SCAN box domain-containing protein

Overview
NameSCAN box domain-containing protein
Smed IDSMED30009806
Length (bp)3206
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SCAN box domain-containing protein (SMED30009806) t-SNE clustered cells

Violin plots show distribution of expression levels for SCAN box domain-containing protein (SMED30009806) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SCAN box domain-containing protein (SMED30009806) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SCAN box domain-containing protein (SMED30009806) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30009806

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30009806 SmedASXL_033582SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30009806 SmedASXL_073859SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30009806SMESG000014733.1 SMESG000014734.1 Contig39421newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30009806SMESG000014733.1 SMESG000014734.1 Contig39421uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
nervous systemSMED30009806 dd_Smed_v4_16040_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30009806 dd_Smed_v4_16040_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30009806 dd_Smed_v4_16040_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30009806 dd_Smed_v4_16040_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Human
Match: ERCC6 (ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438])

HSP 1 Score: 85.1149 bits (209), Expect = 9.006e-34
Identity = 72/248 (29.03%), Postives = 121/248 (48.79%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS-DGVLVMKWTDNKEVSLMSNF*STAIKT---ARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWISVTVNNSYQLMRKNGTKLSQ*------DFIE---HLVLFYCKSYGKSSQQGRKISSKLTDI-VRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
            FFTSI+L+++L+  G+ A GT R++   + P+     LK+K RG+ D+R    G +V +W DN  V++ S+     I       + +++ KK +    PN+ K       M  +  +   +I+K      G       W S  +   ++L+ +N  +L +       DF+E    +V  Y +++G   + G+K   +  +I  RYDG N++IV+  K   C  C    +F C KCDV LH +C   YH
Sbjct:  354 FFTSIALLDKLSSMGHQATGTVRKDHIDRVPLESDVALKKKERGTFDYRIDGKGNIVCRWNDNSVVTVASS--GAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQF--MGGV-DRADENIDKYRASIRGKK-----WYSSPLLFCFELVLQNAWQLHKTYDEKPVDFLEFRRRVVCHYLETHGHPPEPGQKGRPQKRNIDSRYDGINHVIVKQGKQTRCAECHKNTTFRCEKCDVALHVKCSVEYH 591

HSP 2 Score: 80.8777 bits (198), Expect = 9.006e-34
Identity = 61/187 (32.62%), Postives = 100/187 (53.48%), Query Frame = 3 
Query: 1098 ENPQDYFELFYDETLFELMLRESNLCDVQK--------NELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLL-SNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQY 1628
              P +  ELF D+ + EL+++ SNL    K        +E K F+  +  ++  +VS  +  ++ +W  +  V  +L S +M+RD F  I  +LH  DN  +   D+ SK++PLI  L ++ +K+   E +   DE M+PYF +H  K+F+ GKPIRF YK     +   Y+  F  Y GKN + ++
Sbjct:  140 RTPTEILELFLDDEVIELIVKYSNLYACSKGVHLGLTSSEFKCFLGII--FLSGYVS--VPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANLDPVDKFSKLRPLISKLNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYKFWCGATCLGYICWFQPYQGKNPNTKH 322
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Human
Match: ERCC6 (ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438])

HSP 1 Score: 84.3445 bits (207), Expect = 6.587e-33
Identity = 72/245 (29.39%), Postives = 120/245 (48.98%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS-DGVLVMKWTDNKEVSLMSNF*STAIKT---ARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEK-ECVKRSGGGR*CPIWI--SVTVNNSYQLMRKNGTKLSQ*DFIE---HLVLFYCKSYGKSSQQGRKISSKLTDI-VRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
            FFTSI+L+++L+  G+ A GT R++   + P+     LK+K RG+ D+R    G +V +W DN  V++ S+     I       + +++ KK +    PN+ K       M  +  +   +I+K     R       P+     + + N++QL +    K    DF+E    +V  Y +++G   + G+K   +  +I  RYDG N++IV+  K   C  C    +F C KCDV LH +C   YH
Sbjct:  822 FFTSIALLDKLSSMGHQATGTVRKDHIDRVPLESDVALKKKERGTFDYRIDGKGNIVCRWNDNSVVTVASS--GAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQF--MGGV-DRADENIDKYRASIRGKKWYSSPLLFCFELVLQNAWQLHKTYDEKPV--DFLEFRRRVVCHYLETHGHPPEPGQKGRPQKRNIDSRYDGINHVIVKQGKQTRCAECHKNTTFRCEKCDVALHVKCSVEYH 1059

HSP 2 Score: 78.5666 bits (192), Expect = 6.587e-33
Identity = 61/186 (32.80%), Postives = 100/186 (53.76%), Query Frame = 3 
Query: 1101 NPQDYFELFYDETLFELMLRESNLCDVQK--------NELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLL-SNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQY 1628
             P +  ELF D+ + EL+++ SNL    K        +E K F+  +  ++  +VS  +  ++ +W  +  V  +L S +M+RD F  I  +LH  DN  +   D+ SK++PLI  L ++ +K+   E +   DE M+PYF +H  K+F+ GKPIRF YK     +   Y+  F  Y GKN + ++
Sbjct:  609 TPTEILELFLDDEVIELIVKYSNLYACSKGVHLGLTSSEFKCFLGII--FLSGYVS--VPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANLDPVDKFSKLRPLISKLNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYKFWCGATCLGYICWFQPYQGKNPNTKH 790
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Human
Match: ERCC6 (ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438])

HSP 1 Score: 84.3445 bits (207), Expect = 6.587e-33
Identity = 72/245 (29.39%), Postives = 120/245 (48.98%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS-DGVLVMKWTDNKEVSLMSNF*STAIKT---ARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEK-ECVKRSGGGR*CPIWI--SVTVNNSYQLMRKNGTKLSQ*DFIE---HLVLFYCKSYGKSSQQGRKISSKLTDI-VRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
            FFTSI+L+++L+  G+ A GT R++   + P+     LK+K RG+ D+R    G +V +W DN  V++ S+     I       + +++ KK +    PN+ K       M  +  +   +I+K     R       P+     + + N++QL +    K    DF+E    +V  Y +++G   + G+K   +  +I  RYDG N++IV+  K   C  C    +F C KCDV LH +C   YH
Sbjct:  822 FFTSIALLDKLSSMGHQATGTVRKDHIDRVPLESDVALKKKERGTFDYRIDGKGNIVCRWNDNSVVTVASS--GAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQF--MGGV-DRADENIDKYRASIRGKKWYSSPLLFCFELVLQNAWQLHKTYDEKPV--DFLEFRRRVVCHYLETHGHPPEPGQKGRPQKRNIDSRYDGINHVIVKQGKQTRCAECHKNTTFRCEKCDVALHVKCSVEYH 1059

HSP 2 Score: 78.5666 bits (192), Expect = 6.587e-33
Identity = 61/186 (32.80%), Postives = 100/186 (53.76%), Query Frame = 3 
Query: 1101 NPQDYFELFYDETLFELMLRESNLCDVQK--------NELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLL-SNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQY 1628
             P +  ELF D+ + EL+++ SNL    K        +E K F+  +  ++  +VS  +  ++ +W  +  V  +L S +M+RD F  I  +LH  DN  +   D+ SK++PLI  L ++ +K+   E +   DE M+PYF +H  K+F+ GKPIRF YK     +   Y+  F  Y GKN + ++
Sbjct:  609 TPTEILELFLDDEVIELIVKYSNLYACSKGVHLGLTSSEFKCFLGII--FLSGYVS--VPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANLDPVDKFSKLRPLISKLNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYKFWCGATCLGYICWFQPYQGKNPNTKH 790
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Human
Match: PGBD2 (piggyBac transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:19399])

HSP 1 Score: 93.2041 bits (230), Expect = 1.371e-31
Identity = 77/265 (29.06%), Postives = 122/265 (46.04%), Query Frame = 2 
Query: 1688 QLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRT--SDGVLVMKWTDNKEVSLMSNF*STAIKTARK*NRQD---KKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIW--------ISVTVNNSYQLMRK--NGTKLSQ*DFIEHLVLFYCKSYGKSSQQGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYHM 2437
             +F DK          FTS+ LM  L  +G  A GT RE RT +CP+ +   LK+  RGS D++   S+ ++V +W D+  V++ SN  +  I+  R  +R     K     H P++ K   L  +      ++  +I K  VK  G       W        I   +NN++QL R      ++    F  ++   Y +S   ++ QGR+ S +L    R+D   + I+  DK   C LC  + +  C KC  G+H +CF  YH+
Sbjct:  347 HIFFDK---------VFTSVKLMSILRKKGVKATGTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSN--AVGIEPVRLTSRHSGAAKTRTQVHQPSLVK---LYQEKVGGVGRMDQNIAKYKVKIRGMK-----WYSSFIGYVIDAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRR-SRRLETESRFDMIGHWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHI 591

HSP 2 Score: 65.4698 bits (158), Expect = 1.371e-31
Identity = 80/286 (27.97%), Postives = 127/286 (44.41%), Query Frame = 3 
Query:  819 IYLGLPEVNELSDGDSDRSDEEVVGLSEKASHLL*TDAHVATM-EPDDIYDDNQEALHSNAKR------KVNRRWLKKSRE*PFHQEWNGGSMLSKASSAE-NPQDYFELFYDETLFELMLRESNLCDVQKN--------ELKVFIEGVH*WIIS-FVSL*IT*QKTYWA----SKYHVSKLLSNSMQRD-CXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKM-CAMCSNGNYLHSFDLYLG 1607
            I++  P+       D D  DE+    S++ +HL  +  H + + E     +DN +     AK+      K  R W K+     F         +    S E +P   FELF+DE     ++ E+N    QKN        ELK  + G+   I+S ++S     ++ +W     S +H   L++++++RD   L   +     +N +  SDR +K++PLI  +   F K+  LEE     ESM  YF     K+   GKP+R  YK+ C   S G YL  F+   G
Sbjct:   42 IFIAPPDNAAGEFTDEDSGDED----SQRGAHLPGSVLHASVLCEDSGTGEDNDDLELQPAKKRQKAVVKPQRIWTKRDIRPDFGSWTASDPHIEDLKSQELSPVGLFELFFDEGTINFIVNETNRYAWQKNVNLSLTAQELKCVL-GI--LILSGYISY--PRRRMFWETSPDSHHH---LVADAIRRDRFELIFSYLHFADNNELDASDRFAKVRPLIIRMNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRG-YLVWFEPSQG 314
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Human
Match: PGBD1 (piggyBac transposable element derived 1 [Source:HGNC Symbol;Acc:HGNC:19398])

