SMED30010053

Overview
NameSMED30010053
Smed IDSMED30010053
Length (bp)1920
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30010053 (SMED30010053) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30010053 (SMED30010053) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30010053 (SMED30010053) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30010053 (SMED30010053) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30010053

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parenchymal cellSMED30010053SMESG000042332.1 dd_Smed_v4_8815_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30010053SMESG000042332.1 dd_Smed_v4_8815_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SMED30010053 vs. TrEMBL
Match: T1FR79 (PH domain-containing protein OS=Helobdella robusta OX=6412 GN=20211326 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 5.132e-6
Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 3 
Query:  165 IFQKRWRKRYFVLFK-----NIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGL 467
            +F  +W++R+FVL+       I +     L Y+ SK L  +  +G INLE+   +  ++     K NVFS+ T   KG  R YYL A++ E M  WVD+L   LGL
Sbjct:   25 LFGAKWKRRFFVLYAPPMALGIVESRGAMLEYYSSKKL--NTKVGIINLEDCDEVLSNLDSDTYK-NVFSLHT-KHKGKERTYYLVADTEEEMNNWVDQLCRVLGL 126
[Close]
BLAST of SMED30010053 vs. Ensembl Nematostella
Match: EDO44466 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVJ5])

HSP 1 Score: 55.0694 bits (131), Expect = 6.486e-8
Identity = 41/123 (33.33%), Postives = 60/123 (48.78%), Query Frame = 3 
Query:  168 FQKRWRKRYFVLFKNIDKPHDVHLLYFKS----KPLPDSKSLGSINLENFRSLAFDVGKKLNK-TNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDN----GNKTRNSTPI 509
              + W++R+FVL  N        L Y+KS    KP+ D      I+L   R +  ++  + NK   VFS+ T      NR YY+ A+S EIM TWV+KL    G    +    G ++R + PI
Sbjct:   21 LMRSWQRRFFVLRSN------KKLFYYKSEKDKKPVKDP-----IDLHTCRCVEANL--QHNKFPYVFSVNTV-----NRTYYMVADSQEIMDTWVEKLCFVCGFERQDESSPGTRSRPTVPI 125
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BLAST of SMED30010053 vs. Planmine SMEST
Match: SMESG000042332.1 (SMESG000042332.1)

HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0
Identity = 538/539 (99.81%), Postives = 538/539 (99.81%), Query Frame = 3 
Query:   21 MAKQSYDPNNIQIIYEGIXXXXXXXXXXXXFSMIAKFSCATDNEKTSIIFQKRWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSSDNSKFSASMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESNTEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFENDQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKXXXXXXXXXXXXXXXXXXXXKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPILPLSRSQXXXXXXXXXXXXXVKSDDPRNNNSIDDASTTLNYLDATNLLLENRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDPNISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE 1637
            MAKQSYDPNNIQIIYEGILKKSPPLKSKSLFSMIAKFSCATDNEKTSIIFQKRWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSSDNSKFS SMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESNTEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFENDQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKSDDSSSTSSCYSSTNTNSSTKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPILPLSRSQNPNLTLPTKPPKTVKSDDPRNNNSIDDASTTLNYLDATNLLLENRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDPNISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE
Sbjct:    1 MAKQSYDPNNIQIIYEGILKKSPPLKSKSLFSMIAKFSCATDNEKTSIIFQKRWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSSDNSKFSGSMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESNTEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFENDQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKSDDSSSTSSCYSSTNTNSSTKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPILPLSRSQNPNLTLPTKPPKTVKSDDPRNNNSIDDASTTLNYLDATNLLLENRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDPNISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE 539
[Close]
BLAST of SMED30010053 vs. Planmine SMEST
Match: SMESG000042332.1 (SMESG000042332.1)

