Translation initiation factor SUI1

Overview


Name	Translation initiation factor SUI1
Smed ID	SMED30009874
Length (bp)	607

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Translation initiation factor SUI1 (SMED30009874) t-SNE clustered cells

Violin plots show distribution of expression levels for Translation initiation factor SUI1 (SMED30009874) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Translation initiation factor SUI1 (SMED30009874) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Translation initiation factor SUI1 (SMED30009874) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30009874

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30009874	SMESG000021046.1	SmedASXL_005964	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
nervous system	SMED30009874	SMESG000021046.1	dd_Smed_v4_1681_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30009874	SMESG000021046.1	dd_Smed_v4_1681_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30009874	SMESG000021046.1	dd_Smed_v4_1681_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30009874	SMESG000021046.1	dd_Smed_v4_1681_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1 (eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249])

HSP 1 Score: 118.627 bits (296), Expect = 4.428e-34
Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNL + DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    LA +D +++HGF
Sbjct:    3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1 (eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249])

HSP 1 Score: 118.627 bits (296), Expect = 5.368e-34
Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNL + DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    LA +D +++HGF
Sbjct:    3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1B (eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792])

HSP 1 Score: 116.316 bits (290), Expect = 3.476e-33
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQ+ DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Match: EIF1 (eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:HGNC:3249])

HSP 1 Score: 53.1434 bits (126), Expect = 1.722e-9
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 3

Query:  234 YDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLT 368
            YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL 
Sbjct:    2 YDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLV 46

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Celegans
Match: eif-1 (Eukaryotic Initiation Factor [Source:UniProtKB/TrEMBL;Acc:Q967F1])

HSP 1 Score: 114.775 bits (286), Expect = 4.776e-33
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 3

Query:   90 MSIQNL-QTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSI NL +  D F  ++        V H+R+QQR GRKTITTVQGI  +YD  RI++  KK+  CNGT+V+H EYGEV+QL GDQR KVKDFL    +  E + R+HGF
Sbjct:    1 MSIANLNRPADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQYLKKKHSCNGTIVEHPEYGEVIQLTGDQRDKVKDFLIKVGIVNESNCRVHGF 109

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BLAST of Translation initiation factor SUI1 vs. Ensembl Fly
Match: eIF1 (gene:FBgn0035423 transcript:FBtr0073044)

HSP 1 Score: 142.51 bits (358), Expect = 7.681e-44
Identity = 65/110 (59.09%), Postives = 86/110 (78.18%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQ--VIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNL T+DPFAD  +  D+D Q  ++H+R+QQRNGRKT+TTVQG+  +YD  +I++S KKEF CNGTV++H EYGEVLQLQGDQR+ +  +LT   LA  D +++HGF
Sbjct:    1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Match: eif1 (eukaryotic translation initiation factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-956])

HSP 1 Score: 122.865 bits (307), Expect = 7.348e-36
Identity = 64/111 (57.66%), Postives = 84/111 (75.68%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQT DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FLT   LA E+ +++HGF
Sbjct:    3 AIQNLQTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLTDIELAKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1109])

HSP 1 Score: 115.546 bits (288), Expect = 5.263e-33
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQ+ DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    3 NIQNLQSFDPFADATKGDDLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 113

[Close]

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQ+ DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    3 NIQNLQSFDPFADATKGDDLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1 (eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:448694])

HSP 1 Score: 119.783 bits (299), Expect = 1.432e-34
Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKEN----TDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQ  DPFA+               IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTVV+H EYGEV+QLQGDQR+    FLT   LA ED +++HGF
Sbjct:    3 AIQNLQPFDPFANASTGGIWLPAGSEDSIHIRIQQRNGRKTLTTVQGIADAYDKKKLVKAFKKKFACNGTVVEHPEYGEVIQLQGDQRKNACQFLTEVGLAKEDQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:394611])