HSP 1 Score: 68.5514 bits (166), Expect = 7.134e-22
Identity = 72/249 (28.92%), Postives = 123/249 (49.40%), Query Frame = 3 
Query:  957 DIYDDNQEALHSNAKR-KVN----RRWLKKSRE*PFHQEWNG--GSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN-ELKVFIEGVH*WIISFVSL*IT*------QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            D+  DN+  +    K+ KV+    + W K+  + P    W+     +L+  S   NP + FELF+D+  F L++ E+N    QKN  L+V ++ +      F  L ++       ++ YW        L+ ++++RD F  I  +LHF DN  +   D+ +K++PLI  + K F+ Y  LEE+   D+SM   F      +F+ GKPIR  YK+    +   YL  F+ Y  +  +++ +  P+ G  G
Sbjct:  364 DVEKDNEPEIQPAQKKLKVSCFPEKSWTKRDIK-PNFPSWSALDSGLLNLKSEKLNPVELFELFFDDETFNLIVNETNNYASQKNVSLEVTVQEMR---CVFGVLLLSGFMRHPRREMYWEVSDTDQNLVRDAIRRDRFELIFSNLHFADNGHLDQKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMCECFD---SDQFLNGKPIRIGYKIWCGTTTQGYLVWFEPY-QEESTMKVDEDPDLGLGG 604

HSP 2 Score: 56.9954 bits (136), Expect = 7.134e-22
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 2 
Query: 1691 LFLDKNDTRYSLI--TFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDG--VLVMKWTDNKEVSLMSN 1942
            + L++    Y L   +FFTS+ L+  L  +G  A GT RENRT KCP+     +K+  RG  DFR  +   +++ +W  +  +SL SN
Sbjct:  613 VLLERGQYPYHLCFDSFFTSVKLLSALKKKGVRATGTIRENRTEKCPLMNVEHMKKMKRGYFDFRIEENNEIILCRWYGDGIISLCSN 700

HSP 3 Score: 20.0162 bits (40), Expect = 7.134e-22
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 1 
Query: 1990 QKIVELPQPECFQNYNARMGYVDVMDQGLSTYXXXXXXXXXXXPIVSYL 2136
            ++I ++ QP   + Y+     V  MDQ +S YR R+R KKW+  +VSY+
Sbjct:  718 EEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRIRSKKWYSILVSYM 766
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Zebrafish
Match: CABZ01069162.1 (pep scaffold:GRCz11:KN149950.1:74:5493:1 gene:ENSDARG00000115161.1 transcript:ENSDART00000191202.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CABZ01069162.1)

HSP 1 Score: 48.1358 bits (113), Expect = 1.793e-10
Identity = 25/71 (35.21%), Postives = 37/71 (52.11%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMSNF 1945
            F+TS  L  +L  +  +A GT R NR G   +    L +  PRGS  +   D +L ++W D +EV + S F
Sbjct:  443 FYTSPKLFRDLLSKRIYACGTIRPNRIGFPKMATNKLPQDAPRGSMRWIREDDLLFVEWKDTREVLMCSTF 513

HSP 2 Score: 38.5058 bits (88), Expect = 1.793e-10
Identity = 24/80 (30.00%), Postives = 42/80 (52.50%), Query Frame = 3 
Query: 1383 DRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMC-SNGNYLHSFDLYLGKNDS 1619
            DR  KIKPL D+++     +    +++ IDE M+   ++   K+++  KP ++ YK+  +  S   Y   F +Y GK  S
Sbjct:  334 DRLGKIKPLYDNIRDACRAFYHPGQNISIDERMVASKARSGLKQYMKNKPTKWGYKLFVLADSQCGYTSEFFVYEGKRMS 413
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Zebrafish
Match: si:dkey-19f4.2 (si:dkey-19f4.2 [Source:ZFIN;Acc:ZDB-GENE-121214-262])

HSP 1 Score: 43.5134 bits (101), Expect = 3.997e-8
Identity = 28/97 (28.87%), Postives = 45/97 (46.39%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMSNF*STAIKTARK*NRQDKKLLSYHNPNV 2023
            F+TS  L  +L   G+ A GT +++R       +  L  + PRGS  +   + +L +KW D +EVS+ S             N  DK+  S+   N+
Sbjct:  351 FYTSPKLFRDLYASGFVACGTFKDSRKNVRETKQNALTSRSPRGSIRWIRQNKLLFVKWMDTREVSVCSTIHKAFDGDTVTRNVHDKETGSWQIKNI 447

HSP 2 Score: 35.039 bits (79), Expect = 3.997e-8
Identity = 21/89 (23.60%), Postives = 43/89 (48.31%), Query Frame = 3 
Query: 1395 KIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGN-YLHSFDLYLGK-----NDSVQYNIIPN 1643
            ++KPL   ++          + + IDE M+   +K   K+++  KPI++  K+  +  + N Y   F +Y GK     +  + Y+++ N
Sbjct:  245 RLKPLYITIKDTCKSMWQPRKQIAIDERMVATKAKIALKQYMKAKPIKWGVKLFVLADSSNGYTSDFTIYTGKSRFTSSQGLPYDVVSN 333
[Close]
BLAST of SCAN box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8N328|PGBD3_HUMAN (PiggyBac transposable element-derived protein 3 OS=Homo sapiens OX=9606 GN=PGBD3 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 4.003e-33
Identity = 72/248 (29.03%), Postives = 121/248 (48.79%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS-DGVLVMKWTDNKEVSLMSNF*STAIKT---ARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWISVTVNNSYQLMRKNGTKLSQ*------DFIE---HLVLFYCKSYGKSSQQGRKISSKLTDI-VRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
            FFTSI+L+++L+  G+ A GT R++   + P+     LK+K RG+ D+R    G +V +W DN  V++ S+     I       + +++ KK +    PN+ K       M  +  +   +I+K      G       W S  +   ++L+ +N  +L +       DF+E    +V  Y +++G   + G+K   +  +I  RYDG N++IV+  K   C  C    +F C KCDV LH +C   YH
Sbjct:  354 FFTSIALLDKLSSMGHQATGTVRKDHIDRVPLESDVALKKKERGTFDYRIDGKGNIVCRWNDNSVVTVASS--GAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQF--MGGV-DRADENIDKYRASIRGKK-----WYSSPLLFCFELVLQNAWQLHKTYDEKPVDFLEFRRRVVCHYLETHGHPPEPGQKGRPQKRNIDSRYDGINHVIVKQGKQTRCAECHKNTTFRCEKCDVALHVKCSVEYH 591

HSP 2 Score: 80.8777 bits (198), Expect = 4.003e-33
Identity = 61/187 (32.62%), Postives = 100/187 (53.48%), Query Frame = 3 
Query: 1098 ENPQDYFELFYDETLFELMLRESNLCDVQK--------NELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLL-SNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQY 1628
              P +  ELF D+ + EL+++ SNL    K        +E K F+  +  ++  +VS  +  ++ +W  +  V  +L S +M+RD F  I  +LH  DN  +   D+ SK++PLI  L ++ +K+   E +   DE M+PYF +H  K+F+ GKPIRF YK     +   Y+  F  Y GKN + ++
Sbjct:  140 RTPTEILELFLDDEVIELIVKYSNLYACSKGVHLGLTSSEFKCFLGII--FLSGYVS--VPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANLDPVDKFSKLRPLISKLNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYKFWCGATCLGYICWFQPYQGKNPNTKH 322
[Close]
BLAST of SCAN box domain-containing protein vs. UniProt/SwissProt
Match: sp|P0DP91|ERPG3_HUMAN (Chimeric ERCC6-PGBD3 protein OS=Homo sapiens OX=9606 GN=ERCC6 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.928e-32
Identity = 72/245 (29.39%), Postives = 120/245 (48.98%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS-DGVLVMKWTDNKEVSLMSNF*STAIKT---ARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEK-ECVKRSGGGR*CPIWI--SVTVNNSYQLMRKNGTKLSQ*DFIE---HLVLFYCKSYGKSSQQGRKISSKLTDI-VRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
            FFTSI+L+++L+  G+ A GT R++   + P+     LK+K RG+ D+R    G +V +W DN  V++ S+     I       + +++ KK +    PN+ K       M  +  +   +I+K     R       P+     + + N++QL +    K    DF+E    +V  Y +++G   + G+K   +  +I  RYDG N++IV+  K   C  C    +F C KCDV LH +C   YH
Sbjct:  822 FFTSIALLDKLSSMGHQATGTVRKDHIDRVPLESDVALKKKERGTFDYRIDGKGNIVCRWNDNSVVTVASS--GAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQF--MGGV-DRADENIDKYRASIRGKKWYSSPLLFCFELVLQNAWQLHKTYDEKPV--DFLEFRRRVVCHYLETHGHPPEPGQKGRPQKRNIDSRYDGINHVIVKQGKQTRCAECHKNTTFRCEKCDVALHVKCSVEYH 1059

HSP 2 Score: 78.5666 bits (192), Expect = 2.928e-32
Identity = 61/186 (32.80%), Postives = 100/186 (53.76%), Query Frame = 3 
Query: 1101 NPQDYFELFYDETLFELMLRESNLCDVQK--------NELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLL-SNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQY 1628
             P +  ELF D+ + EL+++ SNL    K        +E K F+  +  ++  +VS  +  ++ +W  +  V  +L S +M+RD F  I  +LH  DN  +   D+ SK++PLI  L ++ +K+   E +   DE M+PYF +H  K+F+ GKPIRF YK     +   Y+  F  Y GKN + ++
Sbjct:  609 TPTEILELFLDDEVIELIVKYSNLYACSKGVHLGLTSSEFKCFLGII--FLSGYVS--VPRRRMFWEQRTDVHNVLVSAAMRRDRFETIFSNLHVADNANLDPVDKFSKLRPLISKLNERCMKFVPNETYFSFDEFMVPYFGRHGCKQFIRGKPIRFGYKFWCGATCLGYICWFQPYQGKNPNTKH 790
[Close]
BLAST of SCAN box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q6P3X8|PGBD2_HUMAN (PiggyBac transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=PGBD2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.094e-31
Identity = 77/265 (29.06%), Postives = 122/265 (46.04%), Query Frame = 2 
Query: 1688 QLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRT--SDGVLVMKWTDNKEVSLMSNF*STAIKTARK*NRQD---KKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIW--------ISVTVNNSYQLMRK--NGTKLSQ*DFIEHLVLFYCKSYGKSSQQGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYHM 2437
             +F DK          FTS+ LM  L  +G  A GT RE RT +CP+ +   LK+  RGS D++   S+ ++V +W D+  V++ SN  +  I+  R  +R     K     H P++ K   L  +      ++  +I K  VK  G       W        I   +NN++QL R      ++    F  ++   Y +S   ++ QGR+ S +L    R+D   + I+  DK   C LC  + +  C KC  G+H +CF  YH+
Sbjct:  347 HIFFDK---------VFTSVKLMSILRKKGVKATGTVREYRTERCPLKDPKELKKMKRGSFDYKVDESEEIIVCRWHDSSVVNICSN--AVGIEPVRLTSRHSGAAKTRTQVHQPSLVK---LYQEKVGGVGRMDQNIAKYKVKIRGMK-----WYSSFIGYVIDAALNNAWQLHRICCQDAQVDLLAFRRYIACVYLESNADTTSQGRR-SRRLETESRFDMIGHWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFREYHI 591

