Polyadenylation factor subunit 2

Overview
NamePolyadenylation factor subunit 2
Smed IDSMED30009421
Length (bp)2491
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Polyadenylation factor subunit 2 (SMED30009421) t-SNE clustered cells

Violin plots show distribution of expression levels for Polyadenylation factor subunit 2 (SMED30009421) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Polyadenylation factor subunit 2 (SMED30009421) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Polyadenylation factor subunit 2 (SMED30009421) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30009421

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30009421SMESG000053685.1 SmedASXL_011596SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30009421SMESG000053685.1 SmedASXL_011596SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30009421SMESG000053685.1 dd_Smed_v4_5567_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Human
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 543.888 bits (1400), Expect = 1.004e-175
Identity = 264/483 (54.66%), Postives = 332/483 (68.74%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAE---LENIMKMSENEKV-FDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNW-ANKKSTPA 1628
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++ +N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E   L  I  M   E++    +  ++      EIE +    IPGL  G+   M+        + K  + K   ++ IP  FQ  W  NK   PA
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMT----IPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPA 517
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Human
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 299.671 bits (766), Expect = 6.015e-96
Identity = 133/203 (65.52%), Postives = 164/203 (80.79%), Query Frame = 3 
Query:  306 AIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECIST 914
            AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T
Sbjct:    3 AIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLAT 205

HSP 2 Score: 58.151 bits (139), Expect = 7.078e-9
Identity = 39/146 (26.71%), Postives = 63/146 (43.15%), Query Frame = 3 
Query:  687 VSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGD 1124
            V + P  ++ VT ++     +W+  T+  E +L+ H   VR + W      +L+   D    +K W       +     HK    +   +   N F T S D  ++++D      E ++ RGH  DV  V WHP  + L  SGS D
Sbjct:   47 VRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTA--DHGGYVKYWQSNMNN-VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEE-RILRGHGADVKCVDWHPT-KGLVVSGSKD 187

HSP 3 Score: 49.6766 bits (117), Expect = 5.582e-6
Identity = 44/173 (25.43%), Postives = 76/173 (43.93%), Query Frame = 3 
Query:  777 RVLRGHGGEVRC----VAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLF--DIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFA--TKFW 1271
            + +R    +V+C    V W P    L++G+   +    LW+       + +  H S    +  + N  W LTA    Y+K +  ++ N+K    +F+ HK+ +   ++ P  +  FA+ S DG +  W      E   +   H   +  +DWHP   ++ SGS D     KFW
Sbjct:   31 KFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGE--FTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVK----MFQAHKEAIREASFSPT-DNKFATCSDDGTVRIWDFLRCHEERILR-GHGADVKCVDWHPTKGLVVSGSKDSQQPIKFW 195
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Human
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 271.166 bits (692), Expect = 2.246e-84
Identity = 126/197 (63.96%), Postives = 153/197 (77.66%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLR 788
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LR
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILR 241
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Human
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 228.409 bits (581), Expect = 1.860e-67
Identity = 105/166 (63.25%), Postives = 129/166 (77.71%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSF 695
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R   F
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREARF 210
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Human
Match: WDR5B (WD repeat domain 5B [Source:HGNC Symbol;Acc:HGNC:17826])

HSP 1 Score: 105.145 bits (261), Expect = 6.938e-24
Identity = 77/291 (26.46%), Postives = 137/291 (47.08%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFWTRN 1280
             + +V ++P+G  L + ++     +W      +E  L  H+  I  + WS++   LVSA D   +K W       +   + H + V   +F P     ++ S D TV+IW+ +T K  + L  H   V  V ++   SL++SGS D     ++WD  +G+C+ T+    +   + +  + NG + LTA+ D+ +KL+D    +  ++ + GHK  K  I   +         SGS D  +  W + T   V  ++  H +++ S   HP  +++AS +  ND   K W  N
Sbjct:   43 AVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGL--CRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ-GHTDVVISAACHPTENLIASAALENDKTIKLWMSN 329
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Celegans
Match: pfs-2 (Polyadenylation Factor Subunit homolog [Source:UniProtKB/TrEMBL;Acc:U4PN22])

HSP 1 Score: 485.723 bits (1249), Expect = 1.671e-159
Identity = 211/372 (56.72%), Postives = 279/372 (75.00%), Query Frame = 3 
Query:  198 GKRMRKAV--FRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKD-SVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKD 1304
            G+R+RK V   RR +DY S+V    E R W+     R   QPDI+YQ    P     D P++C+  K +RT+ NK KCP+Y+VCW+P+G+RLITG  +GEFTLWNG  FNFETILQAHD+ IRA+KW++NE+WL+SAD  G+VKYWQ NMN+ ++F AHKD ++RG++F P+D KF T S+D T R+WDF  Y EERVLRGHG EVRC+ WHP K L+ +GS+D+QQP+K+WDPK+G C++T+  HKS+   +  NKNGNW LT  +DH +K++DIR +K EM+ +R HKK+VI +AWHP HE LF SG GDG+++YW+V  + E+G +E AHD  IWS+ WHP+GHILA+GSND  TKFW RNRPGD ++D
Sbjct:   69 GRRLRKNVANVRRHVDYVSTVLNHCENRLWQYG-KQRILQQPDILYQQYAVPADSTPDVPVDCILTKFIRTAMNKVKCPVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMK-EMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDTVED 438
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Celegans
Match: pfs-2 (Polyadenylation Factor Subunit homolog [Source:UniProtKB/TrEMBL;Acc:U4PN22])

HSP 1 Score: 309.686 bits (792), Expect = 8.494e-95
Identity = 129/223 (57.85%), Postives = 173/223 (77.58%), Query Frame = 3 
Query:  639 MNDVNVFQAHKD-SVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKD 1304
            MN+ ++F AHKD ++RG++F P+D KF T S+D T R+WDF  Y EERVLRGHG EVRC+ WHP K L+ +GS+D+QQP+K+WDPK+G C++T+  HKS+   +  NKNGNW LT  +DH +K++DIR +K EM+ +R HKK+VI +AWHP HE LF SG GDG+++YW+V  + E+G +E AHD  IWS+ WHP+GHILA+GSND  TKFW RNRPGD ++D
Sbjct:    1 MNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMK-EMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDTVED 222

HSP 2 Score: 56.9954 bits (136), Expect = 4.751e-8
Identity = 37/157 (23.57%), Postives = 73/157 (46.50%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGE--FTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQAN-MNDVNVFQAHKDSVRGVSFCP-SDKKFVTCSNDNTVRIWDFQTYKEERVLR-GHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            +  + W P    + TG+   +    +W+  + +    LQ H + + A++++ N  WL++      VK +    M ++  ++AHK  V  +++ P  +  FV+   D ++  W     KE  +L   H   +  + WHP+  +L +GS D+    K W
Sbjct:   57 VRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNN--TKFW 211
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Celegans
Match: wdr-5.3 (WD repeat-containing protein wdr-5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q23256])

HSP 1 Score: 110.153 bits (274), Expect = 5.844e-25
Identity = 76/290 (26.21%), Postives = 130/290 (44.83%), Query Frame = 3 
Query:  456 GRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMY-VHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFA-----------SGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFWTRN 1280
            G+ L TG++  +  +WN +   +   L +H   I    WS+N +++ SA D   VK +       +   + H + V   SF P      +   D TVR+WDF+T    + +  H   +  ++++   + + + S D    +++WD  +G C+ T+     +  T +  + NG + L+A  D  +KL+D +  K  ++ + GHK              LFA           SGS DG +L W + T   V  +E  H   + + D HP  +I+ASG    D   + W RN
Sbjct:  225 GKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGC--IRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAK-PLKYYNGHKNK---------KYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILE-GHTTPVLATDSHPTLNIIASGGLEPDNVIRIWRRN 501

HSP 2 Score: 53.9138 bits (128), Expect = 3.381e-7
Identity = 34/162 (20.99%), Postives = 71/162 (43.83%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQAN-MNDVNVFQAHKDSVRGVSFC-------PSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            PI ++ +  DG  + T +  G   +W+  + +  +T++      +  + +S N ++L+SA     +K W       +  +  HK+      +C       P  K  ++ S D  + +W  QT +  ++L GH   V     HP  +++ SG  +    +++W
Sbjct:  341 PITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNK----KYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIW 498
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Celegans
Match: wdr-5.2 (WD repeat-containing protein wdr-5.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93847])

HSP 1 Score: 101.293 bits (251), Expect = 1.363e-22
Identity = 78/300 (26.00%), Postives = 135/300 (45.00%), Query Frame = 3 
Query:  390 KHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHK-STCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFW 1271
            K V    N +K  I  + ++PDGR + +G++     +W  + F +E  L  H   I    WS++ + +VS  D   VK +  +    V   + H + V    F PS     + S D T+RIW  +       + GH   V  V ++   + L SGS D    +++WD   G C+ T+   +    T +  + NG + L ++ ++ +KL+D + L+  ++ + GH+  K  +   +         SGS D  +  W + T  E+    D H+  +   D HP  +I+AS +   D   K W
Sbjct:   97 KLVAEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWR-MDFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGI--VRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRV-LKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQT-REILQTLDGHNTAVMCTDCHPGQNIIASAALEPDMRIKIW 391

HSP 2 Score: 62.7734 bits (151), Expect = 5.403e-10
Identity = 44/174 (25.29%), Postives = 89/174 (51.15%), Query Frame = 3 
Query:  384 CAKHVRT--STNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVS--FCPSDKK-FVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            CA++  T  S   ++ P+ +VC+  DG  L +G+  G   +W+  T    +T++      I  +K+S N +++++++ +  +K W    +  +  +  H++S   V+  F  +  K  V+ S D+ V IW+ QT +  + L GH   V C   HP ++++ S + +    +K+W
Sbjct:  218 CARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCHPGQNIIASAALEPDMRIKIW 391

HSP 3 Score: 59.6918 bits (143), Expect = 4.167e-9
Identity = 42/200 (21.00%), Postives = 87/200 (43.50%), Query Frame = 3 
Query:  384 CAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDV--NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWH---PIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKST--CTDIGINKN 962
            C K ++  TN     ++  C+ P G  + +G+      +W     N    +  H+  + ++ ++ +  +L S    G V+ W +        +       +  V F P+ K  +  + +NT+++WD+Q  +  +   GH     CVA +        ++SGS+D +  + +W+ +  E + T+  H +   CTD    +N
Sbjct:  182 CVKTLKGHTNY----VFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHK--VYIWNLQTREILQTLDGHNTAVMCTDCHPGQN 375
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Celegans
Match: wdr-5.1 (WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963])

HSP 1 Score: 96.6709 bits (239), Expect = 3.296e-21
Identity = 76/277 (27.44%), Postives = 130/277 (46.93%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVN-VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS 1247
            I +  ++P G+ L T ++     +WN      E  L  H   +  + WS++   +VSA D   +K ++   + +    + H + V   +F P     V+ S D +VRIWD +T    + L  H   V  V+++   SL+ SGS D    +++WD   G+CI T+   ++     +  + NG + L ++ D  +KL+D    KT  Q + GH+  K  I   +         SGS D  +  W + T   V  +E  H   + + D HP+ +I+ASG+
Sbjct:   90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL--VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ-YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLE-GHTQPVLASDCHPVQNIIASGA 362

HSP 2 Score: 86.2705 bits (212), Expect = 1.167e-17
Identity = 53/210 (25.24%), Postives = 99/210 (47.14%), Query Frame = 3 
Query:  516 FNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQAN-MNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            +     L+ H   I + K+S   ++L ++     VK W  + M        HK  V  +++    +  V+ S+D T++I++  T +  + L+GH   V C  ++P  SL++SGS D  + +++WD K G CI T+  H    + +  N++G+   + S D  ++++D  N +    +       V  V + P  + + AS   D  L  W
Sbjct:   77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD--ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL-DSTLKLW 283

HSP 3 Score: 66.6254 bits (161), Expect = 2.509e-11
Identity = 51/216 (23.61%), Postives = 91/216 (42.13%), Query Frame = 3 
Query:  654 VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLK 1301
              + H  S+    F P  K   T S D TV+IW+      ER L GH   V  +AW      ++S S D  + LK+++        T+  H +       N   +  ++ S D  ++++D++     ++    H   V  V+++    +L ASGS DG +  W       +  + D  +  +  + + P G  + + + D   K W  ++ G  LK
Sbjct:   82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDD--KTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC-IKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK-GKTLK 292

HSP 4 Score: 51.2174 bits (121), Expect = 1.899e-6
Identity = 33/158 (20.89%), Postives = 78/158 (49.37%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGV--SFCPSDKK-FVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            P+ AV +  DG  + +G+  G   +W+       +T++   +  +  +K+S N +++++++    +K W  +    +  +  H++S   +  +F  +  K  ++ S D  + IW+ QT +  + L GH   V     HP+++++ SG+ +    + +W
Sbjct:  215 PVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Fly
Match: Wdr33 (gene:FBgn0046222 transcript:FBtr0078713)

HSP 1 Score: 526.168 bits (1354), Expect = 2.526e-175
Identity = 247/473 (52.22%), Postives = 333/473 (70.40%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKR+RK+V R+T+DYN+S+   +E R ++R Y  R A+QPD +Y   + PP+ Y DNP N V  + V+T+TNK +CPI+ + WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD  +R M WS+N+ W+V+ D  G+VKYWQ+NMN+V ++QAHK+++RG+SF P+D KFV+ S+D T+RIWDF   +EERVLRGHG +V+CV WHP K +++SGSKD+QQP+K+WDPK+G  ++T++ HKST  D+  N NGNW +TAS+DH +KLFDIRNL+ E+QVFRGHKK+   V+WHP HE LF SG  DG++L+W VGTD E+G VE AHD+I+W+L WHP+GHIL SGSND   KFWTRNRPGD+++D      L A              ++  + E E   D  I  +    + E  +S  +D   + GL+ +   A  + D E K        S+ IP+ FQ NWA  +
Sbjct:   72 GKRLRKSVMRKTVDYNASIIKALENRLYQRDYRDRLALQPDSIYVPHMLPPSAYLDNPSNAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPA--------------SLAALDECE-YDDAIIPGMGPEDRVEFTESLTADKGFIPGLDLDPSKAINDRDREKKV-----PYSKPIPRNFQVNWAGPR 524
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Fly
Match: Wdr33 (gene:FBgn0046222 transcript:FBtr0078714)

