Polyadenylate-binding protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30009858 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 22Note: Hover over icons to view figure legend
Homology
BLAST of Polyadenylate-binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 138.658 bits (348), Expect = 7.453e-36 Identity = 93/345 (26.96%), Postives = 171/345 (49.57%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQF 1099
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A Q+ + + + + S+D +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ N++ S V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P+ Y Q Q+ G Q Y G+ +P +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQD--HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPQPY--GQWGQWYGNAQQIGQYMPNGWQVPAY 332
BLAST of Polyadenylate-binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 138.658 bits (348), Expect = 7.463e-36 Identity = 93/345 (26.96%), Postives = 173/345 (50.14%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQF 1099
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A Q+ + + + + S+D +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ N++ S V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + ++ +G P+ Y Q Q+ G Q Y G+ +P +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQD--HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKET----------LDMINPVQQNQIGYPQPY--GQWGQWYGNAQQIGQYMPNGWQVPAY 331
BLAST of Polyadenylate-binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 136.346 bits (342), Expect = 4.532e-35 Identity = 94/343 (27.41%), Postives = 168/343 (48.98%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQF 1099
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ N++ S V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P+ Y Q Q+ G Q Y G+ +P +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPQPY--GQWGQWYGNAQQIGQYMPNGWQVPAY 321
BLAST of Polyadenylate-binding protein vs. Ensembl Human
Match: TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:11804]) HSP 1 Score: 127.102 bits (318), Expect = 1.091e-31 Identity = 93/341 (27.27%), Postives = 166/341 (48.68%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPR---KYLAN--QINQYNGRQQPYESYDETGYGLPQ 1096
+T+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+ +A +AI M + +I+ +W K +N +K L E++ N++ V+ G +T +L+ F FG+I I+ FP +F+ + +HESA +AI +NG + + C W ++ K G P+ +Y+AN Q+ Y QP +++ G+G+ Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP---WNQQGFGVDQ 335
BLAST of Polyadenylate-binding protein vs. Ensembl Human
Match: TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:11804]) HSP 1 Score: 119.398 bits (298), Expect = 7.682e-29 Identity = 93/358 (25.98%), Postives = 166/358 (46.37%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA---------------------YVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPR---KYLAN--QINQYNGRQQPYESYDETGYGLPQ 1096
+T+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+ +A +AI M + +I+ +W K +N +K L E++ N++ V+ G +T +L+ F FG+I I+ FP +F+ + +HESA +AI +NG + + C W ++ K G P+ +Y+AN Q+ Y QP +++ G+G+ Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP---WNQQGFGVDQ 352
BLAST of Polyadenylate-binding protein vs. Ensembl Celegans
Match: tiar-2 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q9U2F5]) HSP 1 Score: 120.553 bits (301), Expect = 1.966e-29 Identity = 82/296 (27.70%), Postives = 143/296 (48.31%), Query Frame = 2
Query: 107 SKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT---AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASK------------------NASKTLEEIFNETPKSYTNVFVTG-DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
S++ +T+++++L ++T+E L ++F G + + E A+VEF + N A +L S NG E+ ++ ++ A+ RE + E + +FVG++ +++D T L+ F G + EAK+IRD + K KGYGFV++ +A AID+MN + I+ +W K + + KT +EIFN+ T+V+V N+ ++ + F+ FG I ++ F AF+ + + ESA AI QMN + + CSW
Sbjct: 36 SEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFE------PREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWG 325 HSP 2 Score: 52.373 bits (124), Expect = 4.504e-7 Identity = 53/208 (25.48%), Postives = 88/208 (42.31%), Query Frame = 2
Query: 353 KRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSW-------GKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIKAFPRNNQ------AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
+RE SED P +FV N+ + + L F +G +++AK+I +G + Y FV FS+ +A A+ N ++++ +W G+N+S ET + + +VFV GD + L F FG++ K NN F++Y E A AI +MNG + + +WA +
Sbjct: 26 EREGFQLASGSED--PRTLFVANLDPAITDEFLATLFNQIGAVMKAKII--FEGLNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKP-----------------ETSRHF-HVFV-GDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATR 210
BLAST of Polyadenylate-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 118.242 bits (295), Expect = 7.406e-29 Identity = 79/277 (28.52%), Postives = 140/277 (50.54%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYG------LCVSCSLDPETCTAYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTG-DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
+T+Y+ +L +VTE+ + ++F G + S DP A+VEF + A+ +L +MN + +++++ A E +Q + + +FVG++ ++VD L+ F+ G + +AKVIRD + K KGYGFV++ EA AI++MN + I+ +W K S K+ +EI+N+T T+V+V ++T++ + F FG+I ++ F AF+ + + ++A AI QMN V + CSW
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDP---YAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAV---------EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 310 HSP 2 Score: 70.8626 bits (172), Expect = 5.529e-13 Identity = 54/187 (28.88%), Postives = 87/187 (46.52%), Query Frame = 2
Query: 395 KPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIKAFPRNNQ------AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
+P ++VGN+ + V E + F +G++ + KVI DG + Y FV FS+ +A A+ MN+ D ++K +W AV + SK +T + + +VFV GD V + L F+ FG + + K N F++Y E A AI QMNG + + +WA +
Sbjct: 44 EPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI--FDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNW-------AVEPGQQQSKI------DTTRHF-HVFV-GDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR 213 HSP 3 Score: 61.2326 bits (147), Expect = 6.825e-10 Identity = 54/211 (25.59%), Postives = 90/211 (42.65%), Query Frame = 2
Query: 77 LIDNEM------------SKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYI---EQE----HNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK 631
L+D EM SK+++ +++ L V + L F+ +G + +T T +V + A ++ MNG +G I + A +QE +N K + + S D ++VGNI + ++ I + GF G I E ++ K +GY FV F N+ A AI +MN + ++CSWGK
Sbjct: 109 LLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN--TSVYVGNIASLTEDEI-RQGFASFGRITEVRIF-----KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 311
BLAST of Polyadenylate-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 103.99 bits (258), Expect = 5.085e-24 Identity = 69/270 (25.56%), Postives = 122/270 (45.19%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTG-DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
+T+Y+ +L +VTE+ + ++F G + + + E + N E +Q + + +FVG++ ++VD L+ F+ G + +AKVIRD + K KGYGFV++ EA AI++MN + I+ +W K S K+ +EI+N+T T+V+V ++T++ + F FG+I ++ F AF+ + + ++A AI QMN V + CSW
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVT-------------------------------------KTKVIFDEMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 278 HSP 2 Score: 60.8474 bits (146), Expect = 8.455e-10 Identity = 50/195 (25.64%), Postives = 86/195 (44.10%), Query Frame = 2
Query: 89 EMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYI---EQE----HNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK 631
+ SK+++ +++ L V + L F+ +G + +T T +V + A ++ MNG +G I + A +QE +N K + + S D ++VGNI + ++ I +G F G I E ++ K +GY FV F N+ A AI +MN + ++CSWGK
Sbjct: 93 QQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN--TSVYVGNIASLTEDEIRQG-FASFGRITEVRIF-----KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 279
BLAST of Polyadenylate-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 102.449 bits (254), Expect = 5.410e-24 Identity = 61/198 (30.81%), Postives = 102/198 (51.52%), Query Frame = 2
Query: 335 EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTG-DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
E + N E +Q + + +FVG++ ++VD L+ F+ G + +AKVIRD + K KGYGFV++ EA AI++MN + I+ +W K S K+ +EI+N+T T+V+V ++T++ + F FG+I ++ F AF+ + + ++A AI QMN V + CSW
Sbjct: 10 EMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 207 HSP 2 Score: 60.8474 bits (146), Expect = 4.935e-10 Identity = 54/211 (25.59%), Postives = 90/211 (42.65%), Query Frame = 2
Query: 77 LIDNEM------------SKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYI---EQE----HNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK 631
L+D EM SK+++ +++ L V + L F+ +G + +T T +V + A ++ MNG +G I + A +QE +N K + + S D ++VGNI + ++ I + GF G I E ++ K +GY FV F N+ A AI +MN + ++CSWGK
Sbjct: 6 LLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN--TSVYVGNIASLTEDEI-RQGFASFGRITEVRIF-----KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 208
BLAST of Polyadenylate-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 102.064 bits (253), Expect = 6.482e-24 Identity = 60/194 (30.93%), Postives = 100/194 (51.55%), Query Frame = 2
