transmembrane protein 39A
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30009594 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of transmembrane protein 39A vs. Ensembl Human
Match: TMEM39A (transmembrane protein 39A [Source:HGNC Symbol;Acc:HGNC:25600]) HSP 1 Score: 159.458 bits (402), Expect = 7.794e-42 Identity = 81/228 (35.53%), Postives = 140/228 (61.40%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFN + +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + H RF+ F+ LRL+N++ + ++ +Q L+++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 261 HSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYS 477 HSP 2 Score: 61.2326 bits (147), Expect = 2.863e-9 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P +LF F+ ++ L A +QY+++Y+TVWW P +H +LNF+LID HL ++ VM Sbjct: 59 VRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Human
Match: TMEM39B (transmembrane protein 39B [Source:HGNC Symbol;Acc:HGNC:25510]) HSP 1 Score: 128.642 bits (322), Expect = 4.846e-31 Identity = 81/229 (35.37%), Postives = 137/229 (59.83%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIW-CGQHVFVTAVTAFLLYSVQHLTPA-YVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCY 1711 H C ++P IR EVE LK DFN + +++ ++ + +Y + VP+ FV N +YD W C + V+ T+ +L +QHL PA Y D+LH+ A HLG W++ + +NV + W++ M+PQG LVKH K +++AVG +N A P + H RF FF LR++N++ L ++++Q L+ + +W++ IS+ ++F N ++ +K+LR+R +LG+ Y Sbjct: 262 HACCLSPSLIRSEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVK-----------NTHYYDKRWSCELFLLVSISTSVIL--MQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSKPLRILNILLLLEGAVIVYQLYSLMSSEKWHQTISLALILFSNYYAFFKLLRDRLVLGKAY 477 HSP 2 Score: 50.447 bits (119), Expect = 7.127e-6 Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 2 Query: 134 NPQVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSH--AKKALNFYLIDTHLV 352 +P +++ L+H IP +P +LF L A + Y+++Y+TVWW P SH + +LNF+LID +L+ Sbjct: 53 SPPLATQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLL 127
BLAST of transmembrane protein 39A vs. Ensembl Human
Match: TMEM39A (transmembrane protein 39A [Source:HGNC Symbol;Acc:HGNC:25600]) HSP 1 Score: 61.2326 bits (147), Expect = 1.348e-10 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P +LF F+ ++ L A +QY+++Y+TVWW P +H +LNF+LID HL ++ VM Sbjct: 59 VRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Human
Match: TMEM39A (transmembrane protein 39A [Source:HGNC Symbol;Acc:HGNC:25600]) HSP 1 Score: 60.8474 bits (146), Expect = 2.004e-10 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P +LF F+ ++ L A +QY+++Y+TVWW P +H +LNF+LID HL ++ VM Sbjct: 59 VRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Human
Match: TMEM39A (transmembrane protein 39A [Source:HGNC Symbol;Acc:HGNC:25600]) HSP 1 Score: 60.077 bits (144), Expect = 8.551e-10 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSH--AKKALNFYLIDTHLVGYLIVM 370 ++H IP +P +LF F+ ++ L A +QY+++Y+TVWW P +H + +LNF+LID HL ++ VM Sbjct: 59 VRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Celegans
Match: D1007.5 (pep chromosome:WBcel235:I:4580692:4583810:-1 gene:WBGene00017003.1 transcript:D1007.5a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:D1007.5) HSP 1 Score: 115.546 bits (288), Expect = 4.143e-27 Identity = 74/244 (30.33%), Postives = 125/244 (51.23%), Query Frame = 2 Query: 1028 VQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPA-YVDVLHRCALHLGRWRREEG---------RSANVPYNTWSQLQMFPQGTLVKHVKG-LFRAVGIHN----SAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 V H C+ +P +IREE+++L D + + F + T F + ++P +FVP G + I + +W Q V +TAF LY V +L+P Y+D+LHR A+HLG W + EG SA P WS+ ++ G V+ G +RA ++ +A P ++ HN FF LIN+MCS +++ Q+ +L+ +W +++ +MF N K+ +++ +L R Y+ Sbjct: 225 VLHMCSDSPAQIREEIQVLIDDLVLRVKKSIFAGVSTAFLSIMLPCIFVPFKTSQG---IPQKILINEVWECQLAIVVGLTAFSLY-VAYLSPLNYLDLLHRAAIHLGSWHQIEGPRIGHTGSMSSAPTP---WSEFCLYNDGETVQMPDGRCYRAKSSNSIRTVAAHPESSRHNTFFKVLRKPNNLINIMCSFEFLLIFIQFWMLVLTNDWQHIVTFVLLMFANYLLFAKLFKDKIILSRIYE 461
BLAST of transmembrane protein 39A vs. Ensembl Celegans
Match: D1007.5 (pep chromosome:WBcel235:I:4580733:4583810:-1 gene:WBGene00017003.1 transcript:D1007.5b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:D1007.5) HSP 1 Score: 88.1965 bits (217), Expect = 2.121e-18 Identity = 59/179 (32.96%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 1028 VQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPA-YVDVLHRCALHLGRWRREEG---------RSANVPYNTWSQLQMFPQGTLVKHVKG-LFRAVGIHN----SAEPGNNMHNRFFC 1519 V H C+ +P +IREE+++L D + + F + T F + ++P +FVP G + I + +W Q V +TAF LY V +L+P Y+D+LHR A+HLG W + EG SA P WS+ ++ G V+ G +RA ++ +A P ++ HN FFC Sbjct: 225 VLHMCSDSPAQIREEIQVLIDDLVLRVKKSIFAGVSTAFLSIMLPCIFVPFKTSQG---IPQKILINEVWECQLAIVVGLTAFSLY-VAYLSPLNYLDLLHRAAIHLGSWHQIEGPRIGHTGSMSSAPTP---WSEFCLYNDGETVQMPDGRCYRAKSSNSIRTVAAHPESSRHNTFFC 396
