ATP-binding cassette sub-family A member 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30010001 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 38Note: Hover over icons to view figure legend
Homology
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Human
Match: ABCA2 (ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]) HSP 1 Score: 193.356 bits (490), Expect = 6.129e-56 Identity = 99/205 (48.29%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R T + + VK +++ + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2167 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-------TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2363 HSP 2 Score: 100.138 bits (248), Expect = 1.566e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY 396 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y Sbjct: 1107 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGY 1216
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Human
Match: ABCA2 (ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]) HSP 1 Score: 193.356 bits (490), Expect = 6.129e-56 Identity = 99/205 (48.29%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R T + + VK +++ + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2168 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-------TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2364 HSP 2 Score: 100.138 bits (248), Expect = 1.551e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY 396 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y Sbjct: 1108 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGY 1217
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Human
Match: ABCA2 (ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]) HSP 1 Score: 193.356 bits (490), Expect = 6.129e-56 Identity = 99/205 (48.29%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R T + + VK +++ + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2168 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-------TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2364 HSP 2 Score: 100.138 bits (248), Expect = 1.581e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY 396 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y Sbjct: 1108 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGY 1217
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Human
Match: ABCA2 (ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]) HSP 1 Score: 193.356 bits (490), Expect = 6.822e-56 Identity = 99/205 (48.29%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R T + + VK +++ + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2198 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-------TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2394 HSP 2 Score: 100.138 bits (248), Expect = 1.741e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY 396 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y Sbjct: 1138 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGY 1247
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Human
Match: ABCA3 (ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]) HSP 1 Score: 191.43 bits (485), Expect = 3.602e-55 Identity = 98/198 (49.49%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR L L PHA KL + SGGNKRKLST IALIG P VIFLDEP++GMD ARR LW+ + + K A+I+TSH+MEECEALC RL+IMV G+ KCLGS QHLKSKFG Y ++ ++ S E + E+ K + F V L DE+ + Y + + K+F E+ K + DYS+SQ++LE VF++ A Sbjct: 1441 LRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGK-AIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKVQS-EGQQEALEEFKAFVDLTFPGSV-LEDEHQGMVHYHLPGRDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1635 HSP 2 Score: 107.071 bits (266), Expect = 6.052e-26 Identity = 64/183 (34.97%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 109 LSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LSGG +RKLS IALI KV+ LDEPTSGMDA +RR +W+++Q+ ++ I +LT+H M+E + L R++IM GE++C GS LK K+G Y++ + + N E + +++ + + +L A L + S R LF E+ + I + S T+E+VF+ + Sbjct: 607 LSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQRQKSDRTI--VLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLV----KEPHCNPEDISQLVHH-HVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASFGASITTMEEVFLRVG 782
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Celegans
Match: abt-4 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q9TXV8]) HSP 1 Score: 155.221 bits (391), Expect = 4.519e-43 Identity = 80/190 (42.11%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 85 HATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +A++ + SGGNKR+LS IA++G P V+ LDEPTSG+D ARR +WN++ ++ + A++LTSH+M+ECEALC L+IMV G+ +C GS QH+KS++G Y + IRL + N+ EK K I++ F V +++E+ L + + +LFE E + + DYS+SQ TLE VFI + Sbjct: 1573 YASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLRDLGT-ALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKN----RNDAEKTKSTIKQTFRGSV-IKEEHVLQLNFDIPRDGDSWSRLFEKLETVSTSLNWDDYSLSQTTLEQVFIEFS 1756 HSP 2 Score: 117.472 bits (293), Expect = 5.606e-30 Identity = 74/203 (36.45%), Postives = 112/203 (55.17%), Query Frame = 1 Query: 49 CRHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIR-IF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 R L L + A + LSGG KRKLS AIALIG +V+ LDEPTSGMD GAR W +IQ+ + + ++LT+H MEE + L R++IM +G+++C GS LK ++GD Y++ I + T + K II+E ++ + + Y + R IF KLF+ E + I + +S T+E+VF+ + Sbjct: 709 AREILARLRIDFKADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHETWTLIQR--EKERRTILLTTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQQYGDGYHLTIVYDT--TSTPDVSKTTDIIRE-YIPEAHVFSYIGQEATYLLSATHRPIFPKLFKELEDHQTQCGITSFGVSITTMEEVFLKVG 906
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Celegans
Match: abt-2 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q1RS86]) HSP 1 Score: 150.984 bits (380), Expect = 1.516e-41 Identity = 82/203 (40.39%), Postives = 126/203 (62.07%), Query Frame = 1 Query: 70 LSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF---------KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 L L P+A T +LSGGN+RKLS A+AL+ P +IFLDEP++GMD G+++FLW VI+++ K AV+LTSH+MEECEALC R++IM G ++CLG QHLKSK+G + +++ E N +++ I++ L D S ++ CS I I ++ E Q+K + D++++Q TL++VF ++A Sbjct: 1924 LHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKSGK-AVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGKGSMLTMKMGKDE----NAKEIAGIMRSK-LGDGS-------RVEAIHCSTIFIHIEQGTASVARVLEIVNQVKKMYDVDDFTLTQSTLDNVFQSIA 2113 HSP 2 Score: 80.4925 bits (197), Expect = 3.534e-17 Identity = 37/90 (41.11%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIM 330 L ++SLT A KL LSGG KR+L IA IG + + LDEPT+G+D AR+ +W ++Q+ N+ ++L++H+M+E + L R++I+ Sbjct: 1045 LASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQR--NKEGRTILLSTHHMDEADVLSDRIAIL 1132
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Celegans
Match: abt-2 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q1RS86]) HSP 1 Score: 150.984 bits (380), Expect = 1.620e-41 Identity = 81/203 (39.90%), Postives = 126/203 (62.07%), Query Frame = 1 Query: 70 LSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKI---------RIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 L L P+A T +LSGGN+RKLS A+AL+ P +IFLDEP++GMD G+++FLW VI+++ K AV+LTSH+MEECEALC R++IM G ++CLG QHLKSK+G + +++ E N +++ I++ L D S ++ CS I + ++ E Q+K + D++++Q TL++VF ++A Sbjct: 1887 LHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVIERLCKSGK-AVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGKGSMLTMKMGKDE----NAKEIAGIMRSK-LGDGS-------RVEAIHCSTIFIHIEQGTASVARVLEIVNQVKKMYDVDDFTLTQSTLDNVFQSIA 2076 HSP 2 Score: 80.4925 bits (197), Expect = 3.430e-17 Identity = 37/90 (41.11%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIM 330 L ++SLT A KL LSGG KR+L IA IG + + LDEPT+G+D AR+ +W ++Q+ N+ ++L++H+M+E + L R++I+ Sbjct: 1008 LASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQR--NKEGRTILLSTHHMDEADVLSDRIAIL 1095
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Celegans
Match: abt-5 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:Q9XW49]) HSP 1 Score: 129.798 bits (325), Expect = 3.543e-34 Identity = 82/226 (36.28%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 43 ISCRHKLRNLS--------------------LTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKA---TKTILDYSISQMTLEDVFINL 648 ISCR LR ++ ++ KL +N SGG KRK+S IAL+ I LDEPT+G+D ARR +W++I +M + K +++LTSH+MEECEALC R+ I+ GEM LG+ Q LKS++G+ Y + + L+S E + E V I+ E V E+ T + K + K E + Q++ DY ++Q +LED FI L Sbjct: 1332 ISCRQTLRIMAKLQGYPNVKEVVELVLDCVGMSDFGYKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAKCSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTLILNSLE----DLESVCVIVSEEMPDAVLKTPESSLTTSIVWELPKSKSDKWSEKYNQVEVLAKKANAKDYMLTQASLEDTFIRL 1553 HSP 2 Score: 86.2705 bits (212), Expect = 3.328e-19 Identity = 46/109 (42.20%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFG 387 L+ + LT L +NLSGG KRKL +A+IG +VI LDEPT+GMD AR + N++ + + I +LT+H M+E E L + +M +G+M GS +LK K+G Sbjct: 568 LKQIELTDKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALVKADRTI--LLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYG 674
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Celegans
