TIR domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30009450 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of TIR domain-containing protein vs. TrEMBL
Match: A0A210PZ21 (Vacuolar protein 8 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT23907 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.366e-47 Identity = 174/698 (24.93%), Postives = 332/698 (47.56%), Query Frame = 1 Query: 103 TIDEINLKICSEAEDIINKVKSL--QKFITDLQPQE-SSEFQQIVKAINSKYFSLNKFNVKLEDVKRLRLSNANVLIKLDIFNIYYTILVQILHNVFGKNYSEEIDNKFHSAIKNLIDIFFNYTDASSDFGKEFCKNDKLLHLYYKIISEFKENCLNKSLSKN--ITDLLRICIST----LYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNK--ILIQKEFR--NKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFE-------------------DAXXXXXXXXXXXXAGNVQKKIDEIDHIDPVH--VKNQSKNNQD-ITKWANERCKNWFDE--IGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDL 2085 T +EI KI ED ++ + L Q + D + + S+ F++I +F + F++ ++D + +++ ++ + ++V IL + + + +D + + N + N+TD + + + L ++E + +N L+ + D +R+ IS+ +N + D N N ++ + F+DL+ + + K + +A+ +A I DE +S++ ++D+ + ++ L +++ + R G S +EL++ + ++++ND NK+ LVE GILP L E +D Q A+G +W+L+FD++N+ +++ E + + + LK DK+ + K+CN G L + + EN + S NYK+I + T + V +++++ EV ++ HIM+SY W+N I+ KI D L GFK+W+D E + +++MA+A++N+ V++ SQ YK+SDNCRAEA+YA KKK VIP+ ++ Y PDGWLG + DF G+Y+FE D +++ A ++ + E + P H V + + + + KW ++ W + + +++ K TG E+ FL + + FY++ + LKIT+L Sbjct: 144 TEEEIKEKINKTFEDALHTWEPLSDQSRLVDAETGKCSAAFRRISNNTFLYHFRMKAFSLSIQD--EFKSDYYRLMVTENVVPKFCDMVVYILKHGY-EAEDGTMDAEMFKPLSNTFGLLTNFTDNKIERADIVADHPEFLMC----LAENFKKWMNPYLAGDQIREDQIRVAISSPLSIFHNIAMQDRNINR--MRSLGFVDLLTPFVSSPKEKTRLSAVATLADIVDEKQSEIIRTDVGVMKFIKNSLARAMKEKSRRIFGWSPQELARTVRRIARNDANKRALVEQGILPPLVKLAESEDMEEQREAVGAMWTLSFDKENQKDMILDTECKPVDTFIRLKNSPDKEVR------------------------KTCN------GALWTMR------------------ENLAQ----SENYKDIRERYTSPQPSPAHVATERRQ----EVKSEGHIMISYQWANQAILKKIRDNLRANGFKVWMD--IDDMEGSTLDAMARAVENADVVLVCYSQKYKDSDNCRAEAEYAFQKKKKVIPLKMELNYIPDGWLGFICGAKLFFDFGGKYSFESRVEGLVKELWSKMSKDVVDGVVVPESATVVYSAPVAKENVAEPVYSAPPHGGVSHVTMTTVELVKKWKDQDVDKWMAKHSLSTQQV---KKMTGVEVAFLMLLKTESPDFFYKVLTDTLKITNL 771
BLAST of TIR domain-containing protein vs. TrEMBL
Match: A0A1S3HGA3 (uncharacterized protein LOC106155047 OS=Lingula unguis OX=7574 GN=LOC106155047 PE=4 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 6.226e-47 Identity = 143/553 (25.86%), Postives = 258/553 (46.65%), Query Frame = 1 Query: 448 IFFNYTDASSDFGKEFCKNDKLLHLYYKIISEFKENCLNKSL---SKNITDLLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFE-DAXXXXXXXXXXXXAGNVQKKIDEIDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDL 2094 IF+NY+DAS F + + L ++ + + + S+ + + L+ I ++N V+ I EMK +D +K + E + K A++ AYI ++ ++ + ++ ++I+LLK++L + R++G S