BLAST of transmembrane protein 39A vs. Ensembl Fly
Match: CG13016 (gene:FBgn0033899 transcript:FBtr0087519) HSP 1 Score: 125.176 bits (313), Expect = 1.639e-30 Identity = 71/236 (30.08%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGRSA------NVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAIL-IQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEE 1720 H+CT NP IR+EVE L+ DFN++F+ + F ++ +Y LVP + ++ Y+ + QH + + AF L +V Y D LHR LHLG W+R + A TWS+ + GT+VKH GL+R+ G+ A PGN H RF+ F+ + + + L +L+ + L ++ EW+ ++S+ + F ++ + +K++R+ + YK E Sbjct: 202 HSCTTNPVNIRDEVETLRHDFNKRFKQLIFTSMLNAYYTGLVP------------CCLAVSVQYNVLRAAQHCIIVCLGAFSLCAVFLYPAKYSDTLHRATLHLGCWQRIDREPAPSQLIVAASALTWSKYSSYNHGTVVKHNGGLYRSHGMVTVATPGNASHARFYKLFHNPTIIYSTLAILQAAVLLVEIGSLSAESVEWHFVLSISFVAFTSMGAFFKLVRDYLITKDLYKAE 425 HSP 2 Score: 58.5362 bits (140), Expect = 8.961e-9 Identity = 40/148 (27.03%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 140 QVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYXXXXXXXXXXXXXXXXXGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIY 583 Q + A + KH P + L I F++ + ++Q++++YRT WWLPQ+H + +N LID +L L+++ +Y + + +K +I G + ++ F + +Y K LL LFYP + Y LI+ Sbjct: 30 QSQTPATAMPKHIPFPEHATTSEWLSELIMCAFTMGSAIVQFINIYRTNWWLPQAHTRHMVNIELIDPYLRYLLLILNTRRLIYCLLLVKIRKRNEKSRHLIRLGIKYGFGGLVQLSLGFCAMKLYQKHTYILLLFLFYPVVIYLLIF 177
BLAST of transmembrane protein 39A vs. Ensembl Zebrafish
Match: tmem39a (transmembrane protein 39A [Source:NCBI gene;Acc:323208]) HSP 1 Score: 176.407 bits (446), Expect = 4.375e-48 Identity = 84/226 (37.17%), Postives = 136/226 (60.18%), Query Frame = 2 Query: 1040 CTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 C +PE IR EV+ LK DFNR+ +++ F +L + +Y + +PL FV +YD W +H+ + + AF++ L P Y D+LHRCA HLGRW+R E G +N P +TWS ++PQG LV+H + L++AVG +N A P + H RF+ F+ LRL+NV+ + ++++Q L+++ W +S+G ++ N + L+K+LR+R +LG+ Y Sbjct: 254 CPPSPELIRSEVQQLKTDFNRRIKEVLFNSLLSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLMSHLLPPHYCDLLHRCAAHLGRWQRLEPGSCSNTPQHTWSDSTIWPQGVLVRHSRCLYKAVGPYNVALPSDVSHARFYFLFHKPLRLLNVLIGIECSVVVYQLYSLLRSERWNHTLSLGLILVCNYYVLFKLLRDRLVLGKAYS 468
BLAST of transmembrane protein 39A vs. Ensembl Zebrafish
Match: tmem39b (transmembrane protein 39B [Source:NCBI gene;Acc:334110]) HSP 1 Score: 134.035 bits (336), Expect = 3.983e-33 Identity = 73/235 (31.06%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNN 1735 H C ++P+ IR+EVE LK DFN + +++ ++ + +Y + VP+ FV + D W + + +V+ ++ L P Y D+LH+ A HLG W++ + +NV + W++ M+PQG LVKH K +++A+G +N A P + H RF+ FF LR++N++ L ++ +Q L+ + +W++ IS+ ++F N ++ +K+LR+R +LG+ Y + ++N Sbjct: 264 HACCLSPDLIRKEVEYLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKSTQ-----------YVDKRWSCELFILVSVSTSVILMRHLLPPRYCDLLHKAAAHLGCWQKVDPSLCSNVLQHIWTEEYMWPQGVLVKHSKNVYKAMGHYNVAVPSDVSHYRFYFFFNKPLRILNILIILEGAMIFYQLYSLMCSEKWHQTISLALILFSNYYAFFKLLRDRIVLGKAYSYSASASN 487 HSP 2 Score: 50.0618 bits (118), Expect = 6.746e-6 Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 2 Query: 134 NPQVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSH--AKKALNFYLIDTHLVGYLIVM 370 +P +++ LKH IP + VLF L A + Y+++Y+TVWW P SH + +LNF+LID +++ + +++ Sbjct: 53 SPPLATQTVVPLKHCKIPELSMDKNVLFELHLFACHLIALFVHYVNIYKTVWWYPPSHPPSHTSLNFHLIDYNMLVFTVIV 133
BLAST of transmembrane protein 39A vs. Ensembl Zebrafish
Match: tmem39a (transmembrane protein 39A [Source:NCBI gene;Acc:323208]) HSP 1 Score: 98.2117 bits (243), Expect = 2.122e-22 Identity = 44/120 (36.67%), Postives = 76/120 (63.33%), Query Frame = 2 Query: 1355 RREEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 R E G +N P +TWS ++PQG LV+H + L++AVG +N A P + H RF+ F+ LRL+NV+ + ++++Q L+++ W +S+G ++ N + L+K+LR+R +LG+ Y Sbjct: 127 RLEPGSCSNTPQHTWSDSTIWPQGVLVRHSRCLYKAVGPYNVALPSDVSHARFYFLFHKPLRLLNVLIGIECSVVVYQLYSLLRSERWNHTLSLGLILVCNYYVLFKLLRDRLVLGKAYS 246
BLAST of transmembrane protein 39A vs. Ensembl Xenopus
Match: cltc (clathrin, heavy chain (Hc) [Source:Xenbase;Acc:XB-GENE-984047]) HSP 1 Score: 166.777 bits (421), Expect = 2.096e-44 Identity = 85/229 (37.12%), Postives = 141/229 (61.57%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFNR+ +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ S Q L P Y D+LHR A HLG+W++ E G +N P + WS+ ++PQG LV+H + L++AVG +N A P H RF+ F+ LRL+N++ + ++++Q L++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 260 SHSCPLSPDLIRNEVECLKADFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLSTQLLPPKYCDLLHRSASHLGKWQKLEHGSYSNAPQHIWSENTVWPQGVLVRHSRSLYKAVGPYNVAVPSEVSHARFYFLFHRPLRLLNLLLIIEGSLVLYQLYSLLRAEKWNHTLSIALILFCNYYVLFKLLRDRIVLGRAYS 477 HSP 2 Score: 63.1586 bits (152), Expect = 8.354e-10 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H HIP +P +LF F+ ++ L A +QY+++Y++VWW P +H +LNF+LID HL ++ VM Sbjct: 59 VRHCHIPELPLDGGLLFEFLFFIYLLVALFIQYINIYKSVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Xenopus
