DDE_3 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010233 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of DDE_3 domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000000571.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:1:80446753:80447784:1 gene:ENSXETG00000005985.1 transcript:ENSXETT00000000571.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.9954 bits (136), Expect = 2.288e-8 Identity = 68/302 (22.52%), Postives = 132/302 (43.71%), Query Frame = 3 Query: 231 PVRKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFV--TFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDE-----------CYFNTWARKTTGRSENGERIFVK---VPTTV--GPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINE------VTTKLNETGFILVHDN-----VRIYDENISPNN-QMVKLPPYSSFLNPIEEVFIKIKENL 1046 P K I ++ + K++E + G+ + A+ K +G+ ++T+ SII+ + + G V + TKI+ ++L+ K+ +T +E+ L+ + + +I + L KN + F + + + KN + L K ++ + W N TL+ DE CY W + T F K +PT G ++ + +GP ++ G++ YQ + E KL + ++L DN + E + N + ++ P S LNPIE ++ +K+ + Sbjct: 2 PRSKEIEEQMRTKVIEIYQSGKGYKAISKALGLQRTTVRSIIHKWQKHGTVVNLPRSGRPTKITPRAQRQLIREATKDPRTTSKELQASLASIKVSVHDSTIRKRLGKNGLHGRFPRRKPLLSKKNIMARLNFAKKHLND-CQDFWEN--TLWTDETKVELFGRCVSCYI--WRKSNTA--------FQKKNIIPTVKYGGGSVMVWGCFAASGPGRLAVIDGTMNSTVYQKILKENVRPSVRQLKLKRS-WVLQQDNDPKHTSKSTSEWLKKNKMKTLEWPSQSPDLNPIEMLWHDLKKAV 289
BLAST of DDE_3 domain-containing protein vs. TrEMBL
Match: A0A0C2JI12 (DDE_3 domain-containing protein OS=Thelohanellus kitauei OX=669202 GN=RF11_01522 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.939e-32 Identity = 95/337 (28.19%), Postives = 172/337 (51.04%), Query Frame = 3 Query: 246 ISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPG-TKNTKISEEMPQKLLNFIDKNYCSTLEEM-SKYLSQQNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLE--QGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTK---LNETGFILVHDNVRIYD-ENIS-----PNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQGFVSMNVNNRFIILNDAINKELKKEDYSDLKSYYKHIRKFFPKSLLKEV 1217 +S D+ ++V+A +KG+ + +G+A+STINS+I +++Q+G++ K G + K++E+ +++ +++D N L + +K + +I + +I R L++ ++++V +N++S L +R+ Y R LE Q + + ++IDEC N R + GRS+ G VP NI + AM VNG + HK + ++ + +I+E+ K LN +V DNV + E IS + ++ LPPYS F+NPIE +F K K +R S + N+ ++ SD YY H+ ++ + L +EV Sbjct: 6 LSDLDRKRIVDAYQKGQKASEISLVLGVARSTINSVIKIFHQSGRIDSNKRGYIQPEKLNEDQKERIKSWVDDNAGIPLRTIVTKVQEEMDISVGKSTIDRILQRFHYSWKRVSIIPERRNNESTLNIRERYATRYLELLQSFREHQFIFIDECGVNISMRTSHGRSKIGSPAIHVVPNLRSRNISICAAMNVNGMLLHKWHDRAFNRDLFGNYIDELLEKIRALNIEHATIVMDNVSFHHCEEISQQISEAGHTLLFLPPYSPFMNPIENMFSKWKREIRYRRSENSEELYQNITAASSLITS-----------SDCSGYYSHMFRYINRCLRREV 331
