Cysteine and histidine-rich protein 1

Overview
NameCysteine and histidine-rich protein 1
Smed IDSMED30009538
Length (bp)1189
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30009538

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
reproductive organSMED30009538SMESG000001532.1 Contig51422newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30009538SMESG000001532.1 Contig51422uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
testisSMED30009538SMESG000042600.1 Contig3922GPL15192PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30009538SMESG000001532.1 PL06004B1E04ncbi_smed_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30009538SMESG000001532.1 Contig3922GPL15192PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testis primordiumSMED30009538SMESG000001532.1 Contig3922_SE3GPL10652PMID:20844018
Wang et al., 2010		whole organism juvenile cDNA to DNA expression microarray evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Human
Match: CYHR1 (cysteine and histidine rich 1 [Source:HGNC Symbol;Acc:HGNC:17806])

HSP 1 Score: 82.4185 bits (202), Expect = 1.172e-16
Identity = 64/221 (28.96%), Postives = 99/221 (44.80%), Query Frame = 2 
Query:  212 IKNIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN 832
            + +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N
Sbjct:  105 LYSVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERN 316
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Human
Match: CYHR1 (cysteine and histidine rich 1 [Source:HGNC Symbol;Acc:HGNC:17806])

HSP 1 Score: 79.337 bits (194), Expect = 2.521e-16
Identity = 62/208 (29.81%), Postives = 92/208 (44.23%), Query Frame = 2 
Query:  248 SLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN 832
            + +   EC+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N
Sbjct:   25 AAVSTAECTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERN 223
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Human
Match: CYHR1 (cysteine and histidine rich 1 [Source:HGNC Symbol;Acc:HGNC:17806])

HSP 1 Score: 78.9518 bits (193), Expect = 1.420e-15
Identity = 61/201 (30.35%), Postives = 89/201 (44.28%), Query Frame = 2 
Query:  269 CSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN 832
            C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N
Sbjct:   83 CTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGSELMEILDGMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERN 274
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Fly
Match: CG32486 (gene:FBgn0266918 transcript:FBtr0073004)

HSP 1 Score: 73.1738 bits (178), Expect = 7.366e-14
Identity = 42/127 (33.07%), Postives = 56/127 (44.09%), Query Frame = 2 
Query:  212 IKNIVACSACF-LSLIPMKECSNGHLICQSCYLILRQFER-----PQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQC 571
            I N + C+ C  L    M +C  GHL+C +C+  L    R       CP CR+ +  S   + L  EK  SELP  C  C      K L  H+  +C +R   C Y  +GC W G   E+  H   C
Sbjct:  107 ISNALCCAVCLDLPKTAMYQCQMGHLMCAACFTHLLADGRLRDQIATCPNCRVEISKSTASRNLAVEKAASELPSECQFCNKEFPYKSLERHEQHECQERPTKCKYHRIGCQWRGPYHETNEHERNC 233
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Fly
Match: sinah (gene:FBgn0259794 transcript:FBtr0301683)

HSP 1 Score: 51.6026 bits (122), Expect = 6.408e-7
Identity = 36/118 (30.51%), Postives = 54/118 (45.76%), Query Frame = 2 
Query:  221 IVACSACFLSLIP-MKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIH----CGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSH 559
            ++ C  CF  ++P + +C  GHLIC +C   L       CPVCR+ + +   + L  EK+ S+L   C H    C   L   +   H+  DC  R   C Y    C+W G   + + H
Sbjct:  103 LLECPVCFGYIMPPIMQCPRGHLICSTCRSKLT-----ICPVCRVFMTN--IRSLAMEKVASKLIFPCKHSHFGCRARLSYAEKTKHE-EDCECRPYFCPYPDDKCSWQGPLRDVYQH 212
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Zebrafish
Match: cyhr1 (cysteine/histidine-rich 1 [Source:NCBI gene;Acc:767773])

HSP 1 Score: 84.3445 bits (207), Expect = 1.566e-17
Identity = 73/280 (26.07%), Postives = 125/280 (44.64%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSIS--EIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C +C     R  L+ HQ  +C  R   C Y  +GC W G   E  +H  +C     T +    I D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    +D   + ++P +    F+     TE+
Sbjct:   85 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECSYCLKQFPRSGLDRHQTEECQDRVTQCKYKRIGCPWQGPFHELSAHEAECCHPSKTGMELMGILDEMDQSHRRELQLYNSIFSLLCFEKIGFTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLAFQLILKSKV-NSALECSFLLLKGPYED---IKIKPVIQHHVFSNDANETEY 351
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Xenopus
Match: cntn2 (contactin 2 [Source:Xenbase;Acc:XB-GENE-6070188])