Match: cltc (clathrin, heavy chain (Hc) [Source:Xenbase;Acc:XB-GENE-984047]) HSP 1 Score: 166.392 bits (420), Expect = 2.997e-44 Identity = 85/229 (37.12%), Postives = 141/229 (61.57%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFNR+ +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ S Q L P Y D+LHR A HLG+W++ E G +N P + WS+ ++PQG LV+H + L++AVG +N A P H RF+ F+ LRL+N++ + ++++Q L++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 265 SHSCPLSPDLIRNEVECLKADFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLSTQLLPPKYCDLLHRSASHLGKWQKLEHGSYSNAPQHIWSENTVWPQGVLVRHSRSLYKAVGPYNVAVPSEVSHARFYFLFHRPLRLLNLLLIIEGSLVLYQLYSLLRAEKWNHTLSIALILFCNYYVLFKLLRDRIVLGRAYS 482
BLAST of transmembrane protein 39A vs. Ensembl Xenopus
Match: cltc (clathrin, heavy chain (Hc) [Source:Xenbase;Acc:XB-GENE-984047]) HSP 1 Score: 166.777 bits (421), Expect = 3.859e-44 Identity = 85/229 (37.12%), Postives = 141/229 (61.57%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFNR+ +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ S Q L P Y D+LHR A HLG+W++ E G +N P + WS+ ++PQG LV+H + L++AVG +N A P H RF+ F+ LRL+N++ + ++++Q L++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 293 SHSCPLSPDLIRNEVECLKADFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLSTQLLPPKYCDLLHRSASHLGKWQKLEHGSYSNAPQHIWSENTVWPQGVLVRHSRSLYKAVGPYNVAVPSEVSHARFYFLFHRPLRLLNLLLIIEGSLVLYQLYSLLRAEKWNHTLSIALILFCNYYVLFKLLRDRIVLGRAYS 510 HSP 2 Score: 62.7734 bits (151), Expect = 9.864e-10 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H HIP +P +LF F+ ++ L A +QY+++Y++VWW P +H +LNF+LID HL ++ VM Sbjct: 92 VRHCHIPELPLDGGLLFEFLFFIYLLVALFIQYINIYKSVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 161
BLAST of transmembrane protein 39A vs. Ensembl Xenopus
Match: tmem39b (transmembrane protein 39B [Source:NCBI gene;Acc:448588]) HSP 1 Score: 135.191 bits (339), Expect = 1.155e-33 Identity = 87/280 (31.07%), Postives = 150/280 (53.57%), Query Frame = 2 Query: 926 RNPSEIMNPSATQLALEQYGIFYYSKTVRH--------SAGYVQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIW-CGQHVFVTAVTAFLLYSVQHLTPA-YVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSN 1732 R P P+ LA G Y ++H + H C ++P+ IR EV LK DFN + R++ ++ + +Y + VP+ FV +YD W C + V+ T+ +L QHL PA Y D+LH+ A HLG W++ + +N+ ++W + M+PQG LVKH K +++AVG +N A P + H RF FF LR++N++ +L +++ +Q L+ + +W+ IS+ ++F N ++ +K+LR+R +LG+ Y ++ + Sbjct: 175 RRPGLSHMPNTRDLASMDRGSKDYLHVLQHILRHHMPSAEPLPTHACCLSPDLIRSEVHYLKLDFNWRVREVLLSSMLSAYYVAFVPVWFVKSTQ-----------YYDKRWSCELFLQVSLSTSVIL--TQHLLPARYCDLLHKAAAHLGCWQKVDPALCSNMLQHSWMEECMWPQGVLVKHNKNVYKAVGHYNVAIPSDVSHFRFHFFFSNPLRVLNILTTLEGVLIFYQLYSLLSSEKWHHTISLALILFSNYYAFFKLLRDRIVLGKAYSYTAVPD 441
BLAST of transmembrane protein 39A vs. Ensembl Xenopus
Match: tmem39b (transmembrane protein 39B [Source:NCBI gene;Acc:448588]) HSP 1 Score: 134.806 bits (338), Expect = 1.764e-33 Identity = 87/280 (31.07%), Postives = 150/280 (53.57%), Query Frame = 2 Query: 926 RNPSEIMNPSATQLALEQYGIFYYSKTVRH--------SAGYVQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIW-CGQHVFVTAVTAFLLYSVQHLTPA-YVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSN 1732 R P P+ LA G Y ++H + H C ++P+ IR EV LK DFN + R++ ++ + +Y + VP+ FV +YD W C + V+ T+ +L QHL PA Y D+LH+ A HLG W++ + +N+ ++W + M+PQG LVKH K +++AVG +N A P + H RF FF LR++N++ +L +++ +Q L+ + +W+ IS+ ++F N ++ +K+LR+R +LG+ Y ++ + Sbjct: 183 RRPGLSHMPNTRDLASMDRGSKDYLHVLQHILRHHMPSAEPLPTHACCLSPDLIRSEVHYLKLDFNWRVREVLLSSMLSAYYVAFVPVWFVKSTQ-----------YYDKRWSCELFLQVSLSTSVIL--TQHLLPARYCDLLHKAAAHLGCWQKVDPALCSNMLQHSWMEECMWPQGVLVKHNKNVYKAVGHYNVAIPSDVSHFRFHFFFSNPLRVLNILTTLEGVLIFYQLYSLLSSEKWHHTISLALILFSNYYAFFKLLRDRIVLGKAYSYTAVPD 449
BLAST of transmembrane protein 39A vs. Ensembl Mouse
Match: Tmem39a (transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]) HSP 1 Score: 169.088 bits (427), Expect = 2.042e-45 Identity = 80/228 (35.09%), Postives = 140/228 (61.40%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFN + +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + H RF+ F+ LR++N++ + ++ +Q L+++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 259 HSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRVLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYS 475 HSP 2 Score: 55.4546 bits (132), Expect = 1.548e-7 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P + F F+ ++ L +QY+++Y+TVWW P +H +LNF+LID +L ++ VM Sbjct: 59 VRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Mouse