HSP 2 Score: 65.4698 bits (158), Expect = 6.094e-31
Identity = 80/286 (27.97%), Postives = 127/286 (44.41%), Query Frame = 3 
Query:  819 IYLGLPEVNELSDGDSDRSDEEVVGLSEKASHLL*TDAHVATM-EPDDIYDDNQEALHSNAKR------KVNRRWLKKSRE*PFHQEWNGGSMLSKASSAE-NPQDYFELFYDETLFELMLRESNLCDVQKN--------ELKVFIEGVH*WIIS-FVSL*IT*QKTYWA----SKYHVSKLLSNSMQRD-CXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKM-CAMCSNGNYLHSFDLYLG 1607
            I++  P+       D D  DE+    S++ +HL  +  H + + E     +DN +     AK+      K  R W K+     F         +    S E +P   FELF+DE     ++ E+N    QKN        ELK  + G+   I+S ++S     ++ +W     S +H   L++++++RD   L   +     +N +  SDR +K++PLI  +   F K+  LEE     ESM  YF     K+   GKP+R  YK+ C   S G YL  F+   G
Sbjct:   42 IFIAPPDNAAGEFTDEDSGDED----SQRGAHLPGSVLHASVLCEDSGTGEDNDDLELQPAKKRQKAVVKPQRIWTKRDIRPDFGSWTASDPHIEDLKSQELSPVGLFELFFDEGTINFIVNETNRYAWQKNVNLSLTAQELKCVL-GI--LILSGYISY--PRRRMFWETSPDSHHH---LVADAIRRDRFELIFSYLHFADNNELDASDRFAKVRPLIIRMNCNFQKHAPLEEFYSFGESMCEYFGHRGSKQLHRGKPVRLGYKIWCGTTSRG-YLVWFEPSQG 314
[Close]
BLAST of SCAN box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96JS3|PGBD1_HUMAN (PiggyBac transposable element-derived protein 1 OS=Homo sapiens OX=9606 GN=PGBD1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-21
Identity = 72/249 (28.92%), Postives = 123/249 (49.40%), Query Frame = 3 
Query:  957 DIYDDNQEALHSNAKR-KVN----RRWLKKSRE*PFHQEWNG--GSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN-ELKVFIEGVH*WIISFVSL*IT*------QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            D+  DN+  +    K+ KV+    + W K+  + P    W+     +L+  S   NP + FELF+D+  F L++ E+N    QKN  L+V ++ +      F  L ++       ++ YW        L+ ++++RD F  I  +LHF DN  +   D+ +K++PLI  + K F+ Y  LEE+   D+SM   F      +F+ GKPIR  YK+    +   YL  F+ Y  +  +++ +  P+ G  G
Sbjct:  364 DVEKDNEPEIQPAQKKLKVSCFPEKSWTKRDIK-PNFPSWSALDSGLLNLKSEKLNPVELFELFFDDETFNLIVNETNNYASQKNVSLEVTVQEMR---CVFGVLLLSGFMRHPRREMYWEVSDTDQNLVRDAIRRDRFELIFSNLHFADNGHLDQKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMCECFD---SDQFLNGKPIRIGYKIWCGTTTQGYLVWFEPY-QEESTMKVDEDPDLGLGG 604

HSP 2 Score: 56.9954 bits (136), Expect = 3.173e-21
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 2 
Query: 1691 LFLDKNDTRYSLI--TFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDG--VLVMKWTDNKEVSLMSN 1942
            + L++    Y L   +FFTS+ L+  L  +G  A GT RENRT KCP+     +K+  RG  DFR  +   +++ +W  +  +SL SN
Sbjct:  613 VLLERGQYPYHLCFDSFFTSVKLLSALKKKGVRATGTIRENRTEKCPLMNVEHMKKMKRGYFDFRIEENNEIILCRWYGDGIISLCSN 700

HSP 3 Score: 20.0162 bits (40), Expect = 3.173e-21
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 1 
Query: 1990 QKIVELPQPECFQNYNARMGYVDVMDQGLSTYXXXXXXXXXXXPIVSYL 2136
            ++I ++ QP   + Y+     V  MDQ +S YR R+R KKW+  +VSY+
Sbjct:  718 EEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRIRSKKWYSILVSYM 766
[Close]
BLAST of SCAN box domain-containing protein vs. TrEMBL
Match: A0A1B6IFK5 (DDE_Tnp_1_7 domain-containing protein (Fragment) OS=Homalodisca liturata OX=320908 GN=g.27599 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.136e-48
Identity = 76/242 (31.40%), Postives = 124/242 (51.24%), Query Frame = 2 
Query: 1730 TFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMSNF*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWI---SVTVNNSYQLMRKNGTK---LSQ-*DFIEHLVLFYCKSYGKSSQQGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
             FFTS+ L+  L    Y   GT R +RT +CP+     +K + RGS DFR S+ V++++W DN  V+ ++NF + ++  A + +R+ +  +    P VF +         L  +          +R       PI++    V V+N++ L +K   K   + Q   F  +L L   K +GK S QG+   S L DI R+D +N+   + +  + C  C+ + +F+C KCD+GLHP+CF  YH
Sbjct:  179 NFFTSVPLVRYLAKEKYCTTGTVRSDRTEQCPLKNPRDMKSEGRGSYDFRASEDVMLVRWVDNSVVTAVTNFENLSVGMASRWSREKRAKVQVPQPTVFSSYNKGMGGVDLMDQNVAVYRTRMRQRKWW---WPIFVYLFDVCVSNAWILNKKLLPKEDCIGQLLKFRRNLALTLLKKHGKQSSQGKIKPSPLQDI-RFDNQNHWPQENETQRRCAHCKKKTTFVCSKCDIGLHPKCFRGYH 416

HSP 2 Score: 106.301 bits (264), Expect = 4.136e-48
Identity = 58/121 (47.93%), Postives = 86/121 (71.07%), Query Frame = 3 
Query: 1260 QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTI-GTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDS 1619
            ++ YW+ +  V KLLS SM+ + F  IL  LH +DN I   +DR  K+KP++D L K FI++G ++E L +DESMIPY+ KHY K+++ GKPIRF +K  A+CS+  YL++F++Y GK+ S
Sbjct:   26 KRMYWSRQDDVPKLLSESMRCNRFEQILRFLHLNDNAILDPNDRLYKLKPILDALNKSFIQHGGIDEKLSVDESMIPYYGKHYAKQYIKGKPIRFGFKNWAICSSSGYLYAFEIYSGKDPS 146
[Close]
BLAST of SCAN box domain-containing protein vs. TrEMBL
Match: A0A1S3DGN1 (piggyBac transposable element-derived protein 3-like OS=Diaphorina citri OX=121845 GN=LOC103518107 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.087e-42
Identity = 73/242 (30.17%), Postives = 127/242 (52.48%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQK--PRGSADFRTSDGVLVMKWTDNKEVSLMSN-F*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPI--W-ISVTVNNSYQLMRKNGTKLSQ*DFIEHLVLFYCKSYGKSS-QQGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYHM 2437
            FF+S++++ +L   G+ A GT RENR  KCP+ +   +K+    RG+ D++T+ GV+++KW DN  V+L SN +    I+TA++ +R++KK +    P++            L      +I    +   G     PI  W + V +NN++ L R+ G  +    F   +V      YG +    GR+    + D +R D + ++I+     + C +C+ +    CR+CDV LH +CFEA+H+
Sbjct:  393 FFSSLAVIHKLKEDGFGATGTIRENRLQKCPLMDTKEMKKSKCDRGTFDYKTAKGVILVKWKDNAVVTLGSNQYGIHPIQTAKRFSREEKKQIDVPQPHIVSMYNKNMGGVDLMDN---NISNYRIGIRGKKWYTPILFWLLDVAMNNAWILSRQAGMTMDNLSFRREVVRALLMKYGSAPLAPGRRSIVSVPDPLRVDHRGHMIITGQARRRCVMCRNKTVKACRRCDVALHDKCFEAFHV 631

HSP 2 Score: 87.0409 bits (214), Expect = 1.087e-42
Identity = 68/214 (31.78%), Postives = 116/214 (54.21%), Query Frame = 3 
Query: 1002 RKVNRRWLKKSRE*PFHQEWNGGSMLS-KASSAENPQDYFELFYDETLFELMLRESNLCDVQKNE-LKVFIEGVH*WI-ISFVS--L*IT*QKTYWASKYHVSKLL-SNSMQRDCXXXXXXXXXXXXNT-IGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSV 1622
            R  N +W K+    P         ML  +  S  +P ++FE+F  E L E ++++S L  V KNE   + +  ++ +  I ++S  + +  ++ YW        +L SNSM+R+ F +I+ +LH  DN+ +  +D+ +K++P+++ +    +K    E  L IDESMIPYF +H  K+ +  KP+RF YK   + S   Y  SFD+Y G+ D +
Sbjct:  146 RLENMKWAKRDLVNPLKVYSEYPKMLPLRVCSESHPLEFFEMFITENLVENVVKQSVLYAVSKNEEFTLSVGDLYCYFGILYLSGYVQVPRRRMYWEEGTDSHNILVSNSMRRNRFDNIMKYLHVADNSRLNKNDKMAKLRPMMNEISNACLKNAFPETDLSIDESMIPYFGRHSTKQCIRNKPVRFGYKAWVLASKQGYCLSFDIYQGRRDKM 359
[Close]
BLAST of SCAN box domain-containing protein vs. TrEMBL
Match: A0A437AXL2 (DDE_Tnp_1_7 domain-containing protein OS=Chilo suppressalis OX=168631 GN=evm_012446 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.502e-42
Identity = 75/253 (29.64%), Postives = 124/253 (49.01%), Query Frame = 2 
Query: 1703 KNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRTGK-CPICEKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMS-NF*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIW---ISVTVNNSYQLMRKNGTKLSQ*DFIEHLVLFYCKSYGKSSQQ-GRKISSKLTDIVRYDGKNYLIVQ*DKGKSCR--LCQGRASFMCRKCDVGLHPRCFEAYHM 2437
            K   ++     FT I L+  L   GY   GT R+NR  K CPI +   +K+K RG  +F     V+V++W DN  V++ S +     +  A + ++  ++ +    PN+          + L      H+    +   G     PI+   I V +NNS+ LMR++G  +SQ  F   +V  Y ++YG + +  GR  +S++ + +RYDG N+     ++ + C    C+     +C KCDVGL  +CFE YH+
Sbjct:  329 KQKLQFYFDNLFTGIPLLIHLKSIGYGGTGTLRQNRLPKECPITKVESMKKKERGYYEFSCQGDVVVVRWMDNSVVTVASTDHKVNPLGFADRYSKASQQKIKVPRPNLIAIYNQYMGGTDLMD---AHVNNYRISIRGKKWWWPIFTWLIDVAINNSWILMRQSGKDISQLAFRREIVQTYLRNYGTAPKPGGRPSTSRVLEGIRYDGVNHFPKSIERKRRCAGVNCKTIGRVICTKCDVGLCLKCFEQYHV 578