E++KG+G +++ND+NK L+ E G +P L L +D+ E AL LW L FD+ NK IQ+E C +V L H K+ N + ++ N +S +D L + + D + ++ K T A H+M+SY+W + +++K+ D L +GF +W+D + +++MA+A++N+ V+I +S YK+S NCR EA+Y+ K ++P+M+Q Y+PDGWLG+ + + DF+G+YNFE L + R K G + + E + P ++ + W E W ++ + R+ TG ++ FL+ I E F+ +++ I L+DL Sbjct: 153 IFWNYSDASLKFAESVGLSGYLEYMMNDL-DAIDKGVIAGSIDTEEEGTSLALKSAIGCVHNCA--KVDTLRPIFHEMKVVDRLKPYLHTAETENKAVAIMTEAYIINDEQNDILATEDGIFEFIIDLLKQALESDDHRAEGFSAWEMAKGLGAMARNDQNKTLIAEKGAIPFLAAMLASEDEEEVEEALSTLWKLGFDQNNKRKIQEE-------------PNCF---------ERVKGLTKHKNSRITKAANGVVWILSQ-------NQLSSEDVLQSQARTDSAS--------------------------LREKSASTAAGGKA--GHVMISYNWGDQKVLLKVKDELRRRGFNIWMD--VEQMGGSTLQAMAEAVENAAVVLICMSDRYKDSPNCRTEAEYSFKLNKDIVPLMMQRNYKPDGWLGMILGSKLFFDFSGKYNFECKVDELAKELGNRGKTGGIVPVMTETAALAPSF----GSGKKNPSHWNKEDVAQWLEKNNLNRMPKFTKLTGEQIAFLKEIHTNAPEFFFCYMTDKMGIVQLQDL 639
BLAST of TIR domain-containing protein vs. TrEMBL
Match: C3YBW8 (Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_130981 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 7.587e-43 Identity = 148/570 (25.96%), Postives = 273/570 (47.89%), Query Frame = 1 Query: 385 GKNYSEEIDNKFHSAIKNLIDIFFNYTDASSDFGKEFCKNDKLLHLYYKIISEFKENCLNKSLSKNITD--LLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXX--XXXXXXXXXAGNVQK-KIDEIDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKIT 2079 G + +E + + AI+N ++++DAS +F K K L+ +I + K+ K+ N L+R + L+N V EN I++ + +D + + + ++K ++ +AYI E ++ + +D IS+++ + ++++++ RSQG S E++ GI +L++ND+NK ++V+ G LP+L +E D+ QE +W L F + NK I+ E R + +LK D K Q T A + L + E +AK S++D+ S + Q+D + + + KS++ E+ + + HIM+SY W + ++K+ D L + G+++W+D + +++MA+A++NS V+I +SQ YK S NCR EA+Y +K ++P+M++ KY+PDGWLG + Y DF+ ++ FED++ + A VQK + E+ + + W NW E +++ + TG +L FL+++ GE+ + N K T Sbjct: 145 GNMFDDETVWECYYAIRNCC---WSFSDASFNFAKRLGKAG----LFPMLIEDLKQ--YKKTFQTNQAHNWLVRCSLGILHNCA--KVMENRAILRPLGLIDQLLPWINTSDEELKTVTVMTLAYIVGEEDNDLIMADDSVISFIMTVFEEAVDSELMRSQGFSAMEMAMGISQLAQNDDNKVMIVKKGALPLLVQLMETGDEEEQEQGANAVWQLAFHDDNKDKIRAEPR-LMYQLKRLKDSKNQE--TAKAANGALWVLDKQAREEKAKEL----SEKSEESSREDLQEGSGPHIM-ISYQWDHQKTLVKEKAKELS---------------EKSEESSIEDLQEGSGPHIMISYQWDHQKTLVKVKDRLQSYGYRVWMD--LEQMGGSTLQAMAEAVENSVVVLICMSQKYKESPNCRTEAEYTFQLRKQIVPLMMEGKYKPDGWLGAILGAKLYFDFSAQHKFEDSIGKLIKELGQRGRSAQLVQKVQAVEVGAGGAGALPIMPPAKPRVLDWKQAEVDNWIAENQLEKNFL-RELTGPQLHFLQSLR---GEIGFYAPSNHSKST 674
BLAST of TIR domain-containing protein vs. TrEMBL