Match: Tmem39a (transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]) HSP 1 Score: 169.088 bits (427), Expect = 2.042e-45 Identity = 80/228 (35.09%), Postives = 140/228 (61.40%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFN + +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + H RF+ F+ LR++N++ + ++ +Q L+++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 259 HSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRVLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYS 475 HSP 2 Score: 55.4546 bits (132), Expect = 1.548e-7 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P + F F+ ++ L +QY+++Y+TVWW P +H +LNF+LID +L ++ VM Sbjct: 59 VRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Mouse
Match: Tmem39a (transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]) HSP 1 Score: 166.007 bits (419), Expect = 7.703e-45 Identity = 79/231 (34.20%), Postives = 141/231 (61.04%), Query Frame = 2 Query: 1025 YVQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 ++ + C ++P+ IR EVE LKADFN + +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + H RF+ F+ LR++N++ + ++ +Q L+++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 188 FLGYPCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRVLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYS 407 HSP 2 Score: 55.4546 bits (132), Expect = 1.464e-7 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P + F F+ ++ L +QY+++Y+TVWW P +H +LNF+LID +L ++ VM Sbjct: 59 VRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Mouse
Match: Tmem39b (transmembrane protein 39b [Source:MGI Symbol;Acc:MGI:2682939]) HSP 1 Score: 127.102 bits (318), Expect = 9.157e-31 Identity = 81/229 (35.37%), Postives = 137/229 (59.83%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIW-CGQHVFVTAVTAFLLYSVQHLTPA-YVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCY 1711 H C ++P IR EVE LK DFN + +++ ++ + +Y + VP+ FV N +YD W C + V+ T+ +L +QHL PA Y D+LH+ A HLG W++ + +NV + W++ M+PQG LVKH K +++AVG +N A P + H RF FF LR++N++ L ++++Q L+ + +W++ IS+ ++F N ++ +K+LR+R +LG+ Y Sbjct: 262 HACCLSPSLIRNEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVK-----------NTHYYDKRWSCELFLLVSISTSVIL--MQHLLPASYCDLLHKAAAHLGCWQKVDPALCSNVLQHPWTEECMWPQGVLVKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSNPLRILNILLLLEGAVIVYQLYSLMSSEKWHQTISLALILFSNYYAFFKLLRDRLVLGKAY 477 HSP 2 Score: 50.447 bits (119), Expect = 4.809e-6 Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 2 Query: 134 NPQVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSH--AKKALNFYLIDTHLV 352 +P +++ L+H IP +P +LF L A + Y+++Y+TVWW P SH + +LNF+LID +L+ Sbjct: 53 SPPLAAQTVVPLQHCKIPELPVQASILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLL 127
BLAST of transmembrane protein 39A vs. Ensembl Mouse
Match: Tmem39a (transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]) HSP 1 Score: 92.0485 bits (227), Expect = 1.678e-21 Identity = 49/165 (29.70%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 1220 HYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCY 1711 +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 8 YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSD---------------------------------------KWNHTLSMALILFCNYYVLFKLLRDRIVLGRAY 133
BLAST of transmembrane protein 39A vs. UniProt/SwissProt
Match: sp|Q6PH58|TM39A_DANRE (Transmembrane protein 39A OS=Danio rerio OX=7955 GN=tmem39a PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.570e-47 Identity = 84/226 (37.17%), Postives = 136/226 (60.18%), Query Frame = 2 Query: 1040 CTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 C +PE IR EV+ LK DFNR+ +++ F +L + +Y + +PL FV +YD W +H+ + + AF++ L P Y D+LHRCA HLGRW+R E G +N P +TWS ++PQG LV+H + L++AVG +N A P + H RF+ F+ LRL+NV+ + ++++Q L+++ W +S+G ++ N + L+K+LR+R +LG+ Y Sbjct: 254 CPPSPELIRSEVQQLKTDFNRRIKEVLFNSLLSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLMSHLLPPHYCDLLHRCAAHLGRWQRLEPGSCSNTPQHTWSDSTIWPQGVLVRHSRCLYKAVGPYNVALPSDVSHARFYFLFHKPLRLLNVLIGIECSVVVYQLYSLLRSERWNHTLSLGLILVCNYYVLFKLLRDRLVLGKAYS 468
BLAST of transmembrane protein 39A vs. UniProt/SwissProt
Match: sp|Q5U2V9|TM39A_RAT (Transmembrane protein 39A OS=Rattus norvegicus OX=10116 GN=Tmem39a PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 7.992e-47 Identity = 83/235 (35.32%), Postives = 144/235 (61.28%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNN 1735 H+C ++P+ IR EVE LKADFN + +D+ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + H RF+ F+ LR++N++ + ++I+Q L+++ +W +S+ ++F N + L+K+LR+R +LGR Y S + + Sbjct: 259 HSCPLSPDLIRNEVECLKADFNHRIKDVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDGSHARFYFLFHRPLRVLNLLILIEGSVIIYQLYSLLRSEKWNHTLSMALVLFCNYYVLFKLLRDRIVLGRAYSYPSTATD 482 HSP 2 Score: 55.4546 bits (132), Expect = 1.054e-6 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P + F F+ ++ L +QY+++Y+TVWW P +H +LNF+LID +L ++ VM Sbjct: 59 VRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVM 128