HSP 1 Score: 115.931 bits (289), Expect = 5.536e-33
Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            SIQNL + DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    3 SIQNLNSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLMEIGIVKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1 (eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:448694])

HSP 1 Score: 105.531 bits (262), Expect = 6.540e-29
Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKEN----TDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLT 368
            +IQNLQ  DPFA+               IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTVV+H EYGEV+QLQGDQR+    FLT
Sbjct:    3 AIQNLQPFDPFANASTGGIWLPAGSEDSIHIRIQQRNGRKTLTTVQGIADAYDKKKLVKAFKKKFACNGTVVEHPEYGEVIQLQGDQRKNACQFLT 98

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:394611])

HSP 1 Score: 105.145 bits (261), Expect = 6.932e-29
Identity = 54/103 (52.43%), Postives = 75/103 (72.82%), Query Frame = 3

Query:  117 DPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +PFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    9 NPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLMEIGIVKEEQLKVHGF 111

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:394611])

HSP 1 Score: 102.834 bits (255), Expect = 5.415e-28
Identity = 57/109 (52.29%), Postives = 79/109 (72.48%), Query Frame = 3

Query:  102 NLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLT-ASRLATEDSIRIHGF 413
            NL++ DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL     +  E+ +++HGF
Sbjct:    6 NLKS-DPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLMEVIGIVKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1 (eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125])

HSP 1 Score: 118.627 bits (296), Expect = 3.776e-34
Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNL + DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    LA +D +++HGF
Sbjct:    3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1b (eukaryotic translation initiation factor 1B [Source:MGI Symbol;Acc:MGI:1916219])

HSP 1 Score: 116.316 bits (290), Expect = 2.386e-33
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQ+ DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1b (eukaryotic translation initiation factor 1B [Source:MGI Symbol;Acc:MGI:1916219])

HSP 1 Score: 105.916 bits (263), Expect = 1.979e-29
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFL 365
            +IQNLQ+ DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL
Sbjct:    3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFL 97

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1 (eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125])

HSP 1 Score: 90.1225 bits (222), Expect = 2.125e-23
Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 3

Query:  165 IHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSI 398
            IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    L     I
Sbjct:    7 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEVSLGRPQCI 84

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Match: Eif1 (eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125])

HSP 1 Score: 74.7146 bits (182), Expect = 3.355e-17
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3

Query:  111 TKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEY 311
              DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EY
Sbjct:   40 ASDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEY 110

[Close]

BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|Q9VZS3|ETIF1_DROME (Eukaryotic translation initiation factor eIF1 OS=Drosophila melanogaster OX=7227 GN=eIF1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.699e-43
Identity = 65/110 (59.09%), Postives = 86/110 (78.18%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQ--VIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNL T+DPFAD  +  D+D Q  ++H+R+QQRNGRKT+TTVQG+  +YD  +I++S KKEF CNGTV++H EYGEVLQLQGDQR+ +  +LT   LA  D +++HGF
Sbjct:    1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110

[Close]

BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|P42678|ETIF1_ANOGA (Eukaryotic translation initiation factor eIF1 OS=Anopheles gambiae OX=7165 GN=eIF1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.584e-42
Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQ--VIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNL T DPFAD  +  D D Q  ++H+R+QQRNGRKT+TTVQG+  +YD  +I+++ KKEF CNGTV++H EYGEVLQLQGDQR+ +  +LT S LA  + +++HGF
Sbjct:    1 MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110

[Close]

BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|Q755R1|SUI1_ASHGO (Protein translation factor SUI1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SUI1A PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.951e-38
Identity = 61/108 (56.48%), Postives = 81/108 (75.00%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSI+NL++ DPFAD  ++  + S  IH+R+QQRNGRKT+TTVQGI E+YD  RILK  +K+F CNG +VK +E GE++QLQGDQR KV +FL       + +I+IHGF
Sbjct:    1 MSIENLKSFDPFADTGDDEASSSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFGCNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|P32911|SUI1_YEAST (Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SUI1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.274e-38
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSI+NL++ DPFAD  ++    S  IH+R+QQRNGRKT+TTVQG+ E+YD  RILK  KK+F CNG +VK  E GE++QLQGDQR KV +F+ +     + +I+IHGF
Sbjct:    1 MSIENLKSFDPFADTGDDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Match: sp|P79060|SUI1_SCHPO (Protein translation factor sui1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sui1 PE=3 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 5.489e-36
Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQN  T DPFAD  ++       IH+R+QQRNGRKT+TTVQG+  ++D+ RIL++ KK+F CNGT+VK ++ GEV+QLQGDQR KV +FLT      + +I+IHGF
Sbjct:    3 AIQNFNTVDPFADTGDDDAQPLNNIHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACNGTIVKDDDLGEVIQLQGDQRIKVMEFLTQQLGLQKKNIKIHGF 109

[Close]

BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A1S8WMB1 (Translation initiation factor SUI1 OS=Opisthorchis viverrini OX=6198 GN=X801_08616 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.124e-45
Identity = 72/108 (66.67%), Postives = 90/108 (83.33%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MS+QNLQT DPFA+  E+T ++ + +H+R+QQRNGRKTITTVQG+HEKYDK +ILK  KKEF CNGTVV HEEYGEV+QLQGDQR+ +K FL   +LAT + I++HGF
Sbjct:    1 MSLQNLQTYDPFAEEGEST-SEGKFVHIRIQQRNGRKTITTVQGLHEKYDKRKILKQCKKEFACNGTVVDHEEYGEVIQLQGDQREHMKKFLCTWKLATPEGIKLHGF 107

[Close]

BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A4S2ML60 (SUI1 domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_000155 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.022e-44
Identity = 71/108 (65.74%), Postives = 90/108 (83.33%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MS+QNLQT DPFA+  E+T ++ + +H+R+QQRNGRKTITTVQG+H+KYDK +ILK  KKEF CNGTVV HEEYGEV+QLQGDQR+ +K FL   +LAT + I++HGF
Sbjct:    1 MSLQNLQTYDPFAEEGEST-SEGKFVHIRIQQRNGRKTITTVQGLHDKYDKRKILKQCKKEFACNGTVVDHEEYGEVIQLQGDQREHMKKFLCTWKLATPEGIKLHGF 107

[Close]

BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A0R3SK57 (SUI1 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS5320 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.211e-42
Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            M++QNL+T DPFAD    T      +H+R+QQRNGRKT+TTVQGI EKYDK RILK  KK+FCCNG +V+H++YGEVLQLQGDQR+ + DFLT   L   D I+IHGF
Sbjct:    1 MALQNLKTHDPFADEDGETTAGDTTVHIRIQQRNGRKTLTTVQGIPEKYDKKRILKECKKDFCCNGNIVQHDQYGEVLQLQGDQREHIADFLTRYGLVKSDQIKIHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A074Z8E7 (SUI1 domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_08648 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.484e-42
Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 3

Query:   90 MSIQNLQT-------------KDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MS+QNLQT              DPFA+  E+T ++ + +H+R+QQRNGRKTITTVQG+HEKYDK +ILK  KKEF CNGTVV HEEYGEV+QLQGDQR+ +K FL   +LAT + I++HGF
Sbjct:    1 MSLQNLQTYGALFVSFLLLSSTDPFAEEGEST-SEGKFVHIRIQQRNGRKTITTVQGLHEKYDKRKILKQCKKEFACNGTVVDHEEYGEVIQLQGDQREHMKKFLCTWKLATPEGIKLHGF 120

[Close]