Query: 347 NIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTG-DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
N E +Q + + +FVG++ ++VD L+ F+ G + +AKVIRD + K KGYGFV++ EA AI++MN + I+ +W K S K+ +EI+N+T T+V+V ++T++ + F FG+I ++ F AF+ + + ++A AI QMN V + CSW
Sbjct: 4 NWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 197 HSP 2 Score: 60.8474 bits (146), Expect = 4.735e-10 Identity = 50/195 (25.64%), Postives = 86/195 (44.10%), Query Frame = 2
Query: 89 EMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYI---EQE----HNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK 631
+ SK+++ +++ L V + L F+ +G + +T T +V + A ++ MNG +G I + A +QE +N K + + S D ++VGNI + ++ I +G F G I E ++ K +GY FV F N+ A AI +MN + ++CSWGK
Sbjct: 12 QQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN--TSVYVGNIASLTEDEIRQG-FASFGRITEVRIF-----KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 198
BLAST of Polyadenylate-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084592) HSP 1 Score: 110.538 bits (275), Expect = 1.002e-25 Identity = 72/302 (23.84%), Postives = 134/302 (44.37%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT---AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ-IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--------------------SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG---DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M+ KT+Y+ +L SV+E+ L+++F G SC + E A++E+ N +A +L+ + ++E+E + +S + D IFVG++ +++ L+ F G I +++RD K KGY FV+F + EA +AI MN + I+ +W K + T EE++N++ + T V+ G + ++ +L+ HF FG I++++ F +FI + + E+A +AI + V+ + C W
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRL----------FLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWG 292 HSP 2 Score: 70.0922 bits (170), Expect = 1.465e-12 Identity = 48/190 (25.26%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIK------AFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
++ +P ++VGN+ + V E +L F +G + K+IR+ + Y F+ +SN A +A+ MN+ F +++IK +W + N + +I S+ ++FV GD + E L F FG+I N + AF+++ A NAI MNG + + + +W+ +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG--NDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN----------QPKTDI-----SSHHHIFV-GDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084594) HSP 1 Score: 110.538 bits (275), Expect = 1.002e-25 Identity = 72/302 (23.84%), Postives = 134/302 (44.37%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT---AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ-IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--------------------SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG---DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M+ KT+Y+ +L SV+E+ L+++F G SC + E A++E+ N +A +L+ + ++E+E + +S + D IFVG++ +++ L+ F G I +++RD K KGY FV+F + EA +AI MN + I+ +W K + T EE++N++ + T V+ G + ++ +L+ HF FG I++++ F +FI + + E+A +AI + V+ + C W
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRL----------FLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWG 292 HSP 2 Score: 70.0922 bits (170), Expect = 1.465e-12 Identity = 48/190 (25.26%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIK------AFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
++ +P ++VGN+ + V E +L F +G + K+IR+ + Y F+ +SN A +A+ MN+ F +++IK +W + N + +I S+ ++FV GD + E L F FG+I N + AF+++ A NAI MNG + + + +W+ +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG--NDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN----------QPKTDI-----SSHHHIFV-GDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333200) HSP 1 Score: 110.153 bits (274), Expect = 1.274e-25 Identity = 72/302 (23.84%), Postives = 134/302 (44.37%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT---AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ-IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--------------------SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG---DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M+ KT+Y+ +L SV+E+ L+++F G SC + E A++E+ N +A +L+ + ++E+E + +S + D IFVG++ +++ L+ F G I +++RD K KGY FV+F + EA +AI MN + I+ +W K + T EE++N++ + T V+ G + ++ +L+ HF FG I++++ F +FI + + E+A +AI + V+ + C W
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRL----------FLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWG 292 HSP 2 Score: 70.0922 bits (170), Expect = 1.671e-12 Identity = 48/190 (25.26%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIK------AFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
++ +P ++VGN+ + V E +L F +G + K+IR+ + Y F+ +SN A +A+ MN+ F +++IK +W + N + +I S+ ++FV GD + E L F FG+I N + AF+++ A NAI MNG + + + +W+ +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG--NDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN----------QPKTDI-----SSHHHIFV-GDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333202) HSP 1 Score: 110.153 bits (274), Expect = 1.274e-25 Identity = 72/302 (23.84%), Postives = 134/302 (44.37%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT---AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ-IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--------------------SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG---DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M+ KT+Y+ +L SV+E+ L+++F G SC + E A++E+ N +A +L+ + ++E+E + +S + D IFVG++ +++ L+ F G I +++RD K KGY FV+F + EA +AI MN + I+ +W K + T EE++N++ + T V+ G + ++ +L+ HF FG I++++ F +FI + + E+A +AI + V+ + C W
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRL----------FLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWG 292 HSP 2 Score: 70.0922 bits (170), Expect = 1.671e-12 Identity = 48/190 (25.26%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIK------AFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
++ +P ++VGN+ + V E +L F +G + K+IR+ + Y F+ +SN A +A+ MN+ F +++IK +W + N + +I S+ ++FV GD + E L F FG+I N + AF+++ A NAI MNG + + + +W+ +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG--NDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN----------QPKTDI-----SSHHHIFV-GDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333201) HSP 1 Score: 110.153 bits (274), Expect = 1.274e-25 Identity = 72/302 (23.84%), Postives = 134/302 (44.37%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT---AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ-IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADG-KHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--------------------SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG---DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M+ KT+Y+ +L SV+E+ L+++F G SC + E A++E+ N +A +L+ + ++E+E + +S + D IFVG++ +++ L+ F G I +++RD K KGY FV+F + EA +AI MN + I+ +W K + T EE++N++ + T V+ G + ++ +L+ HF FG I++++ F +FI + + E+A +AI + V+ + C W
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRL----------FLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWG 292 HSP 2 Score: 70.0922 bits (170), Expect = 1.671e-12 Identity = 48/190 (25.26%), Postives = 88/190 (46.32%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIK------AFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
++ +P ++VGN+ + V E +L F +G + K+IR+ + Y F+ +SN A +A+ MN+ F +++IK +W + N + +I S+ ++FV GD + E L F FG+I N + AF+++ A NAI MNG + + + +W+ +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG--NDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGN----------QPKTDI-----SSHHHIFV-GDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Zebrafish
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 139.043 bits (349), Expect = 1.854e-36 Identity = 87/290 (30.00%), Postives = 150/290 (51.72%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK-----SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
M+ +T+Y+ +L + VTE +L +F G C SC + +T +VEF +N ++A +MNG ++ ++++ A SS K++ S +FVG++ ++ ++ F G I +A+V+RD A GK KGYGF++F N+++A SAI +MN + +I+ +W K SN +SK+ S EE+ N++ S V+ G ++ +L+ F FG+I I+ FP +F+ + SHE A +AI +NG + + C W +T
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAAAALAAMNGRKILGKDMKVNWA--------STPSSQKKDTSNH---FHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLS--YEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKET 279 HSP 2 Score: 65.4698 bits (158), Expect = 4.076e-11 Identity = 53/260 (20.38%), Postives = 108/260 (41.54%), Query Frame = 2
Query: 98 KMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA------YVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIE-----------QEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVA-----SKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAF 808
K ++ N +++ L ++ +D+ + F +G + + T ++ F N+ A +++ MNG +G +I + A + ++ E L Q + +C ++ G I + + + +++ F G I+E +V + KGY FV F + A AI +N T +KC WGK +++ + +N + + + +SY N G V P + V+G+ N + +
Sbjct: 90 KKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCT---VYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQNKPTYAAQPYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGY 341
BLAST of Polyadenylate-binding protein vs. Ensembl Zebrafish
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 137.117 bits (344), Expect = 8.251e-36 Identity = 86/290 (29.66%), Postives = 150/290 (51.72%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK-----SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