HSP 1 Score: 79.337 bits (194), Expect = 5.474e-16
Identity = 73/262 (27.86%), Postives = 112/262 (42.75%), Query Frame = 2 
Query:  269 CSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQC--KVSKDTSISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  H+  +C  R   C Y  +GC W G   E   H  +C         + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   INDSE N        + ++   ++ V NS     F+L+    DD   V + P +    FT     TE+
Sbjct:   30 CTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLKQFPRSLLERHKKDECQDRVTQCKYKRIGCPWQGPFHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---INDSERNPNLSCKRTLSFQLILKSKV-NSPMECSFLLLKGPYDD---VKIHPVIYHFVFTNENNETEY 278
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Mouse
Match: Cyhr1 (cysteine and histidine rich 1 [Source:MGI Symbol;Acc:MGI:1859320])

HSP 1 Score: 79.7221 bits (195), Expect = 3.748e-16
Identity = 62/220 (28.18%), Postives = 96/220 (43.64%), Query Frame = 2 
Query:  212 IKNIVACSACFLSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN 832
            + ++V       + +   +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N
Sbjct:   13 LSHLVLAGVSLHAAVSSVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERN 223
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Mouse
Match: Cyhr1 (cysteine and histidine rich 1 [Source:MGI Symbol;Acc:MGI:1859320])

HSP 1 Score: 71.633 bits (174), Expect = 1.282e-13
Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL 670
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L
Sbjct:  102 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLL 261
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Mouse
Match: Cyhr1 (cysteine and histidine rich 1 [Source:MGI Symbol;Acc:MGI:1859320])