BLAST of Translation initiation factor SUI1 vs. TrEMBL
Match: A0A0X3NX05 (Protein translation factor SUI1 homolog OS=Schistocephalus solidus OX=70667 GN=SUI1 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.723e-42
Identity = 68/108 (62.96%), Postives = 87/108 (80.56%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MS+QNLQT+DPFAD  ++T  ++  +H+R+QQRNGRKT+TTVQGI +K+DK RILK+ KK+F CNG VV+HE+YGEVLQLQGDQR  + +FL    L  ED I+IHGF
Sbjct:    1 MSLQNLQTRDPFADEGDSTKGET-AVHIRIQQRNGRKTLTTVQGIPDKFDKKRILKACKKDFACNGNVVEHEQYGEVLQLQGDQRDHIAEFLKKYNLVKEDQIKIHGF 107

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1 (eukaryotic translation initiation factor 1b-like [Source:NCBI gene;Acc:103043673])

HSP 1 Score: 121.324 bits (303), Expect = 2.667e-35
Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNL+T DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FLT   LA E+ +++HGF
Sbjct:    3 AIQNLKTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLTDIELAKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:103042273])

HSP 1 Score: 115.161 bits (287), Expect = 5.600e-33
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            SIQNLQ+ DPFAD  +  +         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    3 SIQNLQSFDPFADATKGDNLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:103042273])

HSP 1 Score: 102.834 bits (255), Expect = 4.281e-28
Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 3

Query:  114 KDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            K PFAD  +  +         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    9 KYPFADATKGDNLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 112

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Match: eif1b (eukaryotic translation initiation factor 1B [Source:NCBI gene;Acc:103042273])

HSP 1 Score: 102.449 bits (254), Expect = 5.281e-28
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 3

Query:  120 PFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            PFAD  +  +         IH+R+QQRNGRKT+TTVQGI + YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +  E+ +++HGF
Sbjct:    7 PFADATKGDNLLPAGTEDKIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEINIVKEEQLKVHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
Match: eif1 (eukaryotic translation initiation factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-956])

HSP 1 Score: 129.028 bits (323), Expect = 4.594e-39
Identity = 57/111 (51.35%), Postives = 83/111 (74.77%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTDN----DSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQ+ DPF D  +  ++        +H+R+QQRNGRKT+T+VQGI + YDK +++++FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +A ED +++HGF
Sbjct:    3 AIQNLQSFDPFVDATKGEESLPGGTEDYVHIRIQQRNGRKTLTSVQGIADDYDKKKLVQAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICLFLAEVGIAKEDQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
Match: eif1 (eukaryotic translation initiation factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-956])

HSP 1 Score: 118.242 bits (295), Expect = 6.632e-35
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 3

Query:   93 SIQNLQTKDPFAD-------VKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            + QNLQ+ DPFAD       +   TD+    IH+R+QQRNGRKT+TTVQGI ++YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    +A ED I++HGF
Sbjct:    3 AFQNLQSFDPFADAIKGESSLPGGTDDS---IHIRIQQRNGRKTLTTVQGIGDQYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLAEIGIAKEDQIKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Yeast
Match: SUI1 (Translation initiation factor eIF1; component of a complex involved in recognition of the initiator codon; modulates translation accuracy at the initiation phase [Source:SGD;Acc:S000005188])

HSP 1 Score: 129.798 bits (325), Expect = 1.048e-39
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSI+NL++ DPFAD  ++    S  IH+R+QQRNGRKT+TTVQG+ E+YD  RILK  KK+F CNG +VK  E GE++QLQGDQR KV +F+ +     + +I+IHGF
Sbjct:    1 MSIENLKSFDPFADTGDDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Nematostella
Match: EDO43611 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RY03])

HSP 1 Score: 122.094 bits (305), Expect = 3.787e-36
Identity = 65/113 (57.52%), Postives = 83/113 (73.45%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADV-----KENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNLQ  +PF D      + NT     VIHVR+QQRNGRKT+TT+QGI ++YDK +++K+FKK+F CNGTVV H EYGE +QLQGDQR   ++FL    LA +D I++HGF
Sbjct:    1 MSIQNLQVYNPFEDASKGDGESNTSVQRDVIHVRIQQRNGRKTLTTIQGISDEYDKKKLVKAFKKQFACNGTVVDHPEYGECIQLQGDQRAHAQEFLLQIDLAKKDQIKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
Match: eif1 (eukaryotic translation initiation factor 1b [Source:NCBI gene;Acc:101163413])