Match: V4AY29 (TIR domain-containing protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_230877 PE=4 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.629e-42 Identity = 147/525 (28.00%), Postives = 253/525 (48.19%), Query Frame = 1 Query: 616 LYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSL--NTRFSR-SQGL--STEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTK---LDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTW--TLTNLEEVKSKKQ-ETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFE---DAXXXXXXXXXXXXAGNV-----QKKIDEIDHID----PVH-------VKNQSKNNQDITKWANERCKNWFDEIGIK--RIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDL 2094 ++N + D N +++E+KF ++K+ + IK A+L +A I E ES +++ I +L+ K++L ++R ++ G+ EL+KGIG+L+ ND NK+LLVE G LP+L + DD Q+ AL +W+L F+E+N ++KI+EL LD K + G + D S Y T+ ++++ +K I D L T++ + K + ET E++ K H+M+SY W + +I+ ++ D + K+W+D E + +++MA A++N+ V+I +S+ YK+S NCRAEA+YA +K VIP++++ Y+PDGWLG+ + + DF+G+Y FE + L+ + Q + G V K +D +D D PV K ++ W + K+W + G+ R+ + TG E+ FL+ + E +Y K +L I L D+ Sbjct: 3 IHNVAMTDAN--IPLLQELKFAPVLKNYLSFTNDTIKLTAILGLADIMTEEESHYVETNNEVIIFLLMTFKRALFASSRTAKDGNGMIWGVLELAKGIGRLASNDGNKKLLVEKGSLPLLLKLAKSDDLEEQKEALKSMWALAFNEEN--------QDKIIELPGLIEFLDDKNRTGFS-------------------------------------DTRSTCYGILWTMRTKLQQSSQ--------FKAIGDRLVVKKTMSPSKTFTEKGELETSEKDSKNKGHVMISYQWGDQEILKRVRDKIRGSKKKVWMD--IDDMEGSTLQAMADAVENADIVLICMSRKYKDSPNCRAEAEYAHQLRKTVIPLIMERSYKPDGWLGMILGAKLFYDFSGKYPFESKIEGLLREISQKLNLGDGAVAGPTGSKGVDVVDGPDQKIVPVQNDMVYAPYKAPPPKLGEVKSWNAAQVKDWLKKYGLSGTRV---EKLTGREIAFLQKLQASTPEYYYMTVKTDLGIKTLTDM 467
BLAST of TIR domain-containing protein vs. TrEMBL
Match: W4XMC6 (TIR domain-containing protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.395e-39 Identity = 125/435 (28.74%), Postives = 209/435 (48.05%), Query Frame = 1 Query: 484 GKEFCKNDKLLHLYYKIISEFKENCLNKSLSKNITDLLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMF-KSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFED 1785 G + K ++ L Y I+ E +E L + K T L + L+N L N + +E K ++ ++ ++ + +K +++ +AYI +E + ++ + ++I YL+E+LK + N++ R QGLS EE++ +G+L+ +D NK +VE G LP++ L + QE + +W+L F + + ++ R+ + C L L T S AK+ N VI KKD+ + DD T L S+KQ HIMLSY W +V+K+ D L G+ +W+D + +++MA+AI+N+ A+V+ +S+ YK S NCR EA+YA +K +IPVM++E Y+PDGWLGI + Y DF+GR + E+ Sbjct: 7 GDPYLKAVSMMTLAY-IVEEGQEEILAE---KGTTSL-----NILHN--LAKAPGNKHVYREEKVVESMEPFLEGDP-YLKAVSMMTLAYIVEEGQEEILAEKGTNTIEYLVEILKDAQNSKDKRCQGLSVEEVTAALGRLAVHDNNKYKIVEAGGLPLMISMLHDESVETQEASAHAVWNLAFSDD----VSEKLRS---------NTDCMMALQ---------DLSTSSSSEVAKAANGALWVINKEGEKKDLVKENEDD---------------------------------TGLGHSLSRKQ----------PHIMLSYQWGCQPLVLKMRDVLAKAGYNIWVD--VDCMYGSTLQAMAEAIENACAIVMCMSERYKESPNCRTEAEYAFQLRKRIIPVMMEEYYQPDGWLGIILGAKFYMDFSGRLDIEE 362