HSP 2 Score: 99.3673 bits (246), Expect = 1.502e-42
Identity = 90/317 (28.39%), Postives = 160/317 (50.47%), Query Frame = 3 
Query:  714 LLTRKYIYLHALIYTIRMITADIAAMLEELEGND--DIYLGLPEVNELSDGDSDRSDEEVVGLSEK-ASHLL*TDAHVATM-----EPDDIYDDNQEALHSNAKRKVNRRWLKKSRE*PFHQEWNGGSMLSKASSAENPQDYFELFYDETLFELMLRES-------NLCDVQ--KNELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHV-SKLLSNSMQRD-CXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLG 1607
            +  RK++ LH           +IA +LE+++  D  DI++  PEV E +D DS  +DE+  GL E      L   A + +      EP +   D   +  ++ KRK+  +W K   + P H             +  +  D F+LF+D+ L E ++++S       N  D +    EL+ FI  +   I+S  +  +  +++YW S   + + L+ N+M+RD     +       +N +   D+ +K++P+++ L++KF+ +  +E++L  DESMI YF KH  K+ +  KPIRF YK   + ++  YL +F++Y G
Sbjct:    1 MTNRKHLKLH-----------EIADLLEQVDNGDLQDIFIEPPEVAEYTDEDS--ADEDSGGLIENLTGRQLLAGAEIVSQNINEEEPGECSSDLGPS--TSKKRKITYKWNKS--DLPDHPSPPFSPSSCHNYTDMSCTDMFQLFFDDKLCEFLIKQSTCYALFLNCPDPRFCTAELRCFIAIL---ILSGYNK-LPSKRSYWDSGDDMRNTLVHNAMRRDRFIQIMRFIHAADNNNLDKKDKMAKLRPMMNILKQKFLNHIPIEQNLNYDESMIEYFGKHGCKQCIRNKPIRFGYKCWCLNNSNGYLANFEVYQG 296
[Close]
BLAST of SCAN box domain-containing protein vs. TrEMBL
Match: A0A212FJ76 (PiggyBac transposable element-derived protein 3 OS=Danaus plexippus plexippus OX=278856 GN=KGM_204951 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.366e-39
Identity = 76/259 (29.34%), Postives = 125/259 (48.26%), Query Frame = 2 
Query: 1709 DTRYSLI--TFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS--DGVLVMKWTDNKEVSLMSNF*STAIK-TARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEK--ECVKRSGGGR*CPIW--------ISVTVNNSYQLMRKNGTKLSQ*DFIEHLVLFYCKSYGKSSQQG--RKISSKLTDIVRYDGKNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYH 2434
            D  Y ++   FFT   L+EE+T +G    GT RENRT  CP+    LLK+K RG+ D+RT+  +  ++ KW DN   S+ SN      K +A++ ++ +K+ +    P+          M +++ K    +++  E +     G     W        I +  +N++QL + N  KL    F   + +   +S  K+ ++G  R    +  D  R D  N+L++   K   CR C  +    C+KCDVG+  +CFE YH
Sbjct:  327 DLPYHVVFDIFFTGTPLLEEITKKGLRCTGTVRENRTSSCPLITSKLLKKKERGAVDYRTTHDNTFIIAKWHDNNIFSIASNAVGINPKQSAKRFSQSEKRNIVIEEPH----------MVSIYNKYMGGVDRSDENISHYRIGIRGKKWYMPLLTHMIDLAEHNAWQLYKINHGKLDHLGFRRRVAIALIESNSKNGKRGPSRPSHHEHAD-SRKDQMNHLVIPQSKETHCRQCHKKCLTRCKKCDVGVCVKCFETYH 574

HSP 2 Score: 92.0485 bits (227), Expect = 4.366e-39
Identity = 80/267 (29.96%), Postives = 136/267 (50.94%), Query Frame = 3 
Query:  834 PEVNELSDGDSDRSDEEVVGLSEKASHLL*TDAHVATMEPDDIYDDNQEALHSNAKRKVNRRWLKKSRE*PFHQEWNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN--------ELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHV-SKLLSNSMQRDCXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLG 1607
            P V+     D D  +E+ V L+    ++L   A V       + D  +E  +S  + K  R +  + R+    +       +  A   + P ++FE F DE +  L++ ESN   V+KN        ++K FI G+   ++S  S  +  ++ YW +     ++L+S++M RD F  I  HLH +DN +   D+ +K++PL+  L KKF+++  LEEH  +DE+MIPY+ KH  K+ + GKPIR+ +K     +   Y+   + Y G
Sbjct:   36 PPVDPDCLTDEDSGEEDNVTLNNLPRNILLQPAEVMIQGQIMVSDTEEEPSNSTGRTKRRRTYAWRKRD--LAKNPVNWPDVQGACQDKRPIEWFENFLDEDVISLLVSESNKYAVKKNLPGDITTEDMKCFI-GI--LLVSGYSW-LPRRRMYWENSPDTKNELISSAMTRDRFDFIFRHLHVNDN-LDLQDKYTKVRPLVTLLNKKFLEFSPLEEHYSVDEAMIPYYGKHGCKQHIKGKPIRYGFKAWVGATRLGYVLWIEPYQG 295
[Close]
BLAST of SCAN box domain-containing protein vs. TrEMBL
Match: A0A437B8H7 (DDE_Tnp_1_7 domain-containing protein OS=Chilo suppressalis OX=168631 GN=evm_008529 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.390e-38
Identity = 91/317 (28.71%), Postives = 162/317 (51.10%), Query Frame = 3 
Query:  714 LLTRKYIYLHALIYTIRMITADIAAMLEELEGND--DIYLGLPEVNELSDGDSDRSDEEVVGLSEK-ASHLL*TDAHVATM-----EPDDIYDDNQEALHSNAKRKVNRRWLKKSRE*PFHQEWNGGSMLSKASSAENPQDYFELFYDETLFELMLRES-------NLCDVQ--KNELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHV-SKLLSNSMQRD-CXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLG 1607
            +  RK++ LH           +IA +LE+++ +D  DI++  PEV E +D DS  +DE+  GL E      L   A + +      EP +   D   +  ++ KRK+  +W K   + P H      S      +  +  D F+LF+D+ L E ++++S       N  D +    EL+ FI  +   I+S  +  +  +++YW S   + + L+ N+M+RD     +       +N +   D+ +K++P+++ L++KF+ +  +E++L  DESMI YF KH  K+ +  KPIRF YK   + ++  YL +F++Y G
Sbjct:    1 MTNRKHLKLH-----------EIADLLEQVDNDDLQDIFIEPPEVAEYTDEDS--ADEDSGGLIENLTGRQLLAGAEIVSQNINEEEPGECSSDLGPS--TSKKRKITYKWNKS--DLPDHPSPPFSSSSCHNYTDMSCTDMFQLFFDDKLCEFLIKQSICYALFLNCPDPRFCTAELRCFIAIL---ILSGYNK-LPSKRSYWDSGNDMRNTLVHNAMRRDRFIQIMRFIHAADNNNLDKKDKMAKLRPMMNILKQKFLNHIPIEQNLNYDESMIEYFGKHGCKQCIRNKPIRFGYKCWCLNNSNGYLANFEVYQG 296

HSP 2 Score: 90.5077 bits (223), Expect = 3.390e-38
Identity = 68/242 (28.10%), Postives = 115/242 (47.52%), Query Frame = 2 
Query: 1703 KNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRTGK-CPICEKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMS-NF*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIW---ISVTVNNSYQLMRKNGTKLSQ*DFIEHLVLFYCKSYGKSSQQ-GRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRL--CQGRASFMCRKCDVG 2404
            K   ++     FT I L+  L   GY   GT R+NR  K CPI +   +K+K RG  +F     V+V++W DN  V++ S +     +  A + ++  ++ +    PN+          + L      H+    +   G     PI+   I V +NNS+ LMR++G  +SQ  F   +V  Y ++YG + +  GR  +S++ + +RYDG N+     ++ + C    C+     +C KCDV 
Sbjct:  329 KQKLQFYFDNLFTGIPLLIHLKSIGYGGTGTLRQNRLPKECPITKVESMKKKERGYYEFSCQGDVVVVRWMDNSVVTVASTDHKVNPLGFADRYSKASQQKIKVPRPNLIAIYNQYMGGTDLMD---AHVNNYRISIRGKKWWWPIFTWLIDVAINNSWILMRQSGKDISQLAFRREIVQTYLRNYGTAPKPGGRPSTSRVLEGIRYDGVNHFPKSIERKRRCAGVNCKTIGRVICTKCDVA 567
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000041934.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000117.1:399080:403449:1 gene:ENSAMXG00000029930.1 transcript:ENSAMXT00000041934.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 80.8777 bits (198), Expect = 3.612e-28
Identity = 66/247 (26.72%), Postives = 109/247 (44.13%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMSNF*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWI--------SVTVNNSYQLMRKNGTKLSQ*DFIEHLVLFYCKSYG-KSSQQGRK--ISSKLTDIVRYDG-KNYLIVQ*DKGKSCRLCQGRASFMCRKCDVGLHPRCFEAYHM 2437
             FTS+SL++E+T RGY + GT R+NR    P   KN   + PRG+    T    L+++W DN  V++ +N    A    R+      + +  +N ++                V +H +++  + S   R    W         S  VN+ Y      G  +    F   +     K +G K    GR+  ++  + D  RYD   ++ I   ++   CR+C  R ++ C KC+  LH  CF+AYH+
Sbjct:  270 LFTSLSLLDEMTKRGYGSCGTIRDNRLFDVPFTPKNEFNKLPRGTTQVLTEGEKLLVRWKDNNVVTMATNIKRHAYDQVRQ-----PQCIKQYNEHM--------------GGVDLH-DQQASRYSITIRSKKWWWPIFAWSLNSALVNSHYFYRDVMGGTIDLLTFTRVVAQSLIKRFGTKPLNHGRRSLLAITVQDQARYDQVSHWPINTGNRFFRCRVCDKRTTYACEKCNTSLHIECFKAYHI 496