HSP 1 Score: 526.168 bits (1354), Expect = 2.526e-175
Identity = 247/473 (52.22%), Postives = 333/473 (70.40%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKR+RK+V R+T+DYN+S+   +E R ++R Y  R A+QPD +Y   + PP+ Y DNP N V  + V+T+TNK +CPI+ + WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD  +R M WS+N+ W+V+ D  G+VKYWQ+NMN+V ++QAHK+++RG+SF P+D KFV+ S+D T+RIWDF   +EERVLRGHG +V+CV WHP K +++SGSKD+QQP+K+WDPK+G  ++T++ HKST  D+  N NGNW +TAS+DH +KLFDIRNL+ E+QVFRGHKK+   V+WHP HE LF SG  DG++L+W VGTD E+G VE AHD+I+W+L WHP+GHIL SGSND   KFWTRNRPGD+++D      L A              ++  + E E   D  I  +    + E  +S  +D   + GL+ +   A  + D E K        S+ IP+ FQ NWA  +
Sbjct:   72 GKRLRKSVMRKTVDYNASIIKALENRLYQRDYRDRLALQPDSIYVPHMLPPSAYLDNPSNAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPA--------------SLAALDECE-YDDAIIPGMGPEDRVEFTESLTADKGFIPGLDLDPSKAINDRDREKKV-----PYSKPIPRNFQVNWAGPR 524
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Fly
Match: wds (gene:FBgn0040066 transcript:FBtr0308566)

HSP 1 Score: 101.679 bits (252), Expect = 7.493e-23
Identity = 76/287 (26.48%), Postives = 132/287 (45.99%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFW 1271
            + AV ++P+G  L + ++     +W      FE  +  H   I  + WS++   LVS  D   +K W+ +    +   + H + V   +F P     V+ S D +VRIWD +T K  + L  H   V  V ++   SL++S S D     ++WD  +G+C+ T+    +   + +  + NG + L A+ D+ +KL+D    K  ++ + GHK  K  I   +         SGS D  +  W + +   V  ++  H + +     HP  +I+AS +  ND   K W
Sbjct:   75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL--CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ-GHTDTVLCTACHPTENIIASAALENDKTIKLW 357

HSP 2 Score: 77.411 bits (189), Expect = 9.007e-15
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGG-EVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGIN---KNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGS 1118
            +K  I  V W+ D R L++G+      +W   T      L+ H  ++    ++     +VS      V+ W       +    AH D V  V F       V+ S D   RIWD  + +  + L       V  V + P    +L+ + D+   LKLWD   G+C+ T   HK+    I  N     G W ++ S+D+ + ++++++ K  +Q  +GH   V+  A HP  E + AS +
Sbjct:  113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT--LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS-KEVVQKLQGHTDTVLCTACHPT-ENIIASAA 347

HSP 3 Score: 59.3066 bits (142), Expect = 5.868e-9
Identity = 38/158 (24.05%), Postives = 83/158 (52.53%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGV--SFCPSDKKF-VTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            P+ AV +  DG  +++ +  G   +W+  +    +T++   +  +  +K+S N +++++A     +K W  +    +  +  HK+    +  +F  +  K+ V+ S DN V IW+ Q+ +  + L+GH   V C A HP ++++ S + ++ + +KLW
Sbjct:  200 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Fly
Match: wds (gene:FBgn0040066 transcript:FBtr0070438)

HSP 1 Score: 101.679 bits (252), Expect = 7.493e-23
Identity = 76/287 (26.48%), Postives = 132/287 (45.99%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFW 1271
            + AV ++P+G  L + ++     +W      FE  +  H   I  + WS++   LVS  D   +K W+ +    +   + H + V   +F P     V+ S D +VRIWD +T K  + L  H   V  V ++   SL++S S D     ++WD  +G+C+ T+    +   + +  + NG + L A+ D+ +KL+D    K  ++ + GHK  K  I   +         SGS D  +  W + +   V  ++  H + +     HP  +I+AS +  ND   K W
Sbjct:   75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL--CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ-GHTDTVLCTACHPTENIIASAALENDKTIKLW 357

HSP 2 Score: 77.411 bits (189), Expect = 9.007e-15
Identity = 62/239 (25.94%), Postives = 104/239 (43.51%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGG-EVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGIN---KNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGS 1118
            +K  I  V W+ D R L++G+      +W   T      L+ H  ++    ++     +VS      V+ W       +    AH D V  V F       V+ S D   RIWD  + +  + L       V  V + P    +L+ + D+   LKLWD   G+C+ T   HK+    I  N     G W ++ S+D+ + ++++++ K  +Q  +GH   V+  A HP  E + AS +
Sbjct:  113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT--LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS-KEVVQKLQGHTDTVLCTACHPT-ENIIASAA 347

HSP 3 Score: 59.3066 bits (142), Expect = 5.868e-9
Identity = 38/158 (24.05%), Postives = 83/158 (52.53%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGV--SFCPSDKKF-VTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            P+ AV +  DG  +++ +  G   +W+  +    +T++   +  +  +K+S N +++++A     +K W  +    +  +  HK+    +  +F  +  K+ V+ S DN V IW+ Q+ +  + L+GH   V C A HP ++++ S + ++ + +KLW
Sbjct:  200 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Fly
Match: Lis-1 (gene:FBgn0015754 transcript:FBtr0087241)

HSP 1 Score: 90.8929 bits (224), Expect = 5.150e-19
Identity = 72/255 (28.24%), Postives = 120/255 (47.06%), Query Frame = 3 
Query:  591 LVSADDSGFVKYWQANMNDVN-VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDF-QTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIK--LFDIRNLKTEMQVFRGHKKDVIRVAW------------------HPYHETLF-ASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW-TRNR 1283
            +VSA +   ++ W     +     + H DSV+ V+F    K   +CS D ++++WDF Q+Y+  + + GH   V  VA+ P    +LS S+D  + +K+W+   G C+ T   H+     + ++  G+ F T S D  I+  L + ++ K E+   R H+  V  +AW                    +H+  F ASGS D  +  W V   + +  +   HDN +  L +HP G  L S S+D   + W  RN+
Sbjct:  123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRD--RTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL---RDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTL-SGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371

HSP 2 Score: 87.4261 bits (215), Expect = 8.207e-18
Identity = 67/226 (29.65%), Postives = 106/226 (46.90%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWD-PKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSL--------------------DWHPMGHILASGSNDFATKFW 1271
               H+ S+  V F P     V+ S D T+RIWDF+T + ER L+GH   V+ VA+     LL S S D    +KLWD  ++ ECI TM+ H    + +     G++ L+AS+D  IK++++      ++ + GH++ V  V  H    ++FA+ S D  +  WL  +      + D H++ +  +                      H  G  LASGS D   + W
Sbjct:  104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSAD--LSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYC-VKTYTGHREWVRMVRVH-IEGSIFATCSNDQTIRVWLTNSKDCKVELRD-HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIW 324

HSP 3 Score: 82.0333 bits (201), Expect = 4.352e-16
Identity = 65/258 (25.19%), Postives = 116/258 (44.96%), Query Frame = 3 
Query:  438 VCWTPDGRRLITGASSGEFTLWNGLTFNFETI--LQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAW--------------------HPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            V +   G+ L + ++     LW+    ++E I  +  HD ++ ++ +    ++++SA     +K W+ A    V  +  H++ VR V        F TCSND T+R+W   +   +  LR H   V C+AW                    H     L SGS+D  + +++WD   G C+ T+  H +    +  +  G + ++AS D  I+++D+RN K  M+    H+     + +H  H  +  SGS D  +  W
Sbjct:  156 VAFDAQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRD--KTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN-KRCMKTLYAHQHFCTSIDFHKAHPYVI-SGSVDQTVKVW 408

HSP 4 Score: 68.9366 bits (167), Expect = 6.703e-12
Identity = 48/170 (28.24%), Postives = 79/170 (46.47%), Query Frame = 3 
Query:  771 EERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
            E+  L GH   +  V +HPI +L++S S+D+   +++WD + GE   ++  H  +  D+  +  G    + S D  IKL+D +     ++   GH  +V  VA+ P  + +  S S D  +  W V T   V      H   +  +  H  G I A+ SND   + W  N
Sbjct:  100 EKFSLTGHRASITRVIFHPIFALMVSASEDA--TIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVATGYCVKTYT-GHREWVRMVRVHIEGSIFATCSNDQTIRVWLTN 265

HSP 5 Score: 67.0106 bits (162), Expect = 2.805e-11
Identity = 49/218 (22.48%), Postives = 92/218 (42.20%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNV-FQAHKDSVRGVSFCP------------SDKK--------FVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIR 1019
            + +V + P G  +++ +      +W   T         H   +R ++         +  +   ++ W  N  D  V  + H+ +V  +++ P            +D K          + S D T+RIWD         L GH   VR +A+HP    L+S S D  + +++WD +   C+ T+Y H+  CT I  +K   + ++ S D  +K+++ R
Sbjct:  196 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDD--KTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Zebrafish
Match: wdr33 (WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3])

HSP 1 Score: 535.413 bits (1378), Expect = 3.966e-175
Identity = 264/494 (53.44%), Postives = 333/494 (67.41%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI-----MKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEM----ENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKSTPAVYANEPP 1649
            GKRMRKAV R+TIDYN SV   +E R W+R +    A+QPD    + L PP     NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE +FASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D +  +I     M + E  K    +  +    + AE E S    IPGL  G+   M    + APT++             ++ IP  FQ  WA  K  P + A E P
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIRHLENRLWQRDHRDFRAVQPDAGCYNELVPPVGMISNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGMFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDMDTNSIAAIPGMGIPEQLKAA-MEQEQSGKDMVAEPEMS----IPGLDWGMEEVMLRDQKKAPTKKV----------PYAKPIPAQFQQAWAENK-VPVMPAGEVP 522
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Zebrafish
Match: wdr33 (WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3])

HSP 1 Score: 531.946 bits (1369), Expect = 1.203e-173
Identity = 264/494 (53.44%), Postives = 333/494 (67.41%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI-----MKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEM----ENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKSTPAVYANEPP 1649
            GKRMRKAV R+TIDYN SV   +E R W+R +    A+QPD    + L PP     NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE +FASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D +  +I     M + E  K    +  +    + AE E S    IPGL  G+   M    + APT++             ++ IP  FQ  WA  K  P + A E P
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIRHLENRLWQRDHRDFRAVQPDAGCYNELVPPVGMISNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGMFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDMDTNSIAAIPGMGIPEQLKA-AMEQEQSGKDMVAEPEMS----IPGLDWGMEEVMLRDQKKAPTKKV----------PYAKPIPAQFQQAWAENK-VPVMPAGEVP 522
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Zebrafish
Match: wdr33 (WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3])

HSP 1 Score: 220.705 bits (561), Expect = 2.915e-65
Identity = 102/162 (62.96%), Postives = 126/162 (77.78%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVR 683
            GKRMRKAV R+TIDYN SV   +E R W+R +    A+QPD    + L PP     NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIRHLENRLWQRDHRDFRAVQPDAGCYNELVPPVGMISNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIR 206
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Zebrafish
Match: wdr5 (WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082])

HSP 1 Score: 103.219 bits (256), Expect = 2.094e-23
Identity = 78/287 (27.18%), Postives = 133/287 (46.34%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFW 1271
            + +V ++P G  L + ++     +W      FE  +  H   I  + WS++   LVSA D   +K W  +    +   + H + V   +F P     V+ S D +VRIWD +T K  + L  H   V  V ++   SL++S S D     ++WD  +G+C+ T+    +   + +  + NG + L A+ D+ +KL+D    K  ++ + GHK  K  I   +         SGS D  +  W + T   V  ++  H +++ S   HP  +I+AS +  ND   K W
Sbjct:   48 VSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL--CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQ-GHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 2 Score: 72.0182 bits (175), Expect = 5.707e-13
Identity = 60/239 (25.10%), Postives = 102/239 (42.68%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGG-EVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGIN---KNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGS 1118
            +K  I  V W+ D   L++ +      +W+  +      L+ H  ++    ++     +VS      V+ W       +    AH D V  V F       V+ S D   RIWD  + +  + L       V  V + P    +L+ + D+   LKLWD   G+C+ T   HK+    I  N     G W ++ S+D+ + +++++  K  +Q  +GH   VI  A HP  E + AS +
Sbjct:   86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT--LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQT-KEIVQKLQGHTDVVISTACHP-TENIIASAA 320

HSP 3 Score: 55.0694 bits (131), Expect = 1.789e-7
Identity = 38/158 (24.05%), Postives = 82/158 (51.90%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGV--SFCPSDKKF-VTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            P+ AV +  DG  +++ +  G   +W+  +    +T++   +  +  +K+S N +++++A     +K W  +    +  +  HK+    +  +F  +  K+ V+ S DN V IW+ QT +  + L+GH   V   A HP ++++ S + ++ + +KLW
Sbjct:  173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Zebrafish
Match: pafah1b1b (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:NCBI gene;Acc:394247])

HSP 1 Score: 98.9821 bits (245), Expect = 1.562e-21
Identity = 64/247 (25.91%), Postives = 114/247 (46.15%), Query Frame = 3 
Query:  591 LVSADDSGFVKYWQANMNDVN-VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHP--YHETL-----------------FASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            +VSA +   +K W     D     + H DSV+ +SF  + K   +CS D T+++WDFQ ++  R + GH   V  VA  P    ++S S+D  + +K+W+   G C+ T   H+     +  N++G    + S D  ++++ +   + + +  R H+  V  ++W P   H T+                   SGS D  +  W + T M +  +   HDN +  + +HP G  + S ++D   + W
Sbjct:  123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD--KTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAE-LREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLV-GHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365