BLAST of transmembrane protein 39A vs. UniProt/SwissProt
Match: sp|Q9CYC3|TM39A_MOUSE (Transmembrane protein 39A OS=Mus musculus OX=10090 GN=Tmem39a PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.428e-44 Identity = 80/228 (35.09%), Postives = 140/228 (61.40%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFN + +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ + Q L Y D+LH+ A HLG+W++ E G +N P + WS+ ++PQG LV+H + L+RA+G +N A P + H RF+ F+ LR++N++ + ++ +Q L+++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 259 HSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRVLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYS 475 HSP 2 Score: 55.4546 bits (132), Expect = 1.083e-6 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H IP +P + F F+ ++ L +QY+++Y+TVWW P +H +LNF+LID +L ++ VM Sbjct: 59 VRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVM 128
BLAST of transmembrane protein 39A vs. UniProt/SwissProt
Match: sp|Q6GL42|TM39A_XENTR (Transmembrane protein 39A OS=Xenopus tropicalis OX=8364 GN=tmem39a PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.304e-43 Identity = 85/229 (37.12%), Postives = 141/229 (61.57%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LKADFNR+ +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ S Q L P Y D+LHR A HLG+W++ E G +N P + WS+ ++PQG LV+H + L++AVG +N A P H RF+ F+ LRL+N++ + ++++Q L++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 260 SHSCPLSPDLIRNEVECLKADFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLSTQLLPPKYCDLLHRSASHLGKWQKLEHGSYSNAPQHIWSENTVWPQGVLVRHSRSLYKAVGPYNVAVPSEVSHARFYFLFHRPLRLLNLLLIIEGSLVLYQLYSLLRAEKWNHTLSIALILFCNYYVLFKLLRDRIVLGRAYS 477 HSP 2 Score: 62.7734 bits (151), Expect = 4.827e-9 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H HIP +P +LF F+ ++ L A +QY+++Y++VWW P +H +LNF+LID HL ++ VM Sbjct: 59 VRHCHIPELPLDGGLLFEFLFFIYLLVALFIQYINIYKSVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. UniProt/SwissProt
Match: sp|Q6GNY8|T39AB_XENLA (Transmembrane protein 39A-B OS=Xenopus laevis OX=8355 GN=tmem39a-b PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.205e-43 Identity = 84/229 (36.68%), Postives = 141/229 (61.57%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H+C ++P+ IR EVE LK+DFNR+ +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ S Q L P Y D+LHR A HLG+W++ E G +N P + WS+ ++PQG LV+H + L++AVG +N A P H RF+ F+ LRL+N++ + ++++Q L++ +W +S+ ++F N + L+K+LR+R +LGR Y Sbjct: 260 SHSCPLSPDLIRNEVECLKSDFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLSTQLLPPKYCDLLHRSASHLGKWQKLEHGSYSNAPQHVWSENTVWPQGVLVRHSRSLYKAVGSYNVAVPSEISHARFYFLFHRPLRLLNLLLVIEGSLVLYQLYSLLRAEKWNHTLSIALILFCNYYVLFKLLRDRIVLGRAYS 477 HSP 2 Score: 61.2326 bits (147), Expect = 1.710e-8 Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKK--ALNFYLIDTHLVGYLIVM 370 ++H HIP +P ++F F+ ++ L QY+++Y+TVWW P +H +LNF+LID HL ++ VM Sbjct: 59 VRHCHIPELPVDGGLVFEFLFFIYLLVTLFTQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVM 128
BLAST of transmembrane protein 39A vs. TrEMBL
Match: A0A267EWE2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014753g1 PE=4 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 5.354e-72 Identity = 117/230 (50.87%), Postives = 159/230 (69.13%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGR-SANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKE 1717 +H+C+ +PE+IR+E E LK+DFN + + I F TLF+ F+++ VPLLFV N I+ + +CG HV VT +AFL Y+ HL P +D LHRCALHLG W R EGR SA VPY WS+LQ++ QG LVKHVKGLF+A GI NSAEPGN+MH+RF FY +RL + + + ++L+ Q+A+L+Q +EWYK++S MM FN+ SLYK+ RNR + RCY + Sbjct: 226 RHSCSRDPEKIRDETEALKSDFNGRLKIILFSTLFSSFHSAFVPLLFVQIQTAYCETDCWNTIYLEPWFCGVHVAVTVASAFLFYTQHHLPPHRIDTLHRCALHLGCWVRVEGRGSAQVPYIPWSELQVWQQGALVKHVKGLFKAEGITNSAEPGNSMHSRFHSLFYSPMRLADGLQCAIALLLVLQFAVLLQCHEWYKVLSSAIMMLFNLVSLYKLTRNRLVFKRCYAD 455 HSP 2 Score: 100.138 bits (248), Expect = 1.664e-18 Identity = 77/222 (34.68%), Postives = 116/222 (52.25%), Query Frame = 2 Query: 68 MPQLSRKIGAKIPIQ--KHNDDKVNPQVSSDAHTLL---KHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYXXXXXXXXXXXXXXXXXGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIRAKVWLKLFLKSILSVESNKDDAN--VPTSNTASN 712 MP + R I ++I +D+ + S+ + TLL KHA IP IP + + F L FS + +QY+HLY+T WWLP SH + A+NF LID LVGYL+ M LP L + ++Q+ I + + + C L W F + S+ VY +T Y ++L YP I YAL++Y +P L R WL S + + A+ + +S +A+N Sbjct: 1 MPAIKRNI-SRISHSYVAGDDNSPHSNQSASSATLLVQPKHARIPHIPADSELSFSVFMLFFSFSCMSLQYIHLYKTTWWLPNSHHQYAINFRLIDYKLVGYLVSMLCLPLLLTLFRQLRNIPNRCCFTACLALLCA-LSCCWAALFCWMSYFVYCRTSLLYCILLVYPCITYALVFYGHVPGTLLSRN--WLSGGGGSTPQHQKSSATASGAISSSESAAN 218
