNQEEKPSKIATLRLAIHYIAALSDIL 125
BLAST of Neurogenic differentiation factor vs. Ensembl Medaka
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:101157169]) HSP 1 Score: 107.457 bits (267), Expect = 9.272e-27 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MHGLN ALESLR VP ++ TQKLSKIETLRLA NYIW LS+I+RSG PD +++ L +GLSQ T NLVA L +NPR Sbjct: 103 MHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWTLSEILRSGKAPDLMSFVHALCKGLSQPTTNLVAGCLQLNPR 182
BLAST of Neurogenic differentiation factor vs. Ensembl Medaka
Match: NEUROD2 (neuronal differentiation 2 [Source:NCBI gene;Acc:101159992]) HSP 1 Score: 103.605 bits (257), Expect = 2.508e-25 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MH LN AL++LR VP ++ TQKLSKIETLRLA NYIWALS+I+RSG PD ++Y +TL +GLSQ T NLVA L +N R Sbjct: 115 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSR 194
BLAST of Neurogenic differentiation factor vs. Ensembl Medaka
Match: neurod4 (neurogenic differentiation factor 4 [Source:NCBI gene;Acc:101168209]) HSP 1 Score: 100.908 bits (250), Expect = 2.230e-24 Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINP 510 MHGLN AL++LR +P ++ TQKLSKIETLRLA NYIWALS+++ SG P++L + + L +GLSQ T+NLVA LH+ P Sbjct: 110 MHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLESGQSPESLGFVEMLCKGLSQPTSNLVAGCLHLGP 188
BLAST of Neurogenic differentiation factor vs. Ensembl Medaka
Match: neurod2 (neurogenic differentiation factor 2 [Source:NCBI gene;Acc:101171533]) HSP 1 Score: 93.9745 bits (232), Expect = 7.744e-22 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPR 513 MH LN AL++LR VP ++ TQKLSKIETLRLA NYI AL +I+R+G PD ++Y + L +GLSQ T NLVA L +N R Sbjct: 116 MHDLNSALDNLRKVVPCYSKTQKLSKIETLRLAKNYILALGEILRNGKRPDVVSYVQMLCKGLSQPTTNLVAGCLQLNTR 195
BLAST of Neurogenic differentiation factor vs. Ensembl Medaka
Match: ENSORLT00000027474.1 (neurogenic differentiation factor 4-like [Source:NCBI gene;Acc:101167928]) HSP 1 Score: 89.7373 bits (221), Expect = 2.614e-20 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINP 510 MHGLN ALE+LR +P ++ TQKLSKIETLRLA NYI ALS+ + GL ++ + +TL +GLSQ T+NLVA L + P Sbjct: 137 MHGLNDALENLRSIMPCYSKTQKLSKIETLRLARNYICALSEALEGGLSTESRVFMETLCKGLSQPTSNLVAGCLQLGP 215
BLAST of Neurogenic differentiation factor vs. Planmine SMEST
Match: SMESG000066244.1 (SMESG000066244.1) HSP 1 Score: 374.4 bits (960), Expect = 1.939e-132 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1 Query: 94 MFDLNLKIFTFSSDSLMMTTSSVDXXXXXXXXXXXXXMTXXXXXXXXXXXXXXXXXXXXXMHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLLXXXXXXXXXXXEKLYDCQELDPTDQQYPVNTIIKYPFYCQSSNQTGQVYEEKNDFSPNSSFMHQECALNVDNYVIQGPFPCALCNHY 780 MFDLNLKIFTFSSDSLMMTTSSVDIKIPKKRGPKKKPMTEERRERLVQRRARANSRERNRMHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLLSKSSSNFTNSSEKLYDCQELDPTDQQYPVNTIIKYPFYCQSSNQTGQVYEEKNDFSPNSSFMHQECALNVDNYVIQGPFPCALCNHY Sbjct: 1 MFDLNLKIFTFSSDSLMMTTSSVDIKIPKKRGPKKKPMTEERRERLVQRRARANSRERNRMHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLLSKSSSNFTNSSEKLYDCQELDPTDQQYPVNTIIKYPFYCQSSNQTGQVYEEKNDFSPNSSFMHQECALNVDNYVIQGPFPCALCNHY 229
BLAST of Neurogenic differentiation factor vs. Planmine SMEST
Match: SMESG000029000.1 (SMESG000029000.1) HSP 1 Score: 48.9062 bits (115), Expect = 1.014e-6 Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIV 405 M+ LN A +SLR VP F + ++LS+IETLRLA YI +++++ Sbjct: 157 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 200
BLAST of Neurogenic differentiation factor vs. Planmine SMEST
Match: SMESG000029000.1 (SMESG000029000.1) HSP 1 Score: 48.9062 bits (115), Expect = 1.036e-6 Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIV 405 M+ LN A +SLR VP F + ++LS+IETLRLA YI +++++ Sbjct: 150 MYSLNEAFDSLRKRVPTFAYEKRLSRIETLRLAITYICFMTELL 193
BLAST of Neurogenic differentiation factor vs. Planmine SMEST
Match: SMESG000044960.1 (SMESG000044960.1) HSP 1 Score: 47.3654 bits (111), Expect = 2.967e-6 Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKT-LTEGLSQTTANLVASSL 498 M +N A E LR+H+P + ++LSK++TLR+A YI L I++ + Y KT + QT +NL +S L Sbjct: 59 MQSINDAFEKLRVHIPTMPYEKRLSKVDTLRMAIGYINFLGGIMQVDQGEE--IYEKTFIANDQFQTESNLKSSHL 132
BLAST of Neurogenic differentiation factor vs. Planmine SMEST
Match: SMESG000000956.1 (SMESG000000956.1) HSP 1 Score: 47.7506 bits (112), Expect = 3.044e-6 Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 274 MHGLNHALESLRLHVPVFNHTQKLSKIETLRLASNYIWALSKIVRS 411 M +N A E LR H+P + ++LSK++TLRLA +YI L ++++S Sbjct: 115 MQSINEAFEGLRCHIPTMPYEKRLSKVDTLRLAISYIGFLQELIKS 160 The following BLAST results are available for this feature:
BLAST of Neurogenic differentiation factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Neurogenic differentiation factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Neurogenic differentiation factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of Neurogenic differentiation factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Neurogenic differentiation factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Neurogenic differentiation factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Neurogenic differentiation factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010251 ID=SMED30010251|Name=Neurogenic differentiation factor|organism=Schmidtea mediterranea sexual|type=transcript|length=828bpback to top protein sequence of SMED30010251-orf-1 >SMED30010251-orf-1 ID=SMED30010251-orf-1|Name=SMED30010251-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=230bp MFDLNLKIFTFSSDSLMMTTSSVDIKIPKKRGPKKKPMTEERRERLVQRRback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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