HSP 1 Score: 71.2478 bits (173), Expect = 4.423e-13
Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL 670
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L
Sbjct:  102 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLL 261
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. UniProt/SwissProt
Match: sp|Q08CH8|CYHR1_DANRE (Cysteine and histidine-rich protein 1 OS=Danio rerio OX=7955 GN=cyhr1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.185e-16
Identity = 73/280 (26.07%), Postives = 125/280 (44.64%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSIS--EIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C +C     R  L+ HQ  +C  R   C Y  +GC W G   E  +H  +C     T +    I D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    +D   + ++P +    F+     TE+
Sbjct:   78 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECSYCLKQFPRSGLDRHQTEECQDRVTQCKYKRIGCPWQGPFHELSAHEAECCHPSKTGMELMGILDEMDQSHRRELQLYNSIFSLLCFEKIGFTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLAFQLILKSKV-NSALECSFLLLKGPYED---IKIKPVIQHHVFSNDANETEY 344
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. UniProt/SwissProt
Match: sp|Q2TAD9|CYR1B_XENLA (Cysteine and histidine-rich protein 1-B OS=Xenopus laevis OX=8355 GN=cyhr1-b PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 5.130e-16
Identity = 75/280 (26.79%), Postives = 121/280 (43.21%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQC--KVSKDTSISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  H+  +C  R   C Y  +GC W G   E   H  +C         + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    DD   V + P +    FT     TE+
Sbjct:   68 SVLCCAVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAISELPSDCGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIGCPWQGPYHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLSFQLILKSKV-NSPMECSFLLLKGPYDD---VKIHPVIYQFVFTNENNETEY 334
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. UniProt/SwissProt
Match: sp|Q6GNX1|CYR1A_XENLA (Cysteine and histidine-rich protein 1-A OS=Xenopus laevis OX=8355 GN=cyhr1-a PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 5.178e-16
Identity = 74/280 (26.43%), Postives = 121/280 (43.21%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQC--KVSKDTSISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  H+  +C  R   C Y  +GC W G   E   H  +C         + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ + NS     F+L+    DD   V + P +    FT     TE+
Sbjct:   68 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSDCGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIGCPWEGPYHELTVHESECCHPTKTGNELMEILDEMDQTHKKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLSFQLILKSKI-NSPMECSFLLLKGPYDD---VKIHPVIYHFVFTNENNETEY 334
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. UniProt/SwissProt
Match: sp|Q7YR89|CYHR1_BOVIN (Cysteine and histidine-rich protein 1 OS=Bos taurus OX=9913 GN=CYHR1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.745e-15
Identity = 61/202 (30.20%), Postives = 90/202 (44.55%), Query Frame = 2 
Query:  266 ECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN 832
            +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N
Sbjct:   31 QCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLCQFPRSILERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERN 223
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. UniProt/SwissProt
Match: sp|Q5BK76|CYHR1_RAT (Cysteine and histidine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Cyhr1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.830e-15
Identity = 62/221 (28.05%), Postives = 97/221 (43.89%), Query Frame = 2 
Query:  209 SIKNIVACSACFLSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN 832
            ++ ++V       + +   +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E   H   C     T   + EI D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N
Sbjct:   12 ALSHLVLAGVSLHAAVSSVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCPWHGPFHELTVHEAACAHPTKTGNELMEILDEMDQSHRKEMQLYNSIFSLLSFEKIGYTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERN 223
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. TrEMBL
Match: A0A1W6I183 (Cysteine/histidine-rich 1b (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0
Identity = 268/272 (98.53%), Postives = 269/272 (98.90%), Query Frame = 2 
Query:   23 TDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRFYQINDSEENYV 838
            TDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQF CNQSRWSL VRFY INDS+ENYV
Sbjct:    1 TDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFXCNQSRWSLXVRFYXINDSKENYV 272
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. TrEMBL
Match: A0A0R3WIL0 (TRAF-type domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS443 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 7.880e-57
Identity = 109/286 (38.11%), Postives = 165/286 (57.69%), Query Frame = 2 
Query:   38 ELNNAEQSSVD---DLSSGNFNLSSKQIPLEC-PQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSK-------DTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRFYQINDSEE---NYVSDDIG 853
            E+NN  Q  V    DL+  +  +++  I +   P K  N  +        ND+++   V+ SI+ +++C ACF S   MKEC+NGHL+C +C+L LRQ + PQCP CR  L+ + ++ L A+K++SELP+ C+ CG ++  KDL  H+L+ CPKRRV+C    LGCTW G+AEE   H+  C+V +       + S+S +     R+EQ   E+F  F +V R LE  + Q   V LS  + T     F+SDQFH +QSRW+L++     +D  E   N V+ ++G
Sbjct:    7 EMNNNSQEEVPTPLDLTVNSSTIATTDITVATSPAKAQNSQL--------NDLNH---VIQSIREVISCCACFNSDFGMKECANGHLLCHTCFLTLRQDDHPQCPTCRAVLYPDSRRALTAQKVLSELPDVCLECGQMMLHKDLVGHKLNACPKRRVSCGLAPLGCTWCGSAEEYHGHYEDCEVRRCLQERPLEESLSNVLARFRRREQMVREMFTCFSAVFRHLEGFELQSVCVPLSLARVTPGRLVFKSDQFHGSQSRWTLKLMVRFDDDGAEEIANPVASNVG 281
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. TrEMBL
Match: A0A5J4N8T4 (TRAF-type domain-containing protein OS=Paragonimus westermani OX=34504 GN=DEA37_0004658 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.275e-56
Identity = 98/228 (42.98%), Postives = 146/228 (64.04%), Query Frame = 2 
Query:  197 QVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSK---DTSISEIADYVA----RKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRF---YQINDSEENYVSDDI 850
            ++L SI+ +++C AC+ S   MKEC+NGHLICQ+C+L LRQ ERPQCP CR  L+S+ ++ LVA+K++SELP+ C  C   +  K L NH+L+ CPKR+V C    LGC W G A++  +H+  C + K   D  +    D++     ++EQ+  E F  F +VLR+LES + Q  TV L+ + +   T  +RSD FH NQSRW+ E+      Q++ +EEN +SD++
Sbjct:  100 RILRSIREVISCCACYSSDTIMKECTNGHLICQNCFLTLRQDERPQCPTCRANLYSDSRRALVAQKVLSELPDCCTDCNAQMLHKSLPNHRLNYCPKRKVACGLSVLGCEWTGWADQYDAHYSDCNLKKQLTDQPVGSNIDWLVNRFRKREQTMRETFHCFSNVLRQLESHELQTVTVTLANVSTNEHTLQYRSDHFHVNQSRWTAEITMKSPTQLHITEENPISDNV 327
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. TrEMBL
Match: A0A0R3WFD7 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS9581 PE=4 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.268e-56
Identity = 110/275 (40.00%), Postives = 156/275 (56.73%), Query Frame = 2 
Query:   35 LELNNAEQSSVDDLSSGNFNLSSKQI-PLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSK-------DTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLE--VRFYQINDSEE 829
            +E NN  Q  V        N S+  I     P KI    +        ND+++   V+ SI+ +++C ACF S   MKEC+NGHL+C +C+L LRQ + PQCP CR  L+ + ++ L A+K++SELP+ C+ CG V+  KDL  H+L+ CPKRRV+C    LGCTW G+AEE   H+  C+V +       + S+S +     R+EQ   E+F  F +V R LE  + Q   V LS  + T     F+SDQFH +QSRW+L+  VRF   +  EE
Sbjct:    6 VETNNNSQEEVSTPLDLTVNSSASGIVTAASPAKIQPSQL--------NDLNH---VIQSIREVISCCACFNSDFGMKECANGHLLCHTCFLTLRQDDHPQCPTCRAVLYPDSRRALTAQKVLSELPDVCLECGQVMLHKDLVGHKLNTCPKRRVSCGLAPLGCTWCGSAEEYHGHYEDCEVRRCLQERPLEESLSNVLARFRRREQMLREMFTCFSAVFRHLEGFELQSVCVPLSLARVTPGRLVFKSDQFHGSQSRWTLKLMVRFDDDDGVEE 269
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. TrEMBL
Match: A0A0X3NQE0 (Cysteine and histidine-rich protein 1 OS=Schistocephalus solidus OX=70667 GN=CYHR1 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.419e-55
Identity = 103/233 (44.21%), Postives = 139/233 (59.66%), Query Frame = 2 
Query:  173 GNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSK---DTSISE----IADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRFYQINDSEENYVSDDI 850
            G   DY   VL SI+ +++C ACF S   MKECSNGHL+C +C+L LRQ E PQCP CR  L+ + ++ L+A+K++SELP+ C  C + +  KDL+ H+L+DC KRRV C    LGC W G A+E   H+ +C V K   D  I E    +     ++EQS  E FQ F +V R LE  + Q  +V LS ++        RSDQFH NQSRW+LE+ F    D EE  V + +
Sbjct:   82 GATEDY-AAVLQSIREVISCCACFSSEFSMKECSNGHLLCHTCFLTLRQDEHPQCPTCRANLYPDTRRALIAQKVLSELPDVCSACNLTMLHKDLHGHKLNDCSKRRVACGLAPLGCPWCGQADEYRQHYAECFVRKILVDRPIEENLENVLSRFRKREQSLRETFQCFSTVFRHLEGHELQTVSVTLSPLRVNQGKMVMRSDQFHANQSRWTLELSF----DFEEPQVGEAL 309
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Cavefish
Match: cyhr1 (cysteine and histidine rich 1 [Source:NCBI gene;Acc:103031594])