HSP 2 Score: 65.4698 bits (158), Expect = 3.612e-28
Identity = 45/130 (34.62%), Postives = 75/130 (57.69%), Query Frame = 3 
Query: 1260 QKTYWASKYHV-SKLLSNSMQRDCXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNT 1646
            ++ +W+    V ++ +SN+M+R+ F +I+  LHF DNT  T D   K++P+   L   + K     E L +DESMI Y+  H  K+F+ GKP RF YK+ ++ S+  Y+H  + Y G+     + ++P T
Sbjct:  118 RRMHWSVDDDVHNECISNAMRRNRFDEIMASLHFVDNTKITEDPFFKVRPIFTELNASY-KVMPYSEWLAVDESMIRYYGHHGCKQFIRGKPFRFGYKIWSLASHKGYMHHMEPYGGR-----FTLLPQT 241
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000044689.1 (piggyBac transposable element-derived protein 3-like [Source:NCBI gene;Acc:111192949])

HSP 1 Score: 85.1149 bits (209), Expect = 4.410e-25
Identity = 83/264 (31.44%), Postives = 129/264 (48.86%), Query Frame = 3 
Query:  855 DGDSDRSDEEVVGLSEKASHLL*TDAHVATMEPDDIYDDNQEALHSNAKRKVNRRWLKKSRE*PFHQE-WNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKNE---LKV-----FIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTI-GTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKND 1616
            DGD   S+EE+V  S +A+                     Q+    N K KV  + +K+++    +   W G   L    S   P +YF  F+D  L  L++ +SNL   Q+N    LK+     FI  V    +S + L     + YW++   V ++ ++ M RD + +I H +HF DNT    SDR  KI+PLID L  KF      E+ + IDE M+P+  +   K+++  KP ++ YK+  +C     +HSFD+Y GK+D
Sbjct:   66 DGDGSSSEEEIVTTSGQAAR--------------------QKKKRPN-KEKVAWKTVKQTQNSAKNVPMWQGA--LPDNDSIRLPVEYFRQFFDTELLTLIVNQSNLYSTQENPNHALKLDQKEQFIGTV--LYMSVIRL--PRSRIYWSNACRVDQV-ADVMPRDRWEEIKHCIHFTDNTAPNNSDRLFKIRPLIDSLLPKFQALPQ-EQMMSIDEQMVPFKGRSVLKQYIPKKPYKWGYKIFVLCDTKGLVHSFDVYAGKSD 300

HSP 2 Score: 50.8322 bits (120), Expect = 4.410e-25
Identity = 34/103 (33.01%), Postives = 57/103 (55.34%), Query Frame = 2 
Query: 1733 FFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTS--DGVLV--MKWTDNKEVSLMSNF*ST-AIKTARK*NRQDKKLLSYHNPNVF 2026
            +F+S++L   L  RG  ALGT R+NR   C   + + LK+K RG+ + + +  D V V  +KW DN+ V + S F S   +    + +R+ K+ +S   P++ 
Sbjct:  335 WFSSLNLFVALAKRGIPALGTVRQNRLQDCSFSKDDTLKKKGRGTFEEQQAVIDSVEVRAVKWFDNRGVIVASTFASAQPVSFTERWDRKQKRKVSVQCPSII 437
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000049307.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000190.1:48620:52067:1 gene:ENSAMXG00000030374.1 transcript:ENSAMXT00000049307.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 51.2174 bits (121), Expect = 3.236e-15
Identity = 47/182 (25.82%), Postives = 86/182 (47.25%), Query Frame = 3 
Query: 1101 NPQDYFELFYDETLFELMLRESNLCDVQK----------NELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTIGTSDRAS---KIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLG 1607
             P +YF+ +  + +F LM   +N+  +Q            E+K  I G+H   ++   + +     YW +   +  +  N+M RD F  +  HLH  +N    ++      K++PL D ++ + ++   LEE+L +DE M+P+      K+F+ GKP  +  K+  MC      + F L+ G
Sbjct:   36 RPYEYFKRYIPDEIFSLMADNTNVYALQSATRCFKPTSSGEIKTLI-GLH---LAMGVMKMPRVSMYWEAGMDIG-IFQNTMPRDRFFQLRSHLHLVNNLEKPAENTDVFFKVRPLYDVIRSRCLEL-PLEENLCVDEQMVPFRGTLSVKQFIKGKPHPWGVKIYFMCGKSGMAYDFLLHQG 211

HSP 2 Score: 41.5874 bits (96), Expect = 3.236e-15
Identity = 26/75 (34.67%), Postives = 37/75 (49.33%), Query Frame = 2 
Query: 1676 YYRKQLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFRTSDGVLV 1900
            Y+  Q   + N   Y    +FTS +L+E L  R   A GT R +R  + P+     + +KPRGS D   S  VL+
Sbjct:  232 YHLSQRITEANHKLY-FDNYFTSYNLLELLAERKIHAAGTARVSRFARPPLQSDKEMAKKPRGSCDEVVSRDVLM 305

HSP 3 Score: 29.261 bits (64), Expect = 3.236e-15
Identity = 13/33 (39.39%), Postives = 21/33 (63.64%), Query Frame = 1 
Query: 1987 RQKIVELPQPECFQNYNARMGYVDVMDQGLSTY 2085
            + + V + +PE  + YN  MG VD++DQ +S Y
Sbjct:  325 KAQFVMVSRPEVVKLYNEAMGGVDLLDQLVSLY 357
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000029839.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000180.1:82354:86597:-1 gene:ENSAMXG00000035772.1 transcript:ENSAMXT00000029839.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 49.6766 bits (117), Expect = 5.799e-14
Identity = 50/184 (27.17%), Postives = 94/184 (51.09%), Query Frame = 3 
Query: 1095 AENPQDYFELFYDETLFELMLRESNLCDVQKN---------ELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVS-KLLSNSMQRDCXXXXXXXXXXXXN---TIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLG 1607
              +P D+F   + + +   ++  +NL  VQK          E K F+ G++  ++S+V       + YW+S+  +  +L++++M  + F  IL ++HF DN       +DR  KI+P++D L++ F      +E   +DE MIPY  +   K++V  KP  +  K+     +  Y+++F+ Y G
Sbjct:   93 GADPIDFFMHLFTQDMINDIVHNTNLYAVQKGKDKLALTSEEFKTFL-GIN-MVMSYVRY--PRSRMYWSSETGLRLELIADAMPVNRFEQILRYMHFVDNYSLDPKNADRFVKIRPVLDALKETFQSALDPDEFQSVDEMMIPYKGRLSIKQYVPKKPKPWGIKVWVRAGSSGYMYNFEPYQG 272

HSP 2 Score: 48.521 bits (114), Expect = 5.799e-14
Identity = 64/281 (22.78%), Postives = 113/281 (40.21%), Query Frame = 2 
Query: 1688 QLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRT--GKCPICEKNLLKQKPRGSADFRT-SDGVLVMKWTDNKEVSLMSNF*S-TAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIW--------ISVTVNNSYQLMRKNGTKLSQ*DFIEHLVLFYCKSY-----------GKSSQ----QGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRLCQG-----RASFMCRKCDVGLHPRCFEAYH 2434
            Q   DKN   +    FF +I L++ L  +G +  GTCR NR    +  + ++  +KQ+ RGS    T +  + + +W D+  + + S+    +    A++ ++++K++L+   P  F        M        V +  +CV           W        + VT  N++ L R +G +      + H      ++            G+ S       R+  SK    +RY   N+   Q  + K+   CQ      R  ++C +C V L P CF  YH
Sbjct:  295 QDIQDKNHKVF-FDNFFCTIPLLQALEHQGIYGTGTCRSNRLHGAQEKLKKEKQMKQEGRGSVSVVTNAQNITITRWLDSSVIHMASSCTGLSPTDVAQRWSKKEKRMLNIQRP--FSVKLYNQHMGG------VDLMDQCVAMYPHRHRNKRWYIRVFFHFLDVTTVNAWLLYRMSGNEAKD---LLHFKASIARALINAGSVKIHTRGRPSATPPPAKRRAVSKAPPEIRYAHGNHW-PQLKETKNASRCQDAACTRRTKYICMQCLVALCPGCFGNYH 562
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000030708.1 (pep primary_assembly:Astyanax_mexicanus-2.0:14:30675304:30677836:1 gene:ENSAMXG00000043231.1 transcript:ENSAMXT00000030708.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 51.6026 bits (122), Expect = 1.051e-10
Identity = 51/184 (27.72%), Postives = 94/184 (51.09%), Query Frame = 3 
Query: 1095 AENPQDYFELFYDETLFELMLRESNLCDVQKN---------ELKVFIEGVH*WIISFVSL*IT*QKTYWASKYHVS-KLLSNSMQRDCXXXXXXXXXXXXN---TIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLG 1607
              +P D+F   + + +   ++  +NL  VQK          E K F+ G++  ++S+V       + YW+S+  +  +L++++M  + F  IL ++HF DN       +DR  KI+P++D L++ F      EE   +DE MIPY  +   K++V  KP  +  K+     +  Y+++F+ Y G
Sbjct:   76 GADPIDFFMHLFTQDMINDIVHNTNLYAVQKGKDKLALTSEEFKTFL-GIN-MVMSYVRY--PRSRMYWSSETGLRLELIADAMPVNRFEQILRYMHFVDNYSLDPKNADRFVKIRPVLDALKETFQSALDPEEFQSVDEMMIPYKGRLSIKQYVPKKPKPWGIKVWVRAGSSGYMYNFEPYQG 255