HSP 2 Score: 94.3597 bits (233), Expect = 5.676e-20
Identity = 65/225 (28.89%), Postives = 104/225 (46.22%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPM--------------------GHILASGSNDFATKFW 1271
               H+  V  V F P     V+ S D T+++WD++    ER L+GH   V+ +++     LL S S D    +KLWD +  ECI TM+ H    + + I  NG+  ++AS+D  +K++++      ++ F GH ++ +R+       TL AS S D  +  W+V T  E  A    H++++  + W P                     G  L SGS D   K W
Sbjct:  104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSAD--MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC-VKTFTGH-REWVRMVRPNQDGTLLASCSNDQTVRVWVVATK-ECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMW 323

HSP 3 Score: 86.2705 bits (212), Expect = 2.665e-17
Identity = 66/253 (26.09%), Postives = 112/253 (44.27%), Query Frame = 3 
Query:  456 GRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAW-----HPIKS---------------LLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWH---PYHETLFASGSGDGALLYW 1142
            G+ L + ++     LW+   F     +  HD ++ ++    N + +VSA     +K W+ A    V  F  H++ VR V          +CSND TVR+W   T + +  LR H   V C++W     HP  S                LLSGS+D  + +K+WD   G C+ T+  H +    +  +  G + ++ + D  ++++D +N K  M+    H+  V  + +H   PY      +GS D  +  W
Sbjct:  162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRD--KTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKN-KRCMKTLSAHEHFVTSLDFHKTSPY----VVTGSVDQTVKVW 407

HSP 4 Score: 77.0258 bits (188), Expect = 2.118e-14
Identity = 72/332 (21.69%), Postives = 130/332 (39.16%), Query Frame = 3 
Query:  339 LTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIG--------------------INKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            L  P   + +P   +     + + + ++ P+  V + P    +++ +      +W+    +FE  L+ H   ++ + +    + L S      +K W       +     H  +V  V+  P+    V+ S D T+++W+  T    +   GH   VR V  +   +LL S S D  Q +++W     EC + +  H+     I                       K G + L+ S+D  IK++DI      M +  GH   V  V +HP       S + D  L  W       +  +  AH++ + SLD+H     + +GS D   K W
Sbjct:   81 LGGPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSND--QTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLV-GHDNWVRGVLFHPGGR-FVVSCADDKTLRIWDYKNKRCMKTL-SAHEHFVTSLDFHKTSPYVVTGSVDQTVKVW 407

HSP 5 Score: 52.373 bits (124), Expect = 1.622e-6
Identity = 39/168 (23.21%), Postives = 74/168 (44.05%), Query Frame = 3 
Query:  453 DGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKW--------------SNNEE------WLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPK 893
            DG  L + ++     +W   T   +  L+ H+  +  + W              S N++      +L+S      +K W  +    +     H + VRGV F P  +  V+C++D T+RIWD++  +  + L  H   V  + +H     +++GS D  Q +K+W+ +
Sbjct:  245 DGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTSPYVVTGSVD--QTVKVWECR 410
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Xenopus
Match: ntf4 (neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492])

HSP 1 Score: 540.036 bits (1390), Expect = 1.524e-177
Identity = 257/474 (54.22%), Postives = 324/474 (68.35%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NP+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD SG+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K LL+SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNL+ E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E  N+  +          +      +  E   S +  IPGL  G+   M+        + K  + K   ++ IP  FQ  W   K
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMINNPLNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKNGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLREELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDIEPNNLAVIPGMGIPEQLKMAMEQEQMSKEESSSVEMTIPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNK 512
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Xenopus
Match: ntf4 (neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492])

HSP 1 Score: 536.954 bits (1382), Expect = 2.098e-176
Identity = 257/474 (54.22%), Postives = 324/474 (68.35%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NP+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD SG+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K LL+SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNL+ E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E  N+  +          +      +  E   S +  IPGL  G+   M+        + K  + K   ++ IP  FQ  W   K
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMINNPLNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKNGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLREELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDIEPNNLAVIPGMGIPEQLKMAMEQEQMSKEESSSVEMTIPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNK 512
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Xenopus
Match: ntf4 (neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492])

HSP 1 Score: 539.65 bits (1389), Expect = 6.313e-175
Identity = 260/479 (54.28%), Postives = 331/479 (69.10%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI-----MKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NP+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD SG+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K LL+SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNL+ E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E  N+     M + E  K+   +  ++S    + +E +    IPGL  G+   M+        + K  + K   ++ IP  FQ  W   K
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMINNPLNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKNGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLREELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDIEPNNLAVIPGMGIPEQLKMA-MEQEQMSKEESSSVEMT----IPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNK 512
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Xenopus
Match: ntf4 (neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492])

HSP 1 Score: 543.502 bits (1399), Expect = 1.838e-173
Identity = 260/479 (54.28%), Postives = 331/479 (69.10%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI-----MKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NP+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD SG+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K LL+SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNL+ E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E  N+     M + E  K+   +  ++S    + +E +    IPGL  G+   M+        + K  + K   ++ IP  FQ  W   K
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMINNPLNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKNGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLREELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDIEPNNLAVIPGMGIPEQLKMA-MEQEQMSKEESSSVEMT----IPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNK 512
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Xenopus
Match: ntf4 (neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492])

HSP 1 Score: 273.863 bits (699), Expect = 1.388e-85
Identity = 126/198 (63.64%), Postives = 154/198 (77.78%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRG 791
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NP+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD SG+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LR 
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMINNPLNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRA 242
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Mouse
Match: Wdr33 (WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570])

HSP 1 Score: 544.273 bits (1401), Expect = 3.341e-176
Identity = 264/483 (54.66%), Postives = 333/483 (68.94%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAE---LENIMKMSENEKV-FDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNW-ANKKSTPA 1628
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++ +N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E   L  I  M   E++    +  ++     +EIE +    IPGL  G+   M+        + K  + K   ++ IP  FQ  W  NK   PA
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESSEIEMT----IPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPA 517
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Mouse
Match: Wdr33 (WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570])

HSP 1 Score: 276.559 bits (706), Expect = 1.398e-86
Identity = 127/198 (64.14%), Postives = 154/198 (77.78%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRG 791
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRG
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRG 242
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Mouse
Match: Wdr33 (WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570])

HSP 1 Score: 271.552 bits (693), Expect = 1.865e-84
Identity = 126/197 (63.96%), Postives = 153/197 (77.66%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLR 788
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LR
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILR 241
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Mouse
Match: Wdr33 (WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570])

HSP 1 Score: 228.409 bits (581), Expect = 8.393e-68
Identity = 105/166 (63.25%), Postives = 129/166 (77.71%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSF 695
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R   F
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREARF 210
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Mouse
Match: Wdr5b (WD repeat domain 5B [Source:MGI Symbol;Acc:MGI:1916794])

HSP 1 Score: 107.071 bits (266), Expect = 1.158e-24
Identity = 79/301 (26.25%), Postives = 141/301 (46.84%), Query Frame = 3 
Query:  396 VRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFWTRN 1280
            +R +   +   I +V ++P+G  L + A+     +W     N +  L  H   I  + WS++   LVSA D   +K W       +   + H D V    F P     V+ S D +V+IW+ +T K  + L  H   +  V ++   SL++SGS D     ++WD  +G+C+ T+    +   + +  + NG + LTA+ D+ +KL+D    +  ++ + GHK  K  +  ++         SGS D  +  W + T   V  ++  H +++ S   HP  +I+AS +  ND   K W+ +
Sbjct:   31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGL--CRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQ-GHTDVVISAACHPTKNIIASAALENDKTIKVWSSD 327
[Close]
BLAST of Polyadenylation factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q8K4P0|WDR33_MOUSE (pre-mRNA 3' end processing protein WDR33 OS=Mus musculus OX=10090 GN=Wdr33 PE=1 SV=1)

HSP 1 Score: 544.273 bits (1401), Expect = 2.337e-175
Identity = 264/483 (54.66%), Postives = 333/483 (68.94%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAE---LENIMKMSENEKV-FDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNW-ANKKSTPA 1628
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++ +N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E   L  I  M   E++    +  ++     +EIE +    IPGL  G+   M+        + K  + K   ++ IP  FQ  W  NK   PA
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESSEIEMT----IPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPA 517
[Close]
BLAST of Polyadenylation factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q9C0J8|WDR33_HUMAN (pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens OX=9606 GN=WDR33 PE=1 SV=2)

HSP 1 Score: 543.888 bits (1400), Expect = 4.822e-175
Identity = 264/483 (54.66%), Postives = 332/483 (68.74%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAE---LENIMKMSENEKV-FDFDIHKLSSTIKAEIEKSEKSDIPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNW-ANKKSTPA 1628
            GKRMRKAV R+TIDYN SV  ++E R W+R      AIQPD  Y + L PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++ +N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W VG + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E   L  I  M   E++    +  ++      EIE +    IPGL  G+   M+        + K  + K   ++ IP  FQ  W  NK   PA
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMT----IPGLDWGMEEVMQK------DQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPA 517
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BLAST of Polyadenylation factor subunit 2 vs. UniProt/SwissProt
Match: sp|U4PCM1|WDR33_CAEEL (pre-mRNA 3' end processing protein pfs-2 OS=Caenorhabditis elegans OX=6239 GN=pfs-2 PE=1 SV=1)

HSP 1 Score: 485.723 bits (1249), Expect = 2.125e-158
Identity = 211/372 (56.72%), Postives = 279/372 (75.00%), Query Frame = 3 
Query:  198 GKRMRKAV--FRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKD-SVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKD 1304
            G+R+RK V   RR +DY S+V    E R W+     R   QPDI+YQ    P     D P++C+  K +RT+ NK KCP+Y+VCW+P+G+RLITG  +GEFTLWNG  FNFETILQAHD+ IRA+KW++NE+WL+SAD  G+VKYWQ NMN+ ++F AHKD ++RG++F P+D KF T S+D T R+WDF  Y EERVLRGHG EVRC+ WHP K L+ +GS+D+QQP+K+WDPK+G C++T+  HKS+   +  NKNGNW LT  +DH +K++DIR +K EM+ +R HKK+VI +AWHP HE LF SG GDG+++YW+V  + E+G +E AHD  IWS+ WHP+GHILA+GSND  TKFW RNRPGD ++D
Sbjct:   69 GRRLRKNVANVRRHVDYVSTVLNHCENRLWQYG-KQRILQQPDILYQQYAVPADSTPDVPVDCILTKFIRTAMNKVKCPVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMK-EMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDTVED 438
[Close]
BLAST of Polyadenylation factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q6NLV4|FY_ARATH (Flowering time control protein FY OS=Arabidopsis thaliana OX=3702 GN=FY PE=1 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 1.457e-132
Identity = 197/375 (52.53%), Postives = 254/375 (67.73%), Query Frame = 3 
Query:  201 KRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQ-AHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEK 1322
            KRMRK   RR +DY S+V  +I+ RTW+R    R  +QP       + P   Y DNP     AK V  S NKN+C I  V WTP GRRLITG+ SGEFTLWNG +FNFE ILQAHD  IR+M WS+NE ++VS DD G +KYWQ NMN+V   + AHK+S+R +SFC +D KF +CS+D TV++WDF    +E  L GHG +V+ V WHP KSLL+SG KD  Q +KLWD ++G  + +++ HK+    +  N+NGNW LTASKD  IKL+DIR +K E+Q FRGH KDV  +AWHP HE  F SGS DG++ +W+VG +     + +AHDN +W L WHP+G++L SGSND  TKFW RNRP D  +D L + +
Sbjct:   50 KRMRKHTQRRAVDYTSTVVRYIQARTWQRDSRDRTTLQPTPAAAVDMLPTVAYSDNPSTSFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGHGWDVKSVDWHPTKSLLVSGGKD--QLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMK-ELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADNPRDVLMQNQ 421
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BLAST of Polyadenylation factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q7RY68|PFS2_NEUCR (Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=paa-1 PE=3 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 4.238e-101
Identity = 163/387 (42.12%), Postives = 239/387 (61.76%), Query Frame = 3 
Query:  225 RRTIDYNSSVALFIEQRTWKRKYSSRCAIQ-PDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINK-NGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLV--------GTDMEVGAVED--------------------AHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDV 1295
            R   DY +SV  ++  R  + + S    ++ P   Y   + PP     NP + V ++H+ +S NK K PI  V WTP+GRRL+T +SSGEFTLWNG  FNFETI+QAHD+ IRA+ +S++++WLVSAD  G +KYWQ N N+V   + H D +R ++F P+D KFVT S+D T++++DF     +  L GHG + +   WHP + L++SGSKD    +KLWDP+ G C++T++ HK+T T     +  GN   T+++D   ++FD+R ++ ++ + RGH+KD+  + WHP H  L ++G  DG+L ++L+        G+ M + AV D                    AHD  IWSLDWHP+GHILASGSND  T+FW+R RPG+ 
Sbjct:   30 RPVTDYGASVVHYMRHRQPRYRGSYAGEVERPSPSYIVDMLPPYARVTNPADSVPSRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIRALVYSHSDDWLVSADHDGIIKYWQPNFNNVESIRGHTDPIRDLAFSPNDTKFVTASDDQTLKVFDFAGGSTDMTLTGHGWDAKSCDWHPSRGLIVSGSKDHL--VKLWDPRTGRCLTTLHGHKNTITKTLFERVQGNCLATSARDQTARVFDLRMMR-DIALLRGHEKDISTLTWHPVHSNLLSTGGSDGSLFHYLLDEPNTAPDGSVMPIPAVYDTADPSSAPAQPIYPAHKIPYAHDFAIWSLDWHPLGHILASGSNDRITRFWSRARPGEA 413
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BLAST of Polyadenylation factor subunit 2 vs. TrEMBL
Match: A0A183MSN4 (WD_REPEATS_REGION domain-containing protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS19059 PE=4 SV=1)

