Clathrin light chain

Overview
NameClathrin light chain
Smed IDSMED30009797
Length (bp)879
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Clathrin light chain (SMED30009797) t-SNE clustered cells

Violin plots show distribution of expression levels for Clathrin light chain (SMED30009797) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Clathrin light chain (SMED30009797) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Clathrin light chain (SMED30009797) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30009797

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 9

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
intestinal phagocyteSMED30009797SMESG000020814.1 Contig2669GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30009797SMESG000012224.1 Contig5650GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30009797SMESG000012224.1 Contig2669GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
protonephridiaSMED30009797SMESG000012224.1 dd_Smed_v4_1361_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30009797SMESG000012224.1 dd_Smed_v4_1361_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30009797SMESG000012224.1 dd_Smed_v4_1361_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30009797SMESG000012224.1 Contig38890newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30009797SMESG000012224.1 Contig38890uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
epidermisSMED30009797SMESG000012224.1 dd_Smed_v4_1361_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Clathrin light chain vs. Ensembl Human
Match: CLTA (clathrin light chain A [Source:HGNC Symbol;Acc:HGNC:2090])

HSP 1 Score: 77.411 bits (189), Expect = 2.861e-16
Identity = 60/203 (29.56%), Postives = 100/203 (49.26%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETF--DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            D  A FLA+++ ++  I+ D  F  ++  +   Q         D  D + N     +S G + +Y +  ++   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +  NR ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   30 DPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLV 217
[Close]
BLAST of Clathrin light chain vs. Ensembl Human
Match: CLTB (clathrin light chain B [Source:HGNC Symbol;Acc:HGNC:2091])

HSP 1 Score: 73.559 bits (179), Expect = 6.634e-15
Identity = 46/128 (35.94%), Postives = 69/128 (53.91%), Query Frame = 3 
Query:  273 EPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            EPE I  WR E  +R+ + D   K   +     AKK+LE+WN   +EQ+   +  NR S+  FVKE  +  PG+EW++V ++C+FN + +                  KD SR++S+L+SLK  PL R
Sbjct:   99 EPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQC---------------KDVSRLRSVLMSLKQTPLSR 211
[Close]
BLAST of Clathrin light chain vs. Ensembl Human
Match: CLTA (clathrin light chain A [Source:HGNC Symbol;Acc:HGNC:2090])

HSP 1 Score: 70.0922 bits (170), Expect = 4.205e-14
Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:  372 AKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            A KELE+W    +EQL   +  NR ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   87 AIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLV 165
[Close]
BLAST of Clathrin light chain vs. Ensembl Human
Match: CLTA (clathrin light chain A [Source:HGNC Symbol;Acc:HGNC:2090])

HSP 1 Score: 67.781 bits (164), Expect = 1.029e-12
Identity = 59/216 (27.31%), Postives = 100/216 (46.30%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETF--DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRK------------LNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+ D  F  ++  +   Q         D  D + N     +S G + +Y +  ++   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +             L + ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   30 DPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNSTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLVH 230
[Close]
BLAST of Clathrin light chain vs. Ensembl Human
Match: CLTA (clathrin light chain A [Source:HGNC Symbol;Acc:HGNC:2090])

HSP 1 Score: 67.781 bits (164), Expect = 1.029e-12
Identity = 59/216 (27.31%), Postives = 100/216 (46.30%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETF--DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRK------------LNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+ D  F  ++  +   Q         D  D + N     +S G + +Y +  ++   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +             L + ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   30 DPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNSTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLVH 230
[Close]
BLAST of Clathrin light chain vs. Ensembl Fly
Match: Clc (gene:FBgn0024814 transcript:FBtr0332771)

HSP 1 Score: 63.5438 bits (153), Expect = 1.377e-11
Identity = 72/221 (32.58%), Postives = 101/221 (45.70%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETREND--SYGQSMNYNSKPE--------------ISMP---RIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKL---NRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPL 650
            D  A+FLAREQ  LGD++     E+   S +            + +     E D  S G +    S                 IS P   R EPEKI  WR E ++R+ +KD EE+ +   L + +KKEL+DW     E + +K KL   N E Q   + E     PG+EW+R+ K+C+FN  P V+                KD SRM+SI L LK +P+
Sbjct:   14 DPAAEFLAREQSALGDLEA----EITGGSASAPPAASTDEGLGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI-SKTKLASRNAEKQAATL-ENGTIEPGTEWERIAKLCDFN--PKVN-------------KAGKDVSRMRSIYLHLKQNPI 213
[Close]
BLAST of Clathrin light chain vs. Ensembl Fly
Match: Clc (gene:FBgn0024814 transcript:FBtr0300813)

HSP 1 Score: 63.5438 bits (153), Expect = 1.377e-11
Identity = 72/221 (32.58%), Postives = 101/221 (45.70%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETREND--SYGQSMNYNSKPE--------------ISMP---RIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKL---NRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPL 650
            D  A+FLAREQ  LGD++     E+   S +            + +     E D  S G +    S                 IS P   R EPEKI  WR E ++R+ +KD EE+ +   L + +KKEL+DW     E + +K KL   N E Q   + E     PG+EW+R+ K+C+FN  P V+                KD SRM+SI L LK +P+
Sbjct:   14 DPAAEFLAREQSALGDLEA----EITGGSASAPPAASTDEGLGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI-SKTKLASRNAEKQAATL-ENGTIEPGTEWERIAKLCDFN--PKVN-------------KAGKDVSRMRSIYLHLKQNPI 213
[Close]
BLAST of Clathrin light chain vs. Ensembl Fly
Match: Clc (gene:FBgn0024814 transcript:FBtr0301126)

HSP 1 Score: 63.5438 bits (153), Expect = 1.377e-11
Identity = 72/221 (32.58%), Postives = 101/221 (45.70%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETREND--SYGQSMNYNSKPE--------------ISMP---RIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKL---NRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPL 650
            D  A+FLAREQ  LGD++     E+   S +            + +     E D  S G +    S                 IS P   R EPEKI  WR E ++R+ +KD EE+ +   L + +KKEL+DW     E + +K KL   N E Q   + E     PG+EW+R+ K+C+FN  P V+                KD SRM+SI L LK +P+
Sbjct:   14 DPAAEFLAREQSALGDLEA----EITGGSASAPPAASTDEGLGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI-SKTKLASRNAEKQAATL-ENGTIEPGTEWERIAKLCDFN--PKVN-------------KAGKDVSRMRSIYLHLKQNPI 213
[Close]
BLAST of Clathrin light chain vs. Ensembl Fly
Match: Clc (gene:FBgn0024814 transcript:FBtr0074830)