M+ +T+Y+ +L + VTE +L +F G C SC + +T +VEF +N ++A +MNG ++ ++++ A SS K++ S +FVG++ ++ ++ F G I +A+V++D A GK KGYGF++F N+++A SAI +MN + +I+ +W K SN +SK+ S EE+ N++ S V+ G ++ +L+ F FG+I I+ FP +F+ + SHE A +AI +NG + + C W +T
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAAAALAAMNGRKILGKDMKVNWA--------STPSSQKKDTSNH---FHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLS--YEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKET 279 HSP 2 Score: 65.4698 bits (158), Expect = 3.896e-11 Identity = 53/260 (20.38%), Postives = 108/260 (41.54%), Query Frame = 2
Query: 98 KMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA------YVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIE-----------QEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVA-----SKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAF 808
K ++ N +++ L ++ +D+ + F +G + + T ++ F N+ A +++ MNG +G +I + A + ++ E L Q + +C ++ G I + + + +++ F G I+E +V + KGY FV F + A AI +N T +KC WGK +++ + +N + + + +SY N G V P + V+G+ N + +
Sbjct: 90 KKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKSNNEGASSKHLSYEEVLNQSSPSNCT---VYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQNKPTYAAQPYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGY 341
BLAST of Polyadenylate-binding protein vs. Ensembl Zebrafish
Match: tial1 (TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]) HSP 1 Score: 134.806 bits (338), Expect = 8.795e-35 Identity = 97/356 (27.25%), Postives = 171/356 (48.03%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQY--NGRQQPY-----ESYDETGYGLPQFQQPSFTDDYTDQ 1135
KT+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ ++ F G I +A+V++D GK KGYGFV+F N+ +A +AI M + +I+ +W K N++K L +E+ N++ V+ G +T+ L+ F FG+I I+ FP +FI + SHESA +AI +NG + + C W ++ K G P++Y QY NG Q P +++++ G+G+ Q Q P++ + Q
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWNQMYGNPQQY-----GQYMTNGWQVPSYGMYGQTWNQQGFGVEQSQSPAWVGGFGTQ 347
BLAST of Polyadenylate-binding protein vs. Ensembl Zebrafish
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]) HSP 1 Score: 131.724 bits (330), Expect = 1.806e-33 Identity = 82/287 (28.57%), Postives = 148/287 (51.57%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
M+ + KT+Y+ +L + VTE ++ +F G C SC + +T +VEF A SL+ MNG ++ +++++ A SS K++ S +FVG++ ++ ++ F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K + A + + +E+ N++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG + + C W +T
Sbjct: 2 MDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA--------TSPSSQKKDTSNHF---HVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKET 277
BLAST of Polyadenylate-binding protein vs. Ensembl Zebrafish
Match: tial1 (TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]) HSP 1 Score: 126.716 bits (317), Expect = 9.524e-32 Identity = 97/375 (25.87%), Postives = 171/375 (45.60%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA-----------------------YVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQY--NGRQQPY-----ESYDETGYGLPQFQQPSFTDDYTDQ 1135
KT+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ ++ F G I +A+V++D GK KGYGFV+F N+ +A +AI M + +I+ +W K N++K L +E+ N++ V+ G +T+ L+ F FG+I I+ FP +FI + SHESA +AI +NG + + C W ++ K G P++Y QY NG Q P +++++ G+G+ Q Q P++ + Q
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEQSDSSRKMNSSSIGFSVLQHTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWNQMYGNPQQY-----GQYMTNGWQVPSYGMYGQTWNQQGFGVEQSQSPAWVGGFGTQ 366
BLAST of Polyadenylate-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 140.198 bits (352), Expect = 2.650e-36 Identity = 85/289 (29.41%), Postives = 148/289 (51.21%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
ME +T+Y+ +L + VTE +L +F G C SC + +T +VEF A SL+ MNG ++ +++++ A Q+ + S + S+D +FVG++ ++ +K F G I +A+V++D GK KGYGFV+F N+++A +AI +M + +I+ +W K + + S T EE+ N++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG + + C W +T
Sbjct: 1 MEEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQD--HFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET 287
BLAST of Polyadenylate-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 138.272 bits (347), Expect = 8.846e-36 Identity = 85/287 (29.62%), Postives = 147/287 (51.22%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
ME +T+Y+ +L + VTE +L +F G C SC + +T +VEF A SL+ MNG ++ +++++ A SS K++A+ +FVG++ ++ +K F G I +A+V++D GK KGYGFV+F N+++A +AI +M + +I+ +W K + + S T EE+ N++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG + + C W +T
Sbjct: 1 MEEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA--------TTPSSQKKDANNHF---HVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET 276
BLAST of Polyadenylate-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 134.42 bits (337), Expect = 2.956e-34 Identity = 82/280 (29.29%), Postives = 143/280 (51.07%), Query Frame = 2
Query: 128 YISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
Y+ +L + VTE +L +F G C SC + +T +VEF A SL+ MNG ++ +++++ A Q+ + S + S+D +FVG++ ++ +K F G I +A+V++D GK KGYGFV+F N+++A +AI +M + +I+ +W K + + S T EE+ N++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG + + C W +T
Sbjct: 19 YVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQD--HFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET 296
BLAST of Polyadenylate-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 133.65 bits (335), Expect = 5.000e-34 Identity = 82/279 (29.39%), Postives = 143/279 (51.25%), Query Frame = 2
Query: 125 IYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
+Y+ +L + VTE +L +F G C SC + +T +VEF A SL+ MNG ++ +++++ A SS K++A+ +FVG++ ++ +K F G I +A+V++D GK KGYGFV+F N+++A +AI +M + +I+ +W K + + S T EE+ N++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG + + C W +T
Sbjct: 11 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA--------TTPSSQKKDANNHF---HVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET 278
BLAST of Polyadenylate-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 126.716 bits (317), Expect = 1.776e-31 Identity = 80/272 (29.41%), Postives = 138/272 (50.74%), Query Frame = 2
Query: 146 KSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK--SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
+ VTE +L +F G C SC + +T +VEF A SL+ MNG ++ +++++ A SS K++A+ +FVG++ ++ +K F G I +A+V++D GK KGYGFV+F N+++A +AI +M + +I+ +W K + + S T EE+ N++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG + + C W +T
Sbjct: 29 RDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA--------TTPSSQKKDANNH---FHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET 289
BLAST of Polyadenylate-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 135.576 bits (340), Expect = 7.176e-35 Identity = 103/406 (25.37%), Postives = 184/406 (45.32%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPF 1282
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A Q+ + + + + S+D +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ +++ + V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P Y Q Q+ G Q Y G+ +P Y P Q +N P + PP GQ L QP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQD--HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPPTY--GQWGQWYGNAQQIGQYVPNGWQVPA---------------YGVYGQPWSQQGFNQTQSSAPWMGPNYSVPPPQGQNGSMLPSQPAGY 378
BLAST of Polyadenylate-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 135.576 bits (340), Expect = 7.916e-35 Identity = 103/406 (25.37%), Postives = 184/406 (45.32%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPF 1282
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A Q+ + + + + S+D +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ +++ + V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P Y Q Q+ G Q Y G+ +P Y P Q +N P + PP GQ L QP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQD--HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPPTY--GQWGQWYGNAQQIGQYVPNGWQVPA---------------YGVYGQPWSQQGFNQTQSSAPWMGPNYSVPPPQGQNGSMLPSQPAGY 378
BLAST of Polyadenylate-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 133.265 bits (334), Expect = 4.175e-34 Identity = 107/407 (26.29%), Postives = 184/407 (45.21%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQ---FQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPF 1282
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ +++ + V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P Y Q Q+ G Q Y G+ +P + QP + P P Y SVP PP GQ L QP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPPTY--GQWGQWYGNAQQIGQYVPNGWQVPAYGVYGQPWSQQGFNQTQSSAPWMGPNY------------SVP------PPQGQNGSMLPSQPAGY 367
BLAST of Polyadenylate-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 133.265 bits (334), Expect = 4.598e-34 Identity = 108/409 (26.41%), Postives = 185/409 (45.23%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA------YVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQ---FQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPF 1282
ME + KT+Y+ +L + VTE +L +F G C +C + + TA +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ +++ + V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P Y Q Q+ G Q Y G+ +P + QP + P P Y SVP PP GQ L QP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPPTY--GQWGQWYGNAQQIGQYVPNGWQVPAYGVYGQPWSQQGFNQTQSSAPWMGPNY------------SVP------PPQGQNGSMLPSQPAGY 369