Match: abt-6 (ABC Transporter family [Source:UniProtKB/TrEMBL;Acc:O01842]) HSP 1 Score: 117.857 bits (294), Expect = 4.068e-32 Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = 1 Query: 43 ISCRHKLR-NLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETN 438 ISCR LR N GG KRK+S IAL+ I LDEPT+G+D ARR +W++I +M + K +++LTSH+MEECEALC R+ I+ GEM LG+ Q LKS++G+ Y + + L+S E T+ Sbjct: 70 ISCRQTLRVN--------------DGGQKRKISVGIALMSRASCIILDEPTAGIDPRARREIWDIIHEMREQGKCSIVLTSHSMEECEALCTRIGILHRGEMIALGTSQSLKSQYGNTYMMTLVLNSLEGLTS 188
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332488) HSP 1 Score: 162.925 bits (411), Expect = 1.290e-45 Identity = 89/221 (40.27%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 64 RNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI------------RLHSGEAETNNHE------------KVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++ H K T SGGNKRKLSTAIA+IG+P VI+LDEPT+GMD ARR LWN++ ++ + K +++LTSH+MEECEALC RL+IMVNGE KC+GS QHLK+KF +KI RL G A + + VK+ ++ + + + L++E L + + ++ ++F E + + DYS+SQ TLE++F+ A Sbjct: 1463 KSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGK-SIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSI-LQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1681 HSP 2 Score: 100.138 bits (248), Expect = 7.560e-24 Identity = 67/204 (32.84%), Postives = 111/204 (54.41%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIA--VILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTIL---DYSISQMTLEDVFINLASK 657 L+ + L A + LSGG KRKLS AL G+ KV+ DEP+SGMD ARR LW+++Q + K+ ++LT+H M+E + L R++IM +GE+KC G+ LK ++G Y + I + + ETN +V ++ + ++ + + A L YQ K E F Q++ L Y + ++E+VF+ + ++ Sbjct: 631 LKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQ----QEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRL-ICVKRDDCETN---EVTALLNK-YIPGLKPECDIGAELSYQLPDSASA-KFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAE 824
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0332489) HSP 1 Score: 162.925 bits (411), Expect = 1.301e-45 Identity = 89/221 (40.27%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 64 RNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI------------RLHSGEAETNNHE------------KVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++ H K T SGGNKRKLSTAIA+IG+P VI+LDEPT+GMD ARR LWN++ ++ + K +++LTSH+MEECEALC RL+IMVNGE KC+GS QHLK+KF +KI RL G A + + VK+ ++ + + + L++E L + + ++ ++F E + + DYS+SQ TLE++F+ A Sbjct: 1463 KSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGK-SIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSI-LQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1681 HSP 2 Score: 100.138 bits (248), Expect = 8.390e-24 Identity = 67/204 (32.84%), Postives = 111/204 (54.41%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIA--VILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTIL---DYSISQMTLEDVFINLASK 657 L+ + L A + LSGG KRKLS AL G+ KV+ DEP+SGMD ARR LW+++Q + K+ ++LT+H M+E + L R++IM +GE+KC G+ LK ++G Y + I + + ETN +V ++ + ++ + + A L YQ K E F Q++ L Y + ++E+VF+ + ++ Sbjct: 631 LKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQ----QEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRL-ICVKRDDCETN---EVTALLNK-YIPGLKPECDIGAELSYQLPDSASA-KFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAE 824
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Fly
Match: ABCA (gene:FBgn0031170 transcript:FBtr0306679) HSP 1 Score: 162.925 bits (411), Expect = 1.328e-45 Identity = 89/221 (40.27%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 64 RNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI------------RLHSGEAETNNHE------------KVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++ H K T SGGNKRKLSTAIA+IG+P VI+LDEPT+GMD ARR LWN++ ++ + K +++LTSH+MEECEALC RL+IMVNGE KC+GS QHLK+KF +KI RL G A + + VK+ ++ + + + L++E L + + ++ ++F E + + DYS+SQ TLE++F+ A Sbjct: 1485 KSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGK-SIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSI-LQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFA 1703 HSP 2 Score: 99.7525 bits (247), Expect = 9.069e-24 Identity = 67/204 (32.84%), Postives = 111/204 (54.41%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIA--VILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTIL---DYSISQMTLEDVFINLASK 657 L+ + L A + LSGG KRKLS AL G+ KV+ DEP+SGMD ARR LW+++Q + K+ ++LT+H M+E + L R++IM +GE+KC G+ LK ++G Y + I + + ETN +V ++ + ++ + + A L YQ K E F Q++ L Y + ++E+VF+ + ++ Sbjct: 653 LKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQ----QEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRL-ICVKRDDCETN---EVTALLNK-YIPGLKPECDIGAELSYQLPDSASA-KFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAE 846
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Fly
Match: CG6052 (gene:FBgn0036747 transcript:FBtr0075195) HSP 1 Score: 145.591 bits (366), Expect = 1.507e-39 Identity = 84/226 (37.17%), Postives = 123/226 (54.42%), Query Frame = 1 Query: 85 HATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFG-----------------------------------DDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 H K T++ SGGN+RKLSTAI+++GNP V++LDEPTSGMD ARR LW +I + K +++LTSH+M+ECEALC RL+IMV+GE KCLGSVQ LK++F D ++++ ++ + KV + I + + D L++E + Y + K+F+ E I DY I Q LE++F++ ASK Sbjct: 1457 HMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGK-SIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVEDSSSSNDKKSISETDLKFLQMASVMESSQADRILKVNRFISKE-IPDAELKEEYNGLITYYIPHSKTLSKIFQLLETNSHKLNIEDYLIMQTRLEEIFLDFASK 1680 HSP 2 Score: 104.76 bits (260), Expect = 1.760e-25 Identity = 62/180 (34.44%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 103 QNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFI 642 +NLSGG KRKLS AL GN KV+ DEP+SG+DA RR LW+++Q + ++ ++LT+H M+E + L R++I+ G+++C G+ +LK +FG Y + + SG + ++K + V L E L ++ K +L + ++ A ++ Y +S TLEDVF+ Sbjct: 645 KNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQ--SEKDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLVCIMQSGCDVGAVTQLIRKYVPPIKPERV-LGTELTYRLPTEYSKKFA--ELLQDLDEKCAQLQLVGYGLSGATLEDVFM 819
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Fly
Match: Eato (gene:FBgn0028539 transcript:FBtr0110941) HSP 1 Score: 128.257 bits (321), Expect = 1.298e-33 Identity = 69/203 (33.99%), Postives = 120/203 (59.11%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSK------IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFI 642 ++ L + LT + ++ SGG KRKL A+A+IG P ++ LDEPT+G+D +RRFLW I+ +++ V+LTSH+M+ECE LC+RL+IM +G+ KCL ++ LK G + +K+++ + N + ++ F + LR+ + TL Y ++ +FK+ E + + + + DYS+++ TLED+F+ Sbjct: 1373 KYWLEKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKDFQGKDR-TVVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKRLSG--FTIKLKMKADTETEMNVSTITGTLKSEF-PGLELRESHAGTLTYFVSTQESVVLWSSVFKIAEEYLGDRLSALVADYSVNECTLEDIFL 1571 HSP 2 Score: 104.375 bits (259), Expect = 2.421e-25 Identity = 67/203 (33.00%), Postives = 111/203 (54.68%), Query Frame = 1 Query: 58 KLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEA-ETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF--CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 KL+ L L+ + +NLSGG KR+LS IA+ GN K++ LDEP+SG+D +RR LW+++ + E AV++T+H MEE E L + I+ NG+++ +GS LK K G Y +K+ ++ + E E + + A + +V + + L Y + C +++L E I S++ +LEDVF+ A + Sbjct: 576 KLKKLGLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLRKEK--AVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLEINDFTSREVEIMEIIHHFVPTARVLNV-VNPTVYICLPYAYKNCFAQMLYRL----ETESKELGIHTISMTDTSLEDVFLRCAGE 771
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Zebrafish
Match: abca3b (ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]) HSP 1 Score: 191.045 bits (484), Expect = 2.480e-55 Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYV--KIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR+L L PHA KL ++ SGGNKRKLS +ALIG P VIFLDEP++GMD ARR LW+ I + T E+ A+I+TSH+MEECEALC RL++MVNG+ KCLGS QHLKSKFG Y + K+R+ + E E ++ + K I+ F + L+DE+ + Y K + ++F E K +I DY +SQ++LE VF++ A Sbjct: 919 LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAITR-TRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVET-ELEESDLQLFKDFIESTFPGSL-LKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYSIEDYCVSQISLEQVFLSFA 1115 HSP 2 Score: 87.4261 bits (215), Expect = 2.278e-19 Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMK 348 +R L+L + LSGG KRKLS IALIG+ KV+ LDEPTSGMD ARR W+++Q + ++LT+H M+E + L R++IM +GE++ Sbjct: 133 IRILNLEDKRNAKCKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQG--EKRGRTILLTTHFMDEADLLGDRIAIMASGELQ 226
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Zebrafish
Match: abca3b (ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]) HSP 1 Score: 190.274 bits (482), Expect = 4.622e-55 Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYV--KIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR+L L PHA KL ++ SGGNKRKLS +ALIG P VIFLDEP++GMD ARR LW+ I + T E+ A+I+TSH+MEECEALC RL++MVNG+ KCLGS QHLKSKFG Y + K+R+ + E E ++ + K I+ F + L+DE+ + Y K + ++F E K +I DY +SQ++LE VF++ A Sbjct: 1547 LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAITR-TRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVET-ELEESDLQLFKDFIESTFPGSL-LKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYSIEDYCVSQISLEQVFLSFA 1743 HSP 2 Score: 112.849 bits (281), Expect = 3.506e-28 Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L+L + LSGG KRKLS IALIG+ KV+ LDEPTSGMD ARR W+++Q + ++LT+H M+E + L R++IM +GE++C GS LK+K+G Y++ I +A N E + + ++ D +L A L Y S R LF E + I Y S T+E+VF+ + Sbjct: 698 IRILNLEDKRNAKCKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQG--EKRGRTILLTTHFMDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAGYHMVI---VKDAFCNVSEITRLV--HMYVPDATLESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVG 889