BLAST of DDE_3 domain-containing protein vs. TrEMBL
Match: A0A267DQJ8 (DDE_3 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig002000g2 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.147e-31 Identity = 81/292 (27.74%), Postives = 153/292 (52.40%), Query Frame = 3 Query: 216 PSKEKPVRKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKV-TRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQ---QNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMG-VNGPIHHKLLIGSLAKESYQTFINEVTTKLNETGFILVHDNVRIYDE--NISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQ 1070 P+ ++ R +SQ+D+ +LV A E++ L +Q+ I + + ++I + +TG+V + G K +S+EM + L+ F+ +TL++M ++L Q +I +ISR L +T + +R+ N+D + R+ + + L+ +G K ++ DE N W +T GR+ G R V G N+ + LA+ + G ++ K++ G + +E + F E+ ++E F L+HDN R + + + + LPPYS FLN E +K +L++S+S ++ Sbjct: 4 PAAQR--RVAVSQQDRRRLVNAFVLNEDWLNLAEQLNIPRQSARNVIVKFERTGRVEAEKRGGNKPKALSDEMIEALVGFVADTPAATLQDMRRHLMQAFPDWQACTIQTISRALDGQLITVKLLRTIPNAWNADRIKHERREFAKWLMTEG-MGKLLVFCDEMGCNVWTARTQGRAAEGVRAVRIVANQRGRNVTMCLAVSPMRGLVYWKIVRGGMTRELFAEFFAELAALVDEP-FCLLHDNARAHWDPPAMGEEQEYRPLPPYSPFLNMTERAIAAVKASLKRSLSRVE 291
BLAST of DDE_3 domain-containing protein vs. TrEMBL
Match: W4XP44 (DDE_3 domain-containing protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.795e-30 Identity = 92/352 (26.14%), Postives = 164/352 (46.59%), Query Frame = 3 Query: 246 ISQRDKMKLVEAME-KGENFHALGKQMGIAKSTINSIIYLYNQTGKVTR-GKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQ---QNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENG--ERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNE-----TGFILVHDNVRIY-----DENISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMS-----------NIQGFVSMNVNN-RFIILNDAINKELKKEDYSDLKSYYKHIRKFFPKSLLKE 1214 IS D+ +LVEA E G+++ L +GI +ST SI+ Y +G++ + + G +N+KI EEM L + ID N TL +M L + Q +S +I+R L +T + +N+ VL+ R+ Y LE G ++IDEC +N W R+T GR+ G R V N+ ++ V G +HH++ ++ + S++ F+ + NE +L++DN R + E+++ + +LPPYS FLN E K ++++++ G +N+ R L + + + + +Y H + + P+ L ++ Sbjct: 10 ISNVDRRRLVEAFEGNGQDYLELADNLGIKRSTARSIVATYLDSGRIEKLPRGGARNSKIDEEMKNYLQDIIDTNPLLTLRQMKDKLREDLPQKPEVSTTTIARALDAMLMTLKLAEDVPDARNAPRVLQQREEYAEWFLEHG-VLANCVFIDECGYNIWTRRTQGRAPRGVPARRVVHGQRGRNCNVSFAVSAAV-GLVHHEMAFETVTRASFERFLAATVAECNEMFPDDAPVVLIYDNARPHVRAELPEDVNSLIETKRLPPYSPFLNMTEMAHSSFKSAVKRTLALPAWQRRVGDRVAAGRAGVNLQQWRCDALREVAVQCIDTVTPAKCTQWYNHSQTYMPRCLARQ 359
BLAST of DDE_3 domain-containing protein vs. TrEMBL
