Endoglin antigen
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30009630 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Endoglin antigen vs. TrEMBL
Match: A0A068X171 (Uncharacterized protein OS=Echinococcus granulosus OX=6210 GN=EgrG_000926400 PE=4 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 8.475e-55 Identity = 208/774 (26.87%), Postives = 314/774 (40.57%), Query Frame = 2 Query: 77 FQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNLCSCPGIT-------IFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDN---------------------------IIRKPSEIIASLKCVTTN----------EMVDVKCDMKRFSVCIHINEIEFPNFAE--------NIRKNLSKIFFSDRIIPNK-QFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCK--------SSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDF--------------------------LSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLIPHQTERWNIIHRGCAFKDSGFTSNFLQV------YDSTTITSAL----------------FPLFQI--------------------SNSENIFFKCIFRLCTTETWCKTDYDCSTNLDR-SYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLA 2005 + +D GPC GD+YC +RV NS+CS N+CFCQ FVAI+E ITCK LLT L C +D+DC V NSICHPGA C CP T YV H+ S++ C CK G CY E+S K++ C+CP T ++ N G + AF C I VD+GD+C+ V LCR S C G C+C+ PVYQ++L++HEC+ +Q ++ +C G C+++N + + D C +R DN I+ + SEI ++ T N MV V C S+ ++ P + + N L+ + +IP + +D D LA + + Q C +L + PCG+ + G +E+ + H+ + VD FD+ C ++ T A S ++ +I S+E QT P LSF A R + SPI+L+A + T +Y + C+A TS + II+RGC + GFT NFL D + A+ FP F I + S N+ C FRLC + WC + CS +R S ++ PP+ I + +SL+L I +S+ G C +C +++L +I + +G ++ L+ Sbjct: 28 LRSLDLGPCVEEGDFYCSRRVPNSFCSVTKNECFCQPAFVAIQEEYGITCKPLLTSLNCHVDKDCVHVKNSICHPGAGFCACPGGTAYVAQEHACHNVAENSNNSFCETCKQMNGICYHA-------ENSKKQEFGCACPFNTAMPLPQRLYASNDGSIAQWAF-CKAILVDVGDLCNQVDLLCRPRNSECSSLN-GGPKSCRCKPGFFPVYQQSLHYHECF-KQVLCETKDIPECYN-SGICVDLNGDGTPDDNFC--ARNGSTLDNQSLRHSLRDSGERMSTSYSHSWPALDVILEENSEIKGIMEVGTRNTGAKDDYCCKPMVQVTCSSN--SILVYFLPPTRPPYEQLHQSLVEGNAIAYLTGEGNAAVVIPRSCVLRLCDFGQDGD---LLAASEWEVGYSRQFCVNLDLGSSPARPPCGLTLSRNETVVGIKGLLEVRTDAHVWSSSVDMRFDLRCSVIPTAATANATTTTAAAANTATAGSALTSTPRINSQERQTSPSQQEGSWSQRLSDQWNLDNVRPTPAALDLSFKAFSATKRAVSSVLLASPIQLKATLFDPTVTYTTFVVESCYA--TSVATTSEVMHVEIINRGCPNTECGFTGNFLSYSLSQPGRDGMPLALAIKSPPSSSSLISIASSLFPAFVITTGLHPNQSFRTDSSAFHANTTSTNVRITCAFRLCARQAWCALPHPCSGLQERNSMTTFMPPK----IHFAVRSLILEIINPSPHESEKSNSLGSQSCSSVFCQPRIQLLLIMVSLGTMLCLS 777
BLAST of Endoglin antigen vs. TrEMBL