HSP 1 Score: 63.5438 bits (153), Expect = 1.377e-11
Identity = 72/221 (32.58%), Postives = 101/221 (45.70%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETREND--SYGQSMNYNSKPE--------------ISMP---RIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKL---NRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPL 650
            D  A+FLAREQ  LGD++     E+   S +            + +     E D  S G +    S                 IS P   R EPEKI  WR E ++R+ +KD EE+ +   L + +KKEL+DW     E + +K KL   N E Q   + E     PG+EW+R+ K+C+FN  P V+                KD SRM+SI L LK +P+
Sbjct:   14 DPAAEFLAREQSALGDLEA----EITGGSASAPPAASTDEGLGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI-SKTKLASRNAEKQAATL-ENGTIEPGTEWERIAKLCDFN--PKVN-------------KAGKDVSRMRSIYLHLKQNPI 213
[Close]
BLAST of Clathrin light chain vs. Ensembl Zebrafish
Match: clta (clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986])

HSP 1 Score: 79.337 bits (194), Expect = 3.242e-17
Identity = 60/205 (29.27%), Postives = 100/205 (48.78%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYN----NQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+       N+E ++      V    + D +    N     +S G S  Y +   +   + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   NEQL   +  NR ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   23 DPAAAFLAQQESEIAGIE-------NDEGFSILDSGDVPSSLSQDQDGGAMNGDLHGESNGPSDVYAAISSVDRLQAEPESLRKWREEQRDRLEELDANSRKQEAEWKEKAKLELEEWHTRQNEQLEKTKVNNRAAEEAMVSELDENSPGTEWERVARLCDFNPKSSK---------------QAKDVSRMRSVLISLKQAPLVR 205
[Close]
BLAST of Clathrin light chain vs. Ensembl Zebrafish
Match: clta (clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986])

HSP 1 Score: 79.337 bits (194), Expect = 3.242e-17
Identity = 60/205 (29.27%), Postives = 100/205 (48.78%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYN----NQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+       N+E ++      V    + D +    N     +S G S  Y +   +   + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   NEQL   +  NR ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   23 DPAAAFLAQQESEIAGIE-------NDEGFSILDSGDVPSSLSQDQDGGAMNGDLHGESNGPSDVYAAISSVDRLQAEPESLRKWREEQRDRLEELDANSRKQEAEWKEKAKLELEEWHTRQNEQLEKTKVNNRAAEEAMVSELDENSPGTEWERVARLCDFNPKSSK---------------QAKDVSRMRSVLISLKQAPLVR 205
[Close]
BLAST of Clathrin light chain vs. Ensembl Zebrafish
Match: cltb (clathrin, light chain B [Source:ZFIN;Acc:ZDB-GENE-101005-2])

HSP 1 Score: 78.5666 bits (192), Expect = 7.669e-17
Identity = 64/223 (28.70%), Postives = 102/223 (45.74%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSY----GQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I++        E       D  T    DF  +     D +    G + +Y++  ++ + R EPE +  WR E + R+ + D   K         AKKELEDW++H  EQ+   +  NR                   S+  F+KE +   PG+EW++V ++C+FN  P  S +              KD SRM+S+L+SLK  PL+R
Sbjct:   19 DPAAAFLAQQENEIAVIENDSTGFSLPEDGGAAPADTYTMSGGDFGGSSAVNGDMFQDTNGMTDSYSAIAQVDIQRQEPESLRKWREEQKTRLEELDSASKAAEAVWREKAKKELEDWHIHQTEQMEKNKVNNRIADKAFYKQPNSDVIGFVASEEAFLKECEDDSPGTEWEKVARLCDFN--PKTSRQ-------------TKDVSRMRSVLISLKQTPLLR 226
[Close]
BLAST of Clathrin light chain vs. Ensembl Zebrafish
Match: clta (clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986])

HSP 1 Score: 68.9366 bits (167), Expect = 2.072e-13
Identity = 61/223 (27.35%), Postives = 103/223 (46.19%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYN----NQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQL----LNKRKLNRE--------------SQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+       N+E ++      V    + D +    N     +S G S  Y +   +   + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   NEQL    +N R L+ +              ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   23 DPAAAFLAQQESEIAGIE-------NDEGFSILDSGDVPSSLSQDQDGGAMNGDLHGESNGPSDVYAAISSVDRLQAEPESLRKWREEQRDRLEELDANSRKQEAEWKEKAKLELEEWHTRQNEQLEKTKVNNRVLDEDFYKQPFADLIGYVAAEEAMVSELDENSPGTEWERVARLCDFNPKSSK---------------QAKDVSRMRSVLISLKQAPLVR 223
[Close]
BLAST of Clathrin light chain vs. Ensembl Zebrafish
Match: clta (clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986])

HSP 1 Score: 68.9366 bits (167), Expect = 2.072e-13
Identity = 61/223 (27.35%), Postives = 103/223 (46.19%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYN----NQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQL----LNKRKLNRE--------------SQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+       N+E ++      V    + D +    N     +S G S  Y +   +   + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   NEQL    +N R L+ +              ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   23 DPAAAFLAQQESEIAGIE-------NDEGFSILDSGDVPSSLSQDQDGGAMNGDLHGESNGPSDVYAAISSVDRLQAEPESLRKWREEQRDRLEELDANSRKQEAEWKEKAKLELEEWHTRQNEQLEKTKVNNRVLDEDFYKQPFADLIGYVAAEEAMVSELDENSPGTEWERVARLCDFNPKSSK---------------QAKDVSRMRSVLISLKQAPLVR 223
[Close]
BLAST of Clathrin light chain vs. Ensembl Xenopus
Match: dbp (D site of albumin promoter (albumin D-box) binding protein [Source:Xenbase;Acc:XB-GENE-5995286])