Match: W4Z6F7 (DDE_3 domain-containing protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.295e-29 Identity = 92/354 (25.99%), Postives = 165/354 (46.61%), Query Frame = 3 Query: 246 ISQRDKMKLVEAME-KGENFHALGKQMGIAKSTINSIIYLYNQTGKVTR-GKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQ---QNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENG--ERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNE-----TGFILVHDNVRIY-----DENISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQGFVSMNVNNRFIILNDAINKELKKEDY--------------SDLKSYYKHIRKFFPKSLLKE 1214 IS D+ +LVEA E G+++ L +GI +ST SI+ Y +G++ + + G +N+KI EEM L + ID N TL +M L + Q +S +I+R L +T + +N+ VL+ R Y LE G ++IDEC +N W R+T GR+ G R V N+ ++ V G +HH++ ++ + S++ F+ + NE +L++DN R + E+++ + +LPPYS FLN E K ++++++ + + V +R + +N + + D + +Y H + + P+ L ++ Sbjct: 10 ISNVDRRRLVEAFEGNGQDYLELADNLGIKRSTARSIVATYLDSGRIEKLPRGGARNSKIDEEMKNYLQDIIDTNPLLTLRQMKDKLREDLPQKPEVSTTTIARALDVMLMTLKLAEDVPDARNAPRVLQQRGEYAEWFLEHG-VLANCVFIDECGYNIWTRRTQGRAPRGVPARRVVHGQRGRNCNVSFAVSAAV-GLVHHEMAFETVTRASFERFLAAKVAECNEMFPDDAPVVLIYDNARPHVRAELPEDVNSLIETKRLPPYSPFLNMTEMAHSSFKSAVKRTLA-LPAW-QRRVGDRVAAGREGVNLQQWRCDTLREVAVQCIDTVTPAKCTQWYNHSQTYMPRCLERQ 359
BLAST of DDE_3 domain-containing protein vs. TrEMBL
Match: A0A1I8GL13 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.414e-28 Identity = 84/291 (28.87%), Postives = 149/291 (51.20%), Query Frame = 3 Query: 237 RKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTR-GKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQ---QNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMG-VNGPIHHKLLIGSLAKESYQTFINEVTTKLN----ETGFILVHDNVRIYDE----NISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQ 1070 R+ +S D+ +L+ A +KGE+F L Q+GI ++T SI+ ++G+V + G KN K EM + L +++N TL+EM+ L Q + H+S ++S L T + R ++NS V+ R+ + + + S+ + ++IDE FNTW R++ GRS G+R++ +V G I + LA+ G +H + + KE + F+ + ++ +V DNV +++ + ++ +LPPYS FL P+E K L++ +S IQ Sbjct: 889 RQPVSNHDRQRLLSAYQKGEDFILLASQLGIKRTTAYSIV----RSGRVEKLSCGGAKNVKWDGEMQEYLCAIVEQNPLLTLKEMNTMLRQAFPEKQHVSEKTLSIKLDGALFTTKLARDLPAERNSPRVVAAREQFAQWMCSPEASDTEKIFIDEFGFNTWMRRSYGRSLRGQRVYRQVSGQKGQRITVCLAVSPAAGIVHFQSYDSGMTKERFGEFLTITIANFHSVFPDSSISVVIDNVSSHNDAESYEVEDAVEVRRLPPYSPFLTPVENAISCWKAALKRRLSAIQ 1175
BLAST of DDE_3 domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000044521.1 (pep primary_assembly:Astyanax_mexicanus-2.0:22:28076125:28077147:1 gene:ENSAMXG00000034360.1 transcript:ENSAMXT00000044521.