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 293/494 (59.31%), Postives = 366/494 (74.09%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKV---FDFDIHKLSSTIKAEIEKSEKSD---------------IPGLS-GLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKST 1622
             ++ RKAVFRRTIDYN+S   +++ R W  +   R  +QPD ++   L PP  Y D+PMNCV +K VRTSTNKNKCPIY VCWTP+GRRLITGA SGEFTLWNGLTFNFETILQAH++ IR MKWS+NEEWL++AD SG+VKYWQANMN+V ++QAHK+ +RGVSFCP D KFVTCS+D+TVRIWDF    EERVLRGHG +VR VAWHP+ SL++SGSKD+QQP+KLWDPK GE +ST+YVHK+TCTD+  N NGNWFLTAS+DH IKLFD+RNLK+E+Q FRGHK+DV+RVAWHP+HE+LF SGS DGA+ YWL GTD E+GAV++AH+++IWSL WHP GHIL SG+NDFATKFWTRNRPGDVLKD +       +   V+      L N     + E V   F+ D+ KL +       + +  D               IPGL+ G   ++    T++  E +++KL+G  SRTIPK F +NWA+ + T
Sbjct:   29 ARKSRKAVFRRTIDYNASAINYLQNRIWVSRDLDRPMLQPDYLWSPKLCPPRSYMDSPMNCVMSKPVRTSTNKNKCPIYCVCWTPEGRRLITGAFSGEFTLWNGLTFNFETILQAHESQIRCMKWSHNEEWLLTADHSGYVKYWQANMNNVEMYQAHKEPIRGVSFCPFDNKFVTCSDDSTVRIWDFHRCAEERVLRGHGSDVRSVAWHPVLSLIISGSKDAQQPIKLWDPKTGESVSTLYVHKNTCTDVSWNDNGNWFLTASRDHLIKLFDLRNLKSELQTFRGHKRDVMRVAWHPFHESLFVSGSADGAIFYWLAGTDTELGAVDNAHESMIWSLAWHPFGHILVSGANDFATKFWTRNRPGDVLKDTISAVGPDNLVQAVSAT--NLLANTYSFGDPEVVDNSFNIDLFKLLTETPISSNRIDTLDDLAFSTNPNDLSTTEIPGLNEGPVTDLNITDTDDPEEREKNKLRG--SRTIPKEFAANWASTRIT 518
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BLAST of Polyadenylation factor subunit 2 vs. TrEMBL
Match: A0A5K3EGU8 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 274/437 (62.70%), Postives = 337/437 (77.12%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEM 1508
             +RMRKA+FRRTIDYN+SV  ++++R WKR   SR A+QPD +Y +L+ PP+DY DNPMNCV  K VRTSTNKNKCPIY VCWTP+GRRLITGA SGEFTLWNGLTFNFETILQAH+  IR MKWS+N+EWL++AD +G+VKYWQANMN+V ++QAHK  +RGVSF   D KFVTCS+D TVRIWDF    EER LRGHG +VR VAWHP KSL++SGSKD+QQP+KLW+PK GE ++T+YVHK+TCTD+  NKNGNWFLTAS+DH IKLFD+R +KTE+Q FRGHKKDV+RVAWHP HE LFASGS DGA+ +W  GT+ E+GA++DAH+++IWSL WHP+GHIL SG+NDFATKFWTRNRPGD+LKD +      A            + N++     E +    + K++ST  A I     S    L+   G +
Sbjct:   25 ARRMRKAIFRRTIDYNASVINYLKERVWKRSPRSRLALQPDYLYNYLMNPPSDYLDNPMNCVTGKLVRTSTNKNKCPIYCVCWTPEGRRLITGAFSGEFTLWNGLTFNFETILQAHEAQIRCMKWSHNDEWLLTADHAGYVKYWQANMNNVQMYQAHKMPIRGVSFSQFDSKFVTCSDDATVRIWDFFRCYEERALRGHGSDVRSVAWHPYKSLIISGSKDAQQPIKLWEPKTGESVATLYVHKNTCTDVAWNKNGNWFLTASRDHLIKLFDLRYMKTELQTFRGHKKDVMRVAWHPCHECLFASGSADGAIHFWCTGTETELGAIDDAHESMIWSLAWHPLGHILVSGANDFATKFWTRNRPGDILKDIIGTGNAVA---------STGIANVLPALNTEDLASVTLSKVASTTNANINGVGGSLARALADAAGRL 452
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BLAST of Polyadenylation factor subunit 2 vs. TrEMBL
Match: A0A158QTS7 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS5240 PE=4 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 274/437 (62.70%), Postives = 337/437 (77.12%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEM 1508
             +RMRKA+FRRTIDYN+SV  ++++R WKR   SR A+QPD +Y +L+ PP+DY DNPMNCV  K VRTSTNKNKCPIY VCWTP+GRRLITGA SGEFTLWNGLTFNFETILQAH+  IR MKWS+N+EWL++AD +G+VKYWQANMN+V ++QAHK  +RGVSF   D KFVTCS+D TVRIWDF    EER LRGHG +VR VAWHP KSL++SGSKD+QQP+KLW+PK GE ++T+YVHK+TCTD+  NKNGNWFLTAS+DH IKLFD+R +KTE+Q FRGHKKDV+RVAWHP HE LFASGS DGA+ +W  GT+ E+GA++DAH+++IWSL WHP+GHIL SG+NDFATKFWTRNRPGD+LKD +      A            + N++     E +    + K++ST  A I     S    L+   G +
Sbjct:   24 ARRMRKAIFRRTIDYNASVINYLKERVWKRSPRSRLALQPDYLYNYLMNPPSDYLDNPMNCVTGKLVRTSTNKNKCPIYCVCWTPEGRRLITGAFSGEFTLWNGLTFNFETILQAHEAQIRCMKWSHNDEWLLTADHAGYVKYWQANMNNVQMYQAHKMPIRGVSFSQFDSKFVTCSDDATVRIWDFFRCYEERALRGHGSDVRSVAWHPYKSLIISGSKDAQQPIKLWEPKTGESVATLYVHKNTCTDVAWNKNGNWFLTASRDHLIKLFDLRYMKTELQTFRGHKKDVMRVAWHPCHECLFASGSADGAIHFWCTGTETELGAIDDAHESMIWSLAWHPLGHILVSGANDFATKFWTRNRPGDILKDIIGTGNAVA---------STGIANVLPALNTEDLASVTLSKVASTTNANINGVGGSLARALADAAGRL 451
[Close]
BLAST of Polyadenylation factor subunit 2 vs. TrEMBL
Match: A0A0X3PC80 (WD_REPEATS_REGION domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR124441 PE=4 SV=1)

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 264/394 (67.01%), Postives = 326/394 (82.74%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI 1379
             +RMRKA+FRRTIDYN++V  +++ R W+R    R AIQPD +Y  LL PP +Y D+PMNCV  K VRTSTNKNKCPIY VCWTP+GRRLITGA SGEFTLWNGLTFNFETILQAH++ IR MKWS+N++WL++AD SG+VKYWQANMN+V ++QAHK+ +RGVSF P D KFVTCS+D+TVRIWDF    EERVLRGHG +VR VAWHP  SL++SGSKD+QQP+KLW+PK GE I+T+YVHK+TCTD+  N+NGNWFLTAS+DH IKLFD+R +KTEMQ FRGHKKDV+RVAWHP HE+LFASGS DG +L+W  GTD E+GA++DAH+++IWSL WHP+GHIL SG+NDFATKFWTRNRPGD+LK+ +    +  + +  T+   +  E+ 
Sbjct:   22 ARRMRKAIFRRTIDYNATVITYLKDRIWQRTTQKRPAIQPDYLYNFLLNPPGEYLDSPMNCVTGKPVRTSTNKNKCPIYCVCWTPEGRRLITGAYSGEFTLWNGLTFNFETILQAHESQIRCMKWSHNDDWLLTADHSGYVKYWQANMNNVEMYQAHKEPIRGVSFSPFDTKFVTCSDDSTVRIWDFLRCTEERVLRGHGSDVRSVAWHPYMSLIMSGSKDAQQPIKLWEPKTGESIATLYVHKNTCTDVAWNQNGNWFLTASRDHLIKLFDLRYMKTEMQTFRGHKKDVMRVAWHPCHESLFASGSADGTILFWCAGTDTELGAIDDAHESMIWSLAWHPLGHILVSGANDFATKFWTRNRPGDILKEMVGTGNVGNLPALATDGLPSSFEHT 415
[Close]
BLAST of Polyadenylation factor subunit 2 vs. TrEMBL
Match: A0A183P5K1 (WD_REPEATS_REGION domain-containing protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS9637 PE=4 SV=1)

HSP 1 Score: 597.816 bits (1540), Expect = 0.000e+0
Identity = 292/498 (58.63%), Postives = 359/498 (72.09%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKV---FDFDIHKLSSTIKAEIEKSEKSD---------------IPGL-----SGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKST 1622
             ++ RKAVFRRTIDYN+S   +++ R W  +   R  +QPD ++   L PP  Y D+PMNCV +K VRTSTNKNKCPIY VCWTP+GRRLITGA SGEFTLWNGLTFNFETILQAH++ IR MKWS+NEEWL++AD SG+VKYWQANMN+V ++QAHK+ +RGVSFCP D KFVTCS+D+TVRIWDF    EERVLRGHG +VR VAWHP+ SL++SGSKD+QQP+KLWDPK GE +ST+YVHK+TCTD+  N NGNWFLTAS+DH IKLFD+RNLK+E+Q FRGHK+DV+RVAWHP+HE+LF SGS DGA+ YWL GTD E+GAV++AH+++IWSL WHP GHIL SG+NDFATKFWTRNRPGDVLKD +       +   V+      L N     + E V   F+ D+ KL +       + +  D               IPGL     + LN    + P E +     S      SRTIPK F +NWA+ + T
Sbjct:   29 ARKSRKAVFRRTIDYNASAINYLQNRIWVSRDLDRPMLQPDYLWSPKLCPPRSYMDSPMNCVMSKPVRTSTNKNKCPIYCVCWTPEGRRLITGAFSGEFTLWNGLTFNFETILQAHESQIRCMKWSHNEEWLLTADHSGYVKYWQANMNNVEMYQAHKEPIRGVSFCPFDNKFVTCSDDSTVRIWDFHRCAEERVLRGHGSDVRSVAWHPVLSLIISGSKDAQQPIKLWDPKTGESVSTLYVHKNTCTDVSWNDNGNWFLTASRDHLIKLFDLRNLKSELQTFRGHKRDVMRVAWHPFHESLFVSGSADGAIFYWLAGTDTELGAVDNAHESMIWSLAWHPFGHILVSGANDFATKFWTRNRPGDVLKDTISAVGPDNLVQAVSAT--NLLANTYSFGDPEVVDNSFNIDLFKLLTETPISSNRIDTLDDLAFSTNPNDLSTTEIPGLNEGPVTDLNITDTDDPEEREKNKLRS------SRTIPKEFAANWASTRIT 518
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Cavefish
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 493.426 bits (1269), Expect = 5.438e-160
Identity = 238/445 (53.48%), Postives = 306/445 (68.76%), Query Frame = 3 
Query:  339 LTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVK---SEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGL-----SGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKSTPAVYANEPP 1649
            + PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W  G + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +    +E  +N    L  I  M   E++    + +  +T K    ++E S IPGL       +  +++ APT++             ++ IP  FQ  WA  K  PA+   E P
Sbjct:    1 MVPPVGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHTGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGAEYDDNEPNSLAAIPGMGIPEQL-KVAMEQEQTTDKETAPEAEMS-IPGLDWGMDEVMQKDLKKAPTKKV----------PYAKPIPAQFQQAWAENK-VPALPPGEIP 432
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Cavefish
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 493.812 bits (1270), Expect = 1.302e-159
Identity = 238/445 (53.48%), Postives = 306/445 (68.76%), Query Frame = 3 
Query:  339 LTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVK---SEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGL-----SGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKSTPAVYANEPP 1649
            + PP    +NPMN V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W  G + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +    +E  +N    L  I  M   E++    + +  +T K    ++E S IPGL       +  +++ APT++             ++ IP  FQ  WA  K  PA+   E P
Sbjct:    1 MVPPVGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHTGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGAEYDDNEPNSLAAIPGMGIPEQL-KVAMEQEQTTDKETAPEAEMS-IPGLDWGMDEVMQKDLKKAPTKKV----------PYAKPIPAQFQQAWAENK-VPALPPGEIP 432
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Cavefish
Match: POC1B (POC1 centriolar protein homolog B [Source:NCBI gene;Acc:103029957])

HSP 1 Score: 107.071 bits (266), Expect = 1.829e-24
Identity = 93/342 (27.19%), Postives = 149/342 (43.57%), Query Frame = 3 
Query:  444 WTPDGRRLITGASSGEFTLWN----GLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANM-NDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGD----------GALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI------MKMSENEKV 1406
            ++P  ++L TG+S     +WN       F FE     H   + A+ +S + + L SA     V+ W  N+  D  VF AH  +VR V+F    ++ +T S+D +++IW     K    L  H   VRC  + P   L+ S   D  + ++LWD  + +CI+T   +    T +  N +G    ++  D+ +K++DIR  K  +Q ++ H   V   ++HP    L  SGS D          G L+Y L G           H   + ++ +   G + ASG  D     W  N   D L      E L+     VT +P   L +I      +  ++NE V
Sbjct:   26 FSPSKKQLATGSSDKTVMVWNLNPKARAFRFE----GHKDVVTAVHFSPSGDLLASASRDKTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCGDD--RTVRLWDTSSRQCINTFTDYGGPATFVDFNASGTCIASSGADNTLKIWDIRTNKL-IQHYQVHSASVNCFSFHPSGNYLI-SGSSDSTVKILDLLEGRLIYTLYG-----------HKGPVLAVVFSREGDLFASGGADLQVLMWKTNF--DALN---YRELLSRHSRRVTPDPPPHLNDIYPRSPHLHHTQNETV 343