Match: A0A4E0RS07 (Uncharacterized protein OS=Fasciola hepatica OX=6192 GN=D915_000222 PE=4 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.687e-54 Identity = 160/587 (27.26%), Postives = 258/587 (43.95%), Query Frame = 2 Query: 35 PFILWILKNSSSDPFQV--VDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQCYSR-------------STNVTTNEHSSKKQNL-------------CSCPGITIFN-------------------------DNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAG---------YGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESST-DACICPLSR------KAIFYDNIIRKP---SEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPNFAENIRKNLSKIFFSDRIIPNKQFSVNGIQRDT--DPLCYLAPTANVFNSNLQ----LCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTS 1558 P + W+ K+ + ++ +D GPC GD +C +RV NS CS N+CFC+ +V+I+E ITCK+LLT+LKC +D DC ++NS CHPGA C CP+ T YV H+ + S+ CN+C+ G CY R TN H++ Q C CP T D L + + +F C I+V++G+ C+N+ LCR+ S C+ NE C C ++PVYQ +L ++EC+ +Q NH +C C + G C +MN ++ T C+CP R K I D+ P S + S C T + +V C VC N N + F PN F + T P A + N +++ C L + G+ PC + +YM+G+ YSGY+ + + + + LF +CK++N GQ +R+W + ++ I + + D ++ V+ + + +++PIRL+A+++ + Y + + C+A S Sbjct: 39 PGMYWLRKSQEKEYLRLRNLDIGPCLHEGDSFCTRRVANSMCSTEKNECFCKPGYVSIQESYGITCKTLLTNLKCQVDADCVHIFNSACHPGAGLCACPSGTIYVAQDHACQQMAEYESNIFCNKCRQVNGMCYKRDKTSAESPTILHSQTNSDDTYHAAWYQTHRSIRSLLLGYPYGCLCPYNTAMPLATPRRTWITNETHKKLPVRQADELDRLEDLPQWSF-CKAIFVNVGEYCNNIDVLCRAKFSHCIQNEDGSNRRGQSSPFVFTCTCAPGYVPVYQNHLGYYECF-QQIAANHTDCSACIKTGGRCFSMNLQNPTATGCLCPHDRAPGIASKPIGSDDSHGIPNFASSDVGSDSC--TESLAEVSCFRSHLEVCYRPPTQPPYNRLSNDLASQKAFAFVTDARPNLVFDDTCVLTPTTKHPFSLSAGLSPKLNESMKEDSLWCLVLDWRNDPGRQPCAVKVTEYMSGHLYSGYLAIVTDAEYQSPMRSMLFQFTCKTNNEIPQRVPGQVFERAWISENHDIDNSWSKVD---IALELVNQTGQSIETAFEYTPIRLRAQLHDQSGKYHALHMEACYASQAS 618
BLAST of Endoglin antigen vs. TrEMBL
Match: A0A068YE62 (Uncharacterized protein OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000926400 PE=4 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.116e-53 Identity = 205/779 (26.32%), Postives = 312/779 (40.05%), Query Frame = 2 Query: 77 FQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNLCSCPGIT-------IFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDN---------------------------IIRKPSEIIASLKCVTTNE----------MVDVKCDMKRFSVCIHINEIEFPNFAE--------NIRKNLSKIFFSDRIIPNK-QFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCK-------------SSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDF--------------------------LSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLIPHQTERWNIIHRGCAFKDSGFTSNFLQV------YDSTTITSAL----------------FPLFQI--------------------SNSENIFFKCIFRLCTTETWCKTDYDCSTNLDR-SYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLA 2005 + +D GPC GD+YC +RV NS+CS N+CFC FVAI+E ITCK LLT L C +D+DC V NSICHPGA C CP T YV H+ S++ C CK G CY E+S K++ C+CP T + N G + AF C I VD+G +C+ LCR S C G C+C+ PVYQ++L++HEC+ +Q ++ +C G C+++N + + D C +R DN I+ + SEI ++ T N MV V C R + ++ P + + N L+ ++ +IP + RD D LA + + Q C +L + PCG+ + G +E+ + H+ + VD FD+ C ++ TVG A+ ++ +I S+E QT P LSF A R + SPI+L+A + T +Y + C+A TS + II+RGC + GFT NFL D + A+ FP F + + S N+ C FRLC + WC + CS +R S ++ PP+ I + +SL+L I + + G C +C +++L +I + +G ++ L+ Sbjct: 28 LRSLDLGPCVEEGDFYCSRRVPNSFCSVTKNECFCHPAFVAIQEEYGITCKPLLTSLNCHVDKDCVHVKNSICHPGAGFCACPGGTAYVAQEHACHNVAENSNNSFCETCKQMNGICYHA-------ENSKKQEFGCACPFNTAMPLPQRLHASNGGPIAQWAF-CKAILVDVGHLCNQEDLLCRPRNSECSSLN-GGPKSCRCKPGFFPVYQQSLHYHECF-KQVLCETKDIPECYN-SGICVDLNGDGTPDDNFC--ARNGFTLDNQSLRHCLRESGERMSTSYSHNWPALDVILEENSEIKGIMEVGTQNAGVKDDYCRKPMVQVTCSSNR--ILVYFLPPTRPPYEQLHQSLVEGNAIAYLTGEGYAAVVIPRGCVLRLCDFGRDGD---LLAASEWEVGHSRQFCVNLDLGSSPARPPCGLTLSRNETVVGIKGLLEVRTDAHVWSSSVDMRFDLRCSVIPTAATASATTTTAAAANNATVGSAL-----TSTPRINSQERQTLPSQQEGSWSQRLSDQWNLDNVRPTPAALDLSFKAFSATKRAVSSVLLASPIQLKATLFDPTVTYNTFVVESCYA--TSVATTSEIMHVEIINRGCPNTECGFTGNFLSYSLSQPGRDGMPLALAIKSPPASSSLISIASSLFPAFVLTTGLHPNQSFRTDSSAFHANTTSTNVRITCAFRLCARQAWCALPHPCSGLQERNSMTTFMPPK----IHFAVRSLILEIINPSPHEFEKSNSLGSQSCSSVFCQPRIQLLLIMVSLGTMLCLS 777
BLAST of Endoglin antigen vs. TrEMBL
Match: A0A4S2M4V4 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_003951 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.738e-47 Identity = 148/578 (25.61%), Postives = 249/578 (43.08%), Query Frame = 2 Query: 23 FSIFPFILWILKNSSSDPFQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQCYSRSTNVT-------------TNEHSSKKQNL------CSCPGITIF-----------------------NDNLGENEENA-----FQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAG----YGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESS-TDACICPLSRKAIF--YDNIIRKPSEIIASLKCVTTNE-----MVDVKCDMKRFSVCIHI-NEIEFPNFAENIRKNLSKIFFSDRIIPNKQFSVNGIQRDTDPLCYLAPT----------ANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCW 1543 + F L+ +++ + + +D GPC GD +C +RV NS CS+ N+CFC+ +VAI+E +TCK+LL++LKC +D DC V NS+CHPGA C CP+ T YVP HS + C+ C+ G CY+ ++ + H + ++L C CP T N + +NE+ + C + V+IG+ C+++ LCR+ + C + + C C ++PVYQ NL +HEC+ Q NH +C QC + G C MNE ++ C CP R + F D R + SL E + +V C +C + + + + ++ + F SD + I + P C L P A + N C L + ++ PCG+ +YM+G+ YSGY+ + N + + F +CK++N GQ + + ++ ++ +I+ + + + +PIRL AK++ T +K + + C+ Sbjct: 32 YCAFTTALYAGEDAMNLRLRNLDLGPCLHEGDSFCTRRVANSMCSREKNECFCKPGYVAIQEIFGLTCKTLLSNLKCQVDNDCVHVANSVCHPGAGYCACPSGTIYVPQQHSCFPMAENDENQFCHHCRQINGVCYNNPRTLSEMVAETHQDQRDVNDAHEAFGKSLTRFPHGCKCPYNTAMPLAIPKTHVKTNNTSLRGSMGSSNQSKADNEDMSRLPQWSYCKAVLVNIGEFCNHIDLLCRAKNARCASTPVKSSSHPFLRCTCIEGYIPVYQYNLGYHECF-RQILTNHSSCLQCTRTGGKCYTMNERNALATGCQCPNHRSSTFGNLDVRDRNSEDAFPSLHSEENLESCAESLAEVSCFRNYLELCYKTPSHLPYNILSSHLINQRAIAFVSD----------SRINLNYRPECALTPVSAERLLERQRAVILNHTRIWCIQLDWRKQVENPPCGLRVTEYMSGHLYSGYLNIVINPEYAKAIENLFFRFTCKTNNEIPQQVPGQIFEHQPHLVAPLAWDNLPWSNSVRITMEVHNISGSLVETAFESTPIRLYAKLHERTGPFKAMQMENCY 598