BLAST of transmembrane protein 39A vs. TrEMBL
Match: A0A267EXM3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig000452g2 PE=4 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 2.434e-71 Identity = 116/230 (50.43%), Postives = 159/230 (69.13%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGR-SANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKE 1717 +H+C+ +PE+IR+E E LK+DFN + + I F TLF+ F+++ VPLLFV N I+ + +CG HV VT +AFL Y+ HL P +D LHRCALHLG W + EGR SA VPY WS+LQ++ QG LVKHVKGLF+A GI NSAEPGN+MH+RF FY +RL + + + ++L+ Q+A+L+Q +EWYK++S MM FN+ SLYK+ RNR + RCY + Sbjct: 232 RHSCSRDPEKIRDETEALKSDFNGRLKIILFSTLFSSFHSAFVPLLFVQIQSAYCETDCWNTIYLEPWFCGVHVAVTVASAFLFYTQHHLPPHRIDTLHRCALHLGCWVKVEGRGSAQVPYIPWSELQVWQQGALVKHVKGLFKAEGITNSAEPGNSMHSRFHSLFYSPMRLADGLQCAIALLLVLQFAVLLQCHEWYKVLSSAIMMLFNLVSLYKLTRNRLVFKRCYAD 461 HSP 2 Score: 98.9821 bits (245), Expect = 4.002e-18 Identity = 70/188 (37.23%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 68 MPQLSRKIGAKIPIQ--KHNDDKVNPQVSSDAHTLL---KHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYXXXXXXXXXXXXXXXXXGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIR 616 MP + R I ++I +D+ + S+ + TLL KHA IP IP + + F L FS + +QY+HLY+T WWLP SH + A+NF LID LVGYL+ M LP L + ++Q+ I + + + C L W F + S+ VY +T Y ++L YP I YAL++Y +P L R Sbjct: 1 MPAIKRNI-SRISHSYVAGDDNSPHSNQSASSATLLVQPKHARIPHIPADSELPFSVFMLFFSFSCMSLQYIHLYKTTWWLPNSHHQYAINFRLIDYKLVGYLVSMLCLPLLLTLFRQLKSIPNRCCFTACLALLCA-LSCCWAALFCWMSYFVYCRTSLLYCILLVYPCITYALVFYGHVPGTLLSR 186
BLAST of transmembrane protein 39A vs. TrEMBL
Match: A0A1I8GGU1 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.801e-71 Identity = 117/230 (50.87%), Postives = 159/230 (69.13%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGR-SANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKE 1717 +H+C+ +PE+IR+E E LK+DFN + + I F TLF+ F+++ VPLLFV N I+ + +CG HV VT +AFL Y+ HL P +D LHRCALHLG W R EGR SA VPY WS+LQ++ QG LVKHVKGLF+A GI NSAEPGN+MH+RF FY +RL + + + ++L+ Q+A+L+Q +EWYK++S MM FN+ SLYK+ RNR + RCY + Sbjct: 196 RHSCSRDPEKIRDETEALKSDFNGRLKIILFSTLFSSFHSAFVPLLFVQ-----------NTIYLEPWFCGVHVAVTVASAFLFYTQHHLPPHRIDTLHRCALHLGCWVRVEGRGSAQVPYIPWSELQVWQQGALVKHVKGLFKAEGITNSAEPGNSMHSRFHSLFYSPMRLADGLQCAIALLLVLQFAVLLQCHEWYKVLSSAIMMLFNLVSLYKLTRNRLVFKRCYAD 414 HSP 2 Score: 77.7962 bits (190), Expect = 1.914e-11 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 68 MPQLSRKIGAKIPIQ--KHNDDKVNPQVSSDAHTLL---KHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVM 370 MP + R I ++I +D+ + S+ + TLL KHA IP IP + + F L FS + +QY+HLY+T WWLP SH + A+NF LID LVGYL+ M Sbjct: 1 MPAIKRNI-SRISHSYVAGDDNSPHSNQSASSATLLVQPKHARIPHIPADSELSFSVFMLFFSFSCMSLQYIHLYKTTWWLPNSHHQYAINFRLIDYKLVGYLVSM 105
BLAST of transmembrane protein 39A vs. TrEMBL
Match: A0A1I8GZP4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 9.948e-70 Identity = 116/230 (50.43%), Postives = 159/230 (69.13%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGR-SANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKE 1717 +H+C+ +PE+IR+E E LK+DFN + + I F TLF+ F+++ VPLLFV N I+ + +CG HV VT +AFL Y+ HL P +D LHRCALHLG W + EGR SA VPY WS+LQ++ QG LVKHVKGLF+A GI NSAEPGN+MH+RF FY +RL + + + ++L+ Q+A+L+Q +EWYK++S MM FN+ SLYK+ RNR + RCY + Sbjct: 232 RHSCSRDPEKIRDETEALKSDFNGRLKIILFSTLFSSFHSAFVPLLFVQ-----------NTIYLEPWFCGVHVAVTVASAFLFYTQHHLPPHRIDTLHRCALHLGCWVKVEGRGSAQVPYIPWSELQVWQQGALVKHVKGLFKAEGITNSAEPGNSMHSRFHSLFYSPMRLADGLQCAIALLLVLQFAVLLQCHEWYKVLSSAIMMLFNLVSLYKLTRNRLVFKRCYAD 450 HSP 2 Score: 98.5969 bits (244), Expect = 4.795e-18 Identity = 70/188 (37.23%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 68 MPQLSRKIGAKIPIQ--KHNDDKVNPQVSSDAHTLL---KHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYXXXXXXXXXXXXXXXXXGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIR 616 MP + R I ++I +D+ + S+ + TLL KHA IP IP + + F L FS + +QY+HLY+T WWLP SH + A+NF LID LVGYL+ M LP L + ++Q+ I + + + C L W F + S+ VY +T Y ++L YP I YAL++Y +P L R Sbjct: 1 MPAIKRNI-SRISHSYVAGDDNSPHSNQSASSATLLVQPKHARIPHIPADSELPFSVFMLFFSFSCMSLQYIHLYKTTWWLPNSHHQYAINFRLIDYKLVGYLVSMLCLPLLLTLFRQLKSIPNRCCFTACLALLCA-LSCCWAALFCWMSYFVYCRTSLLYCILLVYPCITYALVFYGHVPGTLLSR 186
BLAST of transmembrane protein 39A vs. TrEMBL