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Zebrafish
Match: abca3b (ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]) HSP 1 Score: 190.274 bits (482), Expect = 4.931e-55 Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYV--KIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR+L L PHA KL ++ SGGNKRKLS +ALIG P VIFLDEP++GMD ARR LW+ I + T E+ A+I+TSH+MEECEALC RL++MVNG+ KCLGS QHLKSKFG Y + K+R+ + E E ++ + K I+ F + L+DE+ + Y K + ++F E K +I DY +SQ++LE VF++ A Sbjct: 1496 LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAITR-TRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVET-ELEESDLQLFKDFIESTFPGSL-LKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYSIEDYCVSQISLEQVFLSFA 1692 HSP 2 Score: 112.849 bits (281), Expect = 3.702e-28 Identity = 70/185 (37.84%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 103 QNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 + LSGG KRKLS IALIG+ KV+ LDEPTSGMD ARR W+++Q + ++LT+H M+E + L R++IM +GE++C GS LK+K+G Y++ I +A N E + + ++ D +L A L Y S R LF E + I Y S T+E+VF+ + Sbjct: 661 KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQG--EKRGRTILLTTHFMDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAGYHMVI---VKDAFCNVSEITRLV--HMYVPDATLESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVG 838
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Zebrafish
Match: abca2 (ATP-binding cassette, sub-family A (ABC1), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-1]) HSP 1 Score: 189.889 bits (481), Expect = 6.723e-55 Identity = 100/202 (49.50%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 L L L+ +A K SGGNKRKLSTAIALIG P +IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL IMVNG KCLGS+QHLK++FGD Y + +R T VK++I+ + L++ + +QYQ S+ I + ++F EQ+ +I DYS+SQ TL++VF+N A K Sbjct: 2152 LEKLELSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGR-SVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVR-------TKTTASVKEVIRFFNRNFPEAILKERHHTKIQYQLKSENISLAQVFSKMEQVVEVLSIEDYSVSQTTLDNVFVNFAKK 2345 HSP 2 Score: 107.842 bits (268), Expect = 2.057e-26 Identity = 69/217 (31.80%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNN--------------HEKVKKIIQEAFLSDVSLRDENFATLQYQFCS---KIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + + LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LKS +GD Y + + ++ T + +V + I++ S + + D N L Y S K F +LF+ EQ + + + + TLE+VF+ ++ + Sbjct: 1073 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSDSHTADQSSQSPSSSISPCSENRVTQFIRQYVASCLLVSDSN-TELSYVLPSEAVKKGCFERLFQALEQSLDSLALTSFGVMDTTLEEVFLKVSEE 1286
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Zebrafish
Match: abca1a (ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]) HSP 1 Score: 182.956 bits (463), Expect = 1.738e-52 Identity = 95/198 (47.98%), Postives = 129/198 (65.15%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKI-RIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L + K + SGGN RKLSTA+ALIG P V+FLDEPT+GMD ARR LWN I + E + +V+LTSH+MEECEALC R++IMVNG +CLGSVQHLK+KFGD Y + +R+ + E V + I+ L +L++++ LQYQ S + + ++F + K I DYS+SQ TL+ VF+N A Sbjct: 2036 IRKLGLMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVAGADPRL---EPVMEFIERE-LPGSTLKEKHRNMLQYQLSSSLTSLARIFNILSKNKEQLHIEDYSVSQTTLDQVFVNFA 2228 HSP 2 Score: 95.1301 bits (235), Expect = 4.655e-22 Identity = 46/114 (40.35%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 67 NLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 +L L T + LSGG +RKLS A+A +G KV+ LDEPT+G+D ARR +W+++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + Sbjct: 1022 DLGLPHKRTSRSNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTL 1133
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 191.43 bits (485), Expect = 3.287e-55 Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L ++ K N SGGNKRKLSTAIALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG KCLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ + LQYQ S+ + ++F + K I DYS+SQ TL+ VF+N A Sbjct: 1948 IRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPDL---KPVEEFFSHAFPGSV-LKEKHRSMLQYQLRSSQSSLARIFSILSKNKKRLHIEDYSVSQTTLDQVFVNFA 2140 HSP 2 Score: 93.9745 bits (232), Expect = 1.734e-21 Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 82 PHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 PH K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + Sbjct: 963 PHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1070
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 191.045 bits (484), Expect = 3.432e-55 Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L ++ K N SGGNKRKLSTAIALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG KCLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ + LQYQ S+ + ++F + K I DYS+SQ TL+ VF+N A Sbjct: 2080 IRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPDL---KPVEEFFSHAFPGSV-LKEKHRSMLQYQLRSSQSSLARIFSILSKNKKRLHIEDYSVSQTTLDQVFVNFA 2272 HSP 2 Score: 93.9745 bits (232), Expect = 1.809e-21 Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 82 PHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 PH K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + Sbjct: 1026 PHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1133
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 191.045 bits (484), Expect = 3.454e-55 Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L ++ K N SGGNKRKLSTAIALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG KCLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ + LQYQ S+ + ++F + K I DYS+SQ TL+ VF+N A Sbjct: 1980 IRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPDL---KPVEEFFSHAFPGSV-LKEKHRSMLQYQLRSSQSSLARIFSILSKNKKRLHIEDYSVSQTTLDQVFVNFA 2172 HSP 2 Score: 94.3597 bits (233), Expect = 1.608e-21 Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 82 PHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 PH K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + Sbjct: 1013 PHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1120
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 191.045 bits (484), Expect = 3.700e-55 Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L ++ K N SGGNKRKLSTAIALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG KCLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ + LQYQ S+ + ++F + K I DYS+SQ TL+ VF+N A Sbjct: 2016 IRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPDL---KPVEEFFSHAFPGSV-LKEKHRSMLQYQLRSSQSSLARIFSILSKNKKRLHIEDYSVSQTTLDQVFVNFA 2208 HSP 2 Score: 93.9745 bits (232), Expect = 1.641e-21 Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 82 PHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 PH K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + Sbjct: 1022 PHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1129
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Xenopus
Match: ABCA1 (ATP binding cassette subfamily A member 1 [Source:NCBI gene;Acc:100491942]) HSP 1 Score: 191.045 bits (484), Expect = 3.997e-55 Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L ++ K N SGGNKRKLSTAIALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG KCLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ + LQYQ S+ + ++F + K I DYS+SQ TL+ VF+N A Sbjct: 2015 IRKLGLVKYSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIIVRIAGSNPDL---KPVEEFFSHAFPGSV-LKEKHRSMLQYQLRSSQSSLARIFSILSKNKKRLHIEDYSVSQTTLDQVFVNFA 2207 HSP 2 Score: 93.9745 bits (232), Expect = 1.788e-21 Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 82 PHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 PH K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + Sbjct: 1024 PHKKKYKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLIKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1131
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Mouse
Match: Abca2 (ATP-binding cassette, sub-family A (ABC1), member 2 [Source:MGI Symbol;Acc:MGI:99606]) HSP 1 Score: 193.356 bits (490), Expect = 4.910e-56 Identity = 100/203 (49.26%), Postives = 134/203 (66.01%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R S + N + V + F + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2167 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS----SQNVKDVVRFFNRNF-PEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKK 2363 HSP 2 Score: 102.834 bits (255), Expect = 1.388e-24 Identity = 68/221 (30.77%), Postives = 114/221 (51.58%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETN------------------NHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFE-FFEQMKATKTIL---DYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y + + E T+ + +V + I++ S + + D + L Y S+ FE F+Q++ + L + + TLE+VF+ ++ + Sbjct: 1106 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKQPAEPGTSQEPGLASSPSGCPRLSSCSEPQVSQFIRKHVASSLLVSDTS-TELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKVSEE 1323
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Mouse