HSP 1 Score: 87.8113 bits (216), Expect = 8.714e-19
Identity = 76/280 (27.14%), Postives = 126/280 (45.00%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSIS--EIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C +C     R  L++HQ  +C  R   C Y  +GC W G   E  +H + C     T I    I D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    DD   V ++P +    F+     TE+
Sbjct:   86 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSDCSYCLKQFPRSSLDHHQTEECQDRLTQCKYKRIGCPWQGPFHELCAHEVDCCHPSKTGIELMGILDEMDQSHRRELQLYNSIFSLLSFEKIGFTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLSFQLILKSKV-NSALECSFLLLKGPYDD---VKIKPVIQHHVFSNDANETEY 352
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Cavefish
Match: cyhr1 (cysteine and histidine rich 1 [Source:NCBI gene;Acc:103031594])

HSP 1 Score: 84.3445 bits (207), Expect = 5.365e-18
Identity = 73/262 (27.86%), Postives = 117/262 (44.66%), Query Frame = 2 
Query:  269 CSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSIS--EIADYVARKEQSWNEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEF 1006
            C+NGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C +C     R  L++HQ  +C  R   C Y  +GC W G   E  +H + C     T I    I D + +  +   +++ S FS+L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    DD   V ++P +    F+     TE+
Sbjct:   15 CTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSDCSYCLKQFPRSSLDHHQTEECQDRLTQCKYKRIGCPWQGPFHELCAHEVDCCHPSKTGIELMGILDEMDQSHRRELQLYNSIFSLLSFEKIGFTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLSFQLILKSKV-NSALECSFLLLKGPYDD---VKIKPVIQHHVFSNDANETEY 263
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Sea Lamprey
Match: cyhr1 (cysteine/histidine-rich 1 [Source:NCBI gene;Acc:767773])

HSP 1 Score: 74.3294 bits (181), Expect = 2.559e-15
Identity = 71/265 (26.79%), Postives = 118/265 (44.53%), Query Frame = 2 
Query:  266 ECSNGHLICQSCYLILR-----QFERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRV-NCNYCHLGCTWIGNAEESFSHHLQCKVSKDTS--ISEIADYVARKEQSWNEIFQSFFSV--LRRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEFF 1009
            +CSNGHL+C  C++ L      + E+  CP CR  +  S   + L  EK +SELP  C  C     R  L +HQ   C    + NC Y  +GC W G   E  +H  +C   K T   +  + D + +  +   ++F   F++  L ++  T+ Q+R         T D  T   + + +F+     W L+ R   +NDSE N        + ++   ++ + +S     F+L+    DD     + P +++  FT  G  TE+ 
Sbjct:    1 QCSNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPAECGFCLHQFPRSCLEHHQKELCNHFLLTNCRYQRIGCPWQGPFHEISAHEAECCHPKKTGSELMGVLDEMDQNHKKEMQLFNDIFTLLSLEKIGYTEVQFRPY------RTDDFITRLYYETPRFNILNQTWVLKGR---VNDSERNPNLSCKRALSFQLNLKSKL-SSPMECAFLLLRGPYDD---ARVTPVVHYFTFTNEGNETEYL 252
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Nematostella
Match: EDO46014 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRI7])

HSP 1 Score: 53.9138 bits (128), Expect = 3.108e-8
Identity = 34/109 (31.19%), Postives = 48/109 (44.04%), Query Frame = 2 
Query:  323 ERPQCPVCRIGL-HSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEI 646
            E+  CP CRI +  +   + L  EK +SELP +C  C     R   + H+  +C  R V C Y  LGC W G   E   H   C     T +  +    A  E++  E+
Sbjct:   18 EQATCPSCRIDISRNNCSRNLAVEKAVSELPTACQFCDNEFPRSIASIHEREECSDRLVRCKYKRLGCPWQGPHHELALHEGACPHPGKTGLELMEALNAIDEKNEMEL 126
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Nematostella
Match: EDO32849 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STV3])

HSP 1 Score: 49.2914 bits (116), Expect = 1.485e-6
Identity = 36/127 (28.35%), Postives = 50/127 (39.37%), Query Frame = 2 
Query:  227 ACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSE-PKKGLVAEKIMSELPESCIH-------------------------------CGIVLCRKDLNNHQLSDCPKRRVNCNYC 511
             C   F+S + +KEC  GH +CQ CY  + +   P+CP C   L  + P      E  M+ELP  CI+                               CG    R+    H   DCPK+ ++C YC
Sbjct:   57 VCEDIFVSPVQIKEC--GHRLCQHCYKTIWRSPEPKCPKCSGDLDDKIPDVDQAFENDMNELPCRCINHEWGCKVEVPFTQMITHKGECEYSDILCDNDCGAKFQRRFKQKHLDKDCPKKIISCPYC 181
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Medaka
Match: cyhr1 (cysteine and histidine rich 1 [Source:NCBI gene;Acc:101156262])