HSP 1 Score: 72.7886 bits (177), Expect = 9.044e-15
Identity = 57/203 (28.08%), Postives = 95/203 (46.80%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDD---FKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            D  A FLA+++ ++  I++   F   +      + Q  D  T    D + N     ++ G +  Y +       + EPE I  WR E   R+   D   K++    +  A KELE+W    +E L   +  NR ++  FV + ++  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   19 DPAAAFLAQQESEIAGIENDEGFSILDSGEVPMSLQAGDGAT----DTVMNGDFYQETNGPTDGYAAISHADRLQAEPESIRKWREEQRSRLEMLDANSKKQETEWKDKAGKELEEWYARQDELLQKTKANNRAAEEAFVSDVEETSPGTEWERVARLCDFNPKSSKQ---------------AKDVSRMRSVLISLKQAPLV 202
[Close]
BLAST of Clathrin light chain vs. Ensembl Xenopus
Match: dbp (D site of albumin promoter (albumin D-box) binding protein [Source:Xenbase;Acc:XB-GENE-5995286])

HSP 1 Score: 64.6994 bits (156), Expect = 7.360e-12
Identity = 59/217 (27.19%), Postives = 97/217 (44.70%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDD---FKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLN-------------RESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I++   F   +      + Q  D  T    D + N     ++ G +  Y +       + EPE I  WR E   R+   D   K++    +  A KELE+W    +E LL K K N             + ++  FV + ++  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   19 DPAAAFLAQQESEIAGIENDEGFSILDSGEVPMSLQAGDGAT----DTVMNGDFYQETNGPTDGYAAISHADRLQAEPESIRKWREEQRSRLEMLDANSKKQETEWKDKAGKELEEWYARQDE-LLQKTKANNRTNINHPCYSLEQAAEEAFVSDVEETSPGTEWERVARLCDFNPKSSKQ---------------AKDVSRMRSVLISLKQAPLVH 215
[Close]
BLAST of Clathrin light chain vs. Ensembl Xenopus
Match: cltb (clathrin, light chain B [Source:NCBI gene;Acc:496489])

HSP 1 Score: 63.5438 bits (153), Expect = 1.896e-11
Identity = 58/205 (28.29%), Postives = 94/205 (45.85%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETFDNNDFIT---NETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+ D  F  V  +S   +    E  D NDF T   N     ++   S  Y +  +      EPE +  WR E + R+ + D   K   +     AKK+L++W    +EQ+   +  NR S      +  +   G+EW+RV ++C+FN + +                  KD SR++S+L+SLK  PL R
Sbjct:   19 DPAAAFLAQQESEIAGIENDEGFGVVQGDSPEEEP---EMVDFNDFGTIPMNGELYQETSDYSDGYAAIAQADRLTQEPESLRKWREEQKTRLEELDAASKVTEQEWREKAKKDLDEWYQRQSEQIEKNKVSNRASDEAMASDTKEEETGTEWERVARLCDFNPKSSKQ---------------SKDVSRLRSVLISLKQTPLSR 205
[Close]
BLAST of Clathrin light chain vs. Ensembl Xenopus
Match: dbp (D site of albumin promoter (albumin D-box) binding protein [Source:Xenbase;Acc:XB-GENE-5995286])

HSP 1 Score: 62.003 bits (149), Expect = 8.315e-11
Identity = 59/223 (26.46%), Postives = 96/223 (43.05%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDD---FKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRE-------------------SQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I++   F   +      + Q  D  T    D + N     ++ G +  Y +       + EPE I  WR E   R+   D   K++    +  A KELE+W    +E LL K K N                     ++  FV + ++  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   19 DPAAAFLAQQESEIAGIENDEGFSILDSGEVPMSLQAGDGAT----DTVMNGDFYQETNGPTDGYAAISHADRLQAEPESIRKWREEQRSRLEMLDANSKKQETEWKDKAGKELEEWYARQDE-LLQKTKANNRVADEAFYKQPFADVIGYVAAEEAFVSDVEETSPGTEWERVARLCDFNPKSSKQ---------------AKDVSRMRSVLISLKQAPLVH 221
[Close]
BLAST of Clathrin light chain vs. Ensembl Xenopus
Match: dbp (D site of albumin promoter (albumin D-box) binding protein [Source:Xenbase;Acc:XB-GENE-5995286])

HSP 1 Score: 58.151 bits (139), Expect = 2.163e-9
Identity = 59/235 (25.11%), Postives = 97/235 (41.28%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDD---FKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLN-------------------------------RESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I++   F   +      + Q  D  T    D + N     ++ G +  Y +       + EPE I  WR E   R+   D   K++    +  A KELE+W    +E LL K K N                               + ++  FV + ++  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   19 DPAAAFLAQQESEIAGIENDEGFSILDSGEVPMSLQAGDGAT----DTVMNGDFYQETNGPTDGYAAISHADRLQAEPESIRKWREEQRSRLEMLDANSKKQETEWKDKAGKELEEWYARQDE-LLQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVSDVEETSPGTEWERVARLCDFNPKSSKQ---------------AKDVSRMRSVLISLKQAPLVH 233
[Close]
BLAST of Clathrin light chain vs. Ensembl Mouse
Match: Clta (clathrin, light polypeptide (Lca) [Source:MGI Symbol;Acc:MGI:894297])

HSP 1 Score: 83.5741 bits (205), Expect = 1.013e-18
Identity = 61/201 (30.35%), Postives = 100/201 (49.75%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            D  A FLA+++ ++  I+ D  F  ++  +   Q       D  D + N     +S G + +Y +  E+   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +  NR ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   30 DPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGDAVDGVMNGEYYQESNGPTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLV 215
[Close]
BLAST of Clathrin light chain vs. Ensembl Mouse
Match: Clta (clathrin, light polypeptide (Lca) [Source:MGI Symbol;Acc:MGI:894297])

HSP 1 Score: 78.5666 bits (192), Expect = 6.691e-17
Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = 3 
Query:  174 DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            D  D + N     +S G + +Y +  E+   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +  NR ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   73 DAVDGVMNGEYYQESNGPTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLV 217
[Close]
BLAST of Clathrin light chain vs. Ensembl Mouse
Match: Clta (clathrin, light polypeptide (Lca) [Source:MGI Symbol;Acc:MGI:894297])

HSP 1 Score: 78.5666 bits (192), Expect = 6.691e-17
Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = 3 
Query:  174 DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            D  D + N     +S G + +Y +  E+   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +  NR ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   73 DAVDGVMNGEYYQESNGPTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLV 217
[Close]
BLAST of Clathrin light chain vs. Ensembl Mouse
Match: Cltb (clathrin, light polypeptide (Lcb) [Source:MGI Symbol;Acc:MGI:1921575])