BLAST of Polyadenylate-binding protein vs. Ensembl Mouse
Match: Tial1 (Tia1 cytotoxic granule-associated RNA binding protein-like 1 [Source:MGI Symbol;Acc:MGI:107913]) HSP 1 Score: 125.176 bits (313), Expect = 3.455e-31 Identity = 92/341 (26.98%), Postives = 165/341 (48.39%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPR---KYLAN--QINQYNGRQQPYESYDETGYGLPQ 1096
+T+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+ +A +AI M + +I+ +W K + +K L E++ N++ V+ G +T +L+ F FG+I I+ FP +F+ + +HESA +AI +NG + + C W ++ K G P+ +Y+AN Q+ Y QP +++ G+G+ Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP---WNQQGFGVDQ 335
BLAST of Polyadenylate-binding protein vs. UniProt/SwissProt
Match: sp|P31483|TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens OX=9606 GN=TIA1 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.579e-35 Identity = 93/345 (26.96%), Postives = 171/345 (49.57%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQF 1099
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A Q+ + + + + S+D +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ N++ S V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P+ Y Q Q+ G Q Y G+ +P +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQD--HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPQPY--GQWGQWYGNAQQIGQYMPNGWQVPAY 332
BLAST of Polyadenylate-binding protein vs. UniProt/SwissProt
Match: sp|P52912|TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.537e-34 Identity = 103/406 (25.37%), Postives = 184/406 (45.32%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYI--EQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPF 1282
ME + KT+Y+ +L + VTE +L +F G C +C + +T +VEF ++ ++A +MNG ++ +++++ A Q+ + + + + S+D +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++ +K L +E+ +++ + V+ G +T++L+ F FG+I I+ FP +F+ + SHESA +AI +NG + + C W +T + +G P Y Q Q+ G Q Y G+ +P Y P Q +N P + PP GQ L QP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQD--HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKET---------LDMINPVQQQNQIGYPPTY--GQWGQWYGNAQQIGQYVPNGWQVPA---------------YGVYGQPWSQQGFNQTQSSAPWMGPNYSVPPPQGQNGSMLPSQPAGY 378
BLAST of Polyadenylate-binding protein vs. UniProt/SwissProt
Match: sp|Q01085|TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.239e-31 Identity = 93/341 (27.27%), Postives = 166/341 (48.68%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPR---KYLAN--QINQYNGRQQPYESYDETGYGLPQ 1096
+T+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+ +A +AI M + +I+ +W K +N +K L E++ N++ V+ G +T +L+ F FG+I I+ FP +F+ + +HESA +AI +NG + + C W ++ K G P+ +Y+AN Q+ Y QP +++ G+G+ Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP---WNQQGFGVDQ 335
BLAST of Polyadenylate-binding protein vs. UniProt/SwissProt
Match: sp|P70318|TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.760e-27 Identity = 92/358 (25.70%), Postives = 165/358 (46.09%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA---------------------YVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPR---KYLAN--QINQYNGRQQPYESYDETGYGLPQ 1096
+T+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+ +A +AI M + +I+ +W K + +K L E++ N++ V+ G +T +L+ F FG+I I+ FP +F+ + +HESA +AI +NG + + C W ++ K G P+ +Y+AN Q+ Y QP +++ G+G+ Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP---WNQQGFGVDQ 352
BLAST of Polyadenylate-binding protein vs. UniProt/SwissProt
Match: sp|Q9M427|UBP1_NICPL (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.595e-21 Identity = 76/299 (25.42%), Postives = 140/299 (46.82%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAY--VE-FDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWG-----------KNKSNLAVVASKNASKTLEEIFNE-TPKS---YTNVFV--TGDNVTKELLEPHFEVFGK--IKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
+S +++Y+ ++ VTE L +F + G C L + ++Y V+ FD ++A +++NG + I+++ AY S+ +++ S IFVG++ +V + L F + +A+V+ D G+ +G+GFV+F N+ EA+SAI+ +N + +I+C+W + ++ + S + E++ NE P++ YT V+V VT L HF G I++++ F+ Y SH A AI N ++ + CSW K
Sbjct: 43 FDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAY---------ASAQREDTSNHYN---IFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNARLLFGKPVKCSWGSK 329
BLAST of Polyadenylate-binding protein vs. TrEMBL
Match: D5JG76 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-2 PE=2 SV=1) HSP 1 Score: 475.322 bits (1222), Expect = 1.002e-161 Identity = 264/471 (56.05%), Postives = 324/471 (68.79%), Query Frame = 2
Query: 86 NEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAY-----IEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLA-NQINQYNGRQQPYES-YDETGYG----LPQFQQPSFTDDYTDQSFYNPVAMPT-------YQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPF-NVQPLMGIPAQPKPRLNRVA-QPFKKPILGNPGKYIG 1438
++MSKME++N KTIYIS LP SVTEEDLLSIFENYGLCVSC L+ E CTAYVEFDNE SA N+LSMNG+EMG T+I+I IAY EQE+ + ++ L + ++D P QIFVGNIG+ VDE IL+GGFEHLG II+ KVIRD DGK KGYGFVTFS+E+EA++AID+MNETFFHDEKIKCSWGKNK+N+ V +KNA ++L++I +ETPKSYTNVFVTG+NVT+E+LEPHF FG IKNIKAFP+NNQ+FINY+SHE+A NAIHQMNGF++NN+EL CSWAIK+EK KK + + PRK+L + +Q YES YD G L QFQQ S T+ Y +Q F+ P ++P Y D+YN F A+ +QSK NVQPLMGI AQPKP LNRVA P++KPIL PGK++
Sbjct: 13 SKMSKMENRNTKTIYISCLPNSVTEEDLLSIFENYGLCVSCELNSEECTAYVEFDNETSARNALSMNGIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLGK--TDDSTPTQIFVGNIGSNVDEAILEGGFEHLGKIIDTKVIRDPDGKPKGYGFVTFSSEFEAKNAIDRMNETFFHDEKIKCSWGKNKTNVTVTLNKNAVRSLQDILSETPKSYTNVFVTGENVTQEMLEPHFVKFGTIKNIKAFPKNNQSFINYYSHEAAANAIHQMNGFLLNNVELKCSWAIKSEKPGKKIKFTRQQQQPP----IKKPRKHLLPKTFSNVTTTRQAYESKYDSGYGGIGGGLSQFQQ-SLTNPYQEQPFH-PYSLPAVYPNEYQYDDNYN--------------------------------FSTARSH---FIQSKSVPNVQPLMGILAQPKPALNRVATNPYRKPILNKPGKFMS 440
BLAST of Polyadenylate-binding protein vs. TrEMBL
Match: D5JG75 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-1 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 3.909e-96 Identity = 189/460 (41.09%), Postives = 249/460 (54.13%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWG-KNK-SNLAVVASK----NASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQ------------FQQPSFTDDYTDQSFYNPVAMPTYQDDYNSY-----------NVYPPSVPAPLIRNPPL-GQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKP 1408
KTIYIS+LP ++EEDLLSIF ++G CVSC L+ ET TAY+EFDNE+SA +L+MN M + ++ + IAY++ +L + + + QIFVG IG +DE ILK GF H G +++ KV+R DG+HKG+ FV+FSNE +A SAI KMN T FH+ KI+C+W KNK SN A K +KTLE+I E P+S T+V+V G+++T+ELL P FE FGKIKN+KAFP N AF+NY +H++A AI Q+NG+ +NNIEL C+W K N + NQY + PY YD T +Q P + ++ SFYNP MP Y N Y N YP + P L GQPK QPK A PK G P +PKPR+NR P+ KP
Sbjct: 1 KTIYISNLPSPISEEDLLSIFGSFGACVSCELNLETLTAYIEFDNESSAEKALAMNNTPMESNQMSVEIAYVDNVVQNVTSYTLASKKVDYSQSVQIFVGGIGFDIDEAILKEGFAHCGQVLDTKVVRSNDGQHKGFAFVSFSNESDANSAIQKMNNTMFHNRKIQCNWATKNKNSNGAPFNPKFNPTKFNKTLEDISYEAPESNTSVYVLGESLTEELLRPIFERFGKIKNVKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINNIELKCNWGKK---------------------NAALGNANNQSMGNQYGNQMNPY--YDNTQANFYNYQQQFDQYYQAGYQVPQYFNNTQMGSFYNP--MPNYPQFQNPYGGQQNFINPNQNNYPAPNQGNFVAQPNLLGQPKGSYGAQPKNNFKAGPK----------------GFPGEPKPRMNRAPHPYNKP 419
BLAST of Polyadenylate-binding protein vs. TrEMBL
Match: A4V6J5 (Polyadenylate-binding protein (Fragment) OS=Dugesia japonica OX=6161 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.495e-93 Identity = 141/207 (68.12%), Postives = 170/207 (82.13%), Query Frame = 2
Query: 89 EMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAY-----IEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIF 694
EMSKME++N KTIYIS LP SVTEEDLLSIFENYGLCVSC L+ E CTAYVEFDNE SA N+LSMNG+EMG T+I+I IAY EQE+ + ++ L + ++D P QIFVGNIG+ VDE IL+GGFEHLG II+ KVIRD DGK KGYGFVTFS+E+EA++AID+MNETFFHDEKIKCSWGKNK+N+ V +KNA ++L++I
Sbjct: 4 EMSKMENRNTKTIYISCLPNSVTEEDLLSIFENYGLCVSCELNSEECTAYVEFDNETSARNALSMNGIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLGK--TDDSTPTQIFVGNIGSNVDEAILEGGFEHLGKIIDTKVIRDPDGKPKGYGFVTFSSEFEAKNAIDRMNETFFHDEKIKCSWGKNKTNVTVTLNKNAVRSLQDIL 208
BLAST of Polyadenylate-binding protein vs. TrEMBL
Match: D5JG77 (TIA1-like protein OS=Dugesia japonica OX=6161 GN=TIAL-3 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.081e-59 Identity = 103/280 (36.79%), Postives = 170/280 (60.71%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPE-TCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M KN +TIY+ +LP +V ++ L+ IF N+G C+SC + + +C A++E+ + +SA+ +LS M+G+ M +I+++ + + +++ + QIFVG+IG VDE +LK GF G +I+AKV+R DG+ +G+ FV+FSN EA AI M++T+FH+ IKC+W K + E ++ E P + TNV+V G+N+T+ELL HF+ FG+I ++K +P AFIN+ +HE+A AI Q +G+ +N+ + C+W
Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSAMDGIYMWNNQIKVN--WSSGPSAVPGPAAVASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAGENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWG 278 HSP 2 Score: 62.7734 bits (151), Expect = 5.184e-7 Identity = 45/184 (24.46%), Postives = 87/184 (47.28%), Query Frame = 2
Query: 407 IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTN---VFV--TGDNVTKELLEPHFEVFGKIKNIKA--FPRNNQ---AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
I+VGN+ V++ +L F + G I +IRD + Y F+ +++ A A+ M+ + + +IK +W S + A+ ++K Y+N +FV G +V + +L+ F FG++ + K +P AF+++ + + A AI M+ +N + C+WA +