HSP 2 Score: 96.6709 bits (239), Expect = 5.037e-21
Identity = 60/239 (25.10%), Postives = 111/239 (46.44%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            + AV ++P G  L + +      LW        T+  AH   +R++ +S++ + L++A D   +K W  +    +     H + VR   F P  +   +C +D TVR+WD  + +       +GG    V ++   + + S   D+   LK+WD +  + I    VH ++      + +GN+ ++ S D  +K+ D+   +    ++ GHK  V+ V +    + LFASG  D  +L W
Sbjct:   63 VTAVHFSPSGDLLASASRDKTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCINTFTDYGGPATFVDFNASGTCIASSGADNT--LKIWDIRTNKLIQHYQVHSASVNCFSFHPSGNYLISGSSDSTVKILDLLEGRLIYTLY-GHKGPVLAVVFSREGD-LFASGGADLQVLMW 297

HSP 3 Score: 68.9366 bits (167), Expect = 7.305e-12
Identity = 51/205 (24.88%), Postives = 84/205 (40.98%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            F+ H+D+V    F PS K+  T S+D TV +W+           GH   V  V + P   LL S S+D  + ++LW P      +    H +T   +  + +G   +TAS D  +K++ +   K    +      + +R A       L AS   D  +  W   +   +    D      + +D++  G  +AS   D   K W
Sbjct:   14 FKGHRDAVPCADFSPSKKQLATGSSDKTVMVWNLNPKARAFRFEGHKDVVTAVHFSPSGDLLASASRD--KTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSL--NQHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCINTFTDYGGPATF-VDFNASGTCIASSGADNTLKIW 213

HSP 4 Score: 52.7582 bits (125), Expect = 8.265e-7
Identity = 42/166 (25.30%), Postives = 74/166 (44.58%), Query Frame = 3 
Query:  774 ERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            ER  +GH   V C  + P K  L +GS D  + + +W+            HK   T +  + +G+   +AS+D  ++L+   N+K +  VF  H   V  V +    + L  + S D +L  W V     + ++ + H N +    + P G ++AS  +D   + W
Sbjct:   11 ERCFKGHRDAVPCADFSPSKKQLATGSSD--KTVMVWNLNPKARAFRFEGHKDVVTAVHFSPSGDLLASASRDKTVRLW-TPNIKGDSTVFTAHTATVRSVNFSSDGQRLI-TASDDKSLKIWSVHRQKFIYSL-NQHTNWVRCARFSPDGRLVASCGDDRTVRLW 171
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Cavefish
Match: POC1B (POC1 centriolar protein homolog B [Source:NCBI gene;Acc:103029957])

HSP 1 Score: 108.612 bits (270), Expect = 2.182e-24
Identity = 93/342 (27.19%), Postives = 149/342 (43.57%), Query Frame = 3 
Query:  444 WTPDGRRLITGASSGEFTLWN----GLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANM-NDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGD----------GALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI------MKMSENEKV 1406
            ++P  ++L TG+S     +WN       F FE     H   + A+ +S + + L SA     V+ W  N+  D  VF AH  +VR V+F    ++ +T S+D +++IW     K    L  H   VRC  + P   L+ S   D  + ++LWD  + +CI+T   +    T +  N +G    ++  D+ +K++DIR  K  +Q ++ H   V   ++HP    L  SGS D          G L+Y L G           H   + ++ +   G + ASG  D     W  N   D L      E L+     VT +P   L +I      +  ++NE V
Sbjct:   39 FSPSKKQLATGSSDKTVMVWNLNPKARAFRFE----GHKDVVTAVHFSPSGDLLASASRDKTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCGDD--RTVRLWDTSSRQCINTFTDYGGPATFVDFNASGTCIASSGADNTLKIWDIRTNKL-IQHYQVHSASVNCFSFHPSGNYLI-SGSSDSTVKILDLLEGRLIYTLYG-----------HKGPVLAVVFSREGDLFASGGADLQVLMWKTNF--DALN---YRELLSRHSRRVTPDPPPHLNDIYPRSPHLHHTQNETV 356

HSP 2 Score: 98.9821 bits (245), Expect = 3.445e-21
Identity = 60/239 (25.10%), Postives = 111/239 (46.44%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            + AV ++P G  L + +      LW        T+  AH   +R++ +S++ + L++A D   +K W  +    +     H + VR   F P  +   +C +D TVR+WD  + +       +GG    V ++   + + S   D+   LK+WD +  + I    VH ++      + +GN+ ++ S D  +K+ D+   +    ++ GHK  V+ V +    + LFASG  D  +L W
Sbjct:   76 VTAVHFSPSGDLLASASRDKTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCINTFTDYGGPATFVDFNASGTCIASSGADNT--LKIWDIRTNKLIQHYQVHSASVNCFSFHPSGNYLISGSSDSTVKILDLLEGRLIYTLY-GHKGPVLAVVFSREGD-LFASGGADLQVLMW 310

HSP 3 Score: 69.707 bits (169), Expect = 6.335e-12
Identity = 51/205 (24.88%), Postives = 84/205 (40.98%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            F+ H+D+V    F PS K+  T S+D TV +W+           GH   V  V + P   LL S S+D  + ++LW P      +    H +T   +  + +G   +TAS D  +K++ +   K    +      + +R A       L AS   D  +  W   +   +    D      + +D++  G  +AS   D   K W
Sbjct:   27 FKGHRDAVPCADFSPSKKQLATGSSDKTVMVWNLNPKARAFRFEGHKDVVTAVHFSPSGDLLASASRD--KTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSL--NQHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCINTFTDYGGPATF-VDFNASGTCIASSGADNTLKIW 226

HSP 4 Score: 57.3806 bits (137), Expect = 4.399e-8
Identity = 45/182 (24.73%), Postives = 81/182 (44.51%), Query Frame = 3 
Query:  726 SNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            S +  V ++D +    ER  +GH   V C  + P K  L +GS D  + + +W+            HK   T +  + +G+   +AS+D  ++L+   N+K +  VF  H   V  V +    + L  + S D +L  W V     + ++ + H N +    + P G ++AS  +D   + W
Sbjct:    8 SKEPDVNLYDLEDPTLERCFKGHRDAVPCADFSPSKKQLATGSSD--KTVMVWNLNPKARAFRFEGHKDVVTAVHFSPSGDLLASASRDKTVRLW-TPNIKGDSTVFTAHTATVRSVNFSSDGQRLI-TASDDKSLKIWSVHRQKFIYSL-NQHTNWVRCARFSPDGRLVASCGDDRTVRLW 184
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Cavefish
Match: POC1B (POC1 centriolar protein homolog B [Source:NCBI gene;Acc:103029957])

HSP 1 Score: 108.227 bits (269), Expect = 2.808e-24
Identity = 93/342 (27.19%), Postives = 149/342 (43.57%), Query Frame = 3 
Query:  444 WTPDGRRLITGASSGEFTLWN----GLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANM-NDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGD----------GALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENI------MKMSENEKV 1406
            ++P  ++L TG+S     +WN       F FE     H   + A+ +S + + L SA     V+ W  N+  D  VF AH  +VR V+F    ++ +T S+D +++IW     K    L  H   VRC  + P   L+ S   D  + ++LWD  + +CI+T   +    T +  N +G    ++  D+ +K++DIR  K  +Q ++ H   V   ++HP    L  SGS D          G L+Y L G           H   + ++ +   G + ASG  D     W  N   D L      E L+     VT +P   L +I      +  ++NE V
Sbjct:   26 FSPSKKQLATGSSDKTVMVWNLNPKARAFRFE----GHKDVVTAVHFSPSGDLLASASRDKTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCGDD--RTVRLWDTSSRQCINTFTDYGGPATFVDFNASGTCIASSGADNTLKIWDIRTNKL-IQHYQVHSASVNCFSFHPSGNYLI-SGSSDSTVKILDLLEGRLIYTLYG-----------HKGPVLAVVFSREGDLFASGGADLQVLMWKTNF--DALN---YRELLSRHSRRVTPDPPPHLNDIYPRSPHLHHTQNETV 343

HSP 2 Score: 98.2117 bits (243), Expect = 5.169e-21
Identity = 60/239 (25.10%), Postives = 111/239 (46.44%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            + AV ++P G  L + +      LW        T+  AH   +R++ +S++ + L++A D   +K W  +    +     H + VR   F P  +   +C +D TVR+WD  + +       +GG    V ++   + + S   D+   LK+WD +  + I    VH ++      + +GN+ ++ S D  +K+ D+   +    ++ GHK  V+ V +    + LFASG  D  +L W
Sbjct:   63 VTAVHFSPSGDLLASASRDKTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSLNQHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCINTFTDYGGPATFVDFNASGTCIASSGADNT--LKIWDIRTNKLIQHYQVHSASVNCFSFHPSGNYLISGSSDSTVKILDLLEGRLIYTLY-GHKGPVLAVVFSREGD-LFASGGADLQVLMW 297

HSP 3 Score: 69.3218 bits (168), Expect = 8.755e-12
Identity = 51/205 (24.88%), Postives = 84/205 (40.98%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            F+ H+D+V    F PS K+  T S+D TV +W+           GH   V  V + P   LL S S+D  + ++LW P      +    H +T   +  + +G   +TAS D  +K++ +   K    +      + +R A       L AS   D  +  W   +   +    D      + +D++  G  +AS   D   K W
Sbjct:   14 FKGHRDAVPCADFSPSKKQLATGSSDKTVMVWNLNPKARAFRFEGHKDVVTAVHFSPSGDLLASASRD--KTVRLWTPNIKGDSTVFTAHTATVRSVNFSSDGQRLITASDDKSLKIWSVHRQKFIYSL--NQHTNWVRCARFSPDGRLVASCGDDRTVRLWDTSSRQCINTFTDYGGPATF-VDFNASGTCIASSGADNTLKIW 213

HSP 4 Score: 53.1434 bits (126), Expect = 8.500e-7
Identity = 42/166 (25.30%), Postives = 74/166 (44.58%), Query Frame = 3 
Query:  774 ERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            ER  +GH   V C  + P K  L +GS D  + + +W+            HK   T +  + +G+   +AS+D  ++L+   N+K +  VF  H   V  V +    + L  + S D +L  W V     + ++ + H N +    + P G ++AS  +D   + W
Sbjct:   11 ERCFKGHRDAVPCADFSPSKKQLATGSSD--KTVMVWNLNPKARAFRFEGHKDVVTAVHFSPSGDLLASASRDKTVRLW-TPNIKGDSTVFTAHTATVRSVNFSSDGQRLI-TASDDKSLKIWSVHRQKFIYSL-NQHTNWVRCARFSPDGRLVASCGDDRTVRLW 171
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Sea Lamprey
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 532.717 bits (1371), Expect = 3.735e-173
Identity = 256/483 (53.00%), Postives = 324/483 (67.08%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAA-----VKSEVTNNPDAELENIMKMSENEKVFD-FDIHKLSSTIKAEIEKSEKSDIPGL----SGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRK+V R+TIDYN SV  ++E R W+R +    AIQPD  Y   L PP      P+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGL FNFETILQAHD+ +RAM WS+N+ W+++AD  GFVKYWQ+NMN+V +FQAHK+ +R  SF P+D KF TCS+D TVR+WDF    EER+LRGHG +V+CV WHP K LL+SGSKDSQQP+K WDPK+G  ++T++ HK+T  ++  N+NGNW LTAS+DH  KLFDIRNLK E+Q+FRGHKK+   VAWHP HE  FASG  DG+LL+W VG + EVG  + AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L       + +E  +N      NI  M   E++    +  +    ++AE E +    IPGL      L  E +  PT++             S+ IP  FQ  W   K
Sbjct:   45 GKRMRKSVNRKTIDYNPSVVKYLENRVWQRDHRDLRAIQPDPSYYGDLLPPMGMMHKPINAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLAFNFETILQAHDSSVRAMTWSHNDMWMLTADHGGFVKYWQSNMNNVKMFQAHKEPIREASFAPTDNKFATCSDDGTVRVWDFMRCHEERILRGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKSGHSLATLHAHKNTVMEVKWNQNGNWLLTASRDHLCKLFDIRNLKEEVQIFRGHKKEATAVAWHPIHEGFFASGGSDGSLLFWHVGVEKEVGGTDVAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGNMSDDMIAEYDDNEPLSAPNIPGMGIAEQLKQVLEQEQKEKVVEAEPEVA----IPGLDWGVEELIKEQKKLPTKKI----------PYSKPIPAQFQQAWQQNK 513
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Sea Lamprey
Match: WDR33 (WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651])