HSP 1 Score: 73.559 bits (179), Expect = 3.692e-15
Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = 3 
Query:  156 DDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            +D  T  N D         ++ G +  Y +  +      EPE I  WR E ++R+ + D   K   +     AKK+LE+WN   +EQ+   +  NR S+  FVKE  +  PG+EW++V ++C+FN + +                  KD SR++S+L+SLK  PL R
Sbjct:   66 EDMSTTVNGDVF------QEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQC---------------KDVSRLRSVLMSLKQTPLSR 211
[Close]
BLAST of Clathrin light chain vs. Ensembl Mouse
Match: Clta (clathrin, light polypeptide (Lca) [Source:MGI Symbol;Acc:MGI:894297])

HSP 1 Score: 69.3218 bits (168), Expect = 2.117e-13
Identity = 60/216 (27.78%), Postives = 100/216 (46.30%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETF--DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRK------------LNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+ D  F  ++  +   Q         D  D + N     +S G + +Y +  E+   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +             L + ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   30 DPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVDGVMNGEYYQESNGPTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNSTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLVH 230
[Close]
BLAST of Clathrin light chain vs. UniProt/SwissProt
Match: sp|O08585|CLCA_MOUSE (Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.760e-12
Identity = 52/178 (29.21%), Postives = 82/178 (46.07%), Query Frame = 3 
Query:  174 DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLI 653
            D  D + N     +S G + +Y +  E+   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +  NR                   ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+
Sbjct:   72 DAVDGVMNGEYYQESNGPTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRVADEAFYKQPFADLIGYVAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQ---------------AKDVSRMRSVLISLKQAPLV 234
[Close]
BLAST of Clathrin light chain vs. UniProt/SwissProt
Match: sp|P08081|CLCA_RAT (Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.507e-11
Identity = 61/234 (26.07%), Postives = 100/234 (42.74%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDID-DFKFDEVNNESYNNQVDDFETF--DNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I+ D  F  ++  +   Q         D  D + N     +S G + +Y +  E+   + EPE I  WR E  ER+   D   +++    +  A KELE+W    +EQL   +  NR                               ++  FV + D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+ 
Sbjct:   30 DPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQAHGEPPGGPDAVDGVMNGEYYQESNGPTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAVKELEEWYARQDEQLQKTKASNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQA---------------KDVSRMRSVLISLKQAPLVH 248
[Close]
BLAST of Clathrin light chain vs. UniProt/SwissProt
Match: sp|Q9VWA1|CLC_DROME (Clathrin light chain OS=Drosophila melanogaster OX=7227 GN=Clc PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.380e-10
Identity = 72/221 (32.58%), Postives = 101/221 (45.70%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETREND--SYGQSMNYNSKPE--------------ISMP---RIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKL---NRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPL 650
            D  A+FLAREQ  LGD++     E+   S +            + +     E D  S G +    S                 IS P   R EPEKI  WR E ++R+ +KD EE+ +   L + +KKEL+DW     E + +K KL   N E Q   + E     PG+EW+R+ K+C+FN  P V+                KD SRM+SI L LK +P+
Sbjct:   14 DPAAEFLAREQSALGDLEA----EITGGSASAPPAASTDEGLGELLGGTASEGDLLSAGGTGGLESSTGSFEVIGGESNEPVGISGPPPSREEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESI-SKTKLASRNAEKQAATL-ENGTIEPGTEWERIAKLCDFN--PKVN-------------KAGKDVSRMRSIYLHLKQNPI 213
[Close]
BLAST of Clathrin light chain vs. UniProt/SwissProt
Match: sp|P08082|CLCB_RAT (Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.627e-10
Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = 3 
Query:  273 EPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            EPE I  WR E ++R+ + D   K   +     AKK+LE+WN   +EQ+   +  NR                   S+  FVKE  +  PG+EW++V ++C+FN + +                  KD SR++S+L+SLK  PL R
Sbjct:   99 EPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADTIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQC---------------KDVSRLRSVLMSLKQTPLSR 229
[Close]
BLAST of Clathrin light chain vs. UniProt/SwissProt
Match: sp|Q6IRU5|CLCB_MOUSE (Clathrin light chain B OS=Mus musculus OX=10090 GN=Cltb PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.978e-10
Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = 3 
Query:  273 EPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            EPE I  WR E ++R+ + D   K   +     AKK+LE+WN   +EQ+   +  NR                   S+  FVKE  +  PG+EW++V ++C+FN + +                  KD SR++S+L+SLK  PL R
Sbjct:   99 EPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADTIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQC---------------KDVSRLRSVLMSLKQTPLSR 229
[Close]
BLAST of Clathrin light chain vs. TrEMBL
Match: A0A1S3K6D6 (Clathrin light chain OS=Lingula unguis OX=7574 GN=LOC106179046 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.874e-28
Identity = 83/228 (36.40%), Postives = 118/228 (51.75%), Query Frame = 3 
Query:   36 IQKDMSDLIADFLAREQEQLGDIDD---------------FKFDE------VNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            I +  +D  A FLAREQ++L  ++D               F FD+          +   + D    +DN ++       ND  G S  Y++  ++   R EPEKI +WR + +ER+ KKD +E E+       AKKE+EDW  H  EQL   ++ NR ++  FVKERD+ IPG EW+++C++CEFN           P G      T KD SRM+SILL LK  PL+R
Sbjct:   17 ISQTEADPAAAFLAREQDELAGLEDDTFGVSGGQQSGGQDFGFDDDLEQPPQQQATSGGEFDSLGGYDNQEY-------NDMNGPSDTYSAISQVDRQRQEPEKIRLWREQQKERLEKKDADEAEKKEEWREAAKKEMEDWYKHRAEQLQKTKETNRAAEADFVKERDETIPGGEWEKICRLCEFN-----------PKGSK----TTKDISRMRSILLQLKQTPLVR 222
[Close]
BLAST of Clathrin light chain vs. TrEMBL
Match: A0A1S3K5T0 (Clathrin light chain OS=Lingula unguis OX=7574 GN=LOC106179046 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.026e-28
Identity = 83/229 (36.24%), Postives = 118/229 (51.53%), Query Frame = 3 
Query:   36 IQKDMSDLIADFLAREQEQLGDIDD---------------FKFD-------EVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            I +  +D  A FLAREQ++L  ++D               F FD       +    +   + D    +DN ++       ND  G S  Y++  ++   R EPEKI +WR + +ER+ KKD +E E+       AKKE+EDW  H  EQL   ++ NR ++  FVKERD+ IPG EW+++C++CEFN           P G      T KD SRM+SILL LK  PL+R
Sbjct:   17 ISQTEADPAAAFLAREQDELAGLEDDTFGVSGGQQSGGQDFGFDDDLEQPPQQQQATSGGEFDSLGGYDNQEY-------NDMNGPSDTYSAISQVDRQRQEPEKIRLWREQQKERLEKKDADEAEKKEEWREAAKKEMEDWYKHRAEQLQKTKETNRAAEADFVKERDETIPGGEWEKICRLCEFN-----------PKGSK----TTKDISRMRSILLQLKQTPLVR 223
[Close]
BLAST of Clathrin light chain vs. TrEMBL
Match: A0A1S3K660 (Clathrin light chain OS=Lingula unguis OX=7574 GN=LOC106179046 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.089e-27
Identity = 80/207 (38.65%), Postives = 116/207 (56.04%), Query Frame = 3 
Query:   36 IQKDMSDLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            I +  +D  A FLAREQ++L  ++D  F    +    +   DF  FD++  +    ++    G S  Y++  ++   R EPEKI +WR + +ER+ KKD +E E+       AKKE+EDW  H  EQL   ++ NR ++  FVKERD+ IPG EW+++C++CEFN           P G      T KD SRM+SILL LK  PL+R
Sbjct:   17 ISQTEADPAAAFLAREQDELAGLEDDTF--GVSGGQQSGGQDF-GFDDD--LEQPPQQQQMNGPSDTYSAISQVDRQRQEPEKIRLWREQQKERLEKKDADEAEKKEEWREAAKKEMEDWYKHRAEQLQKTKETNRAAEADFVKERDETIPGGEWEKICRLCEFN-----------PKGSK----TTKDISRMRSILLQLKQTPLVR 203
[Close]
BLAST of Clathrin light chain vs. TrEMBL
Match: A0A1S3K5T5 (Clathrin light chain OS=Lingula unguis OX=7574 GN=LOC106179046 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.036e-26
Identity = 80/207 (38.65%), Postives = 115/207 (55.56%), Query Frame = 3 
Query:   36 IQKDMSDLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            I +  +D  A FLAREQ++L  ++D  F    +    +   DF  FD++     +  +    G S  Y++  ++   R EPEKI +WR + +ER+ KKD +E E+       AKKE+EDW  H  EQL   ++ NR ++  FVKERD+ IPG EW+++C++CEFN           P G      T KD SRM+SILL LK  PL+R
Sbjct:   17 ISQTEADPAAAFLAREQDELAGLEDDTF--GVSGGQQSGGQDF-GFDDD---LEQPPQQQMNGPSDTYSAISQVDRQRQEPEKIRLWREQQKERLEKKDADEAEKKEEWREAAKKEMEDWYKHRAEQLQKTKETNRAAEADFVKERDETIPGGEWEKICRLCEFN-----------PKGSK----TTKDISRMRSILLQLKQTPLVR 202
[Close]
BLAST of Clathrin light chain vs. TrEMBL
Match: K1QUD6 (Clathrin light chain OS=Crassostrea gigas OX=29159 GN=CGI_10021336 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.746e-26
Identity = 79/211 (37.44%), Postives = 115/211 (54.50%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNN---------DFIT-NETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLAREQ +L  ++D   D V  +  N   + F+ FD+          DF+  N+  E+ S G S  Y++   +   R EPEK+ +WR E + R+ KKD EE ++       AKKEL+DW  HHNEQ+   R+ NR ++  F K+RD   PG EW+++C++CEFN + + +                KD SR++SILL LK  PL+R
Sbjct:   19 DPAAAFLAREQSELAGLED---DNVPQD--NGGGEQFDMFDDGEPQMMNGAPDFMGENQFEESQSNGPSDAYSAISSVDKERAEPEKLRIWREEQKMRLEKKDAEEAQKKEAWREAAKKELDDWYKHHNEQVQKTRETNRTAEEAFKKDRDTTQPGGEWEKICRICEFNPKNSKNT---------------KDVSRLRSILLQLKQTPLVR 209
[Close]
BLAST of Clathrin light chain vs. Ensembl Cavefish
Match: cltb (clathrin light chain B [Source:NCBI gene;Acc:103036957])