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO45030 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RU69]) HSP 1 Score: 108.612 bits (270), Expect = 2.255e-24 Identity = 73/260 (28.08%), Postives = 133/260 (51.15%), Query Frame = 1 Query: 1348 GLTWTLTNLEEVKSKKQETEEEEVAT---KDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNF--EDAXXXXXXXXXXXXAGN---VQKKIDEIDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIK---RIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDL 2094 G+ W E++ K+ T +E A ++H+M+SY W ++++ L G+++W+D + +++MA A++N+ V++ +SQ YK S NCR+EA+YA +K ++P+M+++ YRPDGWLG+ + + DF+ + +D+ L K+I G V+ K+ + H D V V + DI+KW+ + NW + G++ H +G L L + E FY K + L+++ Sbjct: 572 GVLW------EIEGKESHTVKESTADEPLRNHVMISYQWDVQPTMIQVKSKLQAAGYRVWMD--LEQMGGSTLQAMANAVENAEVVLMCVSQKYKESPNCRSEAEYAFQLRKDIVPLMMEKSYRPDGWLGMIMGAKLWIDFSDKQTLRVDDSFEKLQKEIGMRGRGRGNVVESKLVAVQH-DVVDVFPKI----DISKWSKDDVMNWMNGFGLRLGNDSTIASHLSGKLLQRLAKLRSESPEFFYSSVKQDFGFAHLQEV 818 HSP 2 Score: 70.4774 bits (171), Expect = 1.710e-12 Identity = 55/201 (27.36%), Postives = 103/201 (51.24%), Query Frame = 1 Query: 607 ISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKC---EEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALG--VLWSLTFDEKNK--ILIQKEFRNKILELKTKLD---KKCQAGLTHDTAGSQVPTLQTHSVE 1179 ++T TM H+++ + K D +K L+ E + ALL +AY+ DE+ + + + I +LI +L KS ++ +R G + EL++G+ +++ ND NK+L+ + G +P+L + + + K +++ G LW L FD +NK IL + EL+ D KK AG+ + G + T++ + + Sbjct: 393 LNTAMGTM-HNLSRRIPCRQYFKKADTVKVLLPMLNDEVSQFAAKALLILAYLTDESNNSLIMASEEPIQFLIHILSKSCSSNSNRYLGFTNSELAEGLSQIAVNDSNKKLIGQHGAIPIL-VDMLANAKNDEQRRCGAEALWVLAFDNENKEAILTTPNAVELLKELQHSEDDSVKKAAAGVLWEIEGKESHTVKESTAD 591
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO41008 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5P1]) HSP 1 Score: 105.531 bits (262), Expect = 3.112e-23 Identity = 48/110 (43.64%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 1432 HIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDF 1761 H+MLSY W D+V+K+ D L G+K+WID E + +E+MA A++N+ AV++ +S+ YK S NCR+EA+Y+ +K +IP+M++ +Y+PDGWLGI + + DF Sbjct: 554 HVMLSYQWGYQDVVLKVRDELRAAGYKVWID--VEQMEGSTLEAMASAVENAAAVLMCVSRAYKESPNCRSEAEYSFQLRKDIIPLMMEPQYKPDGWLGIIVGAKLWMDF 661 HSP 2 Score: 103.605 bits (257), Expect = 1.424e-22 Identity = 64/229 (27.95%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1423 TKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXXXXXXXXXXXAGNVQKKIDEI------------DHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRI-VWPKHYTGNELDFLRTISQVPGEVFYQISKNEL 2070 ++ HIM+SY W N ++ + L G K+W+D + +E+MA+A++N+ ++I +SQ Y++S NCR+EA+YA ++K ++P+M+++ YRPDGWLG+ + + DF R + + ++ L+K+++ + +Q+ D + D D + D++KW E W +IG+ K G+ L L + Q E +Y K ++ Sbjct: 1010 SQQHIMISYQWDNQKAMLAVNKRLKEAGHKVWMD--VEQMGGSTLEAMARAVENASVILIAMSQRYQDSPNCRSEAEYAFQRRKKIVPLMMEQDYRPDGWLGMILGAKLWMDF--RESVDTGIVHLMKELQYNQTAALQQPHDPVTVDTTTVISSPPDKEDGPPGPTDVVDRPDVSKWKKEDVAKWLSDIGLSSSNKVRKKLDGSMLILLYRLKQESPEFYYASVKKDM 1234 