HSP 2 Score: 35.4242 bits (80), Expect = 1.051e-10
Identity = 29/114 (25.44%), Postives = 59/114 (51.75%), Query Frame = 2 
Query: 1688 QLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENRT--GKCPICEKNLLKQKPRGSADFRT-SDGVLVMKWTDNKEVSLMSNF*S-TAIKTARK*NRQDKKLLSYHNP 2017
            Q   DKN   +    FF +I L++ L  +G +  GTCR NR    +  + ++  +KQ+ RGS    T +  + + +W D+  + + S+    +    A++ ++++K++L+   P
Sbjct:  278 QDIQDKNHKVF-FDNFFCTIPLLQALEHQGIYGTGTCRSNRLHGAQKKLKKEKQMKQEGRGSVSVVTNAQNITITRWLDSSVIHMASSCTGLSPTDVAQRWSKKEKRMLNIQRP 390
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000038522.1 (pep primary_assembly:ASM223467v1:10:9345195:9347118:-1 gene:ENSORLG00000027882.1 transcript:ENSORLT00000038522.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 74.7146 bits (182), Expect = 6.111e-22
Identity = 60/215 (27.91%), Postives = 114/215 (53.02%), Query Frame = 3 
Query: 1056 EWNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN----------ELKVFI-EGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTIGTS---DRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            EW  G  L K+   ++P +YF++F+ E + E+++ +SNL  +Q N          EL+ F+   V+   +S   L  T  + +W     VS++ +++M  + +  I   LHF++N +      D   KI+PL+ HL  K ++   + E L +DE M+P+  ++  K+++  KP ++ YK+  +  +    H+F++Y G+   VQ   +P+ G+ G
Sbjct:   88 EWQAG--LPKSDDIKSPYEYFKMFFSEDILEVVVEQSNLYAIQCNTNKPLNLTTKELEQFMGTAVY---MSLFGLPGT--RMFWNKATRVSQV-ADTMSLNRWEFIKKCLHFNNNEVRQGENVDHLHKIRPLVTHLTSK-LQTIPMGEKLAVDEQMVPFKGRNRLKQYLPAKPKKWGYKILVLAGSDGVPHNFEIYTGR--VVQPPELPDVGASG 291

HSP 2 Score: 50.8322 bits (120), Expect = 6.111e-22
Identity = 67/264 (25.38%), Postives = 117/264 (44.32%), Query Frame = 2 
Query: 1676 YYRKQLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENR-TGKCPICEKNLLKQKPRGSADFRTS----DGVLVMKWTDNKEVSLMSNF-*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWISVTVNNSYQLMRKN--GTKLSQ*DFIEHLVLFYCKSY-GKSSQQGRKISSKLTDI----VRYDGKNYLIVQ*DKGKSCRL--CQGRASFMCRKCDVGLHPRCF 2422
            + + +LF D          +FTS+ L+  L  +G    GT R NR  G   +C+  L K+  RGS D +T+      +  +KW DN+ VSL+S++  +  +    + + + KK++    P V +          L   +      +        R    +I +T   ++ L +++   T +S+    E + L+  KSY G+S  + ++     T I    VR D   + +V  +K   C++  C+G     C+KCDV L   CF
Sbjct:  304 HQKHKLFFD---------NWFTSVPLILTLAQQGIHCAGTVRSNRLPGVSMMCDAEL-KRTGRGSFDQKTAMVGETTLHAVKWYDNRPVSLLSDYIGAHPVTDVDRWDGKQKKVIRVPCPAVVREYNKNMGGVDLLDSLIALYRTKIRSNKWYHRLMFHFIDMTTVTAWLLYKRDCSSTGMSK---EEQIRLYTFKSYIGESLCKKKRRRGPATPIPVPEVRLDATAHWMVMDEKKGRCKVPGCKGTPKAKCQKCDVRL---CF 551
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000047092.1 (piggyBac transposable element-derived protein 2-like [Source:NCBI gene;Acc:111948922])

HSP 1 Score: 75.485 bits (184), Expect = 2.255e-21
Identity = 61/215 (28.37%), Postives = 114/215 (53.02%), Query Frame = 3 
Query: 1056 EWNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN----------ELKVFI-EGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTIGTS---DRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            EW  G  L K+   ++P +YF+LF+ E + E+++ +SNL  +Q N          EL+ F+   V+   +S   L  T  + +W     VS++ +++M  + +  I   LHF++N +      D   KI+PL+ HL  K ++   + E L +DE M+P+  ++  K+++  KP ++ YK+  +  +    H+F++Y G+   VQ   +P+ G+ G
Sbjct:   88 EWQAG--LPKSDDIKSPYEYFKLFFSEDILEVVVEQSNLYAIQCNTNKPLNLTTKELEQFMGTAVY---MSLFGLPGT--RMFWNKATRVSQV-ADTMSLNRWEFIKKCLHFNNNEVRQGENVDPLHKIRPLVTHLTSK-LQTIPMGEKLAVDEQMVPFKGRNRLKQYLPAKPKKWGYKILVLAGSDGVQHNFEIYTGR--VVQPPELPDVGASG 291

HSP 2 Score: 48.1358 bits (113), Expect = 2.255e-21
Identity = 65/275 (23.64%), Postives = 117/275 (42.55%), Query Frame = 2 
Query: 1676 YYRKQLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENR-TGKCPICEKNLLKQKPRGSADFRTS----DGVLVMKWTDNKEVSLMSNF-*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWISVTVNNSYQLMRKN--GTKLSQ*DFIEHLVLFYCKSY----------------GKSSQQGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRL--CQGRASFMCRKCDVGLHPRCF 2422
            + + +LF D          ++TS+ L+  L  +G    GT R NR  G   +C+  L K+  RGS D +T+      +  +KW DN+ VSL+S++  +  +    + + + KK++    P V +          L   +      +   +    R    +I +T   ++ L +++   T +S+    E + L+  KSY                G+  ++G      + D VR D   + +V  +K   C++  C+G     C+KCDV L   CF
Sbjct:  304 HQKHKLFFD---------NWYTSVPLILTLAQQGIHCAGTVRSNRLPGVSMMCDAEL-KRTGRGSFDQKTAMVGETTLHAVKWYDNRPVSLLSDYIGAHPVTDVDRWDGKQKKVIRVPCPAVVREYNKNMGGVDLLDSLIALYRTKIRSKKWYHRLMFHFIDMTTVTAWLLYKRDCSSTGMSK---EEQIRLYTFKSYIGESLCKSGKNLEHKRGQKRRRGPATPIPVPD-VRLDATAHWMVMDEKKGRCKVPGCKGTPKAKCQKCDVRL---CF 561
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000042135.1 (pep primary_assembly:ASM223467v1:1:6921929:6923917:1 gene:ENSORLG00000030303.1 transcript:ENSORLT00000042135.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 70.0922 bits (170), Expect = 4.700e-20
Identity = 59/215 (27.44%), Postives = 112/215 (52.09%), Query Frame = 3 
Query: 1056 EWNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN----------ELKVFI-EGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTIGTS---DRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            EW     L K+   ++P +YF++F+ E + E+++ +SNL  +Q N          EL+ F+   V+   +S   L  T  + +W     VS++ +++M  + +  I   LHF++N +      D   KI+PL+ HL  K ++   + E L +DE M+P+  ++  K+++  KP ++ YK+  +       H+F++Y G+   VQ   +P+ G+ G
Sbjct:   88 EWQAS--LPKSDDIKSPYEYFKMFFSEDILEVVVEQSNLYAIQCNTNKPLNLTTKELEQFMGTAVY---MSLFGLPGT--RMFWNKATRVSQV-ADTMALNRWEFIKKCLHFNNNEVRQGENVDPLHKIRPLVTHLTSK-LQTIPMGEKLAVDEQMVPFKGRNRLKQYLPAKPKKWVYKILVLAGCDGVPHNFEIYTGR--VVQPPELPDVGASG 291

HSP 2 Score: 48.521 bits (114), Expect = 4.700e-20
Identity = 66/275 (24.00%), Postives = 116/275 (42.18%), Query Frame = 2 
Query: 1676 YYRKQLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENR-TGKCPICEKNLLKQKPRGSADFRTS----DGVLVMKWTDNKEVSLMSNF-*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWISVTVNNSYQLMRKN--GTKLSQ*DFIEHLVLFYCKSY----------------GKSSQQGRKISSKLTDIVRYDGKNYLIVQ*DKGKSCRL--CQGRASFMCRKCDVGLHPRCF 2422
            + + +LF D          +FTS+ L+  L  +G    GT R NR  G   +C+  L K+  RGS D +T+      +  +KW DN+ VSL+S++  +  +    + + + KK++    P V +          L   +      +   +    R    +I +T   ++ L +++   T +S+    E + L+  KSY                G+  ++G      + D VR D   + +V   K   C++  C+G     C+KCDV L   CF
Sbjct:  304 HQKHKLFFD---------NWFTSVPLILTLAQQGIHCAGTVRSNRLPGVSLMCDAEL-KRTGRGSFDQKTAMVGETTLHAVKWYDNRSVSLLSDYIGAHPVTDVDRWDGKQKKVIRVPCPAVVREYNKNMGGVDLLDSLIALYRTKIRSKKWYHRLMFHFIDITTVTAWLLYKRDCSSTGMSK---EEQIRLYTFKSYIGESLCKSGKNLEHKRGQKRRRGPATPIPVPD-VRLDATAHWMVMDKKKGRCKVPGCKGTPKAKCQKCDVRL---CF 561
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000038512.1 (piggyBac transposable element-derived protein 2-like [Source:NCBI gene;Acc:111947160])

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-19
Identity = 58/215 (26.98%), Postives = 114/215 (53.02%), Query Frame = 3 
Query: 1056 EWNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN----------ELKVFI-EGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTIGTS---DRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            EW     L K+ + ++P +YF++F+ E + E+++ ++NL  +Q N          EL+ F+   V+   +S   L  T  + +W     VS++ +++M  + +  I   LHF++N +      D   KI+PL+ HL  K ++   + E L +DE M+P+  ++  K+++  KP ++ YK+  +  +    H+F++Y G+   VQ   +P+ G+ G
Sbjct:   73 EWQAS--LPKSDNIKSPYEYFKIFFSENILEVVVEQANLYAIQCNTNKPLNLTTKELEQFMGTAVY---MSLFGLPGT--RMFWNKATRVSQV-ADTMSLNRWEFIKKCLHFNNNEVRQGENVDSLHKIRPLVTHLTSK-LQTIPMGEKLAVDEQMVPFKGRNRLKQYLPAKPKKWGYKILVLAGSDGVPHNFEIYTGR--VVQPPELPDVGASG 276