HSP 1 Score: 77.7962 bits (190), Expect = 1.197e-16
Identity = 56/166 (33.73%), Postives = 81/166 (48.80%), Query Frame = 3 
Query:  213 DSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            DS G + +Y +  ++   R EPE +  WR E + R+ + D   K      +  AKKEL DWN+H  EQ+   +  NR                   S+  F+KE D   PGSEW++V ++C+FN  P  S +              KD SRM+S+L+SLK  PL+R
Sbjct:   64 DSNGVTDSYAAIAQVDQLRQEPESLRKWREEQKTRLEELDSASKAAEVEWKEKAKKELVDWNLHQQEQMEKNKVNNRIADKAFYKQPNSDVIGFVASEDAFLKECDDDSPGSEWEKVARLCDFN--PKTSRQ-------------TKDVSRMRSVLISLKQTPLVR 214
[Close]
BLAST of Clathrin light chain vs. Ensembl Cavefish
Match: clta (clathrin light chain A [Source:NCBI gene;Acc:103024617])

HSP 1 Score: 75.485 bits (184), Expect = 6.243e-16
Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = 3 
Query:  210 NDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            ++S G S  Y +       + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   +EQL   +  NR ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   68 HESNGPSDAYAAISSADRLQAEPESLRKWREEQSDRLEELDANSRQQETEWKEKAKVELEEWHARQDEQLAKTKVNNRAAEEAMVSELDENNPGTEWERVARLCDFNPKSSK---------------QAKDVSRMRSVLISLKQSPLVR 201
[Close]
BLAST of Clathrin light chain vs. Ensembl Cavefish
Match: clta (clathrin light chain A [Source:NCBI gene;Acc:103024617])