HSP 3 Score: 58.151 bits (139), Expect = 1.151e-8 Identity = 37/125 (29.60%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 697 LMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGV--LWSLTFDEKNKILIQKE 1065 MKC ALL +AY+ DE + + +D I++L+ +L +++ + G + E++ GIG+++ ND+NK+L+ + +L L K+ K + E G+ L+ L+FD +NK ++ K+ Sbjct: 846 FMKCGVTYFVMNALLCLAYLVDERNNDLIMADEEPITFLLRMLSSAISDSRRQHLGFAAWEIACGIGRVASNDKNKRLIGRHDGVSILST-LVKEAKNDAERVYGLQALYMLSFDGENKKILCKD 969
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO39316 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAI7]) HSP 1 Score: 80.8777 bits (198), Expect = 1.464e-16 Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 1432 HIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKP----VIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDA 1788 H+MLSY W D+V K+YD L G ++W+D + ++ SMA+ + + + F+S Y S NC+ E YA K ++PVM ++ ++ GWLGI GL + DF NFE++ Sbjct: 3 HVMLSYQWDIQDLVKKVYDGLRAYGIRVWMDIH-GGIRGDINGSMAKGVDGAAILCCFMSTKYSESKNCKKELSYADGKTGCEEVIIVPVMCEKGFKAKGWLGIITAGLLWIDFRDEANFENS 124
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO33720 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRG5]) HSP 1 Score: 72.7886 bits (177), Expect = 4.703e-16 Identity = 30/66 (45.45%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 1567 AQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFA 1764 A A++NS V++ S+ YK+S N R+EA+YA ++KKP++P+M++ Y+PDGWLG+ + Y +FA Sbjct: 10 ANAVENSAVVLMCASRKYKDSVNYRSEAEYAYTQKKPIVPLMMENGYKPDGWLGMIMGSKLYFNFA 75
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO33105 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7ST59]) HSP 1 Score: 56.225 bits (134), Expect = 4.358e-8 Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 1 Query: 1435 IMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVI 1683 IMLSY+W V ++Y L + F+ W+D + + A A++NS +V F+++ Y+ S NC E +YA K+KP+I Sbjct: 413 IMLSYNWGIQSFVREVYMELSQQTFQTWMDIWGGMQGNINEAM-ATAVENSTMLVAFLTEKYQQSVNCNLELKYATMKEKPII 494
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000008937.1 (SMESG000008937.1) HSP 1 Score: 1322.38 bits (3421), Expect = 0.000e+0 Identity = 676/691 (97.83%), Postives = 683/691 (98.84%), Query Frame = 1 Query: 25 MQATSKPQKRKVVGEEIVSKPITRKLTIDEINLKICSEAEDIINKVKSLQKFITDLQPQESSEFQQIVKAINSKYFSLNKFNVKLEDVKRLRLSNANVLIKLDIFNIYYTILVQILHNVFGKNYSEEIDNKFHSAIKNLIDIFFNYTDASSDFGKEFCKNDKLLHLYYKIISEFKENCLNKSLSKNITDLLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXXXXXXXXXXXAGNVQKKIDEIDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDLR 2097 MQATSKPQK+KVVGEEIVSKPITRKLTIDEINLKICS AEDIINKVKSLQKFITDLQPQESSEFQQIVKAINSKYFSLNKFNVKLEDVKRLRLSNANVLIKLDIFNIYYTILVQILHNVFGKNYSEEIDNKFHSAIKNLIDIFFNYTDA+SDFGKEFCKNDKLLHLYYKIISEFKENCLNKSLSKN+TDLLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIA ETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHD GSQVPTLQTHSVES A +CNRIP++IGNLESKKDMNSVSYDD LCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYNMSEEENLMESMAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDALILLLKQIKRIKAGNVQKKIDEIDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIK IVWPKHYTGNELDFLRTISQVPGEVFYQI+KNELKITDLKDLR Sbjct: 1 MQATSKPQKQKVVGEEIVSKPITRKLTIDEINLKICSVAEDIINKVKSLQKFITDLQPQESSEFQQIVKAINSKYFSLNKFNVKLEDVKRLRLSNANVLIKLDIFNIYYTILVQILHNVFGKNYSEEIDNKFHSAIKNLIDIFFNYTDANSDFGKEFCKNDKLLHLYYKIISEFKENCLNKSLSKNLTDLLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIAGETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDITGSQVPTLQTHSVESPAINCNRIPEIIGNLESKKDMNSVSYDDVLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYNMSEEENLMESMAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDALILLLKQIKRIKAGNVQKKIDEIDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIKSIVWPKHYTGNELDFLRTISQVPGEVFYQITKNELKITDLKDLR 691
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000008941.1 (SMESG000008941.1) HSP 1 Score: 334.724 bits (857), Expect = 4.934e-104 Identity = 218/600 (36.33%), Postives = 350/600 (58.33%), Query Frame = 1 Query: 349 YTILVQILHNVFGKNYSEEIDNKFHSAIKNLIDIFFNYTDASSDFGKEFCKNDKLLHLYYKIISEFKENCLNKSLSKNITDLLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNT-RFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQ---FDENTEEI---SKNSFNYKNILDGLTWTLTNL--EEVKSKKQE--TEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXXXXXXXXXXXAGNVQKKIDE------IDHIDPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDLR 2097 Y L ++ + + + S+E+ N + L+DIF ++ + +FG E CK + L+ + II E+K C+N SLS+ +L + I LY+T+++D N + ++K + ++ KC IK L VAYI++E +S F D+ SI +I++L S+ T +S Q EL K + +LSKND+NK+ +VEMGILP+LK LE + + + ++L +L++L++DE+NK I ++F + +L+ L Q+P + + K N + K N K ++ + Y E++ N +I ++S + K L+GL LTN E + S + ++ + + H+M+SY NAD +K+YD L + FKLWIDK++M +NLME+MAQA++NS+AV+I IS YKNS++CRAEAQYA KKP+IP+++QEKYRPDGWLGICI G+QY +F+G+Y+ E+++ +L+KQ+++ K N Q+K + DH + N ++ W+N + NWF +IGIK+ W HYTG+EL+FL++IS GE + ++EL+I DLKD+R Sbjct: 82 YLSLTKLFNEIKENHTSKEVGNNLPRSFTVLLDIFARCSETNQEFGDEICKRENLIQFFVMIIKEYKLPCINGSLSETELKILELSIRNLYSTLIYDSEVNIHKLHKLKVWESLQYFEKCPNQDIKIRLALLVAYISEEKDSSGFVVDISSIPIIIKVLSDSVKTAEYSSKQEYPILELIKAVERLSKNDKNKRKMVEMGILPILKTLLETNFTKYRHISLSILFNLSYDERNKSEIAEKFLQILFDLQ---------HLKTLKPKEQLP------ISTMNKPDNHLDKNALNQNIKGEIGTTFYIQPPAKESERALSQSNNPQIYGSQQDSASQK--LNGLMSILTNYQKENIPSPPSDNNSQTNPSSNQKHVMISYCHENADFALKLYDELKARNFKLWIDKHDMRANQNLMEAMAQAVENSWAVIICISHCYKNSESCRAEAQYAKDNKKPLIPIIIQEKYRPDGWLGICITGIQYLNFSGKYSSEESMGMLVKQLEQFK--NEQQKSEPTKPQIITDHSNLEQSNENQSNGIKLSDWSNSKVINWFRQIGIKKFAWKSHYTGSELEFLKSIS---GEKLLEFCQSELEIYDLKDIR 659