Match: Abca1 (ATP-binding cassette, sub-family A (ABC1), member 1 [Source:MGI Symbol;Acc:MGI:99607]) HSP 1 Score: 191.43 bits (485), Expect = 2.181e-55 Identity = 97/198 (48.99%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKI-RIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L + K N SGGNKRKLSTA+ALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG +CLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ LQYQ S + + ++F Q K I DYS+SQ TL+ VF+N A Sbjct: 2029 IRKLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDL---KPVQEFFGLAFPGSV-LKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFA 2221 HSP 2 Score: 93.2041 bits (230), Expect = 2.991e-21 Identity = 67/240 (27.92%), Postives = 114/240 (47.50%), Query Frame = 1 Query: 67 NLSLTPHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI-----------------------------RLHSGEAETNNHEK-------------VKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 ++ L P K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + + S ++HE ++K + EA L + + E L Y+ + +LF + + I Y IS+ TLE++F+ +A + Sbjct: 1018 DVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVE-DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE 1254
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Mouse
Match: Abca3 (ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]) HSP 1 Score: 186.808 bits (473), Expect = 8.024e-54 Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR L L PHA KL + SGGNKRKLST IALIG P VIFLDEP++GMD ARR LW+ + + K A+++TSH+MEECEALC RL+IMV G+ KCLGS QHLKSKFG Y ++ ++ S E + + E+ K + F + L DE+ + Y + K+F E+ K + DYS+SQ++LE VF++ A Sbjct: 1244 LRGLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGK-AIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRS-EGKQDALEEFKAFVDLTFPGSI-LEDEHQDMVHYHLPGCDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1438 HSP 2 Score: 104.375 bits (259), Expect = 3.530e-25 Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 109 LSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFI 642 LSGG KRKLS IALI KV+ LDEPTSGMDA +RR +W+++Q+ ++ V+LT+H M+E + L R++I+ GE++C GS LK K+G Y++ + + N E + +++ + + L A L + S R LF E+ + I + S T+E+VF+ Sbjct: 665 LSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQQKSDR--TVLLTTHFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLV----KEPHCNPEGISQLVHHH-VPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFL 837
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Mouse
Match: Abca3 (ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]) HSP 1 Score: 186.808 bits (473), Expect = 8.094e-54 Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR L L PHA KL + SGGNKRKLST IALIG P VIFLDEP++GMD ARR LW+ + + K A+++TSH+MEECEALC RL+IMV G+ KCLGS QHLKSKFG Y ++ ++ S E + + E+ K + F + L DE+ + Y + K+F E+ K + DYS+SQ++LE VF++ A Sbjct: 1499 LRGLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGK-AIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRS-EGKQDALEEFKAFVDLTFPGSI-LEDEHQDMVHYHLPGCDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693 HSP 2 Score: 104.76 bits (260), Expect = 2.382e-25 Identity = 64/183 (34.97%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 109 LSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LSGG KRKLS IALI KV+ LDEPTSGMDA +RR +W+++Q+ ++ V+LT+H M+E + L R++I+ GE++C GS LK K+G Y++ + + N E + +++ + + L A L + S R LF E+ + I + S T+E+VF+ + Sbjct: 665 LSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQQKSDR--TVLLTTHFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLV----KEPHCNPEGISQLVHH-HVPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG 840
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Mouse
Match: Abca3 (ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]) HSP 1 Score: 186.808 bits (473), Expect = 8.094e-54 Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR L L PHA KL + SGGNKRKLST IALIG P VIFLDEP++GMD ARR LW+ + + K A+++TSH+MEECEALC RL+IMV G+ KCLGS QHLKSKFG Y ++ ++ S E + + E+ K + F + L DE+ + Y + K+F E+ K + DYS+SQ++LE VF++ A Sbjct: 1499 LRGLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGK-AIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRS-EGKQDALEEFKAFVDLTFPGSI-LEDEHQDMVHYHLPGCDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693 HSP 2 Score: 104.76 bits (260), Expect = 2.382e-25 Identity = 64/183 (34.97%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 109 LSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LSGG KRKLS IALI KV+ LDEPTSGMDA +RR +W+++Q+ ++ V+LT+H M+E + L R++I+ GE++C GS LK K+G Y++ + + N E + +++ + + L A L + S R LF E+ + I + S T+E+VF+ + Sbjct: 665 LSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQQKSDR--TVLLTTHFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLV----KEPHCNPEGISQLVHH-HVPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG 840
BLAST of ATP-binding cassette sub-family A member 1 vs. UniProt/SwissProt
Match: sp|Q9BZC7|ABCA2_HUMAN (ATP-binding cassette sub-family A member 2 OS=Homo sapiens OX=9606 GN=ABCA2 PE=1 SV=4) HSP 1 Score: 193.356 bits (490), Expect = 2.943e-55 Identity = 99/205 (48.29%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R T + + VK +++ + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2167 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-------TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2363 HSP 2 Score: 100.138 bits (248), Expect = 7.518e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY 396 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y Sbjct: 1107 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGY 1216
BLAST of ATP-binding cassette sub-family A member 1 vs. UniProt/SwissProt
Match: sp|P41234|ABCA2_MOUSE (ATP-binding cassette sub-family A member 2 OS=Mus musculus OX=10090 GN=Abca2 PE=1 SV=4) HSP 1 Score: 193.356 bits (490), Expect = 3.502e-55 Identity = 100/203 (49.26%), Postives = 134/203 (66.01%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + L L LT +A K SGGNKRKLSTAIALIG P IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG ++CLGS+QHLK++FGD Y + +R S + N + V + F + L++ + +QYQ S+ I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2168 KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS----SQNVKDVVRFFNRNF-PEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKK 2364 HSP 2 Score: 102.834 bits (255), Expect = 9.712e-24 Identity = 68/221 (30.77%), Postives = 114/221 (51.58%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETN------------------NHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFE-FFEQMKATKTIL---DYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + I LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LK +GD Y + + E T+ + +V + I++ S + + D + L Y S+ FE F+Q++ + L + + TLE+VF+ ++ + Sbjct: 1107 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKQPAEPGTSQEPGLASSPSGCPRLSSCSEPQVSQFIRKHVASSLLVSDTS-TELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKVSEE 1324
BLAST of ATP-binding cassette sub-family A member 1 vs. UniProt/SwissProt
Match: sp|P41233|ABCA1_MOUSE (Phospholipid-transporting ATPase ABCA1 OS=Mus musculus OX=10090 GN=Abca1 PE=1 SV=4) HSP 1 Score: 191.43 bits (485), Expect = 1.526e-54 Identity = 97/198 (48.99%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKI-RIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L + K N SGGNKRKLSTA+ALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG +CLGSVQHLK++FGD Y + +R+ + + V++ AF V L++++ LQYQ S + + ++F Q K I DYS+SQ TL+ VF+N A Sbjct: 2029 IRKLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDL---KPVQEFFGLAFPGSV-LKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFA 2221 HSP 2 Score: 93.2041 bits (230), Expect = 2.092e-20 Identity = 67/240 (27.92%), Postives = 114/240 (47.50%), Query Frame = 1 Query: 67 NLSLTPHATKL-TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI-----------------------------RLHSGEAETNNHEK-------------VKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 ++ L P K T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + + S ++HE ++K + EA L + + E L Y+ + +LF + + I Y IS+ TLE++F+ +A + Sbjct: 1018 DVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTI--ILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVE-DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE 1254
BLAST of ATP-binding cassette sub-family A member 1 vs. UniProt/SwissProt
Match: sp|Q99758|ABCA3_HUMAN (ATP-binding cassette sub-family A member 3 OS=Homo sapiens OX=9606 GN=ABCA3 PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 2.026e-54 Identity = 98/198 (49.49%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR L L PHA KL + SGGNKRKLST IALIG P VIFLDEP++GMD ARR LW+ + + K A+I+TSH+MEECEALC RL+IMV G+ KCLGS QHLKSKFG Y ++ ++ S E + E+ K + F V L DE+ + Y + + K+F E+ K + DYS+SQ++LE VF++ A Sbjct: 1499 LRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGK-AIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKVQS-EGQQEALEEFKAFVDLTFPGSV-LEDEHQGMVHYHLPGRDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693 HSP 2 Score: 107.071 bits (266), Expect = 3.400e-25 Identity = 64/183 (34.97%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 109 LSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LSGG +RKLS IALI KV+ LDEPTSGMDA +RR +W+++Q+ ++ I +LT+H M+E + L R++IM GE++C GS LK K+G Y++ + + N E + +++ + + +L A L + S R LF E+ + I + S T+E+VF+ + Sbjct: 665 LSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQRQKSDRTI--VLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLV----KEPHCNPEDISQLVHH-HVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASFGASITTMEEVFLRVG 840
BLAST of ATP-binding cassette sub-family A member 1 vs. UniProt/SwissProt
Match: sp|O95477|ABCA1_HUMAN (Phospholipid-transporting ATPase ABCA1 OS=Homo sapiens OX=9606 GN=ABCA1 PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 2.885e-54 Identity = 97/198 (48.99%), Postives = 129/198 (65.15%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKI-RIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L + K N SGGNKRKLSTA+ALIG P V+FLDEPT+GMD ARRFLWN + E + +V+LTSH+MEECEALC R++IMVNG +CLGSVQHLK++FGD Y + +R+ + + V+ AF V L++++ LQYQ S + + ++F Q K I DYS+SQ TL+ VF+N A Sbjct: 2029 IRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDL---KPVQDFFGLAFPGSV-LKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFA 2221 HSP 2 Score: 93.2041 bits (230), Expect = 1.729e-20 Identity = 64/228 (28.07%), Postives = 109/228 (47.81%), Query Frame = 1 Query: 100 TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI-----------------------------RLHSGEAETNNHEK-------------VKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 T LSGG +RKLS A+A +G KV+ LDEPT+G+D +RR +W ++ K I IL++H+M+E + L R++I+ +G++ C+GS LK++ G YY+ + + S ++HE ++K + EA L + + E L Y+ + +LF + + I Y IS+ TLE++F+ +A + Sbjct: 1030 TSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTI--ILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVE-DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE 1254
BLAST of ATP-binding cassette sub-family A member 1 vs. TrEMBL
Match: A0A087T022 (ATP-binding cassette sub-family A member 1 (Fragment) OS=Stegodyphus mimosarum OX=407821 GN=X975_05296 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.817e-61 Identity = 98/197 (49.75%), Postives = 138/197 (70.05%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L PH + SGGNKRKLSTAIALIGNP V+FLDEPT+GMD ARRFLWN I + E + +VILTSH+MEECEALC RL+IMVNG+ +CLGS+QHLK+K+G+ Y + +R+ + E + ++V+K I+ F + SL++++ ++YQ + + +F+ E+ + I DYS+SQ TL+ VFI+ A Sbjct: 116 IRKLGLLPHGHRCAGTYSGGNKRKLSTAIALIGNPSVVFLDEPTTGMDPKARRFLWNCIIDIVKEGR-SVILTSHSMEECEALCTRLAIMVNGQFRCLGSIQHLKNKYGNGYTLTVRVAN---EPSAMQEVQKFIETTFGNAASLQEQHLNQMEYQLAPSLSLAVVFQELEKARQLLRIEDYSVSQTTLDQVFISFA 308
BLAST of ATP-binding cassette sub-family A member 1 vs. TrEMBL
Match: A0A2L2YS93 (ATP-binding cassette sub-family A member 1 (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.235e-59 Identity = 95/197 (48.22%), Postives = 135/197 (68.53%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L H + SGGNKRKLSTAIAL+GNP V+FLDEPT+GMD ARRFLWN I + E + +VILTSH+MEECEALC RL+IMVNG+ +CLGS+QHLK+K+G Y + +R+ + E+V++ ++ F S SL++++ ++YQ + + +F+ E+ + +I DYS+SQ TL+ VFI+ A Sbjct: 116 IRKLGLLAHGHRCAGTYSGGNKRKLSTAIALVGNPSVVFLDEPTTGMDPKARRFLWNCIIDIVKEGR-SVILTSHSMEECEALCTRLAIMVNGQFRCLGSIQHLKNKYGHGYTLTLRVTN---SLTAMEEVRRFMENTFGSAASLQEQHLNQMEYQLAPSLSLAMVFQELERARQMLSIEDYSVSQTTLDQVFISFA 308
BLAST of ATP-binding cassette sub-family A member 1 vs. TrEMBL
Match: A0A0B6ZKX4 (ABC transporter domain-containing protein (Fragment) OS=Arion vulgaris OX=1028688 GN=ORF69697 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.622e-59 Identity = 102/200 (51.00%), Postives = 137/200 (68.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 ++ L L H K++ + SGGNKRKLSTAIALIGNP +IFLDEPT+GMD GARRFLW+ I + +VILTSH+MEECEALC+RL+IMVNG +C+GS+QHLKS+FG+ Y + +R+ S + N V + I +F S L++++ LQYQ S + + KLF+ E+ K + DYS SQ TL+ VFI+ A K Sbjct: 119 IKRLGLAQHGDKISSSYSGGNKRKLSTAIALIGNPPIIFLDEPTTGMDPGARRFLWDCINSIVKAGH-SVILTSHSMEECEALCNRLAIMVNGTFQCIGSIQHLKSRFGNGYTIVLRVKSESLDIN---PVMEFISSSFPS-AKLKEKHHNMLQYQLGSVGLSLSKLFQAMEEAKRVYNVEDYSASQTTLDQVFISFAKK 313
BLAST of ATP-binding cassette sub-family A member 1 vs. TrEMBL
Match: A0A210PGD8 (ATP-binding cassette sub-family A member 1 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT08408 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.614e-58 Identity = 101/194 (52.06%), Postives = 134/194 (69.07%), Query Frame = 1 Query: 70 LSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 L LT +A K + SGGN+RKLSTAIALIGNP VIFLDEPT+GMD GARRFLWN I + + + +VILTSH+MEECEALC RL+IMVNG + +GS+QHLK++FG+ Y V +R+ + + + V I E F S +LR+ + LQYQ S++ + +F E ++ + I DYS+SQ TL+ VFIN A Sbjct: 181 LGLTQYADKPSGTYSGGNRRKLSTAIALIGNPSVIFLDEPTAGMDPGARRFLWNCINNIVKDGR-SVILTSHSMEECEALCSRLAIMVNGRFRGIGSIQHLKTRFGNGYIVIVRI---AGDRPDLDIVDSFITETFPS-ANLRERHHNMLQYQLGSEVPLSHIFSEIEAVRESFNIEDYSVSQTTLDQVFINFA 369
BLAST of ATP-binding cassette sub-family A member 1 vs. TrEMBL
Match: A0A4Y2IF52 (ATP-binding cassette sub-family A member 1 OS=Araneus ventricosus OX=182803 GN=Abca1_0 PE=4 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.904e-58 Identity = 102/197 (51.78%), Postives = 138/197 (70.05%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L L PH + SGGNKRKLSTAIALIGNP V+FLDEPT+GMD ARRFLWN I + E + +VILTSH+MEECEALC RL+IMVNG+ CLGS+QHLK+K+G+ Y + +R+ + ET EKV++ I+ F S SL++ + ++YQ + + +F+ EQ + + +I DYS+SQ TL+ VFI+ A Sbjct: 722 IRKLGLLPHGHRCAGTYSGGNKRKLSTAIALIGNPSVVFLDEPTTGMDPKARRFLWNCIIDIVKEGR-SVILTSHSMEECEALCTRLAIMVNGQFHCLGSIQHLKNKYGNGYTLTLRV-ANVPET--MEKVQRFIESTFGSSASLQEHHLNQMEYQLAPSLSLAYVFQELEQARDSLSIEDYSVSQTTLDQVFISFA 914
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Cavefish
Match: zgc:172302 (zgc:172302 [Source:ZFIN;Acc:ZDB-GENE-081205-5]) HSP 1 Score: 191.815 bits (486), Expect = 1.223e-55 Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF----CSKIRIFKLFE-FFEQMKATKTILDYSISQMTLEDVFINLA 651 ++ L LT +A + SGGNKRKLSTAI+LIG P VIFLDEPT+GMD A+RFLWN I + E + AVILTSH+MEECEALC R++IMVNG +CLGSVQHLK++FGD Y + +RL A + V I+ +F + + L++ + LQYQ CS R+F + +E++ T DYSISQ TL+ VF+N A Sbjct: 1951 VKKLGLTHYADREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVIKEGR-AVILTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRL---SAPPKDPCPVDAYIKNSF-TGIVLKERHHNVLQYQLPSNSCSLARVFDVLSNNYEELGVT----DYSISQTTLDQVFVNFA 2143 HSP 2 Score: 99.3673 bits (246), Expect = 1.505e-23 Identity = 71/229 (31.00%), Postives = 110/229 (48.03%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYY---VKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDE-------NFATLQYQFCSKIRIFK-------------------LFEFFEQM---KATKTILDYSISQMTLEDVFINLA 651 L ++ LT + T+NLSGG +RKLS AIA IG KV+ LDEPT+G+D +RR +W+++ K + I IL++H M+E + L R++I+ G++ C GS LKS G YY VK L S + + + + D L E L + S R+ + L F ++ +A I+ Y +S TLE++F+ +A Sbjct: 974 LEDVGLTHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVILDEPTAGVDPYSRRGIWDLLLKYRKDRTI--ILSTHYMDEADLLGDRIAIISQGKLCCCGSSLFLKSHLGTGYYLTAVKKELQSRTPTSASGKLLAADTDSTRSDDTGLGSEVNSSVISGLVALAQHYVSGARLVEDVGREVVINLPHAASEDGTLALFLAELDKRQAEFGIISYGLSDTTLEEIFLKVA 1200
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Cavefish
Match: zgc:172302 (zgc:172302 [Source:ZFIN;Acc:ZDB-GENE-081205-5]) HSP 1 Score: 191.43 bits (485), Expect = 1.820e-55 Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF----CSKIRIFKLFE-FFEQMKATKTILDYSISQMTLEDVFINLA 651 ++ L LT +A + SGGNKRKLSTAI+LIG P VIFLDEPT+GMD A+RFLWN I + E + AVILTSH+MEECEALC R++IMVNG +CLGSVQHLK++FGD Y + +RL A + V I+ +F + + L++ + LQYQ CS R+F + +E++ T DYSISQ TL+ VF+N A Sbjct: 1842 VKKLGLTHYADREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVIKEGR-AVILTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRL---SAPPKDPCPVDAYIKNSF-TGIVLKERHHNVLQYQLPSNSCSLARVFDVLSNNYEELGVT----DYSISQTTLDQVFVNFA 2034 HSP 2 Score: 98.9821 bits (245), Expect = 2.340e-23 Identity = 71/231 (30.74%), Postives = 111/231 (48.05%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYY---VKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDE-------NFATLQYQFCSKIRIFK-------------------LFEFFEQM---KATKTILDYSISQMTLEDVFINLASK 657 L ++ LT + T+NLSGG +RKLS AIA IG KV+ LDEPT+G+D +RR +W+++ K + I IL++H M+E + L R++I+ G++ C GS LKS G YY VK L S + + + + D L E L + S R+ + L F ++ +A I+ Y +S TLE++F+ +A + Sbjct: 885 LEDVGLTHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVILDEPTAGVDPYSRRGIWDLLLKYRKDRTI--ILSTHYMDEADLLGDRIAIISQGKLCCCGSSLFLKSHLGTGYYLTAVKKELQSRTPTSASGKLLAADTDSTRSDDTGLGSEVNSSVISGLVALAQHYVSGARLVEDVGREVVINLPHAASEDGTLALFLAELDKRQAEFGIISYGLSDTTLEEIFLKVAEE 1113
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Cavefish
Match: abca2 (ATP-binding cassette, sub-family A (ABC1), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-1]) HSP 1 Score: 190.66 bits (483), Expect = 2.852e-55 Identity = 100/202 (49.50%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQ--EAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 L L L+ +A K SGGNKRKLSTAIALIG P +IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL IMVNG KCLGS+QHLK++FGD Y + +R T VK++I+ + L++ + +QYQ S +I + ++F EQ+ +I DYS+SQ TL++VF+N A K Sbjct: 1942 LEKLELSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGR-SVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVR-------TKTTASVKEVIRFFNRNFPEAILKERHHTKIQYQLKSERISLAQVFSKMEQVVEVLSIEDYSVSQTTLDNVFVNFAKK 2135 HSP 2 Score: 108.997 bits (271), Expect = 6.516e-27 Identity = 71/206 (34.47%), Postives = 113/206 (54.85%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY---YVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS---KIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + + LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS LKS +GD Y VK S + +V + I++ S + + D N L Y S K F +LF+ EQ + + + + TLE+VF+ ++ + Sbjct: 905 IEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKNVAPSSSMSPCSESRVTQFIRQYVASCLLVSDSN-TELSYVLPSEAVKKGCFERLFQALEQSLESLALTSFGVMDTTLEEVFLKVSEE 1107
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Cavefish