HSP 1 Score: 63.929 bits (154), Expect = 8.730e-12
Identity = 48/167 (28.74%), Postives = 78/167 (46.71%), Query Frame = 3 
Query:  210 NDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            ++S G S  Y +       + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   +EQL   +  NR                   ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   68 HESNGPSDAYAAISSADRLQAEPESLRKWREEQSDRLEELDANSRQQETEWKEKAKVELEEWHARQDEQLAKTKVNNRVLDEDFYKQPFAHLIGYVAAEEAMVSELDENNPGTEWERVARLCDFNPKSSK---------------QAKDVSRMRSVLISLKQSPLVR 219
[Close]
BLAST of Clathrin light chain vs. Ensembl Cavefish
Match: clta (clathrin light chain A [Source:NCBI gene;Acc:103024617])

HSP 1 Score: 60.8474 bits (146), Expect = 1.451e-10
Identity = 49/179 (27.37%), Postives = 82/179 (45.81%), Query Frame = 3 
Query:  210 NDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQL----LNKR--------------------------KLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            ++S G S  Y +       + EPE +  WR E  +R+ + D   +++    +  AK ELE+W+   +EQL    +N R                          +L++ ++   V E D+  PG+EW+RV ++C+FN + +                  KD SRM+S+L+SLK  PL+R
Sbjct:   68 HESNGPSDAYAAISSADRLQAEPESLRKWREEQSDRLEELDANSRQQETEWKEKAKVELEEWHARQDEQLAKTKVNNRVLDEDFYKQPFAHLIGYVTHINHPCYRLDQAAEEAMVSELDENNPGTEWERVARLCDFNPKSSKQ---------------AKDVSRMRSVLISLKQSPLVR 231
[Close]
BLAST of Clathrin light chain vs. Ensembl Nematostella
Match: EDO30793 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZR4])

HSP 1 Score: 77.0258 bits (188), Expect = 5.802e-17
Identity = 68/203 (33.50%), Postives = 94/203 (46.31%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDI-DDFKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERD-QPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A+FLAREQ+ L ++ +D      + E     +   E    N F        D    S++  + P      IE E +  WR E   ++ K DEEEK  +      A KEL DW    NEQL   +  NR  +  FV ERD    PG+EW++VC+ C+FN +   +                KD SRM+SI L LK +PL+R
Sbjct:   17 DPAAEFLAREQDDLAELGEDLGGPNSDVEGVGFDMSGGEEPVMNGF-------EDEGESSVSQQTAPTPVTREIEHESVRKWREEKAAQLEKMDEEEKAEIEEWREQAHKELNDWYDRRNEQLGKTKNSNRADEESFVAERDDTSTPGTEWEKVCRACDFNPKATKNT---------------KDVSRMRSIFLQLKQNPLVR 197
[Close]
BLAST of Clathrin light chain vs. Ensembl Medaka
Match: cltb (clathrin light chain B [Source:NCBI gene;Acc:101175575])

HSP 1 Score: 97.8265 bits (242), Expect = 3.207e-24
Identity = 68/207 (32.85%), Postives = 106/207 (51.21%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDI----DDFKF--DEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I    D F    D  + ++ + Q  ++E F+      N     +S G + +Y +  ++ + R EPE +  WR E + R+   D   K         AKKELEDW++H NEQ+   +  NR S+  F+ E D   PGSEW+RV ++C+FN  P  + +              KD SRM+S+L+SLK  PL+R
Sbjct:   12 DPAAAFLAQQESEIAGIENDNDGFGALEDADSVQASHPQTVNYEGFEEEIAAVNGEIFQESNGPTDSYAAIAQVDIQRQEPESLRKWREEQKARLEALDSASKAAEVEWREKAKKELEDWHLHQNEQMEKNKANNRASEEAFLAETDSDAPGSEWERVARLCDFN--PKTNKQ-------------AKDVSRMRSVLISLKQTPLVR 203
[Close]
BLAST of Clathrin light chain vs. Ensembl Medaka
Match: cltb (clathrin light chain B [Source:NCBI gene;Acc:101175575])

HSP 1 Score: 92.4337 bits (228), Expect = 3.475e-22
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 3 
Query:  213 DSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            +S G + +Y +  ++ + R EPE +  WR E + R+   D   K         AKKELEDW++H NEQ+   +  NR S+  F+ E D   PGSEW+RV ++C+FN  P  + +              KD SRM+S+L+SLK  PL+R
Sbjct:   74 ESNGPTDSYAAIAQVDIQRQEPESLRKWREEQKARLEALDSASKAAEVEWREKAKKELEDWHLHQNEQMEKNKANNRASEEAFLAETDSDAPGSEWERVARLCDFN--PKTNKQ-------------AKDVSRMRSVLISLKQTPLVR 206
[Close]
BLAST of Clathrin light chain vs. Ensembl Medaka
Match: cltb (clathrin light chain B [Source:NCBI gene;Acc:101175575])

HSP 1 Score: 92.0485 bits (227), Expect = 5.795e-22
Identity = 70/214 (32.71%), Postives = 107/214 (50.00%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDI----DDFKF--DEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQL----LNKR---KLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I    D F    D  + ++ + Q  ++E F+      N     +S G + +Y +  ++ + R EPE +  WR E + R+   D   K         AKKELEDW++H NEQ+     N R    L R S+  F+ E D   PGSEW+RV ++C+FN  P  + +              KD SRM+S+L+SLK  PL+R
Sbjct:   12 DPAAAFLAQQESEIAGIENDNDGFGALEDADSVQASHPQTVNYEGFEEEIAAVNGEIFQESNGPTDSYAAIAQVDIQRQEPESLRKWREEQKARLEALDSASKAAEVEWREKAKKELEDWHLHQNEQMEKNKANNRLCPSLARASEEAFLAETDSDAPGSEWERVARLCDFN--PKTNKQ-------------AKDVSRMRSVLISLKQTPLVR 210
[Close]
BLAST of Clathrin light chain vs. Ensembl Medaka
Match: cltb (clathrin light chain B [Source:NCBI gene;Acc:101175575])