BLAST of Endoglin antigen vs. TrEMBL
Match: A0A5K4F052 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 6.880e-45 Identity = 179/665 (26.92%), Postives = 284/665 (42.71%), Query Frame = 2 Query: 47 WILKNSSSDPFQVVDH---GPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQC--YSRSTNVTTNEHSSKKQNLCSCPGITIFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCM---------VNEIAGYG---------------------ICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEI-EFPNFAENIRKNLSKI-FFSDRIIPNK-QFSVNGIQRDTDP---------LCYLAP------------TANVFNSNLQL--------CRSLIYDEKNGKFPCGINTVQYMNGYF-YSGYIELWGNVHIPNLLVDKLFDVSCKS------------SNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNT---SHLIPHQTERWNIIHRGCAFKDSGFTSNFLQV-YDSTTITSALFPLFQISNSENIFFKCIFRLCT-----TETWCKTD 1771 WI+ Q ++ G CT +C ++V+NS C+ N+CFC+ FVAIRE +TCK+LLTDLKC +D+DC V S CHPGA C+CP T YVP H+ + S C+ C G C Y V T++ + C CP + + + ++ + C+ VDIG CD+ + CRS S+C N++ + CQC+ +LPVYQ NL ++EC+ + + C++C G C ++N++ D C CP S +I Y ++ SEI C T + V V C SVC + + + N +++ + S + SD + + ++G+ + + LC L T ++ + N L C ++ KNG CGI + + Y G +E+ N I DK+ + C S N++T+ T+ A + P S +I++ N + F+ S +RL A + + SYKHI+A+ C+ N S T I HR C K T+ F + + + + +F F++ N +FF C+FR+C +T CKTD Sbjct: 18 WIIAAPEERSVQKTENLAIGACTQYDSGFCSRQVENSVCNHEKNECFCRKGFVAIRENGRVTCKTLLTDLKCRVDRDCVHVNRSSCHPGAGYCSCPGNTIYVPEKHACRARFTYPSDPFCDVCLQLKGTCFKYELFERVITDQRVNPNGVGCVCPDHKV-SISTRTSDPLKYMCDGNLVDIGSECDDESLFCRSINSVCKPLQEELLLSTNQLHSFKSNLWSENFPSGDHLRRSQIIRTCQCKPGYLPVYQINLKYNECF-KILPMKAKYCQKCVDTGGQCYDLNDDGIGDGCDCPPSLSSIIYG---KENSEIY----CGTVH--VSVNCTNGYLSVCYYPHTYGPYSNLFDDLMNHRSVVRLASDNYLTDTLPLQISGLSSEANRTYHYSNFQNLCILKSENDTIDIGNTFVTESISHDNYHLHGAQTKRFCLNIDVWRKNGL--CGIRLYKLSHDTVQYEGILEVLVNTSIRTPSRDKIIPLKCISRTPNRPMNEINDGNLQTIGTMNLANTPTHPQISLRILNEN---------------NKEIPSTFVG-SRVRLDALLFNPSGSYKHIAAEYCYGNNRSLHSDYFSSDTSTLLIDHR-CLHKKPLLTAKFSSIGLLNGHLQTEIFQAFRLGNMTLVFFTCVFRICQLSTDCEQTRCKTD 652
BLAST of Endoglin antigen vs. Planmine SMEST
Match: SMESG000024282.1 (SMESG000024282.1) HSP 1 Score: 1612.82 bits (4175), Expect = 0.000e+0 Identity = 790/791 (99.87%), Postives = 791/791 (100.00%), Query Frame = 2 Query: 8 