HSP 1 Score: 533.102 bits (1372), Expect = 6.054e-173
Identity = 256/483 (53.00%), Postives = 324/483 (67.08%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAA-----VKSEVTNNPDAELENIMKMSENEKVFD-FDIHKLSSTIKAEIEKSEKSDIPGL----SGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRK+V R+TIDYN SV  ++E R W+R +    AIQPD  Y   L PP      P+N V  K VRTSTNK KCP++ V WTP+GRRL+TGASSGEFTLWNGL FNFETILQAHD+ +RAM WS+N+ W+++AD  GFVKYWQ+NMN+V +FQAHK+ +R  SF P+D KF TCS+D TVR+WDF    EER+LRGHG +V+CV WHP K LL+SGSKDSQQP+K WDPK+G  ++T++ HK+T  ++  N+NGNW LTAS+DH  KLFDIRNLK E+Q+FRGHKK+   VAWHP HE  FASG  DG+LL+W VG + EVG  + AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L       + +E  +N      NI  M   E++    +  +    ++AE E +    IPGL      L  E +  PT++             S+ IP  FQ  W   K
Sbjct:   45 GKRMRKSVNRKTIDYNPSVVKYLENRVWQRDHRDLRAIQPDPSYYGDLLPPMGMMHKPINAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLAFNFETILQAHDSSVRAMTWSHNDMWMLTADHGGFVKYWQSNMNNVKMFQAHKEPIREASFAPTDNKFATCSDDGTVRVWDFMRCHEERILRGHGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKSGHSLATLHAHKNTVMEVKWNQNGNWLLTASRDHLCKLFDIRNLKEEVQIFRGHKKEATAVAWHPIHEGFFASGGSDGSLLFWHVGVEKEVGGTDVAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGNMSDDMIAEYDDNEPLSAPNIPGMGIAEQLKQVLEQEQKEKVVEAEPEVA----IPGLDWGVEELIKEQKKLPTKKI----------PYSKPIPAQFQQAWQQNK 513
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Sea Lamprey
Match: POC1A (POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488])

HSP 1 Score: 101.679 bits (252), Expect = 5.651e-23
Identity = 61/243 (25.10%), Postives = 113/243 (46.50%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            +K  + +V ++P G  +++ +      LW        T+ +AH   +R++ +S + + LV+A D   +K W  +    +     H + VR   F P  +  V+ S+D TVR+WD  + +       HGG V  V +HP  + + +   D+   +K+WD +  + +    VH +    +  +  GN+ +TAS D  +K+ D+   +       GH+     VA+    +  FASG  D  ++ W
Sbjct:   59 HKDAVMSVQFSPSGHLVVSASRDKTVRLWVPSVKGESTVFKAHTATVRSVSFSADGQSLVTASDDKSIKVWTVHRQKFLYSLNQHSNWVRSAKFSPDGRLIVSGSDDRTVRVWDSNSRECVHTFYEHGGFVNQVDFHPSGTCIAAAGTDNT--VKVWDIRMNKLLQHYQVHGAAVNSLSFHPTGNYLITASNDSTLKVLDLVEGRL-FYTLHGHQGPATAVAFSRAGD-FFASGGSDEQVMVW 297

HSP 2 Score: 100.138 bits (248), Expect = 2.268e-22
Identity = 72/294 (24.49%), Postives = 129/294 (43.88%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANM-NDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSG---------DGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
            I +V + P+ ++L +G+      +WN            H   + ++++S +   +VSA     V+ W  ++  +  VF+AH  +VR VSF    +  VT S+D ++++W     K    L  H   VR   + P   L++SGS D  + +++WD  + EC+ T Y H      +  + +G     A  D+ +K++DIR +   +Q ++ H   V  +++HP    L  + +          +G L Y L G           H     ++ +   G   ASG +D     W  N
Sbjct:   21 ITSVDFNPNMKQLASGSMDACLMVWNFKPQTRAYRFVGHKDAVMSVQFSPSGHLVVSASRDKTVRLWVPSVKGESTVFKAHTATVRSVSFSADGQSLVTASDDKSIKVWTVHRQKFLYSLNQHSNWVRSAKFSPDGRLIVSGSDD--RTVRVWDSNSRECVHTFYEHGGFVNQVDFHPSGTCIAAAGTDNTVKVWDIR-MNKLLQHYQVHGAAVNSLSFHPTGNYLITASNDSTLKVLDLVEGRLFYTLHG-----------HQGPATAVAFSRAGDFFASGGSDEQVMVWKTN 300

HSP 3 Score: 76.2554 bits (186), Expect = 9.626e-15
Identity = 53/215 (24.65%), Postives = 93/215 (43.26%), Query Frame = 3 
Query:  627 WQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            WQ + +    F+ H+D++  V F P+ K+  + S D  + +W+F+         GH   V  V + P   L++S S+D  + ++LW P      +    H +T   +  + +G   +TAS D  IK++ +   K    +      + +R A       L  SGS D  +  W   +   V    + H   +  +D+HP G  +A+   D   K W
Sbjct:    4 WQEDPSLERHFKGHRDTITSVDFNPNMKQLASGSMDACLMVWNFKPQTRAYRFVGHKDAVMSVQFSPSGHLVVSASRD--KTVRLWVPSVKGESTVFKAHTATVRSVSFSADGQSLVTASDDKSIKVWTVHRQKFLYSL--NQHSNWVRSAKFSPDGRLIVSGSDDRTVRVWDSNSRECVHTFYE-HGGFVNQVDFHPSGTCIAAAGTDNTVKVW 213

HSP 4 Score: 65.855 bits (159), Expect = 1.890e-11
Identity = 49/221 (22.17%), Postives = 90/221 (40.72%), Query Frame = 3 
Query:  405 STNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEM-QVFRGHKK 1061
            S N++   + +  ++PDGR +++G+                                          D   V+ W +N  + V+ F  H   V  V F PS         DNTV++WD +  K  +  + HG  V  +++HP  + L++ S DS   LK+ D   G    T++ H+   T +  ++ G++F +   D  + ++       +  +V R HK+
Sbjct:  139 SLNQHSNWVRSAKFSPDGRLIVSGS------------------------------------------DDRTVRVWDSNSRECVHTFYEHGGFVNQVDFHPSGTCIAAAGTDNTVKVWDIRMNKLLQHYQVHGAAVNSLSFHPTGNYLITASNDST--LKVLDLVEGRLFYTLHGHQGPATAVAFSRAGDFFASGGSDEQVMVWKTNFDSVDYSEVLRSHKQ 315
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Sea Lamprey
Match: pafah1b1b (platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:NCBI gene;Acc:394247])

HSP 1 Score: 98.9821 bits (245), Expect = 1.159e-22
Identity = 67/247 (27.13%), Postives = 114/247 (46.15%), Query Frame = 3 
Query:  591 LVSADDSGFVKYWQANMNDVN-VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHET-------------------LFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            +VSA +   +K W     D     + H DSV+ +SF  S K   +CS D TV++WDFQ+++  R + GH   V  VA+ P    L+S S+D  + +K+W+ + G C+ T   H+     +  N++G+   + S D  ++++ +   K      R H+  V  V+W P   +                      SGS D  +  W + T + V  +   HDN +  + +HP G  + S ++D   + W
Sbjct:   62 IVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLSGKMLASCSADMTVKLWDFQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRD--KTMKMWEVQTGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVW-VTATKECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRDKTIKMWDISTGICVITLV-GHDNWVRGVLFHPGGKFILSCADDKTLRVW 304

HSP 2 Score: 86.6557 bits (213), Expect = 1.660e-18
Identity = 61/225 (27.11%), Postives = 105/225 (46.67%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHP--------------------MGHILASGSNDFATKFW 1271
               H+  V  V F P     V+ S D T+++WD++T   ER L+GH   V+ +++     +L S S D    +KLWD ++ EC+ TM+ H    + +    NG+  ++AS+D  +K+++++     ++ F GH ++ +R+       +L AS S D  +  W+  T  E  A    H++++  + W P                     G  L SGS D   K W
Sbjct:   43 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLSGKMLASCSAD--MTVKLWDFQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYC-VKTFTGH-REWVRMVRPNQDGSLIASCSNDQTVRVWVTATK-ECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRDKTIKMW 262

HSP 3 Score: 85.8853 bits (211), Expect = 3.158e-18
Identity = 64/253 (25.30%), Postives = 113/253 (44.66%), Query Frame = 3 
Query:  456 GRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKS--------------------LLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWH---PYHETLFASGSGDGALLYW 1142
            G+ L + ++     LW+  +F     +  HD ++ ++ +  N + LVSA     +K W+      V  F  H++ VR V          +CSND TVR+W   T + +  LR H   V CV+W P  +                     LLSGS+D  + +K+WD   G C+ T+  H +    +  +  G + L+ + D  ++++D +N + + +    H+  V  + +H   PY      +GS D ++  W
Sbjct:  101 GKMLASCSADMTVKLWDFQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVTATKECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRD--KTIKMWDISTGICVITLVGHDNWVRGVLFHPGGKFILSCADDKTLRVWDYKNKRCQ-KSLAAHEHFVTSLDFHKTAPY----VITGSVDQSVKVW 346

HSP 4 Score: 79.337 bits (194), Expect = 4.725e-16
Identity = 71/312 (22.76%), Postives = 132/312 (42.31%), Query Frame = 3 
Query:  399 RTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGI--------------------NKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            + + + ++ P+  V + P    +++ +      +W+  T +FE  L+ H   ++ + +  + + L S      VK W   +   +     H  +V  V+F P+    V+ S D T+++W+ QT    +   GH   VR V  +   SL+ S S D  Q +++W     EC + +  H+     +                       K G + L+ S+D  IK++DI      + +  GH   V  V +HP  + +  S + D  L  W         ++  AH++ + SLD+H     + +GS D + K W
Sbjct:   40 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLSGKMLASCSADMTVKLWDFQSFECLRTMHGHDHNVSSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVKTFTGHREWVRMVRPNQDGSLIASCSND--QTVRVWVTATKECKAELREHEHVVECVSWAPDAASPVILEATGAEAKKGGKPGPYLLSGSRDKTIKMWDISTGICVITLV-GHDNWVRGVLFHPGGKFIL-SCADDKTLRVWDYKNKRCQKSLA-AHEHFVTSLDFHKTAPYVITGSVDQSVKVW 346

HSP 5 Score: 54.6842 bits (130), Expect = 4.656e-8
Identity = 35/123 (28.46%), Postives = 61/123 (49.59%), Query Frame = 3 
Query:  528 TILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPK 893
             IL+A  T   A K      +L+S      +K W  +    V     H + VRGV F P  K  ++C++D T+R+WD++  + ++ L  H   V  + +H     +++GS D  Q +K+W+ +
Sbjct:  231 VILEA--TGAEAKKGGKPGPYLLSGSRDKTIKMWDISTGICVITLVGHDNWVRGVLFHPGGKFILSCADDKTLRVWDYKNKRCQKSLAAHEHFVTSLDFHKTAPYVITGSVD--QSVKVWECR 349
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Sea Lamprey
Match: taf5l (TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987])

HSP 1 Score: 94.7449 bits (234), Expect = 2.152e-20
Identity = 62/210 (29.52%), Postives = 99/210 (47.14%), Query Frame = 3 
Query:  642 NDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            +DV   +AH   V  V F P     ++CS D +VR WD +T+    V +GH   V  V    +     SGS D  +  +LW P+    +     H S    +  + NG++  T S D  ++L+  +   +  ++F GH+  V+ +A+ P    L ASG  D  +  W +G+   V  +   H + I  L + P G  LASGS+D + + W
Sbjct:  334 SDVKTLRAHSGPVYAVRFLPGGAGLLSCSEDASVRFWDPRTFTNTAVYQGHAYPVWDVDVSALGLYFCSGSHD--RTARLWVPERAFPLRVYAGHVSDVNVVRFHPNGSYVATGSADRTVRLWSAQQ-GSAARLFTGHRGAVLALAFSPGGR-LLASGGEDQRVRLWDIGSGAIVKELR-GHSDDITCLSFSPDGSALASGSSDGSVRVW 538

HSP 2 Score: 88.9669 bits (219), Expect = 1.583e-18
Identity = 54/203 (26.60%), Postives = 88/203 (43.35%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKT 1031
            P+YAV + P G  L++ +       W+  TF    + Q H   +  +  S    +  S       + W       + V+  H   V  V F P+     T S D TVR+W  Q     R+  GH G V  +A+ P   LL SG +D  Q ++LWD  +G  +  +  H    T +  + +G+   + S D  ++++D+R   T
Sbjct:  345 PVYAVRFLPGGAGLLSCSEDASVRFWDPRTFTNTAVYQGHAYPVWDVDVSALGLYFCSGSHDRTARLWVPERAFPLRVYAGHVSDVNVVRFHPNGSYVATGSADRTVRLWSAQQGSAARLFTGHRGAVLALAFSPGGRLLASGGED--QRVRLWDIGSGAIVKELRGHSDDITCLSFSPDGSALASGSSDGSVRVWDVRGAST 545

HSP 3 Score: 81.6481 bits (200), Expect = 2.904e-16
Identity = 53/204 (25.98%), Postives = 93/204 (45.59%), Query Frame = 3 
Query:  534 LQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            L+AH   + A+++      L+S  +   V++W      +  V+Q H   V  V        F + S+D T R+W  +     RV  GH  +V  V +HP  S + +GS D  + ++LW  + G        H+     +  +  G    +  +D  ++L+DI +    ++  RGH  D+  +++ P    L ASGS DG++  W
Sbjct:  339 LRAHSGPVYAVRFLPGGAGLLSCSEDASVRFWDPRTFTNTAVYQGHAYPVWDVDVSALGLYFCSGSHDRTARLWVPERAFPLRVYAGHVSDVNVVRFHPNGSYVATGSAD--RTVRLWSAQQGSAARLFTGHRGAVLALAFSPGGRLLASGGEDQRVRLWDIGS-GAIVKELRGHSDDITCLSFSPDGSAL-ASGSSDGSVRVW 538
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Yeast
Match: PFS2 (Integral subunit of the pre-mRNA CPF complex; the cleavage and polyadenylation factor (CPF) complex plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex [Source:SGD;Acc:S000005261])