HSP 1 Score: 86.2705 bits (212), Expect = 8.113e-20
Identity = 68/225 (30.22%), Postives = 106/225 (47.11%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDI----DDFKF--DEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I    D F    D  + ++ + Q  ++E F+      N     +S G + +Y +  ++ + R EPE +  WR E + R+   D   K         AKKELEDW++H NEQ+   +  NR                   S+  F+ E D   PGSEW+RV ++C+FN  P  + +              KD SRM+S+L+SLK  PL+R
Sbjct:   12 DPAAAFLAQQESEIAGIENDNDGFGALEDADSVQASHPQTVNYEGFEEEIAAVNGEIFQESNGPTDSYAAIAQVDIQRQEPESLRKWREEQKARLEALDSASKAAEVEWREKAKKELEDWHLHQNEQMEKNKANNRIADKAFYKQPNSDVIGLVASEEAFLAETDSDAPGSEWERVARLCDFN--PKTNKQ-------------AKDVSRMRSVLISLKQTPLVR 221
[Close]
BLAST of Clathrin light chain vs. Ensembl Medaka
Match: cltb (clathrin light chain B [Source:NCBI gene;Acc:101175575])

HSP 1 Score: 83.9593 bits (206), Expect = 7.947e-19
Identity = 68/232 (29.31%), Postives = 106/232 (45.69%), Query Frame = 3 
Query:   54 DLIADFLAREQEQLGDI----DDFKF--DEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNR-------------------------ESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            D  A FLA+++ ++  I    D F    D  + ++ + Q  ++E F+      N     +S G + +Y +  ++ + R EPE +  WR E + R+   D   K         AKKELEDW++H NEQ+   +  NR                          S+  F+ E D   PGSEW+RV ++C+FN  P  + +              KD SRM+S+L+SLK  PL+R
Sbjct:   12 DPAAAFLAQQESEIAGIENDNDGFGALEDADSVQASHPQTVNYEGFEEEIAAVNGEIFQESNGPTDSYAAIAQVDIQRQEPESLRKWREEQKARLEALDSASKAAEVEWREKAKKELEDWHLHQNEQMEKNKANNRLCPSLARIADKAFYKQPNSDVIGLVASEEAFLAETDSDAPGSEWERVARLCDFN--PKTNKQ-------------AKDVSRMRSVLISLKQTPLVR 228
[Close]
BLAST of Clathrin light chain vs. Planmine SMEST
Match: SMESG000012224.1 (SMESG000012224.1)

HSP 1 Score: 370.933 bits (951), Expect = 4.216e-131
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 3 
Query:   48 MSDLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNETRENDSYGQSMNYNSKPEISMPRIEPEKILVWXXXXXXXXXXXXXXXXXXXXNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIRA 659
            MSDLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNE RENDSYGQSMNYNSKPEISMPRIEPEKILVWRREFEERIIKKDEEEKERMRNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIRA
Sbjct:    1 MSDLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITNEIRENDSYGQSMNYNSKPEISMPRIEPEKILVWRREFEERIIKKDEEEKERMRNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSEWQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIRA 204
[Close]
BLAST of Clathrin light chain vs. Planmine SMEST
Match: SMESG000019387.1 (SMESG000019387.1)