HSP 1 Score: 120.168 bits (300), Expect = 6.887e-35
Identity = 63/111 (56.76%), Postives = 82/111 (73.87%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            +IQNLQT DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI   YDK +++K+FKK+F CNGTV++H EYGEV+QLQGDQR+ +  FL    LA E+ +++HGF
Sbjct:    3 AIQNLQTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIAADYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIDLAKEEQLKVHGF 113

[Close]

BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
Match: eif1 (eukaryotic translation initiation factor 1b [Source:NCBI gene;Acc:101163413])

HSP 1 Score: 63.1586 bits (152), Expect = 2.777e-13
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 3

Query:   93 SIQNLQTKDPFADVKENTD----NDSQVIHVRVQQRNGRKTITTVQGIHEKYD 239
            +IQNLQT DPFAD  +  D         IH+R+QQRNGRKT+TTVQGI   YD
Sbjct:    3 AIQNLQTFDPFADATKGDDRLPAGTEDYIHIRIQQRNGRKTLTTVQGIAADYD 55

[Close]

BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Match: SMESG000021046.1 (SMESG000021046.1)

HSP 1 Score: 223.402 bits (568), Expect = 9.192e-76
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF
Sbjct:    1 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Match: SMESG000069225.1 (SMESG000069225.1)

HSP 1 Score: 184.496 bits (467), Expect = 2.055e-60
Identity = 82/108 (75.93%), Postives = 99/108 (91.67%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNLQ+KDPFAD + +  NDSQVIH+R+QQRNGRKTITTVQGIHEKYDK +ILK+FKK+FCCNGT+VKHEEYGE+LQLQGDQRQK+ DFL +S L+T+D +++HGF
Sbjct:    1 MSIQNLQSKDPFADSQLDQVNDSQVIHIRIQQRNGRKTITTVQGIHEKYDKAKILKTFKKQFCCNGTIVKHEEYGEILQLQGDQRQKINDFLISSSLSTQDFVKVHGF 108

[Close]

BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Match: SMESG000033176.1 (SMESG000033176.1)

HSP 1 Score: 159.844 bits (403), Expect = 1.063e-50
Identity = 73/108 (67.59%), Postives = 89/108 (82.41%), Query Frame = 3

Query:   90 MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYDKTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATEDSIRIHGF 413
            MSIQNLQT DPFA+ ++       VIHVR+QQRNGRKT+TTVQGI EKYDK RILK  KKEFCCNGT+V HEEYGEV+QLQGDQR+ +++FLT ++L  E+ I++HGF
Sbjct:    1 MSIQNLQTFDPFAESEDRDGKSENVIHVRIQQRNGRKTLTTVQGIPEKYDKKRILKVCKKEFCCNGTIVPHEEYGEVMQLQGDQRKNIQEFLTKNKLVAENMIKVHGF 108

The following BLAST results are available for this feature:

BLAST of Translation initiation factor SUI1 vs. Ensembl Human
BLAST of Translation initiation factor SUI1 vs. Ensembl Celegans
BLAST of Translation initiation factor SUI1 vs. Ensembl Fly
BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
BLAST of Translation initiation factor SUI1 vs. TrEMBL
BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
BLAST of Translation initiation factor SUI1 vs. Ensembl Yeast
BLAST of Translation initiation factor SUI1 vs. Ensembl Nematostella
BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
BLAST of Translation initiation factor SUI1 vs. Planmine SMEST

BLAST of Translation initiation factor SUI1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4


Match Name	E-value	Identity	Description
EIF1	4.428e-34	54.95	eukaryotic translation initiation factor 1 [Source...	[more]
EIF1	5.368e-34	54.95	eukaryotic translation initiation factor 1 [Source...	[more]
EIF1B	3.476e-33	54.05	eukaryotic translation initiation factor 1B [Sourc...	[more]
EIF1	1.722e-9	62.22	eukaryotic translation initiation factor 1 [Source...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1