HSP 1 Score: 258.455 bits (659), Expect = 5.414e-78
Identity = 139/362 (38.40%), Postives = 211/362 (58.29%), Query Frame = 3 
Query:  225 RRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYR--DNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVN-VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGIN-KNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW--LVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGD 1292
            RR++D +S    +I     +R       ++P+  Y   + PP  YR  D  +N + +K    S+NK K  I A+ WTP+GRRL+    SGEF+LWN  +F FET++QAHD+ +  MK+S++ +W++S D  G +K WQ N + V  +  AH +S+R ++F  +D KFVTCS+DN ++IW+F   K+ERVL GH  +V+   WHP   L+ S SKD+   +KLWDP++G CIS++   K T          GN  +  SKD   ++FDIR    E+   R  + D + + WHP +E++F     DG+L ++  L   +  +  +  AHD  I SL ++P+GHI A+ + D   +FWTR RP D
Sbjct:   30 RRSVDVSSP---YINLYYNRRHGLPNLVVEPETSYTIDIMPPNAYRGRDRVIN-LPSKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNL--VKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRD-ETDYMTLEWHPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFWTRARPID 384
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Yeast
Match: TAF5 (Subunit (90 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification [Source:SGD;Acc:S000000402])

HSP 1 Score: 95.5153 bits (236), Expect = 1.060e-20
Identity = 55/204 (26.96%), Postives = 93/204 (45.59%), Query Frame = 3 
Query:  534 LQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNV-FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            L  H   + +  +S + ++L+S  +   V+ W  + +   V ++ H   V  VSF P    F T S+D T R+W        R+  GH  +V CV++HP    + +GS D  +  ++WD   G+ +     H +    I +  +G W  T S+D  I ++DI   K  ++  RGH K+ I    +     +  SG  D  +  W
Sbjct:  521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSD--KTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGK-RLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW 721

HSP 2 Score: 85.5001 bits (210), Expect = 1.651e-17
Identity = 55/203 (27.09%), Postives = 92/203 (45.32%), Query Frame = 3 
Query:  663 AHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
             H  +V   SF P +K  ++ S D TVR+W   T+      +GH   V  V++ P+     + S D  Q  +LW       +     H +    +  + NG +  T S D   +++D+ +    +++F GH   VI +A  P    L ++GS DG +  W +GT   +  +     N I+SL +   G++L SG  D   + W
Sbjct:  523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHD--QTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV-STGDSVRLFLGHTAPVISIAVCPDGRWL-STGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW 721

HSP 3 Score: 81.6481 bits (200), Expect = 2.211e-16
Identity = 51/204 (25.00%), Postives = 95/204 (46.57%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQAN-MNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVH-KSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTE 1034
            +Y+  ++PD + L++G+      LW+  T       + H+  +  + +S    +  +A      + W  + +  + +F  H + V  VSF P+     T S+D T R+WD  T    R+  GH   V  +A  P    L +GS+D    + +WD   G+ +  M  H K+    +  +K GN  ++   DH ++++D++   TE
Sbjct:  528 VYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGI--INVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTE 729
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Yeast
Match: TUP1 (General repressor of transcription; forms complex with Cyc8p, involved in the establishment of repressive chromatin structure through interactions with histones H3 and H4, appears to enhance expression of some genes [Source:SGD;Acc:S000000680])

HSP 1 Score: 95.1301 bits (235), Expect = 1.463e-20
Identity = 73/264 (27.65%), Postives = 119/264 (45.08%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTC-SNDNTVRIWDFQT-YKEERV------LRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWD------------PKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVA------WHPYHETLFASGSGDGALLYW 1142
            I +VC++PDG+ L TGA      +W+        ILQ H+  I ++ +  + + LVS      V+ W       ++  + +D V  V+  P D K++   S D  VR+WD +T +  ER+        GH   V  V +      ++SGS D  + +KLW+            P +G C  T   HK     +   +N  + L+ SKD  +  +D ++    + + +GH+  VI VA        P +  +FA+GSGD     W
Sbjct:  446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD--RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSPLGPEY-NVFATGSGDCKARIW 705
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Yeast
Match: PRP4 (Splicing factor; component of the U4/U6-U5 snRNP complex [Source:SGD;Acc:S000006382])

HSP 1 Score: 86.2705 bits (212), Expect = 4.024e-18
Identity = 79/294 (26.87%), Postives = 132/294 (44.90%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKW---SNNEEWLVSADDSGFVKYWQ-----ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNL-KTEMQVFRGHKKDV--IRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            PI AV  + D   + TG+ +G+  + N  T       L +H   I A+ W   SNN+  ++S  + G +K +Q       +  +     H+  +  V + PS K   + S+D T R+WD  T++E  +  GH   V  +++    SL+ SG  DS     LWD ++G  + T+  H      +  + NG    T   D  I ++DIR   + ++     H+  V  +R +     + L + G  D  +  +   T +++G++    D II SLD     H L SG  D + K W
Sbjct:  177 PISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQ--MISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLS--MLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGY-DNLINVYSSDTWLKMGSLAGHTDKII-SLDISNNSHFLVSGGWDRSIKLW 464
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Yeast
Match: COP1 (Alpha subunit of COPI vesicle coatomer complex; complex surrounds transport vesicles in the early secretory pathway [Source:SGD;Acc:S000002304])

HSP 1 Score: 80.8777 bits (198), Expect = 4.962e-16
Identity = 77/334 (23.05%), Postives = 127/334 (38.02%), Query Frame = 3 
Query:  435 AVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTH---IRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKA----------------------------GECISTMYVHKSTCTDIGINKNGNW---------FLTASKDHYIKLFDIRNLKT-EMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKF-WTRNRPGDVLKDN 1307
             + + P    ++    S    LW+   +   T+L   + H   +R + +   +   VSA D   +K W  + N  +     H D VR V F       ++ S+D T+RIW++Q  KE   L GH   V C  +HP   L++S S D  + +++WD                               G+C+    +        G  +  NW          ++ S D  +KL+ +   K  E+   RGH  +V  V +HP H+ L  S   D  L  W +     V   +  +D   W +  HP  ++  +  +     F   R RP   +  N
Sbjct:   16 GIAFHPSRPWVLVALFSSTIQLWD---YRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLD--ETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILE-------GHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHP-HQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDR-FWLIAAHPHINLFGAAHDSGIMVFKLDRERPCSFIHQN 335

HSP 2 Score: 73.1738 bits (178), Expect = 1.265e-13
Identity = 64/283 (22.61%), Postives = 119/283 (42.05%), Query Frame = 3 
Query:  528 TILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDV-NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLK----------------TEMQVFRGHKKDVI----------RVAWHPYHET--LFASGSGDGALLYWLVGTDM--EVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNR 1283
            T  ++  T  + + +  +  W++ A  S  ++ W   M  + + F+ H+  VRG+ F P+   FV+  +D T+++W   T K    L GH   VR V +H     ++S S D  Q +++W+ +  + I+ +  H         +   +  ++AS D  I+++DI  L+                 +  +  G   D +           V W  +H T  L  SGS D  +  W +      EV      H N + S+ +HP  +++ S   D   + W  ++
Sbjct:    5 TKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDD--QTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCR-GHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDK 284

HSP 3 Score: 71.2478 bits (173), Expect = 4.502e-13
Identity = 59/273 (21.61%), Postives = 111/273 (40.66%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYK-----------EER-------------------VLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGEC--ISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWL 1145
            P+  + + P     ++        +W+  T      L  H  ++R + +     W++SA D   ++ W   N  ++     H   V    F P+D   V+ S D T+RIWD    +           EE+                   +L GH   V   ++HP   L++SGS D Q  +KLW   A +   + T   H +    +  + + N  ++  +D  ++++D+ + +T ++ F+        +A HP H  LF +    G +++ L
Sbjct:   55 PVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQ--VKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDL-DKRTPVKQFKRENDRFWLIAAHP-HINLFGAAHDSGIMVFKL 323

HSP 4 Score: 69.3218 bits (168), Expect = 2.050e-12
Identity = 53/240 (22.08%), Postives = 99/240 (41.25%), Query Frame = 3 
Query:  639 MNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLV----------GT-------------------DMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            M  +  F++     +G++F PS    +     +T+++WD++          H G VR + +HP + + +S   D    +K+W     +C+ T+  H      +  ++   W ++AS D  I++++ +N K E+    GH   V+   +HP  + L  S S D  +  W +          GT                   D  V  + + H   +    +HP   ++ SGS+D   K W
Sbjct:    1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDD--YTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRK-EIACLTGHNHFVMCAQFHPTDD-LIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLW 236
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Nematostella
Match: EDO40986 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5J4])

HSP 1 Score: 484.952 bits (1247), Expect = 1.266e-165
Identity = 220/373 (58.98%), Postives = 286/373 (76.68%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKD----SVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKD 1304
            GKRMRKAV R+TIDYNS V  F+E R W +   SR  IQPD  Y   + PP+   DNP+N V  K VRTSTNK +CPI+ V WTP+GRRL+TGASSGEFTLWNGLTFNFETIL AH++ +RAM W++++ WL+SAD SG VKYWQ+NMN+V +++AHK+    ++   SF P+D K+ +C++D  V+IWDF    EE+ LRGHG +V+C+ WHP KSLL+SGSKDSQQP+KLWD + G  ++T+++HKST   I  N+NGNW LTAS+DH +KLFDIR +K E+Q FRGHK++   +AWHP HE LFASG  DGA+++W+ G+D +VG +E AH+ ++WSL WHP+GHIL SGSND  +KFWTRNR GD ++D
Sbjct:    5 GKRMRKAVIRKTIDYNSCVVKFLENRKWFKHLDSRHGIQPDEAYAAEILPPSCMPDNPINAVTTKFVRTSTNKLRCPIFCVVWTPEGRRLVTGASSGEFTLWNGLTFNFETILTAHESPVRAMVWNHHDSWLLSADHSGIVKYWQSNMNNVQMYEAHKEPQSRTLIISSFSPTDNKYASCADDGLVKIWDFYRCMEEKTLRGHGADVKCIDWHPHKSLLVSGSKDSQQPIKLWDTRTGNGLATLHLHKSTVMSIKWNQNGNWLLTASRDHLLKLFDIRAMK-ELQAFRGHKREATAIAWHPIHENLFASGGSDGAIMFWMSGSDKDVGNMESAHEGMVWSLAWHPLGHILCSGSNDHTSKFWTRNRLGDRMRD 376
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Nematostella
Match: EDO49767 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFR6])

HSP 1 Score: 110.923 bits (276), Expect = 7.377e-27
Identity = 80/293 (27.30%), Postives = 143/293 (48.81%), Query Frame = 3 
Query:  396 VRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQAN-MNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            +RT   +++  I  +  TPD +++ITG + G   +W+  T      L  H   +  +  S + ++LVS      VK W  + ++ V+  + HK+ V GV   P  K+ ++ S D TV+IWD +T      L GH G VR +A       L+S S+D  + L++W+ +    +ST+  H  T   +  + +  + ++ S+D  +K++D+ + K E++   GH  D+  VA  P    + +SG  D  +  W + +  E+ ++   H   +  +   P G  + SGS D   K W
Sbjct:    6 LRTIDGRSR-TILGIAVTPDTKKIITGGADGSIRVWDYETGKELNKLLDHTKLVYTLALSPHADFLVSGAFDHTVKIWDMDTLSLVHTLKGHKNWVSGVLVTPDSKRIISSSYDKTVKIWDVETCAFVNSLDGHDGHVRGIAITSDGRRLVSASQD--RTLRIWNLETFAHVSTLRGHSETVYCVCCSPDDKFAISGSEDTMVKIWDLESAK-EVRSLVGHTSDIFAVAVTPDGSKVISSGD-DTQVKVWSLESGEELASLH-GHSESVRIVTVSPDGLTIVSGSEDATFKIW 292
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Nematostella
Match: EDO33297 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSL6])

HSP 1 Score: 102.449 bits (254), Expect = 1.711e-23
Identity = 77/300 (25.67%), Postives = 130/300 (43.33%), Query Frame = 3 
Query:  516 FNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDV-NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINK-------------------------------------------NGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFW 1271
            +  +  L  H+  + ++K+S+N EWL S+     +K W A           HK  +  V++    +  V+ S+D T++IWDF T K  + L+GH   V C  ++P  +L++SGS D  + +++WD K G+C+ T+  H    T +  N+                                           NG + L A+ D+ +KL+D    K  ++ + GHK  K  +   +         SGS D  +  W + +  EV    D H +++     HP  +I+ASG+  ND   K W
Sbjct:   55 YQLKYTLTGHNKAVSSVKFSHNGEWLASSSADKVIKIWGAYDGKFEKTITGHKLGISDVAWSTDSRHLVSASDDKTLKIWDFATGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--ESVRIWDVKTGKCLKTLPAHSDPVTAVHFNRDGALIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCVFANFSVTGGKWIVSGSEDHKVYIWNLQS-KEVVQKLDGHSDVVLCCACHPTENIIASGALENDKTIKIW 350

HSP 2 Score: 62.7734 bits (151), Expect = 1.810e-10
Identity = 51/216 (23.61%), Postives = 91/216 (42.13%), Query Frame = 3 
Query:  654 VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLK 1301
                H  +V  V F  + +   + S D  ++IW     K E+ + GH   +  VAW      L+S S D  + LK+WD   G+C+ T+  H +       N   N  ++ S D  ++++D++  K  ++    H   V  V ++     L  S S DG    W   +   +  + D  +  +  + + P G  + + + D   K W  ++ G  LK
Sbjct:   60 TLTGHNKAVSSVKFSHNGEWLASSSADKVIKIWGAYDGKFEKTITGHKLGISDVAWSTDSRHLVSASDD--KTLKIWDFATGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVTAVHFNR-DGALIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK-GKCLK 270

HSP 3 Score: 56.6102 bits (135), Expect = 2.136e-8
Identity = 38/158 (24.05%), Postives = 83/158 (52.53%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGV--SFCPSDKKF-VTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            P+ AV +  DG  +++ +  G   +W+  +    +T++   +  +  +K+S N +++++A     +K W  +    +  +  HK+    V  +F  +  K+ V+ S D+ V IW+ Q+ +  + L GH   V C A HP ++++ SG+ ++ + +K+W
Sbjct:  193 PVTAVHFNRDGALIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCVFANFSVTGGKWIVSGSEDHKVYIWNLQSKEVVQKLDGHSDVVLCCACHPTENIIASGALENDKTIKIW 350
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Nematostella
Match: EDO45346 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RTA6])