HSP 1 Score: 50.447 bits (119), Expect = 5.566e-8
Identity = 33/106 (31.13%), Postives = 49/106 (46.23%), Query Frame = 3 
Query:  372 AKKELEDWNVHHNEQLLNKRKLNRESQGVFVKER----------DQPIPGSE-WQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDPLIR 656
            A KEL DW + + EQL    K NRE     V E+          D  +  ++ W+ +CKMC F        KP      +      K+ +RM+ +L+SL+  PL+R
Sbjct:    3 ANKELHDWCLRYREQLRITVKNNREDNARLVMEQTKINETASKNDYHVKETKIWESICKMCNF--------KPASNNANASSPQNVKEATRMRELLMSLRHQPLVR 100
The following BLAST results are available for this feature:
BLAST of Clathrin light chain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CLTA2.861e-1629.56clathrin light chain A [Source:HGNC Symbol;Acc:HGN... [more]
CLTB6.634e-1535.94clathrin light chain B [Source:HGNC Symbol;Acc:HGN... [more]
CLTA4.205e-1437.23clathrin light chain A [Source:HGNC Symbol;Acc:HGN... [more]
CLTA1.029e-1227.31clathrin light chain A [Source:HGNC Symbol;Acc:HGN... [more]
CLTA1.029e-1227.31clathrin light chain A [Source:HGNC Symbol;Acc:HGN... [more]
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BLAST of Clathrin light chain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Clathrin light chain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Clc1.377e-1132.58gene:FBgn0024814 transcript:FBtr0332771[more]
Clc1.377e-1132.58gene:FBgn0024814 transcript:FBtr0300813[more]
Clc1.377e-1132.58gene:FBgn0024814 transcript:FBtr0301126[more]
Clc1.377e-1132.58gene:FBgn0024814 transcript:FBtr0074830[more]
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BLAST of Clathrin light chain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
clta3.242e-1729.27clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-... [more]
clta3.242e-1729.27clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-... [more]
cltb7.669e-1728.70clathrin, light chain B [Source:ZFIN;Acc:ZDB-GENE-... [more]
clta2.072e-1327.35clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-... [more]
clta2.072e-1327.35clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-... [more]
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BLAST of Clathrin light chain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dbp9.044e-1528.08D site of albumin promoter (albumin D-box) binding... [more]
dbp7.360e-1227.19D site of albumin promoter (albumin D-box) binding... [more]
cltb1.896e-1128.29clathrin, light chain B [Source:NCBI gene;Acc:4964... [more]
dbp8.315e-1126.46D site of albumin promoter (albumin D-box) binding... [more]
dbp2.163e-925.11D site of albumin promoter (albumin D-box) binding... [more]
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BLAST of Clathrin light chain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Clta1.013e-1830.35clathrin, light polypeptide (Lca) [Source:MGI Symb... [more]
Clta6.691e-1732.50clathrin, light polypeptide (Lca) [Source:MGI Symb... [more]
Clta6.691e-1732.50clathrin, light polypeptide (Lca) [Source:MGI Symb... [more]
Cltb3.692e-1531.14clathrin, light polypeptide (Lcb) [Source:MGI Symb... [more]
Clta2.117e-1327.78clathrin, light polypeptide (Lca) [Source:MGI Symb... [more]
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BLAST of Clathrin light chain vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|O08585|CLCA_MOUSE3.760e-1229.21Clathrin light chain A OS=Mus musculus OX=10090 GN... [more]
sp|P08081|CLCA_RAT4.507e-1126.07Clathrin light chain A OS=Rattus norvegicus OX=101... [more]
sp|Q9VWA1|CLC_DROME1.380e-1032.58Clathrin light chain OS=Drosophila melanogaster OX... [more]
sp|P08082|CLCB_RAT2.627e-1031.51Clathrin light chain B OS=Rattus norvegicus OX=101... [more]
sp|Q6IRU5|CLCB_MOUSE2.978e-1031.51Clathrin light chain B OS=Mus musculus OX=10090 GN... [more]
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BLAST of Clathrin light chain vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S3K6D61.874e-2836.40Clathrin light chain OS=Lingula unguis OX=7574 GN=... [more]
A0A1S3K5T02.026e-2836.24Clathrin light chain OS=Lingula unguis OX=7574 GN=... [more]
A0A1S3K6602.089e-2738.65Clathrin light chain OS=Lingula unguis OX=7574 GN=... [more]
A0A1S3K5T51.036e-2638.65Clathrin light chain OS=Lingula unguis OX=7574 GN=... [more]
K1QUD63.746e-2637.44Clathrin light chain OS=Crassostrea gigas OX=29159... [more]
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BLAST of Clathrin light chain vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
cltb1.197e-1633.73clathrin light chain B [Source:NCBI gene;Acc:10303... [more]
clta6.243e-1632.21clathrin light chain A [Source:NCBI gene;Acc:10302... [more]
clta8.730e-1228.74clathrin light chain A [Source:NCBI gene;Acc:10302... [more]
clta1.451e-1027.37clathrin light chain A [Source:NCBI gene;Acc:10302... [more]
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BLAST of Clathrin light chain vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Clathrin light chain vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Clathrin light chain vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO307935.802e-1733.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Clathrin light chain vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
cltb3.207e-2432.85clathrin light chain B [Source:NCBI gene;Acc:10117... [more]
cltb3.475e-2237.16clathrin light chain B [Source:NCBI gene;Acc:10117... [more]
cltb5.795e-2232.71clathrin light chain B [Source:NCBI gene;Acc:10117... [more]
cltb8.113e-2030.22clathrin light chain B [Source:NCBI gene;Acc:10117... [more]
cltb7.947e-1929.31clathrin light chain B [Source:NCBI gene;Acc:10117... [more]
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BLAST of Clathrin light chain vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000012224.14.216e-13199.51SMESG000012224.1[more]
SMESG000019387.15.566e-831.13SMESG000019387.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30009797 ID=SMED30009797|Name=Clathrin light chain|organism=Schmidtea mediterranea sexual|type=transcript|length=879bp
TTTTATTTAAATTTTACTTAATACTAGTGTAACGTATTCAAAAAGATATG
TCCGATTTAATTGCAGATTTTTTGGCTAGAGAACAAGAACAATTAGGTGA
TATTGATGATTTCAAGTTTGATGAAGTCAACAACGAAAGTTATAACAATC
AAGTTGACGATTTTGAAACATTTGATAACAATGATTTTATTACAAATGAA
ACTCGAGAAAATGATTCATATGGGCAGTCAATGAATTATAATTCAAAACC
AGAAATATCAATGCCACGGATTGAACCTGAAAAAATTTTAGTATGGCGAC
GAGAATTTGAAGAGCGAATTATTAAAAAAGACGAGGAAGAAAAGGAAAGA
ATGCGAAATCTGGAAAGAGATGCAAAAAAAGAACTCGAAGATTGGAATGT
TCACCATAACGAACAGTTGTTAAATAAGCGTAAACTGAATCGGGAATCCC
AGGGAGTATTTGTGAAAGAACGTGACCAACCGATTCCTGGAAGCGAATGG
CAAAGAGTTTGCAAAATGTGCGAATTTAACAGCCGGCCAGCTGTGTCAAT
CAAACCCGTCGTGCCGGGAGGAGAGAGCCTCCCCGTGTTCACTCCTAAAG
ATACGAGTAGAATGAAATCGATTTTGCTGTCATTGAAAACCGATCCGTTG
ATTAGGGCTTAGGCACAATTCTCAGGAACTCCAAAGTGCCTATTTGATCA
ATTTTGTATGTGAACTTGAATAAATTTGTGTTTTATTGATTGATTTACGG
TGTCATTTGTTTTATTACTATTACATTTTTTCAATATAATTTGATCACAT
TTGGTATTGATTTGAGATTATCTTTTCACTATTACTTTTAACTTCAATAA
AAATAATTTTATAGTTCCACAAAAAAAAA
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protein sequence of SMED30009797-orf-1

>SMED30009797-orf-1 ID=SMED30009797-orf-1|Name=SMED30009797-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=205bp
MSDLIADFLAREQEQLGDIDDFKFDEVNNESYNNQVDDFETFDNNDFITN
ETRENDSYGQSMNYNSKPEISMPRIEPEKILVWRREFEERIIKKDEEEKE
RMRNLERDAKKELEDWNVHHNEQLLNKRKLNRESQGVFVKERDQPIPGSE
WQRVCKMCEFNSRPAVSIKPVVPGGESLPVFTPKDTSRMKSILLSLKTDP
LIRA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000034epidermis
PLANA:0000070intestinal phagocyte
PLANA:0000101muscle cell
PLANA:0003001lateral region of the whole animal
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR000996Clathrin_L-chain
Vocabulary: biological process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: molecular function
TermDefinition
GO:0005198structural molecule activity
Vocabulary: cellular component
TermDefinition
GO:0030130clathrin coat of trans-Golgi network vesicle
GO:0030132clathrin coat of coated pit
GO:0005905clathrin-coated pit
GO:0016020membrane
GO:0030659cytoplasmic vesicle membrane
GO:0031410cytoplasmic vesicle
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..115
NoneNo IPR availablePANTHERPTHR10639:SF7CLATHRIN LIGHT CHAINcoord: 25..200
IPR000996Clathrin light chainPFAMPF01086Clathrin_lg_chcoord: 6..200
e-value: 4.7E-35
score: 121.7
IPR000996Clathrin light chainPANTHERPTHR10639CLATHRIN LIGHT CHAINcoord: 25..200
IPR000996Clathrin light chainPROSITEPS00581CLATHRIN_LIGHT_CHN_2coord: 184..197