Match Name	E-value	Identity	Description
eif-1	4.776e-33	53.21	Eukaryotic Initiation Factor [Source:UniProtKB/Tr...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1


Match Name	E-value	Identity	Description
eIF1	7.681e-44	59.09	gene:FBgn0035423 transcript:FBtr0073044	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
eif1	7.348e-36	57.66	eukaryotic translation initiation factor 1 [Source...	[more]
eif1b	5.263e-33	54.05	eukaryotic translation initiation factor 1B [Sourc...	[more]
eif1b	5.263e-33	54.05	eukaryotic translation initiation factor 1B [Sourc...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
eif1	1.432e-34	56.76	eukaryotic translation initiation factor 1 [Source...	[more]
eif1b	5.536e-33	54.05	eukaryotic translation initiation factor 1B [Sourc...	[more]
eif1	6.540e-29	58.33	eukaryotic translation initiation factor 1 [Source...	[more]
eif1b	6.932e-29	52.43	eukaryotic translation initiation factor 1B [Sourc...	[more]
eif1b	5.415e-28	52.29	eukaryotic translation initiation factor 1B [Sourc...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Eif1	3.776e-34	54.95	eukaryotic translation initiation factor 1 [Source...	[more]
Eif1b	2.386e-33	54.05	eukaryotic translation initiation factor 1B [Sourc...	[more]
Eif1b	1.979e-29	58.95	eukaryotic translation initiation factor 1B [Sourc...	[more]
Eif1	2.125e-23	60.26	eukaryotic translation initiation factor 1 [Source...	[more]
Eif1	3.355e-17	54.93	eukaryotic translation initiation factor 1 [Source...	[more]

BLAST of Translation initiation factor SUI1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q9VZS3\|ETIF1_DROME	7.699e-43	59.09	Eukaryotic translation initiation factor eIF1 OS=D...	[more]
sp\|P42678\|ETIF1_ANOGA	7.584e-42	58.18	Eukaryotic translation initiation factor eIF1 OS=A...	[more]
sp\|Q755R1\|SUI1_ASHGO	1.951e-38	56.48	Protein translation factor SUI1 OS=Ashbya gossypii...	[more]
sp\|P32911\|SUI1_YEAST	7.274e-38	55.56	Eukaryotic translation initiation factor eIF-1 OS=...	[more]
sp\|P79060\|SUI1_SCHPO	5.489e-36	54.21	Protein translation factor sui1 OS=Schizosaccharom...	[more]

BLAST of Translation initiation factor SUI1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1S8WMB1	2.124e-45	66.67	Translation initiation factor SUI1 OS=Opisthorchis...	[more]
A0A4S2ML60	1.022e-44	65.74	SUI1 domain-containing protein OS=Opisthorchis fel...	[more]
A0A0R3SK57	1.211e-42	62.96	SUI1 domain-containing protein OS=Hymenolepis dimi...	[more]
A0A074Z8E7	6.484e-42	59.50	SUI1 domain-containing protein OS=Opisthorchis viv...	[more]
A0A0X3NX05	6.723e-42	62.96	Protein translation factor SUI1 homolog OS=Schisto...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4


Match Name	E-value	Identity	Description
eif1	2.667e-35	56.76	eukaryotic translation initiation factor 1b-like [...	[more]
eif1b	5.600e-33	54.05	eukaryotic translation initiation factor 1B [Sourc...	[more]
eif1b	4.281e-28	51.92	eukaryotic translation initiation factor 1B [Sourc...	[more]
eif1b	5.281e-28	51.96	eukaryotic translation initiation factor 1B [Sourc...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
eif1	4.594e-39	51.35	eukaryotic translation initiation factor 1 [Source...	[more]
eif1	6.632e-35	55.26	eukaryotic translation initiation factor 1 [Source...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
SUI1	1.048e-39	55.56	Translation initiation factor eIF1; component of a...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO43611	3.787e-36	57.52	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Translation initiation factor SUI1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
eif1	6.887e-35	56.76	eukaryotic translation initiation factor 1b [Sourc...	[more]
eif1	2.777e-13	58.49	eukaryotic translation initiation factor 1b [Sourc...	[more]