Match: abca3b (ATP binding cassette subfamily A member 3 [Source:NCBI gene;Acc:103033960]) HSP 1 Score: 189.889 bits (481), Expect = 6.090e-55 Identity = 96/199 (48.24%), Postives = 134/199 (67.34%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHS-GEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR+L L PHA KL ++ SGGNKRKLS +ALIG P VIFLDEP++GMD ARR LW+ + + T E+ A+++TSH+MEECEALC RL++MVNG+ KCLGS QHLKSKFG Y + ++H+ + E + + K I+ F V L+DE+ + Y K+ + ++F E K +I DY +SQ++LE VF++ A Sbjct: 1498 LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVTR-TRESGKAIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHTEPDLEEMDIQLFKDFIESTFPGSV-LKDEHQGMVHYHLTDKMLTWAQVFGTLEAAKEKYSIEDYCVSQISLEQVFLSFA 1694 HSP 2 Score: 112.464 bits (280), Expect = 4.831e-28 Identity = 73/201 (36.32%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQY----QFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L+L ++ LSGG KRKLS IALIG+ KV+ LDEPTSGMD ARR W+++Q + ++LT+H M+E + L R++IM GE++C GS LK+K+G Y++ I +A N E + + ++ + SL A L Y + SK + LF E + I Y S T+E+VF+ + Sbjct: 646 IRVLNLEDKRNSQSKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQG--EKRGRTILLTTHFMDEADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVI---VKDALCNVSEITRLV--HMYVPNASLESSAGAELSYILPKESTSKFEL--LFAELEMNREELGIASYGASVTTMEEVFLRVG 837
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Cavefish
Match: abca3b (ATP binding cassette subfamily A member 3 [Source:NCBI gene;Acc:103033960]) HSP 1 Score: 189.504 bits (480), Expect = 8.134e-55 Identity = 96/199 (48.24%), Postives = 134/199 (67.34%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHS-GEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR+L L PHA KL ++ SGGNKRKLS +ALIG P VIFLDEP++GMD ARR LW+ + + T E+ A+++TSH+MEECEALC RL++MVNG+ KCLGS QHLKSKFG Y + ++H+ + E + + K I+ F V L+DE+ + Y K+ + ++F E K +I DY +SQ++LE VF++ A Sbjct: 1230 LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVTR-TRESGKAIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHTEPDLEEMDIQLFKDFIESTFPGSV-LKDEHQGMVHYHLTDKMLTWAQVFGTLEAAKEKYSIEDYCVSQISLEQVFLSFA 1426 HSP 2 Score: 111.694 bits (278), Expect = 8.503e-28 Identity = 73/198 (36.87%), Postives = 108/198 (54.55%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQY----QFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFI 642 +R L+L ++ LSGG KRKLS IALIG+ KV+ LDEPTSGMD ARR W+++Q + ++LT+H M+E + L R++IM GE++C GS LK+K+G Y++ I +A N E + + ++ + SL A L Y + SK + LF E + I Y S T+E+VF+ Sbjct: 640 IRVLNLEDKRNSQSKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQG--EKRGRTILLTTHFMDEADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVI---VKDALCNVSEITRLV--HMYVPNASLESSAGAELSYILPKESTSKFEL--LFAELEMNREELGIASYGASVTTMEEVFL 828
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006855.1 (pep scaffold:Pmarinus_7.0:GL486953:391:4596:1 gene:ENSPMAG00000006189.1 transcript:ENSPMAT00000006855.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 187.193 bits (474), Expect = 9.369e-59 Identity = 101/203 (49.75%), Postives = 135/203 (66.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSK-IRIFKLFEFFEQMKATKTILDYSISQMTLED---VFINLASK 657 L+ L LT +A K SGGNKRKLSTAIALIG P +IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL+IMVNG KCLGS+QHLK++FGD Y + IR S T + ++V + +F D L++ + +QYQ S+ + + +F EQ+ + DYS+SQ TL++ VF+N A K Sbjct: 108 LQKLGLTSYADKPAGTYSGGNKRKLSTAIALIGYPPLIFLDEPTTGMDPKARRFLWNLILDIIKTGR-SVVLTSHSMEECEALCTRLAIMVNGHFKCLGSIQHLKNRFGDGYMITIRTRS----TLHVKEVLRFFSRSF-PDAVLKERHHTKVQYQLKSETLSLAAVFTKMEQVLDVLGVEDYSVSQTTLDNDPQVFVNFAKK 304
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010397.1 (pep scaffold:Pmarinus_7.0:GL480213:155963:163950:1 gene:ENSPMAG00000009413.1 transcript:ENSPMAT00000010397.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 168.318 bits (425), Expect = 1.339e-51 Identity = 86/209 (41.15%), Postives = 131/209 (62.68%), Query Frame = 1 Query: 58 KLRNLS--LTPHATKL--------TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +LR + L P AT+ SGG KRKLSTA+AL+G+P V+FLDEP++GMD ARR LW+ + ++ E + A+++TSH+MEECEALC R++IMVNG+ +CLGS QHLKS++G Y + R+ + +A+T + K ++ F + L+D++ + Y + ++F E+ K + DYSISQ++LE VF+ A Sbjct: 89 RLRGVPERLIPWATRTGRVPRVAPPHRRSGGTKRKLSTAVALMGSPPVVFLDEPSTGMDPVARRLLWDALSRVREEGR-ALVITSHSMEECEALCTRIAIMVNGQFRCLGSQQHLKSRYGSGYTLLARIRAEQADT---QPFKHFVETTFPGSI-LKDQHQGLVHYHLTDMNMSWAQVFGMLEKAKRDYCLDDYSISQISLEQVFLGFA 292
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Sea Lamprey
Match: abca12 (ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]) HSP 1 Score: 176.792 bits (447), Expect = 4.090e-51 Identity = 91/197 (46.19%), Postives = 135/197 (68.53%), Query Frame = 1 Query: 70 LSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKI-RIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 L L+ HA KL + SGG KRKLSTA+ALIG P+++ LDEP+SGMD ++R+LW I + +VILTSH+MEECEALC +L+IMVNG+ KCLG++QHLK++FG+ + +K+RL SG ++ +V + I F L++++ + L++Q S ++ ++F E+ K + +I YSISQ TL+ VFIN A + Sbjct: 1572 LHLSLHADKLVKTYSGGTKRKLSTALALIGKPQLLLLDEPSSGMDPKSKRYLWKTITREV-RGGCSVILTSHSMEECEALCDKLAIMVNGQFKCLGTLQHLKNRFGNGHMIKLRLSSGNSKVT---EVTEFITSHF-PGAYLKEQHISQLEFQVPSNAGKLSEIFIALEKEKESLSIQHYSISQTTLDQVFINFARQ 1763 HSP 2 Score: 100.908 bits (250), Expect = 9.309e-25 Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFG 387 L +L L H KL LSGG KRKLS AIA IG + LDEPTSG+D +RR +WN+I K + +IL++H+++E E L R++++ +G+++C GS Q+LK +G Sbjct: 500 LNDLGLYNHKDKLVGTLSGGMKRKLSIAIAFIGGSTTVILDEPTSGVDPCSRRSIWNLILK--HRAGRTIILSTHHLDEAEVLSDRIAVLEHGKLRCCGSPQYLKEIYG 606
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002495.1 (pep scaffold:Pmarinus_7.0:GL480265:53:27909:1 gene:ENSPMAG00000002218.1 transcript:ENSPMAT00000002495.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 103.605 bits (257), Expect = 9.323e-26 Identity = 76/230 (33.04%), Postives = 123/230 (53.48%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI---------------RLHS------GEAETN------NH-EKVKKIIQEAFLSDVSLRDENFAT-LQYQFCS---KIRIFK-LFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++++ L + ++++LSGG +RKLS IA +G KV+FLDEPT+G+D ARR +WN++ K + I IL++H+M+E + L R++I+ +G ++C GS LK+ FG YY+ + L S G E+N NH V +++Q+ + D L ENF L Y S K F LF+ ++ A + Y +S TLE++F+ +A Sbjct: 480 IQDVDLAHKRSDISKSLSGGMQRKLSIGIAFVGGSKVVFLDEPTAGVDPYARRGIWNLLLKYRHGRTI--ILSTHHMDEADLLGDRIAIISHGRLRCCGSSLFLKNAFGAGYYLTMVKRSGSGGSNSSCLAGLASSSDEGFGSDESNPDSIAANHVSSVTRLLQQ-HVPDARLI-ENFGQELTYLLPSHGAKDGTFALLFKELDEKLAELGVSSYGVSDTTLEEIFLKVA 705
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006988.1 (pep scaffold:Pmarinus_7.0:GL478499:147909:176415:-1 gene:ENSPMAG00000006318.1 transcript:ENSPMAT00000006988.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 99.7525 bits (247), Expect = 1.849e-24 Identity = 47/107 (43.93%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 88 ATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 A K Q+LSGG KRKLS A AL+G P+++ LDEPTSGMD +RR +W+++ + + + +L++H+MEE +AL +++ G +KC GS LK+KFG Y + + Sbjct: 577 ADKQVQDLSGGQKRKLSLAAALLGKPRLLILDEPTSGMDPVSRRRVWSLL--LGGKRECVTLLSTHSMEEADALADWKAVLSQGRLKCAGSSLFLKTKFGVGYRLTL 681
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Yeast
Match: YOL075C_mRNA (Putative ABC transporter [Source:SGD;Acc:S000005435]) HSP 1 Score: 56.6102 bits (135), Expect = 8.162e-10 Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 103 QNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSH 285 + LSGG KR+LS +I NP ++FLDEPT+G+DA + + ++K+ E+ I++ H Sbjct: 184 RGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIH 244 HSP 2 Score: 53.5286 bits (127), Expect = 7.682e-9 Identity = 20/64 (31.25%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 94 KLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSH 285 + + +SGG KR+++ + L+ +P ++ LDEPTSG+D+ + +++K+ E +I+T H Sbjct: 834 EFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIH 897
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Yeast
Match: NEW1 (ATP binding cassette protein; cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction [Source:SGD;Acc:S000006147]) HSP 1 Score: 55.0694 bits (131), Expect = 2.326e-9 Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 106 NLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGD 390 +LSGG K+ A A+ NP ++ LDEPT+ +D + L I+ + V++ SHN E ALC I+ NG+M GS Q +SKF D Sbjct: 1032 SLSGGQLVKVVIAGAMWNNPHLLVLDEPTNYLDRDSLGALAVAIRDWSG----GVVMISHNNEFVGALCPEQWIVENGKMVQKGSAQVDQSKFED 1122
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Yeast
Match: ADP1 (Putative ATP-dependent permease of the ABC transporter family [Source:SGD;Acc:S000000604]) HSP 1 Score: 52.7582 bits (125), Expect = 1.325e-8 Identity = 29/106 (27.36%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 88 ATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEE-CEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYV 402 + + +SGG KR++S A L+ +P V+FLDEPTSG+DA + + +++++ ++L+ H L +L ++ GEM G+ + + ++ Y+ Sbjct: 523 GNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSDYNRTLVLSIHQPRSNIFYLFDKLVLLSKGEMVYSGNAKKVSEFLRNEGYI 628
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Nematostella