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000008947.1 (SMESG000008947.1) HSP 1 Score: 270.396 bits (690), Expect = 2.414e-79 Identity = 181/508 (35.63%), Postives = 289/508 (56.89%), Query Frame = 1 Query: 592 LLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKM---FKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEE-EVATKD-HIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXXXXXXXXXXXAGNVQKKIDEIDHI-DPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDLR 2097 +L I+ Y ++ E ++ MKF++LI+D + +IK +LL +A+++ E+ K+ + +SYL +LL K + +++ S EL++GI KLSK DENK++LV+ GILPVL + ++ R ++++L +LW+L F++KN+ +I F + I + + +R P + G L +K D D L T+ TE++ + + Y N+LDGL W L + + E+ E++ ++ H M+SYS SNA IVM IY L +GFK+WIDKYN++++EN+ME+MAQA++NS AV+IF+S YKNS+ CR+EAQYA KP+IPV+V+++Y PDGWLG+CI GLQY DF + F+ ++ LL QI IK K ++ D +P N S NN W +E K W +IG+++I W +Y G ++ FL+++S+ E F I + + K++DLK++R Sbjct: 262 ILNDTITIPYTISINGNPEQIAVLHSMKFVELIQDFLLSPYERIKLNSLLLIAHLSSESHFKLEIIQEKRPEYLSYLTQLLNKYMTDYHGQTRAYSILELARGIEKLSKVDENKRILVKCGILPVLMLLIKNKSMRYKKISLSILWNLAFNKKNRQVINSMFSDIISDFRR----------------------------------DRFPLLYGTL-TKNDKRKTQNDLELRNVTENLNETEKMPRKT--YINVLDGLKWILQDHRNNSKTRDACEDSNEISERETHFMISYSHSNAKIVMDIYQILQKQGFKVWIDKYNINDDENMMEAMAQAVENSIAVIIFLSTKYKNSEYCRSEAQYAFKLNKPLIPVVVEKEYHPDGWLGLCISGLQYFDFTSKTPFKKSMALLTDQISTIKNRRFSKIFEKSDFPKEPSVPSNPSPNN-----WTHEEVKTWLKKIGVRKIKWKANYAGQDIMFLKSLSK---EKFLDICRIDFKMSDLKEMR 724
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000008947.1 (SMESG000008947.1) HSP 1 Score: 270.396 bits (690), Expect = 3.777e-79 Identity = 181/508 (35.63%), Postives = 289/508 (56.89%), Query Frame = 1 Query: 592 LLRICISTLYNTMLHDVNENYTIIKEMKFLDLIKDLMKCEEGKIKRAALLFVAYIADETESKM---FKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLLVEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEE-EVATKD-HIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXXXXXXXXXXXAGNVQKKIDEIDHI-DPVHVKNQSKNNQDITKWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQVPGEVFYQISKNELKITDLKDLR 2097 +L I+ Y ++ E ++ MKF++LI+D + +IK +LL +A+++ E+ K+ + +SYL +LL K + +++ S EL++GI KLSK DENK++LV+ GILPVL + ++ R ++++L +LW+L F++KN+ +I F + I + + +R P + G L +K D D L T+ TE++ + + Y N+LDGL W L + + E+ E++ ++ H M+SYS SNA IVM IY L +GFK+WIDKYN++++EN+ME+MAQA++NS AV+IF+S YKNS+ CR+EAQYA KP+IPV+V+++Y PDGWLG+CI GLQY DF + F+ ++ LL QI IK K ++ D +P N S NN W +E K W +IG+++I W +Y G ++ FL+++S+ E F I + + K++DLK++R Sbjct: 282 ILNDTITIPYTISINGNPEQIAVLHSMKFVELIQDFLLSPYERIKLNSLLLIAHLSSESHFKLEIIQEKRPEYLSYLTQLLNKYMTDYHGQTRAYSILELARGIEKLSKVDENKRILVKCGILPVLMLLIKNKSMRYKKISLSILWNLAFNKKNRQVINSMFSDIISDFRR----------------------------------DRFPLLYGTL-TKNDKRKTQNDLELRNVTENLNETEKMPRKT--YINVLDGLKWILQDHRNNSKTRDACEDSNEISERETHFMISYSHSNAKIVMDIYQILQKQGFKVWIDKYNINDDENMMEAMAQAVENSIAVIIFLSTKYKNSEYCRSEAQYAFKLNKPLIPVVVEKEYHPDGWLGLCISGLQYFDFTSKTPFKKSMALLTDQISTIKNRRFSKIFEKSDFPKEPSVPSNPSPNN-----WTHEEVKTWLKKIGVRKIKWKANYAGQDIMFLKSLSK---EKFLDICRIDFKMSDLKEMR 744