Match: A0A1I8J7M4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig028443g1 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.208e-69 Identity = 116/230 (50.43%), Postives = 159/230 (69.13%), Query Frame = 2 Query: 1031 QHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGR-SANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKE 1717 +H+C+ +PE+IR+E E LK+DFN + + I F TLF+ F+++ VPLLFV N I+ + +CG HV VT +AFL Y+ HL P +D LHRCALHLG W + EGR SA VPY WS+LQ++ QG LVKHVKGLF+A GI NSAEPGN+MH+RF FY +RL + + + ++L+ Q+A+L+Q +EWYK++S MM FN+ SLYK+ RNR + RCY + Sbjct: 231 RHSCSRDPEKIRDETEALKSDFNGRLKIILFSTLFSSFHSAFVPLLFVQ-----------NTIYLEPWFCGVHVAVTVASAFLFYTQHHLPPHRIDTLHRCALHLGCWVKVEGRGSAQVPYIPWSELQVWQQGALVKHVKGLFKAEGITNSAEPGNSMHSRFHSLFYSPMRLADGLQCAIALLLVLQFAVLLQCHEWYKVLSSAIMMLFNLVSLYKLTRNRLVFKRCYAD 449 HSP 2 Score: 98.5969 bits (244), Expect = 4.507e-18 Identity = 70/188 (37.23%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 68 MPQLSRKIGAKIPIQ--KHNDDKVNPQVSSDAHTLL---KHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYXXXXXXXXXXXXXXXXXGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIR 616 MP + R I ++I +D+ + S+ + TLL KHA IP IP + + F L FS + +QY+HLY+T WWLP SH + A+NF LID LVGYL+ M LP L + ++Q+ I + + + C L W F + S+ VY +T Y ++L YP I YAL++Y +P L R Sbjct: 1 MPAIKRNI-SRISHSYVAGDDNSPHSNQSASSATLLVQPKHARIPHIPADSELSFSVFMLFFSFSCMSLQYIHLYKTTWWLPNSHHQYAINFRLIDYKLVGYLVSMLCLPLLLTLFRQLRNIPNRCCFTACLALLCA-LSCCWAALFCWMSYFVYCRTSLLYCILLVYPCITYALVFYGHVPGTLLSR 186
BLAST of transmembrane protein 39A vs. Ensembl Cavefish
Match: tmem39a (transmembrane protein 39A [Source:NCBI gene;Acc:103041799]) HSP 1 Score: 181.8 bits (460), Expect = 3.660e-50 Identity = 86/228 (37.72%), Postives = 142/228 (62.28%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYK 1714 H C +PE IR EVE LK+DFNR+ +++ F +LF+ +Y + +PL FV N +YD W +H+ + + AF++ Q L P+Y D+LHR A HLGRW+R E G +N P + WS+ ++PQG LV+H + L++AVG +N A P + H RF+ F+ LR++N++ + ++++Q L+++ W +S+G ++F N + L+K+LR+R +LG+ Y Sbjct: 254 HTCPPSPELIRSEVEELKSDFNRRIKEVLFNSLFSAYYVAFLPLCFV-----------QNTQYYDMRWSCEHLIMVWINAFVMLMSQLLPPSYCDLLHRSAAHLGRWQRLEHGSYSNAPQHVWSESTIWPQGVLVRHSRCLYKAVGPYNVALPSDVSHARFYFLFHKPLRILNLLIGIESSVVLYQLYSLLRSERWNHTLSLGLILFCNYYVLFKLLRDRIVLGKAYS 470 HSP 2 Score: 54.6842 bits (130), Expect = 2.091e-7 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSH--AKKALNFYLIDTHLVGYLIVM 370 ++H+ IP +P + +LF F+ ++ L A +QY+++YRTVWW P SH A +LNFYLID HL ++ VM Sbjct: 59 VRHSRIPELPLDSSLLFEFLLFLYLLVALFVQYINIYRTVWWYPHSHPAASTSLNFYLIDYHLAIFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Cavefish
Match: tmem39b (transmembrane protein 39B [Source:NCBI gene;Acc:103038030]) HSP 1 Score: 135.576 bits (340), Expect = 9.501e-34 Identity = 75/237 (31.65%), Postives = 137/237 (57.81%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNNIV 1741 H C ++P+ IR+EVE LK DFN + +++ ++ + +Y + VP+ FV + D W + + +V+ ++ L P Y D+LH+ A HLG W++ + +NV + W++ M+PQG LVKH K +++A+G +N A P + H RF+ FF LR++N++ L ++ +Q L+ + +WY+ IS+ ++F N ++ +K+LR+R +LG+ Y + S++ V Sbjct: 266 HACCLSPDLIRKEVEYLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKSTQ-----------YVDKRWSCELFILVSVSTSIILMRHLLPPRYCDLLHKAAAHLGCWQKVDPSLCSNVVQHLWTEEYMWPQGVLVKHNKNVYKAMGHYNVAVPSDVSHYRFYFFFNKPLRILNILIILEGAMIFYQLYSLMCSEKWYQTISLALILFSNYYAFFKLLRDRIVLGKAYSYSASSDHKV 491
BLAST of transmembrane protein 39A vs. Ensembl Nematostella
Match: EDO41973 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2S0]) HSP 1 Score: 160.614 bits (405), Expect = 6.559e-43 Identity = 82/230 (35.65%), Postives = 134/230 (58.26%), Query Frame = 2 Query: 1037 NCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLL-GRCYKEES 1723 NCT+ P+ +R E E L+ DFN + + + F +L ++ +P+ F + + ++YD W Q + +++ L+ + L Y D LH+CA+HLG W R P+ WS L ++PQG LV+H K L++ +GIHN A PG+ H+RFF F LRLIN M + +L ++++Q ++I+ + WY+L+SV M+ FN LY+ILR+R+ L G ++E+ Sbjct: 258 NCTLPPDAVRYEAECLRTDFNSRIKQVLFQSLLCAYFVGFLPMRFSEQ----------HHVYYDLWWACQQILFIWLSSLLVLMMYMLPLTYCDALHKCAVHLGGWERYTCGHRETPH-VWSPLTVWPQGVLVRHNKLLYKGLGIHNVAIPGDPHHSRFFFMFESPLRLINWMSASLLALVLYQLVLIIRCHFWYQLLSVVGMLSFNYVILYRILRDRWALQGVLAQKET 476
BLAST of transmembrane protein 39A vs. Ensembl Medaka
Match: tmem39a (transmembrane protein 39A [Source:NCBI gene;Acc:101158181]) HSP 1 Score: 174.481 bits (441), Expect = 2.312e-47 Identity = 86/240 (35.83%), Postives = 145/240 (60.42%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNNIVYNS 1750 H + PE IR EVE LK+DFNR+ +++ F +LF+ +Y + +PL FV +YD W +H+ + + AF++ Q L P+Y D+LHR A HLGRW++ E G +N P + WS+ ++PQG LV+H + L++AVG +N A P + H RF+ F+ LR++N++ + ++++Q L+++ W +S+G ++F N + L+K+LR+R +LG+ Y SN++ S Sbjct: 266 HTHSDTPELIRAEVEELKSDFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQ-----------YYDMRWSCEHLIMVWINAFVMLMSQLLPPSYCDLLHRSAAHLGRWQKLEHGSYSNAPQHVWSESTVWPQGVLVRHSRCLYKAVGPYNVALPSDVSHARFYFLFHKPLRILNLLIWIESSVVLYQLYSLLRSERWNHTLSLGLILFCNYYVLFKLLRDRIVLGKAYAYPLPSNSLGLKS 494 HSP 2 Score: 50.447 bits (119), Expect = 4.108e-6 Identity = 30/70 (42.86%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 167 LKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSH--AKKALNFYLIDTHLVGYLIVM 370 ++H+ IP +P + +LF F+ ++ L A +QY+++YRTVWW P SH A +LNF+L+D HL ++ VM Sbjct: 59 VRHSRIPELPLDSSLLFEFLLFLYLLVALFVQYINIYRTVWWYPYSHPAASTSLNFHLMDYHLAIFITVM 128