MLAKRFSIFPFILWILKNSSSDPFQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHXXXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNLCSCPGITIFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPNFAENIRKNLSKIFFSDRIIPNKQFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLIPHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTTITSALFPLFQISNSENIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLATAIFLLLCYRQKIIRDINRCQRLSSRTVNVNTTSRQQQLNLLTSSNCNPVDCSSYMLVPVAHRSHHCQPVSFSYDRTDLYEAPLFINSSVCTVNRDSDLNNDRNPIFTSNHHNEIITINNSGDDL 2380 MLAKRFSIFPFILWILKNSSSDPFQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHSCESESLSSSFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNLCSCPGITIFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPNFAENIRKNLSKIFFSDRIIPNKQFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLIPHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTTITSALFPLFQISNS+NIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLATAIFLLLCYRQKIIRDINRCQRLSSRTVNVNTTSRQQQLNLLTSSNCNPVDCSSYMLVPVAHRSHHCQPVSFSYDRTDLYEAPLFINSSVCTVNRDSDLNNDRNPIFTSNHHNEIITINNSGDDL Sbjct: 1 MLAKRFSIFPFILWILKNSSSDPFQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHSCESESLSSSFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNLCSCPGITIFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPNFAENIRKNLSKIFFSDRIIPNKQFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLIPHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTTITSALFPLFQISNSQNIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLATAIFLLLCYRQKIIRDINRCQRLSSRTVNVNTTSRQQQLNLLTSSNCNPVDCSSYMLVPVAHRSHHCQPVSFSYDRTDLYEAPLFINSSVCTVNRDSDLNNDRNPIFTSNHHNEIITINNSGDDL 791
BLAST of Endoglin antigen vs. Planmine SMEST
Match: SMESG000068315.1 (SMESG000068315.1) HSP 1 Score: 352.058 bits (902), Expect = 9.990e-109 Identity = 226/683 (33.09%), Postives = 352/683 (51.54%), Query Frame = 2 Query: 77 FQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX---XXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNL--------CSCPGITIFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPN---FAENIRKNLSKIFFSDRIIPNKQFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQI-VSREFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLIPHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTT-------------ITSALFPLFQISNSENIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGL-SECHYFWCVTKLKLAIISMIIGGIVLLATAIFLLLCYRQ 2038 + VV GPC G+ +C+++V NS+C + NKC+C+ FV I+E +TCK LLT+LKC MD++C DV S CHPGA CTCP T YVP H+ + + +C +CK GG+C+ + TN N HS N CSCPGIT + ++ +A CN+I VDIG C+N+ +CRS K++C + Y IC C H+ VYQ+ L +HECY + N +CR C + G C +MN + D C C K + D SL + +V++ C + +C + + PN F +NI K + IF +D + F + + + L + T +++++ C + PCGI+ +Y NGY YSGY+ +W + + + + D+L D SCK T GQAIDRSWP + + +RE T +F +FS ++ +N + K +PI+L A +N Y I+A+ CW N+S +W +I+RGC SGFT+ FL +S + ++S FP F + +S + FKC+FR C + WC