Match: EDO46878 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNL9]) HSP 1 Score: 193.741 bits (491), Expect = 1.018e-56 Identity = 98/198 (49.49%), Postives = 136/198 (68.69%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++ ++L + SGGNKRKLSTAIAL+GNP ++F+DEPT+GMD ARRFLWN+I + E + VILTSH+MEECEALC+R++IMVNG+MKCLGS QHLK+KFGD Y V +R+ +T E+V + I + F + V L+D++ ++YQ C + + +LF E + I DYS++Q TL+ VFIN A Sbjct: 1442 IQRMNLVQYQDVCAGKYSGGNKRKLSTAIALVGNPAIVFMDEPTTGMDPKARRFLWNIITGIMKEGR-TVILTSHSMEECEALCNRVAIMVNGQMKCLGSPQHLKNKFGDGYTVILRVAGSNPDT---EQVCQFIIQCFPNAV-LKDKHHNMVEYQIPCQGLSVSRLFGHLEANRKMFDIEDYSVTQTTLDQVFINFA 1634 HSP 2 Score: 100.908 bits (250), Expect = 1.439e-24 Identity = 46/116 (39.66%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 L+++ LT +L+ NLSGG KRKLS A+A + +V+ LDEPT+G+D ARR +W+++ K + V+L++H+M+E + L R++I+ G+++C G+ LKS +G+ YY+ + Sbjct: 488 LKDVGLTNKRHELSANLSGGMKRKLSVAMAFVAESRVVILDEPTAGVDPYARRSIWDLLLKYKKDR--TVLLSTHHMDEADVLGDRIAIISQGKLQCCGTSLFLKSHYGNGYYLTL 601
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Nematostella
Match: EDO28092 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T7F9]) HSP 1 Score: 174.096 bits (440), Expect = 3.752e-55 Identity = 85/177 (48.02%), Postives = 121/177 (68.36%), Query Frame = 1 Query: 109 LSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDV 636 +SGGNKRKLSTAIAL+GNP +IFLDEPT+GMD ARRFLW+ + + + +++LTSH+MEECEALC RL+IMVNG+ KC+GS QHLKS+FG Y + +++ + +N E+ ++ + F L N L YQ S ++ ++F E+ +A+ I+DYS+SQ +LE V Sbjct: 8 ISGGNKRKLSTAIALVGNPPIIFLDEPTTGMDPVARRFLWDSLTHVMKGGR-SIVLTSHSMEECEALCTRLAIMVNGQFKCVGSAQHLKSRFGMGYTLMLKVEARLVPVSNTEQAQQFVSSTFPGAQLLESHN-GMLTYQINSTELSWSRIFGELERNRASLNIVDYSVSQTSLEQV 182
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Nematostella
Match: EDO48951 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI12]) HSP 1 Score: 180.259 bits (456), Expect = 5.375e-52 Identity = 94/198 (47.47%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 + +L+L A KL + SGGNKRKLSTAIAL+GNP +IFLDEPT+GMD ARRFLW+ + + + +++LTSH+MEECEALC RL+IMVNG+ KC+GS QHLKS+FG Y + +++ + +N E + + F L N L YQ S ++ ++F E+ +A+ I+DYS+SQ +LE VF+NLA Sbjct: 1528 IEHLNLGKWADKLCGDYSGGNKRKLSTAIALVGNPPIIFLDEPTTGMDPVARRFLWDSLTHVMKGGR-SIVLTSHSMEECEALCTRLAIMVNGQFKCVGSAQHLKSRFGMGYTLMLKVEARLVPVSNTE---QFVSSTFPGAQLLESHN-GMLTYQINSTELSWSRIFGELERNRASLNIVDYSVSQTSLEQVFLNLA 1720 HSP 2 Score: 102.449 bits (254), Expect = 5.565e-25 Identity = 66/189 (34.92%), Postives = 103/189 (54.50%), Query Frame = 1 Query: 100 TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEA-FLSDVSLRDENF----ATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 + LSGG KRKL+ AIAL+G + +FLDEPTSGMD ARR W+++ K ++ VILT+H M+E + L R++IM +G+++C GS LKS++G Y++ + + V++ + A LS+V E A+ ++ LF E K I Y +S T+E+VF+ + Sbjct: 631 SSELSGGMKRKLNCAIALVGGSETVFLDEPTSGMDPYARRATWDLLLK--HKAGKTVILTTHFMDEADFLGDRIAIMADGQLRCCGSSLFLKSRYGVGYHLTLVKKEDCDDNAIINAVRETVPSAQVLSNVGAEIEFVLNGEASKDFE--------SLFVKLENNKEDYGIASYGVSCTTMEEVFMKVG 809
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Nematostella
Match: EDO32071 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW57]) HSP 1 Score: 130.183 bits (326), Expect = 2.401e-36 Identity = 82/206 (39.81%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 55 HKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRL----HSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKL---FEFFEQMKATKTILDYSISQMTLEDVFINLA 651 H + + +T HA K + LSGG KRKLS +A++G+P ++ LDEP++GMD ARRFL + ILT+H+MEE +ALC R+ IMV G++KCLGS QHLKSKFG Y ++I+L S + + + ++ ++ F + + R E+F K + KL F E+ K + I +YS SQ TLE VF+ A Sbjct: 102 HYMSAMKITEHANKRAKELSGGTKRKLSFGMAMLGDPDLLLLDEPSTGMDPSARRFLCKNVT-----GARGAILTTHSMEEADALCSRVGIMVKGQLKCLGSTQHLKSKFGSGYTLEIKLSPSFQSSDPDVDMQTQLVAFVEGLFPN--AKRTESFGDRVIYKVPKSNVSKLSSTFATLEEGKRSIGIEEYSFSQSTLEQVFLEFA 300
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Nematostella
Match: EDO38879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBQ0]) HSP 1 Score: 93.5893 bits (231), Expect = 6.255e-22 Identity = 66/204 (32.35%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 103 QNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY---YVKIRLHSG---------------EAETNNHEKVKKIIQEAFLSDVSLR---DENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINL 648 + LSGG KRKLS A+A + + + LDEPT+G+D ARR +W+++ K I +L++H MEE + L R++I+ +G+++C+GS +LK +FG+ Y VK + S EA + EK+ I + +S L+ ++ F + K F KLF EQ I Y I+ LE+VF+ + Sbjct: 734 ETLSGGMKRKLSVAMAFVAGSRTVILDEPTAGVDPYARRAIWDLLIKYKKGRTI--LLSTHFMEEADILGDRIAIISSGKLRCVGSPLYLKRRFGEGYNLTLVKKSISSPHGSIGSFRRSTSSNLEASRRSEEKLTSFIT-SHISSAQLKHKTNQEFTFILPDNSIKRGAFKKLFADLEQNIDVLGIDSYGITHTLLEEVFLKV 934 HSP 2 Score: 52.7582 bits (125), Expect = 3.044e-8 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 1 Query: 52 RHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFL 180 + +R ++LT +A + SGGNKRKLSTAIALIG+P +IFL Sbjct: 1745 KWAIRKMNLTQYAKTPCKTYSGGNKRKLSTAIALIGDPPIIFL 1787 HSP 3 Score: 21.557 bits (44), Expect = 3.044e-8 Identity = 7/17 (41.18%), Postives = 11/17 (64.71%), Query Frame = 2 Query: 2 FYCRIRGIESNQIKSVV 52 Y R+RG+ +IK V+ Sbjct: 1728 LYARLRGVPEKEIKQVM 1744
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Medaka
Match: abca2 (ATP binding cassette subfamily A member 2 [Source:NCBI gene;Acc:101155855]) HSP 1 Score: 189.889 bits (481), Expect = 5.447e-55 Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 L L L+ +A + SGGNKRKLSTAIALIG P +IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL IMVNG KCLGS+QHLK++FGD Y + +R S + N ++V + F V L++ + +QYQ S +I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2149 LEKLELSKYADRPAGTYSGGNKRKLSTAIALIGFPPLIFLDEPTTGMDPKARRFLWNLILDIIKTGR-SVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKS----SVNVKEVVRFFNRNFPEAV-LKERHHTKVQYQLKSERISLAQVFSKMEQVMEVLGIEDYSVSQTTLDNVFVNFAKK 2342 HSP 2 Score: 106.301 bits (264), Expect = 6.620e-26 Identity = 71/223 (31.84%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAE-TNNHE-------------------KVKKIIQEAFLSDVSLRDENFATLQYQFCS---KIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + + LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS L+S +GD Y + + E +H+ +V K IQ+ S + + D N L Y S K F +LF+ EQ + + + + TLE+VF+ ++ + Sbjct: 1097 IADLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLRSTYGDGYKLTLVKKQPEGRGVQSHKLLTPPTQSPSSAQSPCSETRVTKFIQQFVASCLLVSDSN-TELSYVLPSEAVKKGCFERLFQALEQNLTSLALTSFGVMDTTLEEVFLKVSEE 1316
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Medaka
Match: abca2 (ATP binding cassette subfamily A member 2 [Source:NCBI gene;Acc:101155855]) HSP 1 Score: 189.889 bits (481), Expect = 5.485e-55 Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 L L L+ +A + SGGNKRKLSTAIALIG P +IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL IMVNG KCLGS+QHLK++FGD Y + +R S + N ++V + F V L++ + +QYQ S +I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2062 LEKLELSKYADRPAGTYSGGNKRKLSTAIALIGFPPLIFLDEPTTGMDPKARRFLWNLILDIIKTGR-SVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKS----SVNVKEVVRFFNRNFPEAV-LKERHHTKVQYQLKSERISLAQVFSKMEQVMEVLGIEDYSVSQTTLDNVFVNFAKK 2255 HSP 2 Score: 107.457 bits (267), Expect = 2.583e-26 Identity = 70/222 (31.53%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHE-------------------KVKKIIQEAFLSDVSLRDENFATLQYQFCS---KIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + + LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS L+S +GD Y + + E + + +V K IQ+ S + + D N L Y S K F +LF+ EQ + + + + TLE+VF+ ++ + Sbjct: 977 IADLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLRSTYGDGYKLTLVKKQPEGRGQSSQLLTPPTQSPSSAQSPCSETRVTKFIQQFVASCLLVSDSN-TELSYVLPSEAVKKGCFERLFQALEQNLTSLALTSFGVMDTTLEEVFLKVSEE 1195
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Medaka
Match: abca2 (ATP binding cassette subfamily A member 2 [Source:NCBI gene;Acc:101155855]) HSP 1 Score: 189.889 bits (481), Expect = 5.485e-55 Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCS-KIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 L L L+ +A + SGGNKRKLSTAIALIG P +IFLDEPT+GMD ARRFLWN+I + + +V+LTSH+MEECEALC RL IMVNG KCLGS+QHLK++FGD Y + +R S + N ++V + F V L++ + +QYQ S +I + ++F EQ+ I DYS+SQ TL++VF+N A K Sbjct: 2062 LEKLELSKYADRPAGTYSGGNKRKLSTAIALIGFPPLIFLDEPTTGMDPKARRFLWNLILDIIKTGR-SVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKS----SVNVKEVVRFFNRNFPEAV-LKERHHTKVQYQLKSERISLAQVFSKMEQVMEVLGIEDYSVSQTTLDNVFVNFAKK 2255 HSP 2 Score: 107.457 bits (267), Expect = 2.583e-26 Identity = 70/222 (31.53%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHE-------------------KVKKIIQEAFLSDVSLRDENFATLQYQFCS---KIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 + +L L+ L Q LSGG KRKLS AIA +G + + LDEPT+G+D ARR +W++I K I +L++H+M+E + L R++I+ +G++KC GS L+S +GD Y + + E + + +V K IQ+ S + + D N L Y S K F +LF+ EQ + + + + TLE+VF+ ++ + Sbjct: 977 IADLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTI--LLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLRSTYGDGYKLTLVKKQPEGRGQSSQLLTPPTQSPSSAQSPCSETRVTKFIQQFVASCLLVSDSN-TELSYVLPSEAVKKGCFERLFQALEQNLTSLALTSFGVMDTTLEEVFLKVSEE 1195
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Medaka