BLAST of transmembrane protein 39A vs. Ensembl Medaka
Match: tmem39b (transmembrane protein 39B [Source:NCBI gene;Acc:101175280]) HSP 1 Score: 136.732 bits (343), Expect = 3.960e-34 Identity = 75/227 (33.04%), Postives = 133/227 (58.59%), Query Frame = 2 Query: 1034 HNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRR-EEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCY 1711 H+C ++P+ IR+EVE LK DFN + +++ ++ + +Y + VP+ FV + D W + + +V+ ++ L P Y D+LH+ A HLG W++ + +NV + WS+ M+PQG LVKH K +F+A+G +N A P + H RF+ FF LR++N++ L ++ +Q LI + +W++ IS+ ++F N ++ +K+LR+R +LG+ Y Sbjct: 261 HSCCISPDLIRKEVEYLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKSTQ-----------YVDKRWSCELFILVSVSTSVILMRHLLPPQYCDLLHKAAAHLGCWQKVDPASCSNVLQHIWSEEYMWPQGVLVKHNKNVFKAMGHYNVAVPSDVSHYRFYFFFNKPLRILNILIILEGAMIFYQLYSLICSEKWHQTISLALILFSNYYAFFKLLRDRIVLGKAY 476
BLAST of transmembrane protein 39A vs. Planmine SMEST
Match: SMESG000015868.1 (SMESG000015868.1) HSP 1 Score: 1052.74 bits (2721), Expect = 0.000e+0 Identity = 580/583 (99.49%), Postives = 580/583 (99.49%), Query Frame = 2 Query: 68 MPQLSRKIGAKIPIQKHNDDKVNPQVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYXXXXXXXXXXXXXXXXXGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIRAKVWLKLFLKSILSVESNKDDANVPTSNTASNTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKSAYSKQNFNPSFDSNPRNPSEIMNPSATQLALEQYGIFYYSKTVRHSAGYVQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGRSANVPYNTWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNNIVYNSSISPGNGPPLVNTNNPYHMHFD 1816 MPQLSRKIGAKIPIQKHNDDKVNPQVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYKQIFQIQIKKVWVIIIFGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIRAKVWLKLFLKSILSVESNKDDANVPTSNTASNTALASGHNIAINNASNNQISG SDSPVHKSSVSSNETNSSTSAVT TTTNSTFEKSAYSKQNFNPSFDSNPRNPSEIMNPSATQLALEQYGIFYYSKTVRHSAGYVQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGRSANVPYN WSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNNIVYNSSISPGNGPPLVNTNNPYHMHFD Sbjct: 1 MPQLSRKIGAKIPIQKHNDDKVNPQVSSDAHTLLKHAHIPAIPNCNMVLFHFIALVFSLTATVMQYLHLYRTVWWLPQSHAKKALNFYLIDTHLVGYLIVMEVLPFLYSYYKQIFQIQIKKVWVIIIFGSCVCLWIIWIVAFLFFSFCVYMKTPGFYLLILFYPPIAYALIYYHFIPYNLYIRAKVWLKLFLKSILSVESNKDDANVPTSNTASNTALASGHNIAINNASNNQISGGSDSPVHKSSVSSNETNSSTSAVTATTTNSTFEKSAYSKQNFNPSFDSNPRNPSEIMNPSATQLALEQYGIFYYSKTVRHSAGYVQHNCTMNPEEIREEVELLKADFNRKFRDIFFGTLFTFFYASLVPLLFVPKADISGNVTVVNAIHYDGIWCGQHVFVTAVTAFLLYSVQHLTPAYVDVLHRCALHLGRWRREEGRSANVPYNAWSQLQMFPQGTLVKHVKGLFRAVGIHNSAEPGNNMHNRFFCFFYPSLRLINVMCSLVLMILIFQYAILIQNYEWYKLISVGSMMFFNVFSLYKILRNRFLLGRCYKEESLSNNIVYNSSISPGNGPPLVNTNNPYHMHFD 583 The following BLAST results are available for this feature:
BLAST of transmembrane protein 39A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of transmembrane protein 39A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of transmembrane protein 39A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of transmembrane protein 39A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of transmembrane protein 39A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of transmembrane protein 39A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of transmembrane protein 39A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of transmembrane protein 39A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of transmembrane protein 39A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of transmembrane protein 39A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of transmembrane protein 39A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of transmembrane protein 39A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of transmembrane protein 39A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of transmembrane protein 39A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30009594 ID=SMED30009594|Name=transmembrane protein 39A|organism=Schmidtea mediterranea sexual|type=transcript|length=1865bpback to top protein sequence of SMED30009594-orf-1 >SMED30009594-orf-1 ID=SMED30009594-orf-1|Name=SMED30009594-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=584bp MPQLSRKIGAKIPIQKHNDDKVNPQVSSDAHTLLKHAHIPAIPNCNMVLFback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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