HSP 1 Score: 942.569 bits (2435), Expect = 0.000e+0
Identity = 522/539 (96.85%), Postives = 522/539 (96.85%), Query Frame = 3 
Query:   21 MAKQSYDPNNIQIIYEGIXXXXXXXXXXXXFSMIAKFSCATDNEKTSIIFQKRWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSSDNSKFSASMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESNTEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFENDQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKXXXXXXXXXXXXXXXXXXXXKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPILPLSRSQXXXXXXXXXXXXXVKSDDPRNNNSIDDASTTLNYLDATNLLLENRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDPNISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE 1637
            MAKQSYDPNNIQIIYEGILKKSPPLKSKSLFSMIAK                RWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSSDNSKFS SMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESNTEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFENDQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKSDDSSSTSSCYSSTNTNSSTKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPILPLSRSQNPNLTLPTKPPKTVKSDDPRNNNSIDDASTTLNYLDATNLLLENRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDPNISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE
Sbjct:    1 MAKQSYDPNNIQIIYEGILKKSPPLKSKSLFSMIAK----------------RWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAFDVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLNNDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSSDNSKFSGSMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESNTEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFENDQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKSDDSSSTSSCYSSTNTNSSTKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPILPLSRSQNPNLTLPTKPPKTVKSDDPRNNNSIDDASTTLNYLDATNLLLENRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDPNISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE 523
The following BLAST results are available for this feature:
BLAST of SMED30010053 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
T1FR795.132e-636.79PH domain-containing protein OS=Helobdella robusta... [more]
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BLAST of SMED30010053 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO444666.486e-833.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30010053 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30010053 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000042332.10.000e+099.81SMESG000042332.1[more]
SMESG000042332.10.000e+096.85SMESG000042332.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30010053 ID=SMED30010053|Name=SMED30010053|organism=Schmidtea mediterranea sexual|type=transcript|length=1920bp
CTATATAAATCTTATATGAGATGGCAAAACAGTCTTATGATCCTAATAAC
ATACAGATAATTTATGAAGGAATTCTGAAAAAATCACCTCCACTGAAATC
GAAATCCTTATTCAGCATGATAGCTAAGTTCAGTTGTGCAACGGATAACG
AGAAAACATCAATCATATTTCAAAAGAGATGGAGAAAACGATATTTTGTT
CTATTCAAAAATATTGATAAACCTCATGATGTTCATTTGCTTTATTTCAA
AAGCAAACCATTACCTGATAGCAAAAGTTTGGGTAGTATAAACTTGGAAA
ATTTTCGAAGTTTGGCTTTTGATGTTGGGAAAAAATTAAATAAAACAAAT
GTATTTTCAATCCAAACAACAGACGATAAAGGCAATAATCGAGATTATTA
TTTGAGTGCAAATTCATTTGAAATTATGAAAACCTGGGTTGATAAACTTG
TTGCTTGTTTGGGTCTCAATAACGATAATGGCAATAAAACTCGTAATAGT
ACTCCGATTATTCAGTCACCGCATAACCACAGTGTTAGGGGTATCCCACG
CTCATCTCAGATCCGACCTGCAATGTCAACTGTACAAACAATGCAAGGAA
GGTCAGCTAATTTTTCATCGGATAATTCAAAATTCTCAGCTAGTATGTAT
CAAAACGAAAATTCTCTCACATATTACAACATGGATCGGTGCCGCAATCC
CAGGCTACCAGAAACTCCAAAGGATCTAAATGAAGACGATGATACATATA
AATTTCCCTGTGAATCAAATACTGAACACTCATATTTCAATCTTGGTGAT
GTCTCAGTAACTCCTGTTCCCAAAGTGGAACCAAGTTTTGATCAAGTGTT
TTTTGGGAACGATCAAACCTTTTCCGATTACACGCCAGATCTCAAACTTT
CTAACACACAATTTGAAAATGATCAGATCAATTTGAAATCTAATGAATCA
GTATTCAACAAAAATCTTATCGATCTCAAGCAAAATCAATTCAACGATTC
GATAAACTTTGAGTCCACTGAACATGATTTTAATTTCGAATTACCGAAAA
GAATTAAAAGCGACGACTCGTCGAGCACAAGCAGCTGTTATTCATCTACG
AATACTAATTCGTCTACAAAGGATGCCGAATTTCCAAATGATTCAGTTTC
ATTTAAAGAATTAAAAGGATCAGAGCCTCCTCAGATTCCAAAACGATTGA
ATGTTCCAGAAAATCCTATTTTGCCTTTGTCTAGATCCCAGAATCCTAAT
TTAACCCTACCAACCAAACCTCCAAAGACTGTCAAATCTGATGATCCACG
AAACAATAATTCAATTGATGATGCTTCGACTACACTCAATTATTTGGACG
CCACAAACTTACTTTTAGAAAACAGACCAATCCACAATCAAGGATTTCCG
AATGTTTTGGATTCTTTTTCTCCAGTCAATTATGATTCACCGAAAAATTC
TCCAAGTTCAAAAAATCTTACTGAATTAACTCCTGGACTTGATTTATTGG
TAACTCTTTCTTTCGATCCTAACATTTCTGTTGCGGGGCAGAATTCCAGA
GATGTTCCACTAATAGAATACAGTGAAATAAATGATGCCAGAACCGAGGG
GCTGCATAAACTTAATGAAAGAATTCTGAAAAATGAATAATTGCTAGTTG
AGAAATGTAATTGTTTGTTGACTGGAATTGTTTGAATGAAATAAAATATG
TATAAATAATTATATTTCCTTGATTGAATTATTGTGTGTGCTGAAATCAT
TTGGATTATCAATGGTAATTATATTCTTTTGCTCAGTTTTTTGTTCATCA
CTTTCTAGTAGGCAAAATATTTCTCTCAGTGATTCACTTATTTTCATGTG
GGTAAAACTGTAATTTTCAATCTATGGTTTGTATAAATTCCACCGAGATT
TAATACATTTTATTGTGCTC
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protein sequence of SMED30010053-orf-1