HSP 2 Score: 43.8986 bits (102), Expect = 3.007e-19
Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 2 
Query: 1676 YYRKQLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENR-TGKCPICEKNLLKQKPRGSADFRTS----DGVLVMKWTDNKEVSLMSNF 1945
            + + +LF+D         ++FTS+ L+  L  +G    GT R NR  G   +C+  L K+  RGS D +T+      +  +KW DN+ VSL+S++
Sbjct:  289 HQKHKLFID---------SWFTSVPLILTLAQQGIDCAGTVRSNRLPGVSMMCDAEL-KRTGRGSFDQKTAMVGETTLHAVKWYDNRSVSLLSDY 373
[Close]
BLAST of SCAN box domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000036570.1 (pep primary_assembly:ASM223467v1:15:4424179:4426102:1 gene:ENSORLG00000027498.1 transcript:ENSORLT00000036570.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 67.3958 bits (163), Expect = 3.571e-19
Identity = 58/215 (26.98%), Postives = 112/215 (52.09%), Query Frame = 3 
Query: 1056 EWNGGSMLSKASSAENPQDYFELFYDETLFELMLRESNLCDVQKN----------ELKVFI-EGVH*WIISFVSL*IT*QKTYWASKYHVSKLLSNSMQRDCXXXXXXXXXXXXNTIGTS---DRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRG 1658
            EW     L K+   ++P +YF++F+ E + E+++ +SNL  +Q N          EL+ F+   V+   +S   L  T  + +W     VS++ +++M  + +  I   LHF++N +      D   KI+PL+ HL  K ++   + E L +DE M+ +  ++  K+++  KP ++ YK+  +  +    H+F++Y G+   VQ   +P+ G+ G
Sbjct:   88 EWQAS--LPKSDDIKSPYEYFKMFFSEDILEVVVEQSNLYAIQCNTNKPLNLTTKELEQFMGTAVY---MSLFGLPGT--RMFWNKATLVSQV-ADTMALNRWEFIKRCLHFNNNKVRQGENVDPLHKIRPLVTHLTSK-LQTIPMGEKLAVDEQMVTFKGRNRLKQYLPAKPKKWGYKILVLAGSDGVPHNFEIYTGR--VVQPPELPDVGASG 291

HSP 2 Score: 48.521 bits (114), Expect = 3.571e-19
Identity = 67/264 (25.38%), Postives = 116/264 (43.94%), Query Frame = 2 
Query: 1676 YYRKQLFLDKNDTRYSLITFFTSISLMEELTLRGYFALGTCRENR-TGKCPICEKNLLKQKPRGSADFRTS----DGVLVMKWTDNKEVSLMSNF-*STAIKTARK*NRQDKKLLSYHNPNVFKTTTLAWDMSTLWTKV*VHIEKECVKRSGGGR*CPIWISVTVNNSYQLMRKN--GTKLSQ*DFIEHLVLFYCKSY-GKSSQQGRKISSKLTDI----VRYDGKNYLIVQ*DKGKSCRL--CQGRASFMCRKCDVGLHPRCF 2422
            + + +LF D          +FTS+ L+  L  +G    GT R NR  G   +C+  L K+  RGS D +T+      +  +KW DN+ VSL+S++  +  +    + + + KK++    P V +          L   +      +   +    R    +I +T   ++ L +++   T +S+    E + L   KSY G+S  + ++     T I    VR D   + +V   K   C++  C+G     C+KCDV L   CF
Sbjct:  304 HQKHKLFFD---------NWFTSVPLILTLAQQGIHCAGTVRSNRLPGVSMMCDAEL-KRTGRGSFDQKTAMVGETTLHAVKWYDNRSVSLLSDYIGAHPVTDVDRWDGKQKKVIRVPCPAVVREYNKNMGGVDLLDSLIAPYRTKIRSKKWYHRLMFHFIDMTTVTAWLLYKRDCSSTGMSK---EEQIRLCTFKSYIGESLCKKKRRRGPATPIPVPDVRLDATAHWMVMDKKKGRCKVPGCKGTPKAKCQKCDVRL---CF 551
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BLAST of SCAN box domain-containing protein vs. Planmine SMEST
Match: SMESG000025761.1 (SMESG000025761.1)

HSP 1 Score: 168.318 bits (425), Expect = 1.090e-47
Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 3 
Query: 1314 MQRDCXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNIIPNTGSRGKCCNE 1673
            M+RDCFLDIL HLHFH+NTI TSDR +KI+ LIDHLQKKFI++ SL+E L IDESMIPYF KHYGK F+ GKPIRF YKM  +CS   YLHSFDLYLGKNDS QYNIIPN G  GKCCNE
Sbjct:    1 MRRDCFLDILQHLHFHNNTIETSDRVAKIRTLIDHLQKKFIEHRSLQERLAIDESMIPYFGKHYGKSFIRGKPIRFGYKMWEICSKVGYLHSFDLYLGKNDSEQYNIIPNIGQEGKCCNE 120

HSP 2 Score: 89.3521 bits (220), Expect = 3.361e-20
Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 2 
Query: 1808 RTGKCPIC-EKNLLKQKPRGSADFRTSDGVLVMKWTDNKEVSLMSNF*STAIKTARK*NRQDKK 1996
            + GKC  C EKNLLKQKPRG+ DFR SD VLVMK  DN+EVSLMSNF STAIKTAR+ NRQDKK
Sbjct:  113 QEGKC--CNEKNLLKQKPRGNVDFRMSDDVLVMKLKDNEEVSLMSNFESTAIKTARRWNRQDKK 174
[Close]
BLAST of SCAN box domain-containing protein vs. Planmine SMEST
Match: SMESG000065350.1 (SMESG000065350.1)

HSP 1 Score: 132.109 bits (331), Expect = 4.771e-33
Identity = 71/89 (79.78%), Postives = 76/89 (85.39%), Query Frame = 3 
Query:  765 MITADIAAMLEELEGNDDIYLGLPEVNELSDGDSDRSDEEVVGLSEKASH-LL*TDAHVATMEPDDIYDDNQEALHSNAKRKVNRRWLK 1028
            MITA IAA+LEE   N+DIYL LPEVN+L DGDSD+SDEEVVGLSEK SH LL TDAHVA M+PDDI DDNQEAL S AKRKVNRRWLK
Sbjct:    1 MITAVIAALLEE---NEDIYLRLPEVNKLYDGDSDKSDEEVVGLSEKLSHLLLRTDAHVANMKPDDIDDDNQEALQSKAKRKVNRRWLK 86
[Close]
BLAST of SCAN box domain-containing protein vs. Planmine SMEST
Match: SMESG000065350.1 (SMESG000065350.1)

HSP 1 Score: 132.494 bits (332), Expect = 4.909e-33
Identity = 71/89 (79.78%), Postives = 76/89 (85.39%), Query Frame = 3 
Query:  765 MITADIAAMLEELEGNDDIYLGLPEVNELSDGDSDRSDEEVVGLSEKASH-LL*TDAHVATMEPDDIYDDNQEALHSNAKRKVNRRWLK 1028
            MITA IAA+LEE   N+DIYL LPEVN+L DGDSD+SDEEVVGLSEK SH LL TDAHVA M+PDDI DDNQEAL S AKRKVNRRWLK
Sbjct:    1 MITAVIAALLEE---NEDIYLRLPEVNKLYDGDSDKSDEEVVGLSEKLSHLLLRTDAHVANMKPDDIDDDNQEALQSKAKRKVNRRWLK 86

HSP 2 Score: 29.6462 bits (65), Expect = 4.909e-33
Identity = 14/19 (73.68%), Postives = 14/19 (73.68%), Query Frame = 1 
Query: 1027 KNLESNLFIKNGMVAVC*A 1083
            KNL  NLFIKNGM  VC A
Sbjct:   86 KNLGRNLFIKNGMATVCQA 104
[Close]
BLAST of SCAN box domain-containing protein vs. Planmine SMEST
Match: SMESG000039958.1 (SMESG000039958.1)

HSP 1 Score: 51.2174 bits (121), Expect = 1.190e-13
Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 2 
Query: 1730 TFFTSISLMEELTLRGYFALGTCRENRTGKCPICEKNLLKQKPRGSADFR--TSDGVLVMKWTDNKEVSLMSNF*STAI 1960
             FF+S  L  +L      A+GT REN+  KCP+  +N L +  RGS DF+    + + V+KW DNK V++ SN  S  I
Sbjct:   85 NFFSSHRLFVDLKEMNTPAIGTFRENQLMKCPLKTENELNR--RGSVDFQFYERNQIQVVKWIDNKAVAISSNIYSANI 161

HSP 2 Score: 45.4394 bits (106), Expect = 1.190e-13
Identity = 20/58 (34.48%), Postives = 35/58 (60.34%), Query Frame = 3 
Query: 1461 LVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKNDSVQYNI 1634
            L +DE ++ ++++H   +F+  KPIRF  K   +CS+  Y + F+L   KND  + N+
Sbjct:    2 LSVDEQIVKFYARHPLNQFISNKPIRFGLKSWLLCSSFGYCNLFNLCCWKNDGEKTNV 59
[Close]
BLAST of SCAN box domain-containing protein vs. Planmine SMEST
Match: SMESG000071608.1 (SMESG000071608.1)