HSP 1 Score: 80.8777 bits (198), Expect = 2.271e-16
Identity = 72/273 (26.37%), Postives = 119/273 (43.59%), Query Frame = 2 
Query:  218 NIVACSACF-LSLIPMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGLHSEPK-KGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSW---NEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFT 982
            +++ C+ C  L    + +C+NGHL+C  C++ L      + E+  CP CR  +      + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E  +H  +C     T  +E+   +   +QS     +++ S F +L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    DD   V ++P +    F+
Sbjct:   93 SVLCCTVCLDLPKASVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKNLCCRNLAVEKAVSELPTDCTFCLKQFPRSSLERHQKEECQDRVTQCKYKRIGCPWQGPFHELPAHESECSHPTKTG-TELMGILGEMDQSHRRDTQLYNSIFGLLCYEKIGFTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLSFQLILKSKV-NSALECSFLLLKGPYDD---VRIKPVIYHHSFS 351
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Medaka
Match: cyhr1 (cysteine and histidine rich 1 [Source:NCBI gene;Acc:101156262])

HSP 1 Score: 79.7221 bits (195), Expect = 2.367e-16
Identity = 70/259 (27.03%), Postives = 112/259 (43.24%), Query Frame = 2 
Query:  257 PMKECSNGHLICQSCYLILR-----QFERPQCPVCRIGLHSEPK-KGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSW---NEIFQSFFSVL--RRLESTDPQYRTVALSFIKSTSDTFT---FRSDQFHCNQSRWSLEVRFYQINDSEEN---YVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFT 982
            P  +C+NGHL+C  C++ L      + E+  CP CR  +      + L  EK +SELP  C  C     R  L  HQ  +C  R   C Y  +GC W G   E  +H  +C     T  +E+   +   +QS     +++ S F +L   ++  T+ Q+R         T D  T   + + +F      W L+ R   +NDSE N        + ++   ++ V NS     F+L+    DD   V ++P +    F+
Sbjct:   10 PQGQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKNLCCRNLAVEKAVSELPTDCTFCLKQFPRSSLERHQKEECQDRVTQCKYKRIGCPWQGPFHELPAHESECSHPTKTG-TELMGILGEMDQSHRRDTQLYNSIFGLLCYEKIGFTEVQFRPY------RTDDFITRLYYETPRFTVLNQTWVLKAR---VNDSERNPNLSCKRTLSFQLILKSKV-NSALECSFLLLKGPYDD---VRIKPVIYHHSFS 254
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Planmine SMEST
Match: SMESG000001532.1 (SMESG000001532.1)

HSP 1 Score: 754.207 bits (1946), Expect = 0.000e+0
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 2 
Query:   14 MDETDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRFYQINDSEENYVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEFFTASNVEIKLNPRNCHIIHVEIGIIRKTEETDD 1105
            MDETDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRFYQINDSEENYVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEFFTASNVEIKLNPRNCHIIHVEIGIIRKTEETDD
Sbjct:    1 MDETDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSIIVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISEIADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTFRSDQFHCNQSRWSLEVRFYQINDSEENYVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEFFTASNVEIKLNPRNCHIIHVEIGIIRKTEETDD 364
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Planmine SMEST
Match: SMESG000023276.1 (SMESG000023276.1)