Match: abca3b (ATP binding cassette subfamily A member 3 [Source:NCBI gene;Acc:101174998]) HSP 1 Score: 186.808 bits (473), Expect = 7.590e-54 Identity = 96/199 (48.24%), Postives = 128/199 (64.32%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLH-SGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LR+L L PHA KL ++ SGGNKRKLS +ALIG P VIFLDEP++GMD ARR LW+ I + K A+++TSH+MEECEALC RL++MVNG+ KCLGS QHLKSKFG Y + ++H E E ++ K I+ F L+DE+ + Y K + ++F E K I DY +SQ++LE VF++ A Sbjct: 1501 LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAITHIRESGK-AIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHVEAELEESDLRVFKDFIESTFPGS-QLKDEHQGMVHYHLTDKALTWAQVFGTLEAAKEKYQIEDYCVSQISLEQVFLSFA 1697 HSP 2 Score: 111.694 bits (278), Expect = 7.982e-28 Identity = 72/199 (36.18%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC--SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L+L ++ LSGG KRKLS IALIG+ KV+ LDEPTSGMD ARR W+++Q + ++LT+H M+E + L R++IM GE++C GS LK+K+G Y++ I +A N E + + ++ + +L A L Y S R LF E + I Y S T+E+VF+ + Sbjct: 644 IRILNLEDKRRARSKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQG--EKRGRTILLTTHFMDEADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVI---VKDAFCNVSEITRLV--HMYVPNATLESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVG 835
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Medaka
Match: zgc:172302 (ATP-binding cassette sub-family A member 1 [Source:NCBI gene;Acc:101162276]) HSP 1 Score: 186.037 bits (471), Expect = 1.341e-53 Identity = 101/202 (50.00%), Postives = 138/202 (68.32%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF----CSKIRIF-KLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +R L LT +A + SGGNKRKLSTAI+LIG P VIFLDEPT+GMD A+RFLWN I +T E K AV+LTSH+MEECEALC R++IMVNG+ +CLGSVQHLK++FGD Y V +RL +++T + V + + ++F ++ L++++ LQY CS IF L E++ + D+S+SQ TL+ VFI+ A Sbjct: 2050 VRKLGLTQYAEQKAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIHSVTKEGK-AVVLTSHSMEECEALCTRMAIMVNGQFQCLGSVQHLKNRFGDGYTVILRLADTKSDTESC-PVDEYMTKSF-PNIELKEQHQNVLQYHLPSHGCSLALIFDALANNCEELG----VADFSVSQTTLDQVFISFA 2244 HSP 2 Score: 98.2117 bits (243), Expect = 3.380e-23 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 100 TQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKI 408 T+NLSGG +RKLS AIA +G KV+ LDEPT+G+D +RR +W+++ K I IL++H M+E E L R++I+ G++ C GS LKS+ G YY+ + Sbjct: 1059 TKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLKYRKGRTI--ILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSQLGSGYYLTV 1159
BLAST of ATP-binding cassette sub-family A member 1 vs. Planmine SMEST
Match: SMESG000029537.1 (SMESG000029537.1) HSP 1 Score: 414.461 bits (1064), Expect = 1.206e-133 Identity = 203/212 (95.75%), Postives = 204/212 (96.23%), Query Frame = 1 Query: 28 VESN*IS--CRHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 657 +ESN I LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK Sbjct: 1781 IESNQIKSVVDTSLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLASK 1992 HSP 2 Score: 128.642 bits (322), Expect = 8.786e-34 Identity = 71/205 (34.63%), Postives = 130/205 (63.41%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVK-IRLHSGEAETN-NHEKVKKIIQEAFLSDVSLRDENFATLQYQFC------SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++++ LT L+ +LSGG KRKLS A+A IGN +V+FLDEPT+G+D ARR +W+++ K + ++ +ILT+H+M+E + L R++I+ G+++C GS+ LK KFG+ YY+ ++ + + +N N E + K ++ +++D + +E + LQ+ + + +LF+ +Q A +I+ Y +S +LE+VF+ +A Sbjct: 817 IKDVDLTEKINALSMHLSGGMKRKLSIAMAFIGNSRVVFLDEPTAGVDPFARRGIWDLLIKYRSHDR-TIILTTHHMDEADYLSDRVAIISQGKLQCCGSLVFLKRKFGEGYYLSLLKNQNNHSNSNRNGENILKFVK-IYIADARMMEE--SRLQWTIVLPQNDINSRKFTELFKNLDQHMAEMSIISYGLSDTSLEEVFLKVA 1017
BLAST of ATP-binding cassette sub-family A member 1 vs. Planmine SMEST
Match: SMESG000032861.1 (SMESG000032861.1) HSP 1 Score: 328.561 bits (841), Expect = 1.735e-103 Identity = 156/199 (78.39%), Postives = 172/199 (86.43%), Query Frame = 1 Query: 55 HKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYV IR+ G+ N++EKVK II++ F S+VS D +F TLQY+F S ++ +F+FFE +K ILDYS+SQ TL+DVFIN A Sbjct: 1791 RSLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVTIRMPFGKDHENDNEKVKAIIEDKFPSEVSFVDGSFVTLQYRFASSTKLAVIFDFFENLKKDSIILDYSVSQTTLDDVFINFA 1989 HSP 2 Score: 122.094 bits (305), Expect = 1.488e-31 Identity = 72/208 (34.62%), Postives = 122/208 (58.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAE-------TNNHEKVKKIIQEAFLSDVSL----RDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 + ++ LT ++NLSGG KRKLS A+A IG+ KV+FLDEPT+G+D ARR +W+++ K N+ + +ILT+H+M+E + L R++I+ G+++C GS LK +FGD YY+ + +S E +++ EKV I+ A ++D + R + L + + LF ++ + I+ Y +S +LE+VF+ +A Sbjct: 801 IEDVGLTKKMKSFSKNLSGGMKRKLSVAMAFIGDSKVVFLDEPTAGVDPFARRGIWDLLIKYRNDER-TIILTTHHMDEADYLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIR-AHITDAKMIEETRTQWTIVLPQNEINSGKFSDLFADIDRSLSGLNIVSYGLSDTSLEEVFLKVA 1006
BLAST of ATP-binding cassette sub-family A member 1 vs. Planmine SMEST
Match: SMESG000032891.1 (SMESG000032891.1) HSP 1 Score: 326.635 bits (836), Expect = 9.420e-103 Identity = 159/210 (75.71%), Postives = 176/210 (83.81%), Query Frame = 1 Query: 28 VESN*IS--CRHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 +ESN I LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYV IR+ G+ N++ KVK II++ F S+VS D +F TLQY+F S ++ +F+FFE +K ILDYS+SQ TL+DVFIN A Sbjct: 1770 IESNQIKSVVDTSLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVTIRMPFGKDHANDNGKVKAIIEDKFPSEVSFVDGSFVTLQYRFASSTKLAVIFDFFENLKKDSIILDYSVSQTTLDDVFINFA 1979 HSP 2 Score: 123.25 bits (308), Expect = 5.479e-32 Identity = 73/208 (35.10%), Postives = 122/208 (58.65%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAE-------TNNHEKVKKIIQEAFLSDVSL----RDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 + ++ LT ++NLSGG KRKLS A+A IG+ KV+FLDEPT+G+D ARR +WN++ K N+ + +ILT+H+M+E + L R++I+ G+++C GS LK +FGD YY+ + +S E +++ EKV I+ A ++D + R + L + + LF ++ + I+ Y +S +LE+VF+ +A Sbjct: 791 IEDVGLTKKMKSFSKNLSGGMKRKLSIAMAFIGDSKVVFLDEPTAGVDPFARRGIWNLLIKYRNDER-TIILTTHHMDEADYLSDRIAIISQGKLQCCGSSVFLKKEFGDGYYLILVKNSRSQEEDFRSGISSSGEKVLNFIR-AHITDAKMIEETRTQWTIVLSQNEINNGKFSDLFADIDRSLSGLNIVSYGLSDTSLEEVFLKVA 996
BLAST of ATP-binding cassette sub-family A member 1 vs. Planmine SMEST
Match: SMESG000029534.1 (SMESG000029534.1) HSP 1 Score: 295.049 bits (754), Expect = 1.042e-91 Identity = 146/207 (70.53%), Postives = 171/207 (82.61%), Query Frame = 1 Query: 28 VESN*IS--CRHKLRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQF-CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVF 639 +ESN I L+NLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGD+YYVKI L+S + + ++ +VK I+ F S +S++DENF TL Y F S I++ +F FF +MK I+D+++ Q +L+++F Sbjct: 1863 IESNQIKSVVDTSLKNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDNYYVKIHLYSRKCQISHRLEVKLAIENNFRSGISIKDENFLTLLYTFDLSFIKLSDIFTFFHKMKVDGLIIDFTVYQTSLDEIF 2069 HSP 2 Score: 119.398 bits (298), Expect = 1.358e-30 Identity = 70/210 (33.33%), Postives = 121/210 (57.62%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDY-YVKIRLHSGEAE------TNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFC------SKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 ++++ LT L++ LSGG KRKLS A+A IG+P ++FLDEPT+G+D ARR +W+++ K N+ + +ILT+H M+E + L R++I+ G+++C GS LK KFGD Y + ++ + + E +N+ +K+ + I+ + + D + E Q+ F + + LF ++ L Y +S +LE+VFI +A Sbjct: 865 IKDVGLTAKVNTLSKKLSGGMKRKLSLALAFIGDPSIVFLDEPTAGVDPFARRGIWDLLIKYRNDER-TIILTTHQMDEADYLSDRIAIISQGKLQCCGSSVFLKRKFGDGYRLILVKNFNAQKENFRKGISNSGDKLLQFIK-SHIPDAKMETETMT--QWSFVLPQNDSNSCKFSGLFVNLDEEIDNLNALSYGLSDTSLEEVFIRVA 1070
BLAST of ATP-binding cassette sub-family A member 1 vs. Planmine SMEST
Match: SMESG000068605.1 (SMESG000068605.1) HSP 1 Score: 290.812 bits (743), Expect = 2.604e-90 Identity = 138/197 (70.05%), Postives = 162/197 (82.23%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYYVKIRLHSGEAETNNHEKVKKIIQEAFLSDVSLRDENFATLQYQFCSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 L+NLSL PH KLTQ LSGGNKRKLSTAIA+IG PK++FLDEPTSGMDAGARRFLWNVIQ MT ENK AVILTSHNMEECE LCHRLSIMVNGEMKCLG+VQHLKSKFGDDY+VKIR++ E E+ +K+K I++ F VSL+DENF TLQY+F +++ +F FFE +KA I DYS+SQ +L++VFIN A Sbjct: 1819 LKNLSLIPHTKKLTQTLSGGNKRKLSTAIAIIGFPKIVFLDEPTSGMDAGARRFLWNVIQTMTTENKTAVILTSHNMEECEVLCHRLSIMVNGEMKCLGNVQHLKSKFGDDYFVKIRMNFIENES---DKIKAIMKTQFPQGVSLKDENFITLQYRFNCSLKLSTIFHFFENLKANGVIADYSVSQTSLDEVFINFA 2012 HSP 2 Score: 120.168 bits (300), Expect = 8.075e-31 Identity = 73/210 (34.76%), Postives = 121/210 (57.62%), Query Frame = 1 Query: 61 LRNLSLTPHATKLTQNLSGGNKRKLSTAIALIGNPKVIFLDEPTSGMDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKCLGSVQHLKSKFGDDYY-VKIRLHSGEAETNNHEK------VKKIIQEAFLSDVSLRDENFATLQYQF------CSKIRIFKLFEFFEQMKATKTILDYSISQMTLEDVFINLA 651 + + LT + LT+NLSGG KRKLS A+A +G+ +V+FLDEPT+G+D ARR +W+++ K E++ A+ILT+H+M+E + L R++I+ G+++C GS LK +FG+ YY + ++ S + E +E K IQ + D + +E + CSK LF+ ++ I+ Y +S +LE+VF+ +A Sbjct: 827 IEEVGLTKKISSLTKNLSGGMKRKLSVALAFVGDSRVVFLDEPTAGVDPFARRGIWDLLVKYRCEDR-AIILTTHHMDEADYLSDRIAIISQGKLQCCGSSVFLKKEFGNGYYLIIVKTESIQWEDFQNELSISGGIALKFIQNH-VPDAKMMEETRSQWTIALPQSENNCSKFP--DLFDNLDRAMEDLGIVTYGLSDTSLEEVFLKVA 1032 The following BLAST results are available for this feature:
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP-binding cassette sub-family A member 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30010001 ID=SMED30010001|Name=ATP-binding cassette sub-family A member 1|organism=Schmidtea mediterranea sexual|type=transcript|length=692bpback to top protein sequence of SMED30010001-orf-1 >SMED30010001-orf-1 ID=SMED30010001-orf-1|Name=SMED30010001-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=154bp MDAGARRFLWNVIQKMTNENKIAVILTSHNMEECEALCHRLSIMVNGEMKback to top Annotated Terms
The following terms have been associated with this transcript:
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