HSP 1 Score: 52.373 bits (124), Expect = 1.548e-6
Identity = 54/192 (28.12%), Postives = 93/192 (48.44%), Query Frame = 3 
Query: 1110 DYFELFYDETLFELMLRESNLCDVQ--------------------KNELKVFIEGVH*WIISFVSL*IT*QKTYWASK--YHVSKLLS-NSMQRDCXXXXXXXXXXXXNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHLVIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKND 1616
            D F LF+DE +  L++ E+N+   Q                      E++ F  G+  W+       IT   +YW++K  Y  S  LS  S  R   L  L H   ++N I   DR +KIKPL+D L+ K+ K     E+ VIDE+++P+  +   ++++  K  ++  K+  +C++  Y  +  +Y GK++
Sbjct:  115 DTFMLFFDEEVINLIVIETNIYAEQTIERTRTSRHNRLNKWHPANSEEIRKFF-GLFMWMGLVRMGKIT---SYWSNKDIYKNSTALSIMSRSRFEILLRLLHFSNNENAI-PGDRLAKIKPLLDLLEAKYKKVFVPGENHVIDETLVPWRGRLVFRQYIPNKAHKYGIKLFKLCTSEGYTWASKMYSGKSE 301
The following BLAST results are available for this feature:
BLAST of SCAN box domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ERCC69.006e-3429.03ERCC excision repair 6, chromatin remodeling facto... [more]
ERCC66.587e-3329.39ERCC excision repair 6, chromatin remodeling facto... [more]
ERCC66.587e-3329.39ERCC excision repair 6, chromatin remodeling facto... [more]
PGBD21.371e-3129.06piggyBac transposable element derived 2 [Source:HG... [more]
PGBD17.134e-2228.92piggyBac transposable element derived 1 [Source:HG... [more]
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BLAST of SCAN box domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
CABZ01069162.11.793e-1035.21pep scaffold:GRCz11:KN149950.1:74:5493:1 gene:ENSD... [more]
si:dkey-19f4.23.997e-828.87si:dkey-19f4.2 [Source:ZFIN;Acc:ZDB-GENE-121214-26... [more]
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BLAST of SCAN box domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q8N328|PGBD3_HUMAN4.003e-3329.03PiggyBac transposable element-derived protein 3 OS... [more]
sp|P0DP91|ERPG3_HUMAN2.928e-3229.39Chimeric ERCC6-PGBD3 protein OS=Homo sapiens OX=96... [more]
sp|Q6P3X8|PGBD2_HUMAN6.094e-3129.06PiggyBac transposable element-derived protein 2 OS... [more]
sp|Q96JS3|PGBD1_HUMAN3.173e-2128.92PiggyBac transposable element-derived protein 1 OS... [more]
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BLAST of SCAN box domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1B6IFK54.136e-4831.40DDE_Tnp_1_7 domain-containing protein (Fragment) O... [more]
A0A1S3DGN11.087e-4230.17piggyBac transposable element-derived protein 3-li... [more]
A0A437AXL21.502e-4229.64DDE_Tnp_1_7 domain-containing protein OS=Chilo sup... [more]
A0A212FJ764.366e-3929.34PiggyBac transposable element-derived protein 3 OS... [more]
A0A437B8H73.390e-3828.71DDE_Tnp_1_7 domain-containing protein OS=Chilo sup... [more]
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BLAST of SCAN box domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000041934.13.612e-2826.72pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000044689.14.410e-2531.44piggyBac transposable element-derived protein 3-li... [more]
ENSAMXT00000049307.13.236e-1525.82pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000029839.15.799e-1427.17pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000030708.11.051e-1027.72pep primary_assembly:Astyanax_mexicanus-2.0:14:306... [more]
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BLAST of SCAN box domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SCAN box domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000038522.16.111e-2227.91pep primary_assembly:ASM223467v1:10:9345195:934711... [more]
ENSORLT00000047092.12.255e-2128.37piggyBac transposable element-derived protein 2-li... [more]
ENSORLT00000042135.14.700e-2027.44pep primary_assembly:ASM223467v1:1:6921929:6923917... [more]
ENSORLT00000038512.13.007e-1926.98piggyBac transposable element-derived protein 2-li... [more]
ENSORLT00000036570.13.571e-1926.98pep primary_assembly:ASM223467v1:15:4424179:442610... [more]
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BLAST of SCAN box domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000025761.11.090e-4775.83SMESG000025761.1[more]
SMESG000065350.14.771e-3379.78SMESG000065350.1[more]
SMESG000065350.14.909e-3379.78SMESG000065350.1[more]
SMESG000039958.11.190e-1340.51SMESG000039958.1[more]
SMESG000071608.11.548e-628.13SMESG000071608.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30009806 ID=SMED30009806|Name=SCAN box domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3206bp
CAGAACCAAAATATGTTATTATACCTATCAAATTTTTTTTATTTTATAAA
ATTTATTACATAATATCTACTGATACTTCCACCACATTAACTATCTAGCA
CATAGAAATTCATCGAAATATATAAGTTTATATTTAAAATTTAATTAAAT
TATAAAAATCATCACAGAATATCAAATACCAATAAAAAGAATTATAGAAG
TTATGAAAGATGGACTGATTTTTTATGAATAAAATCTAAATTATTATTTC
CCAAAATATACACGCATAATTCTTAGTGAAATGCATTCAAAAGCACTCTG
CAATTAACCCATTATGGTCTAGATTTTTTGCATGTGAATAAAACACAATA
TTTAATTACATTTACCATAGTTATTTGATGTTTTATGCATCGCAACAGTT
TCTGACATTTTCATACTCATAATAAACGTGTTCAGTAGCAGTTTACTCCC
GTCGTGTTTATGGTAGAGCTCATTGTATCAAAGATGGTGACAGCGCGTGC
ACGCGTCTCTAAATCGTGAGTACTTTATATCTTATTATAAGTTACTTTAC
AATATGTTTTATTATCTGATATGAAAAACTTGTAGATAAAGGTATATTGT
ATTATGTAGAATGACATTTTGTGGCAATTTGATGACAATATCAGTTAGAA
CACTTTGTAAATTCTTTCTGTCAATTTTTCTACACTCAGGCACTAGAGGC
ATAGAAAGTCGCGCTACTGACGCGTAAGTATATATACTTACATGCTCTTA
TTTATACCATCAGAATGATCACTGCTGATATTGCAGCCATGCTAGAGGAA
TTAGAGGGAAATGACGATATATATTTGGGGCTTCCTGAAGTAAATGAATT
GTCTGATGGCGATTCAGACAGGTCGGACGAAGAGGTAGTAGGCTTATCAG
AAAAAGCGAGTCATCTACTTTGAACTGATGCACATGTTGCAACTATGGAG
CCCGATGACATCTATGATGATAATCAAGAAGCTCTCCATTCAAACGCCAA
AAGGAAAGTCAATAGGAGATGGCTAAAAAAATCTAGAGAGTAACCTTTTC
ATCAAGAATGGAATGGTGGCAGTATGTTAAGCAAAGCTTCATCTGCAGAA
AATCCTCAAGATTATTTTGAACTCTTTTATGATGAAACACTATTTGAATT
GATGCTGAGAGAAAGTAACTTATGTGACGTTCAAAAGAACGAATTGAAGG
TGTTCATTGAAGGTGTTCATTGATGGATTATTTCTTTCGTCAGTTTGTAA
ATTACCTGACAAAAAACATACTGGGCTTCTAAATATCACGTTTCTAAGCT
TCTGTCAAACAGTATGCAGAGAGATTGTTTTCTTGATATTTTGCACCATC
TACACTTTCACGATAATACCATTGGAACTAGTGATCGTGCTTCAAAAATT
AAGCCTCTCATTGACCACCTGCAGAAGAAGTTTATTAAATATGGATCCCT
TGAAGAGCACTTAGTCATTGATGAAAGTATGATCCCTTATTTCAGTAAAC
ATTATGGTAAAAAGTTCGTTTGTGGTAAGCCCATACGTTTTGAATATAAA
ATGTGTGCAATGTGTTCAAATGGAAATTATCTTCATAGTTTTGATCTGTA
CCTTGGAAAAAATGACAGTGTACAGTACAATATCATCCCGAACACAGGGT
CAAGAGGGAAATGTTGTAATGAAATTACTACAGAAAGCAGCTGTTCTTAG
ACAAAAACGATACAAGATATTCTTTGATAACTTTTTTTACCAGTATATCG
CTTATGGAAGAATTGACATTGCGCGGGTATTTTGCATTAGGAACTTGTAG
AGAAAACAGAACAGGTAAATGCCCCATATGCGAGAAAAATTTATTGAAGC
AGAAGCCAAGAGGAAGCGCTGACTTTAGAACGTCAGACGGTGTGTTAGTT
ATGAAATGGACAGACAATAAAGAAGTTAGTTTGATGTCAAACTTTTAATC
AACAGCGATAAAAACTGCAAGAAAATGAAATCGACAAGACAAAAAATTGT
TGAGCTACCACAACCCGAATGTTTTCAAAACTACAACGCTCGCATGGGAT
ATGTCGACGTTATGGACCAAGGTTTGAGTACATATAGAAAAAGAATGCGT
TAAAAGAAGTGGTGGTGGCCGATAGTGTCCTATTTGGATATCCGTAACTG
TAAATAACTCCTATCAGTTGATGAGGAAGAACGGAACAAAACTGTCTCAA
TAAGACTTCATTGAGCACTTAGTATTGTTTTACTGCAAGTCGTATGGTAA
ATCATCTCAACAAGGACGTAAGATCTCCTCAAAGCTGACAGATATTGTCA
GGTATGATGGAAAGAACTATTTAATTGTTCAATGAGATAAAGGAAAGTCT
TGCAGACTGTGTCAAGGCAGAGCTTCGTTTATGTGTAGGAAATGTGACGT
GGGTCTTCATCCACGATGTTTTGAAGCCTACCATATGCCATAAATGTTTT
TTTGAAGAAAAGTTTTCATGAAAGGAGTTTAATTGAATATAAATAAATAT
GAAAAGGGTCTTATTTTACTGTATCTTGTTGTTACTATTAACATATATTA
TTACGAACTAAGAATCAATATAAAATTTCACTTTAATATAACATAATTAG
ATTATACGTTTTTAAAATAGTTATATCAAATTCCGTACAGTTTATAAATT
ATTTTTGTCCCAATTGCTTGAGTGTAGGAAAATCATCTTTGTATTATTTC
ATAAATTATTATTTCAAACACAACAAAAATTTTGCATAGTTGATTAGAAT
CACATAATTAGTATATCTACAAATTTTCACGTTCCTACAACAATTATTAA
ACTTTTGGCCATAATGGGTTAAATAAAAGCGGATTTTAAACACGTTTGGA
TACATCTAATTTGTATACAAGTAAGCAAGCACACATTTTGTGTTTTTGGC
TATTTCTAAAATAGCCAATCAAAATCCTTCAAACGTGAATACGACACACA
GATTGTCTGCTTATATGAAATTTAATTATGATGATTTGCGAATAATAAAT
GTGATTTATTCGCACAAATTGAAGGTATATCTATTTTTGGAATTCATCCG
TTTTCGATTCCCTTTAACGGAGCAATTAATTTATCCTGATATCTGCAAAA
AGAAATCCTTTCACAAAATCCCAGAATGTGTTCCGACAGAGTTTTGATAG
TATAAAAACATCATAGAAAAAATAATTAAATATAAAAAATGCAAAATTAG
TTGAAT
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protein sequence of SMED30009806-orf-1

>SMED30009806-orf-1 ID=SMED30009806-orf-1|Name=SMED30009806-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=129bp
MQRDCFLDILHHLHFHDNTIGTSDRASKIKPLIDHLQKKFIKYGSLEEHL
VIDESMIPYFSKHYGKKFVCGKPIRFEYKMCAMCSNGNYLHSFDLYLGKN
DSVQYNIIPNTGSRGKCCNEITTESSCS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000418head
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR029526PGBD
Vocabulary: molecular function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0005044scavenger receptor activity
GO:0005515protein binding
GO:0042802identical protein binding
Vocabulary: biological process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006898receptor-mediated endocytosis
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 1..124
e-value: 2.8E-16
score: 59.8
NoneNo IPR availablePANTHERPTHR47055FAMILY NOT NAMEDcoord: 1..104