C+ + + +++ PPP+ DI+++ KS +++ + S SR G+ S C +FWC+ KL ++ ++ I+LL TA+ +L R Sbjct: 24 YDVVHPGPCLEYGNRFCEEKVANSFCLKKKNKCYCKPQFVNIKESYGVTCKPLLTNLKCNMDKNCRDVDGSTCHPGAGACTCPYNTLYVPQLHACKKQILSPENDAILCIKCKEIGGECF-QYTNQIGNIHSYPVSNAGNNFPHIGCSCPGITTIQSDKVDDLSDAI-CNQILVDIGHPCNNMDLICRSSKAVCFETSLFSYSICHCPPGHVAVYQEYLGYHECYPSIKL-NVDSCRLCLRTNGLCFDMNADEQPDGCYCG-RLKTVQEDFKANGAHNDQNSLLQTCSKNIVEIFCWPENLKICYY--PPKAPNHARFIDNITKQRALIFITDG---HSLFREDDSGPNNECLLTIEETHRSRDNSIRFCIEKQLNTLEVNLPCGISATKYSNGYLYSGYVAVWVDKYFADPISDQLIDFSCKCDYSFLRMTPGQAIDRSWPVENINLNYNRESNTTTEFFNFSILNPDNSVVYSVFKMAPIKLYAVLNTEEIEYNSIAAESCWCTNSSD-DSSPNNKWKLINRGCIESRSGFTTPFLLSSNSASTNQSNPDRKAFVELSSGFFPAFTMFDSSQLIFKCLFRFCKHKHWCSLRKQCTDDHPQFFTT-PPPKRFDDIRFLVKSFKVSVVSVPKVDSVSR--GGVKSVCSFFWCLPGDKLLLVISLLTVILLLVTALAFVLFRRH 693
BLAST of Endoglin antigen vs. Planmine SMEST
Match: SMESG000025327.1 (SMESG000025327.1) HSP 1 Score: 239.965 bits (611), Expect = 2.257e-67 Identity = 183/653 (28.02%), Postives = 299/653 (45.79%), Query Frame = 2 Query: 95 GPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTH--XXXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNLCSCPGITIFNDNLGENEENAFQCNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIFYDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCI--HINEIEFPNFAENIRKNLSKIFF------SDRIIP--NKQFSVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDR--SWPATSYQIVSR-EFQTDPDFLSFSAVDINNRMSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNT--SHLIPHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTT----ITSALFPLFQI-SNSENIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRI----KNGLSECHYFWCVTKLKLAIIS 1975 G C GD YC QRV NS+CS N+CFC+ V++++ CK LLT++KC +D DCTDV SICHPGA CTCP T +VP H + +C CKN G C+ + T N+ + K LCS G ++ N C + +DIGD C++ +CRS K++C + +C C + + VYQ +L ++EC I + C++C G C + S C C R + D I ++ +S +V + C+ KR VC H N + N + KN +K+F +D +P N + NG +C L + ++ + C + ++ PCG+ ++Y NG YSG +++W + P D F+++CKS + + +GQ++DR S + I S EF + P ++N ++ I + I++ + + I + C+ N S P + II RGC+ + N + + S+LFP FQ+ EN++++C+ ++C TWCK +C R +S + N D+K++ +S+ L + S RI +N C Y C++ L++I+ Sbjct: 32 GECAQDGDSYCLQRVPNSFCSLEKNECFCKVGHVSVQDDGGTVCKPLLTNVKCRLDTDCTDVKGSICHPGAGFCTCPEGTIFVPQRHQCMKRVHWSVQNNLCKACKNIKGTCFQEELDSTNNDTTLKFGCLCS--GKNAMPTKFIDDFSNV--CEALLMDIGDFCNDQYLICRSPKAVCKRRTGSIENVCLCSQDSIAVYQYHLKYYEC-IPKLSFKDVGCQKCYSKGGQCYVNSVTSRKLQCDCGRLRISQLRDLRITDSDDVCSS-------SLVYISCNYKRLQVCYVPHSNP-PYGNLQSALDKNQAKVFLSSDSSENDESLPNFNNAYQENGESSFHHNMCQLKLMRSQTSTQDKYCIDI--SLRSSVLPCGLIQMKYKNGNMYSGLLQIWTDSKFPTPSRDMKFEINCKSQPNKPTNQLGQSLDRTESMFGKDFSISSNGEFLSTPQITLKILNSLDNEITTIDIG-TAIKIDILLVDRNAEFNGIEVESCYVSNISFSKFDPIKHSEQFIIDRGCSVSNFPLFQNLFSDAKIPSTPVHLQSSLFPAFQVFPKDENVYYRCLLKVCRHTTWCKKPTNCQEKSHRKFSIN----NEGDVKFVVRSIKLQVRSFDDNISPVRINQRKENYNHVCQYPMCLSLGHLSMIA 664