HSP 1 Score: 107.457 bits (267), Expect = 5.155e-25
Identity = 80/270 (29.63%), Postives = 130/270 (48.15%), Query Frame = 2 
Query:  212 IKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERP-QCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDT--SISEIA-DYVARKEQSWNEIFQSFFSVLR--RLESTDPQYRTVALSFIKSTSD---TFTFRSDQFH-----CNQSRWSLEVRFYQINDSEENYVSDDIGYRFTKENGVGNSRRHYGFVLMSIKTDDNVKVYLRPQLNFTKF 979
            +KN+++CS C        +C NGHLIC +C   L+Q      CPVCRI L     + L+AE++ SELP  C  C  V+  K +  H+  +C KR V C Y   GC WIG  E S  H  +C +S  T   + EI  + +AR  QS     Q + +++   R+++   +      +  KS S+      F+S         CN   + L++   ++N++E     + + Y    EN    ++ +  F L+SIK ++ V + ++  L+   F
Sbjct:   95 MKNLLSCSICLEVSSYSNQCPNGHLICITCSGRLQQTPGDLNCPVCRISLKQGLHRSLLAEQLTSELPAECKFCDTVMAVKYIKKHETDECTKRMVPCKYKMFGCNWIGIEELSKDHEDECSISNKTVGMLREIVNENIARDLQSLQSPLQLWKAIISKLRVQAVGSRMLIRQTTLNKSNSEDANQTVFKSPMIRIPFTCCNLHGFYLDMYVTKMNETE----PEKLHYVLRSEN---RTKINLMFYLLSIKINETVNLDVQDSLHSHHF 357
[Close]
BLAST of Cysteine and histidine-rich protein 1 vs. Planmine SMEST
Match: SMESG000067104.1 (SMESG000067104.1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.017e-21
Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 2 
Query:  212 IKNIVACSACFLSLIPMKECSNGHLICQSCYLILRQFERPQ---CPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRKDLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDT 589
            +K ++ CS C        +C NGHLIC +C L L+Q    +   CPVCR+ L    ++ L+AE+++SELP  C  C   +  + +  H+   CP R +NC Y   GC W G A++   H   C V   T
Sbjct:   72 MKKLLTCSVCLEVRKQANQCQNGHLICINCTLCLQQSSSSKEINCPVCRVPLTGYYQRSLLAEQLVSELPTKCRFCSTTMSVRQMQQHESEICPARTINCQYALFGCPWKGVAKQRKLHESLCNVGLST 200
The following BLAST results are available for this feature:
BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
CYHR11.172e-1628.96cysteine and histidine rich 1 [Source:HGNC Symbol;... [more]
CYHR12.521e-1629.81cysteine and histidine rich 1 [Source:HGNC Symbol;... [more]
CYHR11.420e-1530.35cysteine and histidine rich 1 [Source:HGNC Symbol;... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
CG324867.366e-1433.07gene:FBgn0266918 transcript:FBtr0073004[more]
sinah6.408e-730.51gene:FBgn0259794 transcript:FBtr0301683[more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
cyhr11.566e-1726.07cysteine/histidine-rich 1 [Source:NCBI gene;Acc:76... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
cntn25.474e-1627.86contactin 2 [Source:Xenbase;Acc:XB-GENE-6070188][more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Cyhr13.748e-1628.18cysteine and histidine rich 1 [Source:MGI Symbol;A... [more]
Cyhr11.282e-1330.63cysteine and histidine rich 1 [Source:MGI Symbol;A... [more]
Cyhr14.423e-1330.63cysteine and histidine rich 1 [Source:MGI Symbol;A... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q08CH8|CYHR1_DANRE1.185e-1626.07Cysteine and histidine-rich protein 1 OS=Danio rer... [more]
sp|Q2TAD9|CYR1B_XENLA5.130e-1626.79Cysteine and histidine-rich protein 1-B OS=Xenopus... [more]
sp|Q6GNX1|CYR1A_XENLA5.178e-1626.43Cysteine and histidine-rich protein 1-A OS=Xenopus... [more]
sp|Q7YR89|CYHR1_BOVIN1.745e-1530.20Cysteine and histidine-rich protein 1 OS=Bos tauru... [more]
sp|Q5BK76|CYHR1_RAT1.830e-1528.05Cysteine and histidine-rich protein 1 OS=Rattus no... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1W6I1830.000e+098.53Cysteine/histidine-rich 1b (Fragment) OS=Schmidtea... [more]
A0A0R3WIL07.880e-5738.11TRAF-type domain-containing protein OS=Hydatigena ... [more]
A0A5J4N8T44.275e-5642.98TRAF-type domain-containing protein OS=Paragonimus... [more]
A0A0R3WFD76.268e-5640.00Uncharacterized protein OS=Taenia asiatica OX=6051... [more]
A0A0X3NQE01.419e-5544.21Cysteine and histidine-rich protein 1 OS=Schistoce... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
cyhr18.714e-1927.14cysteine and histidine rich 1 [Source:NCBI gene;Ac... [more]
cyhr15.365e-1827.86cysteine and histidine rich 1 [Source:NCBI gene;Ac... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
cyhr12.559e-1526.79cysteine/histidine-rich 1 [Source:NCBI gene;Acc:76... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO460143.108e-831.19Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO328491.485e-628.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
cyhr12.271e-1626.37cysteine and histidine rich 1 [Source:NCBI gene;Ac... [more]
cyhr12.367e-1627.03cysteine and histidine rich 1 [Source:NCBI gene;Ac... [more]
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BLAST of Cysteine and histidine-rich protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000001532.10.000e+0100.00SMESG000001532.1[more]
SMESG000023276.15.155e-2529.63SMESG000023276.1[more]
SMESG000067104.11.017e-2135.66SMESG000067104.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30009538 ID=SMED30009538|Name=Cysteine and histidine-rich protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1189bp
ATTTGAATTTCAAATGGATGAAACGGATCTAGCTTTGGAGCTGAATAATG
CTGAACAGTCGAGCGTGGACGATTTGAGTTCCGGCAATTTTAATTTATCC
AGCAAACAAATACCCCTTGAATGTCCACAGAAAATCTCAAATGATTCCAT
AATCGTAAACAATTTCAATTTCGGAAACGACATTGACTATTTAAAACAAG
TCCTTCTTTCAATTAAGAACATTGTTGCGTGTAGTGCTTGTTTTCTGTCT
TTAATTCCAATGAAAGAATGTTCAAATGGACATTTGATTTGCCAATCATG
CTATTTAATTCTTCGCCAATTTGAAAGACCTCAGTGTCCGGTTTGTAGAA
TCGGGCTGCACTCTGAACCGAAAAAGGGCTTGGTCGCCGAAAAGATCATG
TCTGAACTACCAGAATCGTGCATCCACTGTGGAATAGTTTTATGTCGAAA
AGATCTAAACAATCATCAACTATCTGATTGTCCGAAACGACGGGTGAACT
GTAATTATTGTCATTTGGGTTGCACGTGGATTGGAAATGCCGAAGAATCG
TTTTCACATCATCTTCAGTGTAAAGTCAGCAAAGACACGAGTATCAGTGA
AATAGCGGATTATGTAGCTCGAAAGGAACAAAGCTGGAATGAAATATTCC
AAAGCTTTTTTAGTGTTTTAAGACGTCTAGAATCAACTGATCCGCAATAC
AGAACAGTTGCGTTAAGTTTCATTAAGTCTACATCTGATACTTTTACGTT
TCGTAGCGATCAGTTTCACTGCAATCAGTCCAGGTGGAGCCTAGAAGTTC
GATTTTATCAAATTAATGATTCAGAAGAAAACTATGTATCAGATGATATA
GGATATAGGTTCACCAAAGAAAATGGCGTTGGAAATTCACGGAGACATTA
TGGGTTTGTTTTGATGAGTATTAAGACTGATGATAATGTAAAGGTTTATC
TTCGTCCTCAATTAAATTTCACTAAATTTACAATACGTGGTCAAGTCACA
GAATTCTTTACTGCGAGTAATGTAGAAATAAAGTTGAATCCTCGTAATTG
TCATATAATACATGTAGAGATAGGTATTATCCGAAAAACCGAAGAAACAG
ATGATTGATAAAAAAGATATTAAGAGTTATGAATGATTGACATAAGGTAC
CTATTAAAATTGTTAATAAATAGTGAATTATCTCAAAAA
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protein sequence of SMED30009538-orf-1