Sbjct: 9 IYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSAMDGIYMWNNQIKVNWSSGPSAVPGPAAVASAKI----------DYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATR 182
BLAST of Polyadenylate-binding protein vs. TrEMBL
Match: D5JG78 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-4 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.825e-52 Identity = 103/283 (36.40%), Postives = 169/283 (59.72%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPE-TCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASED-CKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M+ +N +TIY+ +LP ++T+ LL IF N+G CV C + + +C A++E+ N ++A+ +L+ M+G+ M +I+++ + + + SSL D QIFVG+IG VDE +LK GF G +++AKV+R DG+ +G+ FV FS +A AI+KM++T+FH+ IKC+W K + E ++ E P + TNV++ G + +T+EL+ HFE FG+I +K +P AFIN+ +HESA AI Q +G+ +N+ + C+W
Sbjct: 1 MDIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAASLALAAMDGIFMWNNQIKVNWSSGNSVNTVA--SSLPSSNKIDYSNTIQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNWATRNGLDGDQFIKYTPRPYELVYKEAPLTNTNVYIAGIPEGLTEELIRVHFEEFGRIDAVKVYPEKAHAFINFVTHESAARAISQRHGYKINDNVIKCNWG 281
BLAST of Polyadenylate-binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 135.191 bits (339), Expect = 3.098e-35 Identity = 86/290 (29.66%), Postives = 148/290 (51.03%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK-----SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
M+ KT+Y+ +L + VTE +L +F G C SC + +T +VEF A +L +MNG ++ ++++ A + SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGF++F N+++A +AI +MN + +I+ +W K SN +K+ S EE+ +++ S V+ G +T +L+ F FG+I I+ FP +F+ + SHE A +AI +NG + + C W +T
Sbjct: 2 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWASMP--------SSQKKDTSNH---FHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYETGNTKHLS--YEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKET 278 HSP 2 Score: 66.6254 bits (161), Expect = 1.284e-11 Identity = 53/259 (20.46%), Postives = 108/259 (41.70%), Query Frame = 2
Query: 98 KMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA------YVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIE-----------QEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKT----LEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAF 808
K ++ N +++ L ++ +D+ + F +G + + T ++ F N+ A N++ MNG +G +I + A + ++ E L Q + +C ++ G + + + + +++ F G I+E +V D KGY FV F + A AI +N T +KC WGK +++ + ++ + + + +SY N G V P + V+G+ N + +
Sbjct: 89 KKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYETGNTKHLSYEEVLSQSSPSNCT---VYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPD-----KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMPMPQSNPGYAAQPYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGY 339
BLAST of Polyadenylate-binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 135.191 bits (339), Expect = 3.098e-35 Identity = 86/290 (29.66%), Postives = 148/290 (51.03%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK-----SNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
M+ KT+Y+ +L + VTE +L +F G C SC + +T +VEF A +L +MNG ++ ++++ A + SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGF++F N+++A +AI +MN + +I+ +W K SN +K+ S EE+ +++ S V+ G +T +L+ F FG+I I+ FP +F+ + SHE A +AI +NG + + C W +T
Sbjct: 2 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWASMP--------SSQKKDTSNH---FHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYETGNTKHLS--YEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKET 278 HSP 2 Score: 66.6254 bits (161), Expect = 1.284e-11 Identity = 53/259 (20.46%), Postives = 108/259 (41.70%), Query Frame = 2
Query: 98 KMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTA------YVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIE-----------QEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKT----LEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAF 808
K ++ N +++ L ++ +D+ + F +G + + T ++ F N+ A N++ MNG +G +I + A + ++ E L Q + +C ++ G + + + + +++ F G I+E +V D KGY FV F + A AI +N T +KC WGK +++ + ++ + + + +SY N G V P + V+G+ N + +
Sbjct: 89 KKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYETGNTKHLSYEEVLSQSSPSNCT---VYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPD-----KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMPMPQSNPGYAAQPYGQWGQSYGNGQQMGQYVPNGWQMPTYGVYGQAWNQQGY 339
BLAST of Polyadenylate-binding protein vs. Ensembl Cavefish
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:103030475]) HSP 1 Score: 128.642 bits (322), Expect = 1.950e-32 Identity = 98/365 (26.85%), Postives = 178/365 (48.77%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK-------SNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT---EKSXXXXXXXXXXXXXXXXANV-GAPRKYLANQINQYNGRQQPY-----ESYDETGYGLPQFQQPSFTDDYTDQ 1135
KT+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ ++ ++ F G I +A+V++D GK KGYGFV+F N+ +A +AI M + +I+ +W K + +A +SK L E++ N++ V+ G +++ L+ F FG+I I+ FP +FI + SHESA +AI +NG + + + C W ++ KS++ + V G P++Y Q NG Q P +++++ G+G+ Q Q P++ + Q
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNH---FHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDSKQIAHLGSSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLIRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIESHIVKCYWGKESPDMAKSVQPVTEQVDYGQWGHWNQVYGNPQQY--GQYMTTNGWQLPSYGMYGQTWNQQGFGVEQSQSPAWMGGFGTQ 359
BLAST of Polyadenylate-binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 110.538 bits (275), Expect = 1.029e-26 Identity = 73/255 (28.63%), Postives = 130/255 (50.98%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFIN 835
M+ KT+Y+ +L + VTE +L +F G C SC + +T +VEF A +L +MNG ++ ++++ A + SS K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGF++F N+++A +AI +MN + +I+ +W K ++ +K L EE+ +++ S V+ G +T +L+ F FG+I I+ FP +F+
Sbjct: 1 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWASMP--------SSQKKDTSNH---FHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPAPKSNYESNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVR 244 HSP 2 Score: 56.9954 bits (136), Expect = 1.295e-8 Identity = 49/190 (25.79%), Postives = 84/190 (44.21%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKI------KNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
+D +P ++VGN+ V E ++ F +G K+I D G + Y FV F A +A+ MN + +K +W S+ K+ S ++ +VFV GD ++ + ++ F FGKI K++ FI++ + A NAI QMNG + ++ +WA +
Sbjct: 2 DDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAG-NDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWASMPSS----QKKDTS------------NHFHVFV-GDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Cavefish
Match: ENSAMXT00000035946.1 (polyadenylate-binding protein 1-like [Source:NCBI gene;Acc:103030422]) HSP 1 Score: 90.1225 bits (222), Expect = 9.002e-19 Identity = 71/284 (25.00%), Postives = 126/284 (44.37%), Query Frame = 2
Query: 125 IYISSLPKSVTEEDLLSIFENYGLCVSCSL--DPETCTAY--VEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSY--TNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQA----FINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEK 937
I+I +L KS+ + L F +G +SC + D Y V F+ +A ++ MNG+ + K+ + +E RE+ + A E +++ N G +D+ LK F G + +V+ D GK KG+GFV+F +A+ A+D+MN + +++ + K + E++ + Y N++V D + E L F FG I + K ++ F+ + S E A A+ +MNG +V L + A + E+
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKE----REAEMGARAKEFTN---VYIKNFGEDMDDEKLKDVFGKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKELNGKQVYVGRAQKKGE----RQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373 HSP 2 Score: 61.6178 bits (148), Expect = 1.043e-9 Identity = 46/176 (26.14%), Postives = 76/176 (43.18%), Query Frame = 2
Query: 401 AQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHK-GYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK-----NKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQA----FINYFSHESAGNAIHQMNGFVVNN 898
A ++VG++ V E +L F G I+ +V RD + GY +V F +A A+D MN ++ W + KS + + KN K++ DN + L F FG I + K N + F+++ +HE+A AI +MNG ++N+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI------------------DN---KALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLND 165
BLAST of Polyadenylate-binding protein vs. Ensembl Sea Lamprey
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 105.145 bits (261), Expect = 6.799e-26 Identity = 65/236 (27.54%), Postives = 115/236 (48.73%), Query Frame = 2
Query: 407 IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQF 1099
+FVG++ ++ L+ F G I +A+V++D A GK KGYGFV+F + +A +AI +M + +I+ +W K + K L EE+ N++ + V+ G +T++L+ F +FG+I I+ FP +FI + +HESA +AI +NG + + C W + + + + VG ++ Y G QQ Y+ + G+ +PQ+
Sbjct: 5 VFVGDLSPEISTDDLRAAFAPFGKISDARVVKDLATGKSKGYGFVSFFQKLDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKGSQDTDPKHLSFEEVLNQSSPTNCTVYCGGITQGLTEQLMRQTFLLFGQILEIRVFPDKGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKEASDP--------VNQFQQQFSQVGYTQQPWTQWGPWYGGSQQ-YQQFINNGWQVPQY 231
BLAST of Polyadenylate-binding protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]) HSP 1 Score: 80.8777 bits (198), Expect = 1.494e-16 Identity = 67/288 (23.26%), Postives = 125/288 (43.40%), Query Frame = 2
Query: 125 IYISSLPKSVTEEDLLSIFENYGLCVSCSL--DPETCTAY--VEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ----IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSY--TNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQA----FINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEK 937