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.2174 bits (121), Expect = 9.106e-7 Identity = 64/294 (21.77%), Postives = 134/294 (45.58%), Query Frame = 3 Query: 231 PVRKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFVTFRKVRSC--IVDKNSDSVLELRKTYVRRLLEQG----WSNKKTL----YIDECYFNTWARKTTGRSENGERIFVKVPTT--VGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFI-NEVTTKLNETG----FILVHDN--------VRIYDENISPNNQMVKLPPYSSFLNPIEEVFIKIK 1037 P RK IS + K+V+ +GE + A+ K+ ++++ + II Y +T V + KIS+ + +K++ ++KN ++ + + L+ + +S ++ R L + + + R ++ ++ + L + ++ E WS++ L ++D + W RK G + N + VPT G +I L +G + + G++ KE Y + N + T + G ++ DN V+ + ++ N +++ P S LNPIE ++ ++K Sbjct: 2 PKRKEISLDLRQKIVDLHFQGEGYTAISKRFMVSRTAVRCIIAKYKETKSVQNKHGRGRKRKISKTLQRKIIRDVNKNPWTSAKMIVSELATSGLDVSRKTVVRALHRGGLRGHRPRKTPLLLQRHIKARLNFARDNLKHKSEFWKSVLWSDETKLEQFGHMDAAF--VWRRK--GEAFNPKNT---VPTVKHAGGSIMLWGCFAASGTGNLVRVHGTMKKEDYVDILKNNIRTSASSLGLGRRWVFQQDNDPKHTSKLVKTFLKDTKIN--VLEWPSQSPDLNPIENLWRELK 286
BLAST of DDE_3 domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000031052.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000043.1:1178862:1180221:-1 gene:ENSAMXG00000033528.1 transcript:ENSAMXT00000031052.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.8322 bits (120), Expect = 1.181e-6 Identity = 66/295 (22.37%), Postives = 122/295 (41.36%), Query Frame = 3 Query: 240 KTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFVTFRKVR--SCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFN---------TWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEV------------TTKLNETGFILVHDN-----VRIYDENISPNN-QMVKLPPYSSFLNPIEEVFIKIK 1037 + +S R+K +++ ++G++ A+GK +GIA +TI +++ TG ++ + + K + ++++ + KN +T+ +++ L + + +S ++ R L++ R I KN + LE + Y R + W+ L+ DE N W +K T + VK G N+ M +G + I ++ + +EV TKL FIL DN + E I + + P S LNPIE F +K Sbjct: 4 RELSMREKQAILKHRKEGKSIRAIGKTLGIATTTIWNVLKKKETTGVLSNRRRTGRPRKTTPTDERRIVLAVKKNPKTTVSQITSDLHRAGVKVSQSTVRRRLREQTYGGHTARCKPLISSKNRKARLEFARKY-RDEPQTFWNT--VLWTDETKINLYQSDGKAKVWRKKGTAQDPRHTSSSVK---HGGGNVMAWACMAASG-TGSIIFIDNVTDDGSSKINSEVYRQVLSANVRRNATKLIGRSFILQQDNDPKHTAKKTKEFIRGKKWKTLDWPSQSPDLNPIEHAFYLLK 291
BLAST of DDE_3 domain-containing protein vs. Planmine SMEST
Match: SMESG000041908.1 (SMESG000041908.1) HSP 1 Score: 347.436 bits (890), Expect = 6.541e-108 Identity = 165/322 (51.24%), Postives = 231/322 (71.74%), Query Frame = 3 Query: 237 RKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNETGFILVHDNVRIYDENISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQGFVSMNVNNRFIILNDAINKELKKEDYSDLKSYYKHIRKFFPKS 1202 RK IS+ DK++++ AME GE++ GK +GIA+++I +IIY Y + GK+++GK G +KISEE KLL+F++KN ++LEEM +L +N+ +S +ISRFL+ + +T +++R + ++NSD VL+LR Y R LE+ W + + +YIDEC FNTW + GR++ GER++ +PT G N+ L LA+GVNGP+HHKL++GS K++YQ FINE+T KLN TGF L+HDN I+ IS NN + LPPYS FLNPIE VF KIK N+RKS+S G SMN +RF L DA++ EL KEDY DL +Y+ HIR+FFPKS Sbjct: 505 RKKISEIDKIRIINAMENGEDYFHFGKLLGIARNSIKTIIYKYRKFGKLSQGKIGGSISKISEENGNKLLDFVEKNVYASLEEMKNFLISENLSVSTNTISRFLENHLITTKQIRPSVAERNSDRVLDLRMEYTTRYLEEAWMDSQLIYIDECGFNTWTSQKLGRNKKGERLYATLPTNRGRNMSLALAIGVNGPVHHKLVVGSYKKDTYQIFINEITVKLNGTGFRLIHDNASIHGGAISLNNVIEHLPPYSPFLNPIESVFSKIKFNIRKSISRAGGLSSMNFQSRFDFLKDALDNELVKEDYRDLTNYFWHIRRFFPKS 826