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000035587.1 (SMESG000035587.1) HSP 1 Score: 110.538 bits (275), Expect = 7.078e-25 Identity = 131/516 (25.39%), Postives = 220/516 (42.64%), Query Frame = 1 Query: 607 ISTLYNTMLHDVNENYTIIKEMK--FLDLIKDLMKCEE--GKIKRAALLFVAYIADETESKMFKSDLHSISYLIELLKKSLNTRFSRSQGLSTEELSKGIGKLSKNDENKQLL-VEMGILPVLKMQLEKDDKRNQELALGVLWSLTFDEKNKILIQKEFRNKILELKTKLDKKCQAGLTHDTAGSQVPTLQTHSVESRAKSCNRIPKVIGNLESKKDMNSVSYDDFLCFETQFDENTEEISKNSFNYKNILDGLTWTLTNLEEVKSKKQETEEEEVATKDHIMLSYSWSNADIVMKIYDCLVNKGFKLWIDKYXXXXXXXXXXXXAQAIQNSYAVVIFISQNYKNSDNCRAEAQYAISKKKPVIPVMVQEKYRPDGWLGICIIGLQYCDFAGRYNFEDAXXXXXXXXXXXXAGNVQKKIDEID-HID-PVHV----------KNQSKNNQDIT------KWANERCKNWFDEIGIKRIVWPKHYTGNELDFLRTISQV---PGEVFYQISKNELKI 2076 I+ ++N H +++ + E+K FL+++ + C++ G I +L+ ++Y+ DE E +F + + LI+ +K +N RS+G + +EL G+ +LS NDE K ++ E GI ++ + +++ E L V+ L F+ ++K KL + H G + HS AK C +G+ W L N +++S + E+ D M SYSW+N D V++I L + +WID+ + +E+MA I+NS VVI S YKNS NCR EA+YA KKP+IP++++ KY+P WLGI Y +F+ R N + VQ+ I I H++ PV + KN+S + I W+ E +W D+ GI + + + G + + + + G+ F KNE K+ Sbjct: 157 ITIIHNFASHKLDKINYRVDEIKKTFLNIVN--LNCDDYYGLI---SLVTLSYLIDENEINLFDGHENIVKELIKKIK-LINENKLRSEGFTIKELIHGLRRLSANDEIKTIIDTENGIQVLIDILNSTNNENVIEPTLDVIKQLCFNN---------------DIKIKL-------INHYKIGETLTKFSNHS---NAKICQH----------------------------------------------YNGILWILDN--KLESLPKGNTEKTAIVFDAFM-SYSWANKDKVLEICSILKSYNVNVWIDQ--EEMISSTLEAMATGIENSKVVVIAASTAYKNSSNCRLEAEYAQKIKKPIIPLVMEHKYKPSNWLGILFGTKVYIEFSDRRNANEQ---------------VQQLIKNIKFHLNRPVKLAEKIDLNAGEKNRSNSRTRIVLVDEVKNWSCENVGDWLDKFGIGYL--KEKFIGVDGSMIEVMLDIRINSGDYFNNCLKNEFKM 573 The following BLAST results are available for this feature:
BLAST of TIR domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of TIR domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TIR domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TIR domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30009450 ID=SMED30009450|Name=TIR domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2350bpback to top protein sequence of SMED30009450-orf-1 >SMED30009450-orf-1 ID=SMED30009450-orf-1|Name=SMED30009450-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=701bp MQATSKPQKRKVVGEEIVSKPITRKLTIDEINLKICSEAEDIINKVKSLQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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