++I +L KS+ + + F +G +SC + D Y V F+ + +A+ ++ MNG+ + + + + R S K+ E A+ +++ N G +DE L+ F G + V+ D GK +G+GFV+F +A+ A+++MN + + + K + E + E Y N++V DN+ E L F +G I + K ++ F+ + S E A A+ +MNG +V + L + A + E+
Sbjct: 101 VFIKNLDKSIDNKAMYDTFSAFGNILSCKVVCDENGSRGYGFVHFETQEAADRAIEKMNGMLLNDR--------LARRRFVGRFKSRKEREQEMGARAKEFTNVYIKNFGDDMDEDKLREFFGKFGKALSVCVMSDECGKSRGFGFVSFEQHEDAQRAVNEMNGKELNGRTVFVGRAQKKGERQA----ELKRKFEMLKQERISRYQGVNLYVKNLDDNIDDEQLRKEFAPYGTITSTKVMSEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEE 376 HSP 2 Score: 56.9954 bits (136), Expect = 5.633e-9 Identity = 45/176 (25.57%), Postives = 76/176 (43.18%), Query Frame = 2
Query: 401 AQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHK-GYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK-----NKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQA----FINYFSHESAGNAIHQMNGFVVNN 898
A ++VG++ V E +L F G ++ +V RD + GY +V F +A A+D MN + I+ W + KS + V KN K++ DN + + F FG I + K N + F+++ + E+A AI +MNG ++N+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI------------------DN---KAMYDTFSAFGNILSCKVVCDENGSRGYGFVHFETQEAADRAIEKMNGMLLND 165
BLAST of Polyadenylate-binding protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]) HSP 1 Score: 80.4925 bits (197), Expect = 1.714e-16 Identity = 62/245 (25.31%), Postives = 113/245 (46.12%), Query Frame = 2
Query: 233 AYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFE-HLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSY--TNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQA----FINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEK 937
+V F+ + +A+ ++ MNG+ + K+ + +E RE+ +A E +++ N G +D+ L+ FE ++G + KV+ D GK KG+GFV+F +A+ A+D+MN + I + K+ + E + E Y N++V DN+ E L F FG I + K ++ F+ + S E A A+ +MNG ++ + L + A + E+
Sbjct: 1 GFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKE----REAEFGAKAREFTN---VYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQKKAE----RQTELKRKFEMLKQERMSKYQGVNLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVTEMNGRIIGSKPLYVALAQRKEE 234
BLAST of Polyadenylate-binding protein vs. Ensembl Sea Lamprey
Match: sf3b4 (splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]) HSP 1 Score: 67.3958 bits (163), Expect = 2.586e-12 Identity = 50/189 (26.46%), Postives = 86/189 (45.50%), Query Frame = 2
Query: 104 ESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEA-KVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSN 643
E T+Y+ L V+E L +F G V+ + + T +VEF E A+ ++ MN +++ I ++ A HN + A IF+GN+ T++DE +L F G I++ K +RD + G KGY F+ F++ + +AI+ MN + + I S+ K +
Sbjct: 8 ERNQDATVYVGGLDDKVSEALLWELFLQAGPVVNTHMPKDRITQQHQGYGFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKA---SAHNKNLDVG-----------ANIFIGNLDTEIDEKLLYDTFSAFGVILQTPKTMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPISVSYAFKKDS 182 HSP 2 Score: 61.2326 bits (147), Expect = 1.967e-10 Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 2
Query: 383 SEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFV--TGDNVTKELLEPHFEVFGKIKNIKAFPRNNQ-------AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTE 934
SE + A ++VG + KV E +L F G ++ + +D +H+GYGFV F E +A AI MN + + I+ N A +KN N+F+ + ++LL F FG I R+ + AFIN+ S E++ AI MNG + N ++ S+A K +
Sbjct: 7 SERNQDATVYVGGLDDKVSEALLWELFLQAGPVVNTHMPKDRITQQHQGYGFVEFLGEEDADYAIKIMNMIKLYGKPIRV-------NKASAHNKNLDVG------------ANIFIGNLDTEIDEKLLYDTFSAFGVILQTPKTMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPISVSYAFKKD 181
BLAST of Polyadenylate-binding protein vs. Ensembl Sea Lamprey
Match: RBM39 (RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923]) HSP 1 Score: 66.2402 bits (160), Expect = 6.124e-12 Identity = 40/168 (23.81%), Postives = 80/168 (47.62%), Query Frame = 2
Query: 104 ESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMN 586
E ++ +T++ L + DL F G + + + AY+EF +S + ++ + G + I + + E+ ++ P +++VG++ + E +LKG FE G I +++ D+D G+ +GYGFVTF++ AR A++++N
Sbjct: 154 EERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEVDSVSLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAATMQKSTAGPMRLYVGSLHFNITEDMLKGIFEPFGKIENCQLMMDSDTGRSRGYGFVTFADAECARKALEQLN 321
BLAST of Polyadenylate-binding protein vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]) HSP 1 Score: 85.8853 bits (211), Expect = 2.776e-18 Identity = 77/287 (26.83%), Postives = 121/287 (42.16%), Query Frame = 2
Query: 122 TIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDN--VTKELLEPHFEVFGKI----------KNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
++Y+ L SV+E L IF G S + + T AYV F++ + ++ ++ T I+ + I +R+ SL+++ S IF+ N+ +D L F G I+ +K+ D +GK KG+GFV F E A+ AID +N + ++I VA + K + ET YTN++V N T E + F FG I +K F F+NY HE A A+ +N +N +L A K
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWS---QRDPSLRKKGS-----GNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI------------YVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF-----GFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQK 296 HSP 2 Score: 72.7886 bits (177), Expect = 4.184e-14 Identity = 72/306 (23.53%), Postives = 138/306 (45.10%), Query Frame = 2
Query: 59 CE*MINLIDNEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPE-----TCTAYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKS-NLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQ-----AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTE 934
C M + D + K S N I+I +L + + L F +G +S + + +V F+ E +A ++ ++NG+ + +I ++ +E R+S L++ + ++V NI ++ + + F G I+ A + +DADGK KG+GFV + +A A++ +N++ + EK+ + K+ + V+ + + LE++ N+FV D+V E LE F +G I + K N F+ + + E A AI + N +V L + A + +
Sbjct: 109 CRIMWSQRDPSLRKKGSGN---IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKE----RDSQLEETKAHYTN---LYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKM---AKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKD 401 HSP 3 Score: 52.373 bits (124), Expect = 1.017e-7 Identity = 51/212 (24.06%), Postives = 87/212 (41.04%), Query Frame = 2
Query: 314 EISIAYIEQEHNIKRESSLKQEA------SEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHK-GYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQ-----AFINYFSHESAGNAIHQMNGFVVNNIEL 907
+I+ EQ N+ + KQ A S + A ++VG++ V E L F +G++ +V RDA K GY +V F++ R AI+++N T + W + +L K N+F+ ++ + L F VFG I + K N F+++ +A AI +NG ++N E+
Sbjct: 3 DITDKTAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSL------------------RKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 196
BLAST of Polyadenylate-binding protein vs. Ensembl Yeast
Match: PUB1 (Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; human homolog Tia1 is critical for normal synaptic plasticity; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004961]) HSP 1 Score: 68.5514 bits (166), Expect = 6.827e-13 Identity = 44/191 (23.04%), Postives = 95/191 (49.74%), Query Frame = 2
Query: 86 NEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSL-----DPETCTAYVEFDNENSANNSL-SMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK 637
N ++ + + +Y+ +L K++TE+ L F+ G + + + A+VE+ + AN +L ++NG ++ ++I+ A+ Q Q +S+D +FVG++ VD+ L+ F+ + + V+ D G +GYGFV+F+++ +A++A+D M + ++ +W +
Sbjct: 64 NAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQ-----------QSSSDDT--FNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241 HSP 2 Score: 55.8398 bits (133), Expect = 7.096e-9 Identity = 47/185 (25.41%), Postives = 83/185 (44.86%), Query Frame = 2
Query: 407 IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVF-----GKIK-NIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTE 934
++VGN+ + E ILK F+ G I K++ D + K+ Y FV + ++A A+ +N + +K +W A ++ + ++ F N+FV GD NV E L F+ F G + +++ F+++ S + A NA+ M G +N L +WA K +
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW----------AFQSQQSSSDDTF--------NLFV-GDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRD 242
BLAST of Polyadenylate-binding protein vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 62.7734 bits (151), Expect = 4.101e-11 Identity = 50/187 (26.74%), Postives = 87/187 (46.52%), Query Frame = 2
Query: 371 KQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVI--RDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKIKNIK--AFPRNNQ----AFINYFSHESAGNAIHQMNGFVVNN 898
KQ+ E +PA IFVG + +D+ LK FEH+G +I A+VI R D + +GYG+V F N+ A AI +M I C +K + + +K F +TP ++ G+ N ++ + F G++ +++ P Q ++ + + E A A+ + G ++N
Sbjct: 158 KQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTD-RSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKP----AGNNDRAKK----FGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDN 335 HSP 2 Score: 49.6766 bits (117), Expect = 6.920e-7 Identity = 41/182 (22.53%), Postives = 81/182 (44.51%), Query Frame = 2
Query: 104 ESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKH-KGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSW 625
E++ TI++ L S+ +E L FE+ G + + E T YV+F+N++ A ++ M G E+ I ++ + N R SE +F+GN+ D + F G ++ ++ + + KG+G+V FSN +A+ A+D + + + ++ +
Sbjct: 163 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSD--TLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDF 342