BLAST of DDE_3 domain-containing protein vs. Planmine SMEST
Match: SMESG000005064.1 (SMESG000005064.1) HSP 1 Score: 331.643 bits (849), Expect = 5.562e-103 Identity = 159/336 (47.32%), Postives = 227/336 (67.56%), Query Frame = 3 Query: 186 ISDASSDETLPSKEKPVRKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNETGFILVHDNVRIYDENISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQGFVSMNVNNRFIILNDAINKELKKEDYSDLKSYYKHIRKFF 1193 +S + T P IS+ DK++++ AME GE++ GK +GI++++I +IIY Y + K+++GK G +KISEE KLL+F++KN ++L EM +L +N+ +S +ISRFL + +T +++R + ++NSD VL+ R Y R LE+ W + + +YIDEC FNTW + GR++ GER++ +PT G N+ L LA GVNGP+HHKL++GS K++YQ FINE+T KLN TG+ L+HDN I+ IS NN + LPPYS FLN IE VF KIK N+RKS+S GF SMN +RF L DA++ EL KEDYSDL +Y+ HIR+FF Sbjct: 110 LSKVARPSTTPETLTKKHTLISEIDKIRIINAMENGEDYFYFGKLLGISRNSIKTIIYKYRKFEKLSQGKIGGNKSKISEEHGNKLLDFVEKNVYASLVEMKNFLISENLSVSTNTISRFLGNHLITTKQIRPSVAERNSDRVLDFRMKYTTRYLEEAWMDSQLIYIDECGFNTWTSQKLGRNKKGERLYATLPTNRGRNMSLALAFGVNGPVHHKLVVGSYKKDTYQIFINEITVKLNGTGYRLIHDNASIHGGAISLNNAIEHLPPYSPFLNLIESVFSKIKFNIRKSISRAGGFSSMNFQSRFDFLKDALDNELVKEDYSDLTNYFGHIRRFF 445
BLAST of DDE_3 domain-containing protein vs. Planmine SMEST
Match: SMESG000005064.1 (SMESG000005064.1) HSP 1 Score: 302.753 bits (774), Expect = 1.533e-92 Identity = 146/317 (46.06%), Postives = 211/317 (66.56%), Query Frame = 3 Query: 186 ISDASSDETLPSKEKPVRKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNETGFILVHDNVRIYDENISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQGFVSMNVNNRFIILNDAINKEL 1136 +S + T P IS+ DK++++ AME GE++ GK +GI++++I +IIY Y + K+++GK G +KISEE KLL+F++KN ++L EM +L +N+ +S +ISRFL + +T +++R + ++NSD VL+ R Y R LE+ W + + +YIDEC FNTW + GR++ GER++ +PT G N+ L LA GVNGP+HHKL++GS K++YQ FINE+T KLN TG+ L+HDN I+ IS NN + LPPYS FLN IE VF KIK N+RKS+S GF SMN +RF L DA++ EL Sbjct: 93 LSKVARPSTTPETLTKKHTLISEIDKIRIINAMENGEDYFYFGKLLGISRNSIKTIIYKYRKFEKLSQGKIGGNKSKISEEHGNKLLDFVEKNVYASLVEMKNFLISENLSVSTNTISRFLGNHLITTKQIRPSVAERNSDRVLDFRMKYTTRYLEEAWMDSQLIYIDECGFNTWTSQKLGRNKKGERLYATLPTNRGRNMSLALAFGVNGPVHHKLVVGSYKKDTYQIFINEITVKLNGTGYRLIHDNASIHGGAISLNNAIEHLPPYSPFLNLIESVFSKIKFNIRKSISRAGGFSSMNFQSRFDFLKDALDNEL 409
BLAST of DDE_3 domain-containing protein vs. Planmine SMEST