BLAST of Endoglin antigen vs. Planmine SMEST
Match: SMESG000039966.1 (SMESG000039966.1) HSP 1 Score: 226.483 bits (576), Expect = 4.775e-63 Identity = 183/684 (26.75%), Postives = 317/684 (46.35%), Query Frame = 2 Query: 68 SDPFQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNL----CSCPGITIFNDNLGENEENAFQ-----CNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIF--YDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPNFAENIRKNLSKIFFSDRIIPNKQF-SVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYM--NGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSRE--FQTDPDFLSFSAVDINNR-----------MSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLI---PHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTTITSALFPLFQISNSENIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLATAIFLLL 2026 +D F +V GPC G YCQ V NS+CS+ N+CFCQ+ FVAI+E+ + CK+LLTDLKC D+DC DVY S CHPG +C+CPA+TFYV H + +C C+N GG+CY N + KQN+ C+CPG I + NE++ C I VD+G C++ CR+ + C + + Y +C C + ++ VYQ L ++ECY + + + C C+ +G+CI++N + + D+C C K+I D + +P + ++M+ +KC VCI+ N+ P I + + IF+++ + + F SV G+++ C+ Q+ + + ++ F +T+ + N +YS ++ + + I + + D +++SCK+ R+ ++GQ ++SW +I S E +T D LS VD ++ D F+K ++ + + S + +++ S + P+Q E N+ AF T+ + + + S FP F + + F C+FRLC + C +++ + P + DIK++ IG + S K C C+T ++ I + + + +L + I +L Sbjct: 19 ADNFHIVASGPCLKKGKNYCQNIVPNSFCSEEKNECFCQNGFVAIKEKNGLICKTLLTDLKCSTDRDCKDVYGSSCHPGPGQCSCPAETFYVAQEHVCKDYPKNIPDPLCKHCRNIGGKCY---FNTISPLSVIPKQNIYSGKCNCPG--ILSTPTATNEKSQLMPSLEICQGIMVDLGSYCNDYDITCRAKIAECAHSTVMKYKVCVCPKDYIAVYQHYLKYYECY-PKIERLTKFCEHCQNSQGSCIDVNSDGNEDSCYCG-KWKSISNQEDTELSQP---------ICKDDMLIIKCSSVHLEVCIN-NDKYIPKKRMAISEYSTGIFYTNLVSKSTNFCSVTGLRKSKSLTCF------------QMSKPI----QSTSFENNCSTISFGQDNSVYYSTFLFIPMDKFIFDPINDFNYEISCKADFKRSNPSMGQITEKSWKG---EINSIEPLIETMEDLLSLKVVDFQSKTLKEVKIEQMFALDVFMKKRNVKFNYFLPEKCSLINGKSNQVIYSRIKSISMSSSPNQNE-LNMF----AFS----TTPKVDQNEPHKLRSNYFPAFMLKSKGISTFSCVFRLCQDSSMCNQNFEWKSQNKEEIKI---PASHDDIKFVESHFEFFIGDENCCTRTSVAKENKVPCSDSLCLTPAQILTIVISVCTLTILLSFITPIL 654
BLAST of Endoglin antigen vs. Planmine SMEST
Match: SMESG000039966.1 (SMESG000039966.1) HSP 1 Score: 226.483 bits (576), Expect = 6.482e-63 Identity = 179/680 (26.32%), Postives = 309/680 (45.44%), Query Frame = 2 Query: 68 