>SMED30010053-orf-1 ID=SMED30010053-orf-1|Name=SMED30010053-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=540bp
MAKQSYDPNNIQIIYEGILKKSPPLKSKSLFSMIAKFSCATDNEKTSIIF
QKRWRKRYFVLFKNIDKPHDVHLLYFKSKPLPDSKSLGSINLENFRSLAF
DVGKKLNKTNVFSIQTTDDKGNNRDYYLSANSFEIMKTWVDKLVACLGLN
NDNGNKTRNSTPIIQSPHNHSVRGIPRSSQIRPAMSTVQTMQGRSANFSS
DNSKFSASMYQNENSLTYYNMDRCRNPRLPETPKDLNEDDDTYKFPCESN
TEHSYFNLGDVSVTPVPKVEPSFDQVFFGNDQTFSDYTPDLKLSNTQFEN
DQINLKSNESVFNKNLIDLKQNQFNDSINFESTEHDFNFELPKRIKSDDS
SSTSSCYSSTNTNSSTKDAEFPNDSVSFKELKGSEPPQIPKRLNVPENPI
LPLSRSQNPNLTLPTKPPKTVKSDDPRNNNSIDDASTTLNYLDATNLLLE
NRPIHNQGFPNVLDSFSPVNYDSPKNSPSSKNLTELTPGLDLLVTLSFDP
NISVAGQNSRDVPLIEYSEINDARTEGLHKLNERILKNE*
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protein sequence of SMED30010053-orf-2

>SMED30010053-orf-2 ID=SMED30010053-orf-2|Name=SMED30010053-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=107bp
MISAHTIIQSRKYNYLYIFYFIQTIPVNKQLHFSTSNYSFFRILSLSLCS
PSVLASFISLYSISGTSLEFCPATEMLGSKERVTNKSSPGVNSVRFFELG
EFFGES*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 14..151
e-value: 1.6E-10
score: 50.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 16..147
e-value: 4.5E-14
score: 52.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 43..149
score: 12.235
IPR011993PH-like domain superfamilyGENE3DG3DSA:2.30.29.30coord: 5..159
e-value: 4.5E-16
score: 60.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..436
NoneNo IPR availablePANTHERPTHR45960FAMILY NOT NAMEDcoord: 13..421
NoneNo IPR availablePANTHERPTHR45960:SF2PROTEIN DAUGHTER OF SEVENLESScoord: 13..421
NoneNo IPR availableCDDcd00821PHcoord: 53..144
e-value: 1.00393E-13
score: 64.8713
NoneNo IPR availableSUPERFAMILYSSF50729PH domain-likecoord: 50..167