BLAST of Translation initiation factor SUI1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000021046.1	9.192e-76	100.00	SMESG000021046.1	[more]
SMESG000069225.1	2.055e-60	75.93	SMESG000069225.1	[more]
SMESG000033176.1	1.063e-50	67.59	SMESG000033176.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30009874 ID=SMED30009874|Name=Translation initiation factor SUI1|organism=Schmidtea mediterranea sexual|type=transcript|length=607bp
GTTAAACTATAAGTGAAAAAATGTGACTAAATCTTTTTAATCTACATTTA
TTCGTTTGTTTTATTAGTTATTCTTTTCGAAATTGTAATATGAGTATTCA
AAATTTACAAACTAAAGATCCATTTGCTGATGTTAAGGAAAATACGGACA
ATGATAGCCAGGTTATTCATGTTAGAGTTCAACAACGTAATGGTAGAAAA
ACCATTACTACCGTTCAAGGTATTCACGAAAAATATGACAAAACAAGAAT
TTTAAAAAGCTTCAAAAAAGAATTTTGCTGTAATGGTACAGTGGTAAAGC
ATGAAGAGTATGGTGAAGTATTGCAATTGCAAGGTGACCAGAGACAAAAA
GTTAAAGACTTTTTAACTGCTAGTCGTTTAGCAACTGAAGATAGCATTCG
CATTCATGGTTTCTAATTTATCATAATAAAGCTTATTTAAATGTCTCATC
ATTTGAAATAGTTATTTCTCTAATCTTTAATAATAGAGAAGTCAGTATTG
AACAAATATATTTTATTTTACTAAGAACATTATTTAATGTTAAGATTTAA
CTGTATGAAATTTAATTTTCATAGATTTCAAGAAAAATTTGGCTTATTTG
TTGTGCT

protein sequence of SMED30009874-orf-1

>SMED30009874-orf-1 ID=SMED30009874-orf-1|Name=SMED30009874-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=109bp
MSIQNLQTKDPFADVKENTDNDSQVIHVRVQQRNGRKTITTVQGIHEKYD
KTRILKSFKKEFCCNGTVVKHEEYGEVLQLQGDQRQKVKDFLTASRLATE
DSIRIHGF*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000429	neoblast
PLANA:0002109	X1 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036877	SUI1_dom_sf
IPR005874	SUI1_euk
IPR001950	SUI1

Vocabulary: **molecular function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **biological process**
Term	Definition
GO:0006413	translational initiation
GO:0001731	formation of translation preinitiation complex
GO:0006412	translation
GO:0006417	regulation of translation
GO:0071456	cellular response to hypoxia

Vocabulary: **cellular component**
Term	Definition
GO:0016282	eukaryotic 43S preinitiation complex
GO:0043614	multi-eIF complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 2..108 e-value: 1.1E-46 score: 155.9
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..108 e-value: 1.6E-46 score: 154.9
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 24..107 e-value: 3.96442E-45 score: 138.822
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 24..95 e-value: 1.8E-25 score: 89.3
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 26..96 score: 22.197
None	No IPR available	GENE3D	G3DSA:3.30.780.10		coord: 1..108 e-value: 1.5E-44 score: 153.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 2..107
None	No IPR available	PANTHER	PTHR10388:SF4	EUKARYOTIC TRANSLATION INITIATION FACTOR EIF1	coord: 2..107
IPR036877	SUI1 domain superfamily	SUPERFAMILY	SSF55159	eIF1-like	coord: 2..108