Match: SMESG000069530.1 (SMESG000069530.1) HSP 1 Score: 268.855 bits (686), Expect = 2.177e-88 Identity = 125/242 (51.65%), Postives = 169/242 (69.83%), Query Frame = 3 Query: 486 MSKYLSQQNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNETGFILVHDNVRIYDENISPNNQMVKLPPYSSFLNPIEEVFIKIKENLRKSMSNIQGFVSMNVNNRFIILNDAINKELKKEDYSDLKSYYKHIRKFFPKSLLK 1211 M +L +N+ +S +ISRFL + +T +++R + ++NSD VL+LR Y R LE+ W + + +YIDEC FNTW + GR++ GER++ +PT G N+ L LA+GVNGP+HHKL++GS K++YQ FINE+T KLN TGF L+HDN I+ IS NN + LPPYS FLNPIE VF KIK N+RKS+S G SMN +RF L DA++ EL KEDY DL +Y+ HIR+FFPK + K Sbjct: 1 MKNFLISENLSVSTNTISRFLGNHLITTKQIRPSVAERNSDRVLDLRMEYTTRYLEEAWMDSQLIYIDECGFNTWTSQKLGRNKKGERLYATLPTNRGRNMSLALAIGVNGPVHHKLVVGSYKKDTYQVFINEITVKLNGTGFRLIHDNASIHGGAISLNNVIEHLPPYSPFLNPIESVFSKIKFNIRKSISRAGGLSSMNFQSRFDFLKDALDNELVKEDYRDLTNYFWHIRRFFPKCIKK 242
BLAST of DDE_3 domain-containing protein vs. Planmine SMEST
Match: SMESG000050992.1 (SMESG000050992.1) HSP 1 Score: 226.483 bits (576), Expect = 2.526e-65 Identity = 103/232 (44.40%), Postives = 161/232 (69.40%), Query Frame = 3 Query: 219 SKEKPVRKTISQRDKMKLVEAMEKGENFHALGKQMGIAKSTINSIIYLYNQTGKVTRGKPGTKNTKISEEMPQKLLNFIDKNYCSTLEEMSKYLSQQNIHISIYSISRFLKKNFVTFRKVRSCIVDKNSDSVLELRKTYVRRLLEQGWSNKKTLYIDECYFNTWARKTTGRSENGERIFVKVPTTVGPNICLVLAMGVNGPIHHKLLIGSLAKESYQTFINEVTTKLNETGF 914 S V + IS+ DK++++ AME GE++ GK +GI +++I ++IY Y + GK+++GK G +KISE+ KLL+F++KN ++LEEM +L +N+ +S +ISRFL + +T +++R + ++NSD VL+LR Y R LE+ W + + +YIDEC FN W + GR++ GER++ +PT G N+ L LA+GVNG +HHKL++GS K++YQ FINE+T KLN TG+ Sbjct: 956 SSSGGVTRRISEIDKIRIINAMENGEDYFHFGKLLGIFRNSIKTLIYKYRKFGKLSQGKIGGSKSKISEDYGNKLLDFVEKNVYASLEEMKNFLIFENLSVSTNTISRFLGNHLITTKQIRPSVAERNSDRVLDLRMKYTTRYLEEAWMDSQLIYIDECGFNIWTSQKLGRNKKGERLYSTLPTNRGRNMSLALAIGVNGSVHHKLIVGSYKKDTYQIFINEITVKLNGTGY 1187 The following BLAST results are available for this feature:
BLAST of DDE_3 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of DDE_3 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of DDE_3 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of DDE_3 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of DDE_3 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010233 ID=SMED30010233|Name=DDE_3 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1253bpback to top protein sequence of SMED30010233-orf-1 >SMED30010233-orf-1 ID=SMED30010233-orf-1|Name=SMED30010233-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=356bp MDACKEISDASSDETLPSKEKPVRKTISQRDKMKLVEAMEKGENFHALGKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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