SDPFQVVDHGPCTTGGDYYCQQRVKNSYCSQATNKCFCQSNFVAIRERESITCKSLLTDLKCGMDQDCTDVYNSICHPGASECTCPAQTFYVPGTHX-XXXXXXXXXFMCNQCKNSGGQCYSRSTNVTTNEHSSKKQNL----CSCPGITIFNDNLGENEENAFQ-----CNKIWVDIGDICDNVTRLCRSHKSLCMVNEIAGYGICQCRRYHLPVYQKNLNFHECYIEQQDNNHRNCRQCKQIEGACINMNEESSTDACICPLSRKAIF--YDNIIRKPSEIIASLKCVTTNEMVDVKCDMKRFSVCIHINEIEFPNFAENIRKNLSKIFFSDRIIPNKQF-SVNGIQRDTDPLCYLAPTANVFNSNLQLCRSLIYDEKNGKFPCGINTVQYMNGYFYSGYIELWGNVHIPNLLVDKLFDVSCKSSNIRTVDTVGQAIDRSWPATSYQIVSREFQTDPDFLSFSAVDINNR-----------MSDFFIKFSPIRLQAKVNPNTTSYKHISADLCWAQNTSHLI---PHQTERWNIIHRGCAFKDSGFTSNFLQVYDSTTITSALFPLFQISNSENIFFKCIFRLCTTETWCKTDYDCSTNLDRSYSSDPPPQNMYDIKYISKSLVLTIGLQKQFQSDSRIKNGLSECHYFWCVTKLKLAIISMIIGGIVLLATAIFLLL 2026 +D F +V GPC G YCQ V NS+CS+ N+CFCQ+ FVAI+E+ + CK+LLTDLKC D+DC DVY S CHPG +C+CPA+TFYV H + +C C+N GG+CY N + KQN+ C+CPG I + NE++ C I VD+G C++ CR+ + C + + Y +C C + ++ VYQ L ++ECY + + + C C+ +G+CI++N + + D+C C K+I D + +P + ++M+ +KC VCI+ N+ P I + + IF+++ + + F SV G+++ C+ S C ++ + + N +YS ++ + + I + + D +++SCK+ R+ ++GQ ++SW + +T D LS VD ++ D F+K ++ + + S + +++ S + P+Q E N+ AF T+ + + + S FP F + + F C+FRLC + C +++ + P + DIK++ IG + S K C C+T ++ I + + + +L + I +L Sbjct: 27 ADNFHIVASGPCLKKGKNYCQNIVPNSFCSEEKNECFCQNGFVAIKEKNGLICKTLLTDLKCSTDRDCKDVYGSSCHPGPGQCSCPAETFYVAQEHVCKDYPKNIPDPLCKHCRNIGGKCY---FNTISPLSVIPKQNIYSGKCNCPG--ILSTPTATNEKSQLMPSLEICQGIMVDLGSYCNDYDITCRAKIAECAHSTVMKYKVCVCPKDYIAVYQHYLKYYECY-PKIERLTKFCEHCQNSQGSCIDVNSDGNEDSCYCG-KWKSISNQEDTELSQP---------ICKDDMLIIKCSSVHLEVCIN-NDKYIPKKRMAISEYSTGIFYTNLVSKSTNFCSVTGLRKSKSLTCFQMSKPIQSTSFENNCSTISFGQD--------------NSVYYSTFLFIPMDKFIFDPINDFNYEISCKADFKRSNPSMGQITEKSWKG-EINSIEPLIETMEDLLSLKVVDFQSKTLKEVKIEQMFALDVFMKKRNVKFNYFLPEKCSLINGKSNQVIYSRIKSISMSSSPNQNE-LNMF----AFS----TTPKVDQNEPHKLRSNYFPAFMLKSKGISTFSCVFRLCQDSSMCNQNFEWKSQNKEEIKI---PASHDDIKFVESHFEFFIGDENCCTRTSVAKENKVPCSDSLCLTPAQILTIVISVCTLTILLSFITPIL 662 The following BLAST results are available for this feature:
BLAST of Endoglin antigen vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Endoglin antigen vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Endoglin antigen vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Endoglin antigen vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Endoglin antigen vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Endoglin antigen vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30009630 ID=SMED30009630|Name=Endoglin antigen|organism=Schmidtea mediterranea sexual|type=transcript|length=2414bpback to top protein sequence of SMED30009630-orf-1 >SMED30009630-orf-1 ID=SMED30009630-orf-1|Name=SMED30009630-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=792bp MLAKRFSIFPFILWILKNSSSDPFQVVDHGPCTTGGDYYCQQRVKNSYCSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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