BLAST of Polyadenylate-binding protein vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 57.3806 bits (137), Expect = 2.916e-9 Identity = 52/184 (28.26%), Postives = 86/184 (46.74%), Query Frame = 2
Query: 89 EMSKME-SKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSL--DPETCTA----YVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIK 616
E SK + SK ++I L TE++L F YG + DP T + ++ F+ +S + E+ T+ + I+ + I R+ E K +IFVG IG V + F GTII+A+++ D D G+ +G+GFVT Y++ A+D++ + F D K +
Sbjct: 148 ERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD--------EVVKTQHILDGKVIDPKRAIPRD--------EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVT----YDSADAVDRVCQNKFIDFKDR 311
BLAST of Polyadenylate-binding protein vs. Ensembl Yeast
Match: NAM8 (RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function [Source:SGD;Acc:S000001128]) HSP 1 Score: 52.373 bits (124), Expect = 9.067e-8 Identity = 69/286 (24.13%), Postives = 116/286 (40.56%), Query Frame = 2
Query: 233 AYVEFDNENSANNSLSMNGV---EMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGF-EHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCS--------------WGKNKSNL--AVVASKNASKTLEEIFNE---------------------------TPKSYTNVFVTGDN--VTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKS 940
+V+F + A N+L NG+ K++++ A ++ +++K + +C IFVG++ V E+ L F + AK++ D G KGYGFV F+N E + A+ +M F + IK + ++ S+L V S+ SK + N T + T VF+ G + VT++ L +F+ FG I +K F+ Y SA AI M GF + N + SW +++
Sbjct: 109 CFVDFPSSTHAANALLKNGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVK--SGNNCS---IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSAKQT 389
BLAST of Polyadenylate-binding protein vs. Ensembl Nematostella
Match: EDO33206 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSV8]) HSP 1 Score: 83.1889 bits (204), Expect = 6.003e-17 Identity = 62/282 (21.99%), Postives = 124/282 (43.97%), Query Frame = 2
Query: 125 IYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT-----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQ-----AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEK 937
I+I +L KS+ + L F +G +SC + + +V F+ E++A +++ ++G+ + K+ + + ++ +++ ++ K ++V N G +D+ +K G I+ KV+ D +GK KG+GFV+F EA A++ +N ++ K ++ A K +E N + D + E L F +G I + K + F+ + S E A A+ +MNG ++ + L + A + E+
Sbjct: 103 IFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVG-------RWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREE 377 HSP 2 Score: 65.855 bits (159), Expect = 1.858e-11 Identity = 48/177 (27.12%), Postives = 88/177 (49.72%), Query Frame = 2
Query: 89 EMSKMESKNKK--TIYISSLPKSVTEEDLLSIFENYGLCVSCSL--DPETCT---AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQ---IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMN 586
+ KM ++ KK +Y+ + + +E + I G VS + DPE + +V F+ A +++ +NG E+G ++ A E + ++ ++++ E Q +++ N+ +D+ L+ F GTI AKV++D G KG+GFV FS+ EA A+ +MN
Sbjct: 182 RIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 358 HSP 3 Score: 47.7506 bits (112), Expect = 7.988e-6 Identity = 41/186 (22.04%), Postives = 81/186 (43.55%), Query Frame = 2
Query: 401 AQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHK-GYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGK-----NKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCS-WAIKTEK 937
A ++VG++ V E +L F G+++ +V RD + GY +V F A A+D MN + W + KS + + KN K+++ KS + F N+ + ++ N K + F+++ + ++A AI +++G ++N+ ++ W K E+
Sbjct: 13 ASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTMNFDPIKGRPCRIMWQQRDPSLRKSGVGNIFIKNLDKSIDN------KSLYDTFSAFGNILSCKIAQD-----ELGNPKGY-----GFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKER 182
BLAST of Polyadenylate-binding protein vs. Ensembl Nematostella
Match: EDO34879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN30]) HSP 1 Score: 77.0258 bits (188), Expect = 1.735e-15 Identity = 49/184 (26.63%), Postives = 88/184 (47.83%), Query Frame = 2
Query: 92 MSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCS 622
M S + + I+ +P S+++ED+ IF G SC L + T A+V +DN + AN ++ MNG + +++S A + +S + K A +++ + + E ++ F+ G II +KV++D G+ +G GFV F EA++AID +N +K +
Sbjct: 1 MENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFA---------------RPSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLT 169
BLAST of Polyadenylate-binding protein vs. Ensembl Nematostella
Match: EDO32492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUY1]) HSP 1 Score: 74.3294 bits (181), Expect = 3.437e-15 Identity = 66/246 (26.83%), Postives = 111/246 (45.12%), Query Frame = 2
Query: 128 YISSLPKSVTEEDLLSIFENYGLCVSC----SLDPETCTAYVEFDNENSANNS-LSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSN---LAVVASKNASKTLEEIFNETPKSYTNVFVTGD--NVTKELLEPHFEVFGKIKNIKAFPRNNQAFI 832
Y+ +L T+E + SIF V C S+ + +VEF+ A + M+ + K++++ A +KR + IFVG++ VD +L+ FE G I E +V++D A K KG+GFV+F +A AI +M+ +++K +W K+N V KN +++F+++ + T V+V +V L+ F +G I K F AFI
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINSVSYKGPYCFVEFETHADAQEAKFRMDQRTVMDKKLKVNWA--TNHPGMKRGDTNNH--------FHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYVCVKNL--LWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFI 234
BLAST of Polyadenylate-binding protein vs. Ensembl Nematostella
Match: EDO42417 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1S3]) HSP 1 Score: 67.0106 bits (162), Expect = 4.236e-12 Identity = 50/187 (26.74%), Postives = 88/187 (47.06%), Query Frame = 2
Query: 104 ESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEA-KVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNK 637
E TIY+ L + V+E + +F G V+ + + T +VEF E A+ ++ MN +++ I ++ A HN + A +F+GN+ T+VDE +L F G I++ K++RD+D G KG+ F+ F++ + +AI+ MN + + I S+ K
Sbjct: 8 ERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKA---SAHNKNLDVG-----------ANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 180 HSP 2 Score: 57.7658 bits (138), Expect = 4.202e-9 Identity = 54/194 (27.84%), Postives = 84/194 (43.30%), Query Frame = 2
Query: 383 SEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGK-HKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFV--TGDNVTKELLEPHFEVFGKIKNIKAFPRNNQ-------AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTE 934
+E + A I+VG + KV E ++ F G ++ + +D + H+GYGFV F E +A AI MN + + I+ N A +KN N+F+ V ++LL F FG I R++ AFIN+ S +++ AI MNG + N + S+A K E
Sbjct: 7 AERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRV-------NKASAHNKNLDVG------------ANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKE 181
BLAST of Polyadenylate-binding protein vs. Ensembl Nematostella
Match: EDO33926 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQW0]) HSP 1 Score: 66.6254 bits (161), Expect = 8.106e-12 Identity = 40/168 (23.81%), Postives = 83/168 (49.40%), Query Frame = 2
Query: 104 ESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT------AYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDAD-GKHKGYGFVTFSNEYEARSAIDKMN 586
E K+++T++ L +++ DL F G + + + AY+EF ++++ ++ ++G ++ I + + E+ LKQ P +++VG++ + E ++K FE GT+ ++I D++ + KGYGFV F A+ A+++MN
Sbjct: 114 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQP----LGPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMN 277
BLAST of Polyadenylate-binding protein vs. Ensembl Medaka
Match: ENSORLT00000019582.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101158614]) HSP 1 Score: 139.043 bits (349), Expect = 2.927e-36 Identity = 84/287 (29.27%), Postives = 151/287 (52.61%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKT 931
ME +T+Y+ +L + VTE +L +F G C SC + +T +VEF D+ ++A + +MNG ++ +++++ A +S K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI M + +I+ +W K ++ SK L EE+ +++ S V+ G +T++L+ F FG+I ++ FP +F+ + SHESA +AI +NG ++ + C W +T
Sbjct: 1 MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWA--------TTPTSQKKDTSNHF---HVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKET 276
BLAST of Polyadenylate-binding protein vs. Ensembl Medaka
Match: ENSORLT00000003147.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101155125]) HSP 1 Score: 133.65 bits (335), Expect = 2.808e-34 Identity = 93/343 (27.11%), Postives = 169/343 (49.27%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQF 1099
M+ + KT+Y+ +L + VTE +L +F G C SC + +T +VEF A +++ MNG ++ +++++ A +S K++ S +FVG++ ++ +K F G I + +V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++SK L +E+ N++ S V+ G +T++++ F FG+I I+ FP +F+ + SHE+A +AI +NG + + C W +T ++ PI P ++ + P NQ Q+ G Q Y G+ +P +
Sbjct: 1 MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWA--------TTPTSQKKDTSSHF---HVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVQGPIQQVPMAQQSTLGFAAQPY----NQWGQWYGNTQQIGQYVPNGWQVPSY 328
BLAST of Polyadenylate-binding protein vs. Ensembl Medaka
Match: ENSORLT00000019586.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101158614]) HSP 1 Score: 117.857 bits (294), Expect = 1.389e-29 Identity = 76/276 (27.54%), Postives = 141/276 (51.09%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNN 898
ME +T+Y+ +L + VTE +L +F G C SC + +T +VEF D+ ++A + +MNG ++ +++++ A +S K++ S +FVG++ ++ +K F G I +A+V++D A GK KGYGFV+F N+++A +AI M + +I+ +W K ++ SK L EE+ +++ S V+ G +T++L+ F FG+I ++ FP +F++ S+ +NG ++ N