>SMED30009538-orf-1 ID=SMED30009538-orf-1|Name=SMED30009538-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=369bp
FEFQMDETDLALELNNAEQSSVDDLSSGNFNLSSKQIPLECPQKISNDSI
IVNNFNFGNDIDYLKQVLLSIKNIVACSACFLSLIPMKECSNGHLICQSC
YLILRQFERPQCPVCRIGLHSEPKKGLVAEKIMSELPESCIHCGIVLCRK
DLNNHQLSDCPKRRVNCNYCHLGCTWIGNAEESFSHHLQCKVSKDTSISE
IADYVARKEQSWNEIFQSFFSVLRRLESTDPQYRTVALSFIKSTSDTFTF
RSDQFHCNQSRWSLEVRFYQINDSEENYVSDDIGYRFTKENGVGNSRRHY
GFVLMSIKTDDNVKVYLRPQLNFTKFTIRGQVTEFFTASNVEIKLNPRNC
HIIHVEIGIIRKTEETDD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000208testis
PLANA:0002089reproductive organ
PLANA:0003304testis primordium
Vocabulary: INTERPRO
TermDefinition
IPR039338CYHR1
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: molecular function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0046872metal ion binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 135..195
e-value: 2.8E-6
score: 29.5
IPR039338Cysteine and histidine-rich protein 1PANTHERPTHR23059FAMILY NOT NAMEDcoord: 69..297
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 136..175
score: 9.675
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 74..120
IPR008974TRAF-likeSUPERFAMILYSSF49599TRAF domain-likecoord: 137..202