Sbjct: 1 MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWA--------TTPTSQKKDTSNHF---HVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVSAISNGGVMEPTQGLNGSMLAN 265 HSP 2 Score: 56.6102 bits (135), Expect = 1.844e-8 Identity = 47/190 (24.74%), Postives = 84/190 (44.21%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKI------KNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
ED +P ++VGN+ V E ++ F +G K+I D G Y FV F + A +++ MN +++K +W ++ K+ S ++ +VFV GD +T E ++ F FG+I K++ F+++F+ A NAI M G + ++ +WA +
Sbjct: 2 EDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDP-YCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWATTPTS----QKKDTS------------NHFHVFV-GDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATR 173
BLAST of Polyadenylate-binding protein vs. Ensembl Medaka
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:101155294]) HSP 1 Score: 118.242 bits (295), Expect = 7.819e-29 Identity = 78/278 (28.06%), Postives = 138/278 (49.64%), Query Frame = 2
Query: 119 KTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEF-DNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
+T+Y+ +L + VTE +L +F G C SC + E + +VEF ++ ++A +MNG ++ +++++ A SS K++ S +FVG++ + ++ F G I +A+V++D GK KGYGFV+F N+ +A +AI M + +I+ +W K + SK L EE+ ++ V+ G +++ L+ F FG+I I+ FP +FI + SH+SA +AI +NG + + C W
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWA--------TTPSSQKKDTSNHF---HVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWG 274
BLAST of Polyadenylate-binding protein vs. Ensembl Medaka
Match: ENSORLT00000003149.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101155125]) HSP 1 Score: 110.538 bits (275), Expect = 6.628e-27 Identity = 75/276 (27.17%), Postives = 138/276 (50.00%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRD-ADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTL--EEIFNETPKSYTNVFVTG--DNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNN 898
M+ + KT+Y+ +L + VTE +L +F G C SC + +T +VEF A +++ MNG ++ +++++ A +S K++ S +FVG++ ++ +K F G I + +V++D A GK KGYGFV+F N+++A +AI +M + +I+ +W K ++SK L +E+ N++ S V+ G +T++++ F FG+I I+ FP +F++ G + NG V+ N
Sbjct: 1 MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWA--------TTPTSQKKDTSSH---FHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVSNGGMVEPGQGV---NGTVLTN 262 HSP 2 Score: 60.4622 bits (145), Expect = 9.508e-10 Identity = 50/190 (26.32%), Postives = 84/190 (44.21%), Query Frame = 2
Query: 386 EDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGD---NVTKELLEPHFEVFGKI------KNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
+D +P ++VGN+ V E ++ F +G K+I D G H Y FV F A + I MN +++K +W ++ K+ S S+ +VFV GD +T + ++ F FGKI K++ F+++F+ A NAI QM G + ++ +WA +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAG-HDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWATTPTS----QKKDTS------------SHFHVFV-GDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 173
BLAST of Polyadenylate-binding protein vs. Planmine SMEST
Match: SMESG000044671.1 (SMESG000044671.1) HSP 1 Score: 904.82 bits (2337), Expect = 0.000e+0 Identity = 457/460 (99.35%), Postives = 457/460 (99.35%), Query Frame = 2
Query: 68 MINLIDNEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKYIGKNQ 1447
MINLIDNEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQE SEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSIKK ILPPPPMRKMRIANVGA RKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKYIGKNQ
Sbjct: 1 MINLIDNEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQETSEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSIKKLILPPPPMRKMRIANVGATRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKYIGKNQ 460
BLAST of Polyadenylate-binding protein vs. Planmine SMEST
Match: SMESG000044671.1 (SMESG000044671.1) HSP 1 Score: 888.641 bits (2295), Expect = 0.000e+0 Identity = 449/452 (99.34%), Postives = 449/452 (99.34%), Query Frame = 2
Query: 92 MSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKYIGKNQ 1447
MSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQE SEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSIKK ILPPPPMRKMRIANVGA RKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKYIGKNQ
Sbjct: 1 MSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQETSEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSIKKLILPPPPMRKMRIANVGATRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPKPYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKYIGKNQ 452
BLAST of Polyadenylate-binding protein vs. Planmine SMEST
Match: SMESG000044649.1 (SMESG000044649.1) HSP 1 Score: 312.768 bits (800), Expect = 6.954e-102 Identity = 188/456 (41.23%), Postives = 261/456 (57.24%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWG-KNKSNLAV-----VASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSXXXXXXXXXXXXXXXXANVGAPRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDYNSYNVYPPSVPAPLIRNPP-----LGQPKPYLNVQPKPFGPAQPK-PYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKY 1432
MESKN KTIY+S+LP ++EEDLLSIF ++G+C+SC L+ ET +AY+EFDNE SA +L+MN M + ++ + IAY+E+ N + + + P QIFVG IG +DE LK GF H G +I+AKV+R DG+HKG+ FV+FSNE EA +AI MN T FH+ KI+C+W K+K+ V +A ++KTLEEI E P++ T+V+V +N+++++L P FE FGKIKNIKAFP N AF+NY +H++A AI Q+NG+ +N+IEL C+W K A G K + NQ+NQY Q ++D Q+ QP+F + FYN M +Y YNS Y P P P + P P+ QP G QPK YG P I +Q KPR+NR P+ KP + N ++
Sbjct: 1 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQN-SAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEASAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN------------------AAAGGNMNKPMGNQMNQYYDNSQ--ANFDNYQQQYDQYCQPNF---FQVPQFYNNSQMGSY---YNSAPNY-PQYPMPYFQQQPNSNANFSNPQGNFIAQPNLLG--QPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQF 426
BLAST of Polyadenylate-binding protein vs. Planmine SMEST
Match: SMESG000055074.1 (SMESG000055074.1) HSP 1 Score: 207.223 bits (526), Expect = 1.725e-62 Identity = 104/280 (37.14%), Postives = 169/280 (60.36%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPE-TCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M KN +TIY+ +LP +V ++ L+ IF N+G C+SC + + +C A++E+ + SA+ +LS M+G+ M +I+++ + I +++ + QIFVG+IG VDE +LK GF G +I+AKV+R DG+ +G+ FV+FSN EA AI M++T+FH+ IKC+W K + E ++ E P + TNV+V G+N+T+ELL HF+ FG+I ++K +P AFIN+ +HE+A AI Q +G+ +N+ + C+W
Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVN--WSSGPSTIPGPAAVTSAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAGENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWG 278 HSP 2 Score: 64.3142 bits (155), Expect = 5.130e-11 Identity = 45/184 (24.46%), Postives = 87/184 (47.28%), Query Frame = 2
Query: 407 IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTN---VFV--TGDNVTKELLEPHFEVFGKIKNIKA--FPRNNQ---AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
I+VGN+ V++ +L F + G I +IRD + Y F+ +++ A A+ M+ + + +IK +W S + A+ ++K Y+N +FV G +V + +L+ F FG++ + K +P AF+++ + + A AI M+ +N + C+WA +
Sbjct: 9 IYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVNWSSGPSTIPGPAAVTSAKI----------DYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATR 182
BLAST of Polyadenylate-binding protein vs. Planmine SMEST
Match: SMESG000055075.1 (SMESG000055075.1) HSP 1 Score: 207.223 bits (526), Expect = 2.015e-62 Identity = 104/280 (37.14%), Postives = 169/280 (60.36%), Query Frame = 2
Query: 101 MESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPE-TCT----AYVEFDNENSANNSLS-MNGVEMGTTKIEISIAYIEQEHNIKRESSLKQEASEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWA 922
M KN +TIY+ +LP +V ++ L+ IF N+G C+SC + + +C A++E+ + SA+ +LS M+G+ M +I+++ + I +++ + QIFVG+IG VDE +LK GF G +I+AKV+R DG+ +G+ FV+FSN EA AI M++T+FH+ IKC+W K + E ++ E P + TNV+V G+N+T+ELL HF+ FG+I ++K +P AFIN+ +HE+A AI Q +G+ +N+ + C+W
Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVN--WSSGPSTIPGPAAVTSAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAGENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWG 278 HSP 2 Score: 63.929 bits (154), Expect = 6.307e-11 Identity = 45/184 (24.46%), Postives = 87/184 (47.28%), Query Frame = 2
Query: 407 IFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWGKNKSNLAVVASKNASKTLEEIFNETPKSYTN---VFV--TGDNVTKELLEPHFEVFGKIKNIKA--FPRNNQ---AFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIK 928
I+VGN+ V++ +L F + G I +IRD + Y F+ +++ A A+ M+ + + +IK +W S + A+ ++K Y+N +FV G +V + +L+ F FG++ + K +P AF+++ + + A AI M+ +N + C+WA +
Sbjct: 9 IYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVNWSSGPSTIPGPAAVTSAKI----------DYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATR 182 The following BLAST results are available for this feature:
BLAST of Polyadenylate-binding protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Polyadenylate-binding protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Polyadenylate-binding protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30009858 ID=SMED30009858|Name=Polyadenylate-binding protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1509bpback to top protein sequence of SMED30009858-orf-1 >SMED30009858-orf-1 ID=SMED30009858-orf-1|Name=SMED30009858-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=461bp MINLIDNEMSKMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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