HSP 1 Score: 102.834 bits (255), Expect = 3.811e-23
Identity = 74/294 (25.17%), Postives = 128/294 (43.54%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANM-NDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSG---------DGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
            + +V + P+ ++L+TG+      +W+            H   I ++K+S +   + SA     V+ W  ++  +  VF+AH  +VR V F    +  +T S+D ++++W     K    L  H   VRC  + P   L++SGS D  + +KLWD  + +C+ T Y        +  + +G        D  +K++DIR +   +Q ++ H   V  V++HP    L ++ S          +G L Y L G           H     S+ +   G   ASGS+D     W  N
Sbjct:   21 VTSVDFNPNMKQLVTGSMDSSLMIWHFKPHMRAYRFVGHKDAILSVKFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTATVRSVDFSGDGQSLLTASDDKSLKVWTVHRQKFLYSLNAHMNWVRCAKFSPDGRLIVSGSDD--KTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKVWDIR-MNKLLQHYQAHTGAVNSVSFHPSGNYLVSASSDTTLKILDLMEGRLFYTLHG-----------HQGPATSVVFSRNGEYFASGSSDEQVMVWKTN 300

HSP 2 Score: 97.4413 bits (241), Expect = 1.725e-21
Identity = 60/243 (24.69%), Postives = 111/243 (45.68%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            +K  I +V ++P G  + + +      LW        T+ +AH   +R++ +S + + L++A D   +K W  +    +    AH + VR   F P  +  V+ S+D T+++WD  +          GG V  V +HP  + + +G  DS   +K+WD +  + +     H      +  + +GN+ ++AS D  +K+ D+   +       GH+     V +    E  FASGS D  ++ W
Sbjct:   59 HKDAILSVKFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTATVRSVDFSGDGQSLLTASDDKSLKVWTVHRQKFLYSLNAHMNWVRCAKFSPDGRLIVSGSDDKTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSGTCIAAGGTDST--VKVWDIRMNKLLQHYQAHTGAVNSVSFHPSGNYLVSASSDTTLKILDLMEGRL-FYTLHGHQGPATSVVFSRNGE-YFASGSSDEQVMVW 297

HSP 3 Score: 80.4925 bits (197), Expect = 5.737e-16
Identity = 56/205 (27.32%), Postives = 93/205 (45.37%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            F+ H+D+V  V F P+ K+ VT S D+++ IW F+ +       GH   +  V + P   L+ S S+D  + ++LW P      +    H +T   +  + +G   LTAS D  +K++ +   K  +     H  + +R A       L  SGS D  +  W   +   V    D     + S+++HP G  +A+G  D   K W
Sbjct:   14 FKGHRDTVTSVDFNPNMKQLVTGSMDSSLMIWHFKPHMRAYRFVGHKDAILSVKFSPSGHLIASASRD--KTVRLWVPSVKGESTVFKAHTATVRSVDFSGDGQSLLTASDDKSLKVWTVHRQKF-LYSLNAH-MNWVRCAKFSPDGRLIVSGSDDKTIKLWDRTSKDCVHTFYDP-GGFVNSVEFHPSGTCIAAGGTDSTVKVW 213
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Nematostella
Match: EDO34865 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN68])

HSP 1 Score: 96.6709 bits (239), Expect = 3.132e-21
Identity = 64/254 (25.20%), Postives = 119/254 (46.85%), Query Frame = 3 
Query:  516 FNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFC-PSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            F    IL+AH   +  + ++ +    ++       K W  A+  +    + HK+ V  ++F  P   K  T S D T ++W+ +T K     RGH  E+ C+A++P  +++ +GS D+    KLWD + G  IST+  H +       N  G   LT S DH + ++D R+ +  +    GH+ ++    ++ +  +   +GS D     W  GT   +G +   HD+ +  + +   G ++A+ S D   + +
Sbjct:   82 FYLFKILRAHILPLTNVAFNKSGTSFITGSYDRTCKVWDTASGEETLTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETGKCYHTYRGHSAEIVCLAFNPQSTVIATGSMDTTA--KLWDVQTGAEISTLSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRSGR-RVHTLIGHRGEISNAQFN-FDCSFIVTGSMDKTCKIWDAGTGKCIGTLR-GHDDEVLDVAFDYTGQLIATASADGTGRVY 330

HSP 2 Score: 92.8189 bits (229), Expect = 5.435e-20
Identity = 70/287 (24.39%), Postives = 127/287 (44.25%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSN-NEEWLVSADDSGFVKYWQANMNDV-NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
            P+  V +   G   ITG+      +W+  +      L+ H   + A+ ++N   + + +       K W A      + ++ H   +  ++F P      T S D T ++WD QT  E   L GH  E+   A++   + LL+GS D    + +WD ++G  + T+  H+   ++   N + ++ +T S D   K++D    K  +   RGH  +V+ VA+  Y   L A+ S DG    +   T   +  +E  H+  I  + ++  G  L + S+D   + W  N
Sbjct:   94 PLTNVAFNKSGTSFITGSYDRTCKVWDTASGEETLTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETGKCYHTYRGHSAEIVCLAFNPQSTVIATGSMDTTAKLWDVQTGAEISTLSGHSAEIISCAFNSTGTQLLTGSFD--HTVSVWDTRSGRRVHTLIGHRGEISNAQFNFDCSFIVTGSMDKTCKIWDAGTGKC-IGTLRGHDDEVLDVAF-DYTGQLIATASADGTGRVYNALTHHCLSKLE-GHEGEISKITFNAQGTRLLTASSDKTARLWDPN 375

HSP 3 Score: 74.7146 bits (182), Expect = 3.980e-14
Identity = 61/239 (25.52%), Postives = 97/239 (40.59%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            I  + + P    + TG+      LW+  T    + L  H   I +  +++    L++      V  W       V+    H+  +    F       VT S D T +IWD  T K    LRGH  EV  VA+     L+ + S D     ++++     C+S +  H+   + I  N  G   LTAS D   +L+D    K  +QV  GH  ++   A++ Y   +  +GS D     W
Sbjct:  180 IVCLAFNPQSTVIATGSMDTTAKLWDVQTGAEISTLSGHSAEIISCAFNSTGTQLLTGSFDHTVSVWDTRSGRRVHTLIGHRGEISNAQFNFDCSFIVTGSMDKTCKIWDAGTGKCIGTLRGHDDEVLDVAFDYTGQLIATASADGTG--RVYNALTHHCLSKLEGHEGEISKITFNAQGTRLLTASSDKTARLWDPNTGKC-LQVLEGHTDEIFSCAFN-YDGDIIITGSKDNTCRLW 414
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Medaka
Match: WDR33 (WD repeat domain 33 [Source:NCBI gene;Acc:101171438])

HSP 1 Score: 530.791 bits (1366), Expect = 6.427e-174
Identity = 256/480 (53.33%), Postives = 327/480 (68.12%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAE---LENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIP----GLSGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRKAV R+TIDYN SV   ++ R W+R +    AIQPD    + L PP   ++NPMN V  K VRTSTNK KCP++ + WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W  G + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E   + +I  M   E++              E E+S K   P     + GL+  ME     +  +  + K+    ++ IP  FQ  WA  K
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIRHLQNRLWQRDHRDLRAIQPDAGCYNDLVPPIGMQNNPMNAVTTKFVRTSTNKVKCPVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHTGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDVEPNSMASIPGMGIPEQL----------KAAMEQEQSNKDAAPDVEMSIPGLDWGMEEVMGRDSKKVPQKKV--PYAKPIPAQFQQAWAENK 512
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Medaka
Match: WDR33 (WD repeat domain 33 [Source:NCBI gene;Acc:101171438])

HSP 1 Score: 530.791 bits (1366), Expect = 6.427e-174
Identity = 256/480 (53.33%), Postives = 327/480 (68.12%), Query Frame = 3 
Query:  198 GKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAE---LENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIP----GLSGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKK 1616
            GKRMRKAV R+TIDYN SV   ++ R W+R +    AIQPD    + L PP   ++NPMN V  K VRTSTNK KCP++ + WTP+GRRL+TGASSGEFTLWNGLTFNFETILQAHD+ +RAM WS+N+ W+++AD  G+VKYWQ+NMN+V +FQAHK+++R  SF P+D KF TCS+D TVRIWDF    EER+LRGHG +V+CV WHP K L++SGSKDSQQP+K WDPK G+ ++T++ HK+T  ++  N NGNW LTAS+DH  KLFDIRNLK E+QVFRGHKK+   VAWHP HE LFASG  DG+LL+W  G + EVG +E AH+ +IWSL WHP+GHIL SGSND  +KFWTRNRPGD ++D      L  +  +     D E   + +I  M   E++              E E+S K   P     + GL+  ME     +  +  + K+    ++ IP  FQ  WA  K
Sbjct:   45 GKRMRKAVNRKTIDYNPSVIRHLQNRLWQRDHRDLRAIQPDAGCYNDLVPPIGMQNNPMNAVTTKFVRTSTNKVKCPVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHTGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDVEPNSMASIPGMGIPEQL----------KAAMEQEQSNKDAAPDVEMSIPGLDWGMEEVMGRDSKKVPQKKV--PYAKPIPAQFQQAWAENK 512
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Medaka
Match: wdr5 (WD repeat domain 5 [Source:NCBI gene;Acc:101166483])

HSP 1 Score: 104.76 bits (260), Expect = 5.126e-24
Identity = 79/287 (27.53%), Postives = 133/287 (46.34%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKS-TCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHK--KDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGS--NDFATKFW 1271
            + +V ++P G  L + ++     +W      FE  +  H   I  + WS++   LVSA D   +K W  N    +   + H + V   +F P     V+ S D +VRIWD +T K  + L  H   V  V ++   SL++S S D     ++WD  +G+C+ T+    +   + +  + NG + L A+ D+ +KL+D    K  ++ + GHK  K  I   +         SGS D  +  W + T   V  ++  H +++ S   HP  +I+AS +  ND   K W
Sbjct:   48 VSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVNSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL--CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQ-GHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 2 Score: 71.2478 bits (173), Expect = 7.368e-13
Identity = 60/239 (25.10%), Postives = 102/239 (42.68%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGG-EVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGIN---KNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGS 1118
            +K  I  V W+ D   L++ +      +W+  +      L+ H  ++    ++     +VS      V+ W       +    AH D V  V F       V+ S D   RIWD  + +  + L       V  V + P    +L+ + D+   LKLWD   G+C+ T   HK+    I  N     G W ++ S+D+ + +++++  K  +Q  +GH   VI  A HP  E + AS +
Sbjct:   86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVNSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT--LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQT-KEIVQKLQGHTDVVISTACHP-TENIIASAA 320

HSP 3 Score: 55.0694 bits (131), Expect = 1.662e-7
Identity = 38/158 (24.05%), Postives = 82/158 (51.90%), Query Frame = 3 
Query:  426 PIYAVCWTPDGRRLITGASSGEFTLWNGLTFN-FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGV--SFCPSDKKF-VTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLW 884
            P+ AV +  DG  +++ +  G   +W+  +    +T++   +  +  +K+S N +++++A     +K W  +    +  +  HK+    +  +F  +  K+ V+ S DN V IW+ QT +  + L+GH   V   A HP ++++ S + ++ + +KLW
Sbjct:  173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Medaka
Match: POC1A (POC1 centriolar protein A [Source:NCBI gene;Acc:101161307])

HSP 1 Score: 100.138 bits (248), Expect = 9.748e-22
Identity = 62/243 (25.51%), Postives = 114/243 (46.91%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            +K  + +V ++P G  + + +      LW        T  +AH   +R + +S++ + LV+A +   +K W  +    +  F  H + VR   F P D+  V+CS+D T+++WD  + +  +    H G    V +HP  + + + S DS   +KLWD +  + +    VH      +  +  GN+ +T S D  +K+ D+   K  +    GH+  V  VA+    +  F+SG  D  ++ W
Sbjct:   59 HKDAVTSVQFSPSGHMVASASRDKTVRLWVPSIKADSTEFRAHTAAVRCVNFSDDGQTLVTASNDKTIKVWTVHRQKFLFSFNQHVNWVRCAKFSPDDRLIVSCSDDKTIKLWDKNSRECIQSFFEHAGYANHVDFHPSGTCIAAASTDSS--VKLWDIRTNKMLQHYQVHSGAVNSLSFHPAGNFLITTSSDSTVKILDLLEGKL-LYTLHGHQSSVTCVAFSRTGD-YFSSGGADEQVMVW 297

HSP 2 Score: 76.6406 bits (187), Expect = 3.130e-14
Identity = 70/305 (22.95%), Postives = 109/305 (35.74%), Query Frame = 3 
Query:  522 FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN---DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDS----------------------------------------QQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSG---------DGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
             E   + H   + ++ +S N + + +      V  W  NM        F+ HKD+V  V F PS     + S D TVR+W      +    R H   VRCV +      L++ S D                                          + +KLWD  + ECI + + H      +  + +G     AS D  +KL+DIR  K  +Q ++ H   V  +++HP    L  + S          +G LLY L G           H + +  + +   G   +SG  D     W  N
Sbjct:   10 LERHFKGHRGAVTSVDFSCNMKQIATGSVDSCVMIW--NMKPQMRAYRFEGHKDAVTSVQFSPSGHMVASASRDKTVRLWVPSIKADSTEFRAHTAAVRCVNFSDDGQTLVTASNDKTIKVWTVHRQKFLFSFNQHVNWVRCAKFSPDDRLIVSCSDDKTIKLWDKNSRECIQSFFEHAGYANHVDFHPSGTCIAAASTDSSVKLWDIRTNKM-LQHYQVHSGAVNSLSFHPAGNFLITTSSDSTVKILDLLEGKLLYTLHG-----------HQSSVTCVAFSRTGDYFSSGGADEQVMVWKSN 300
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Medaka
Match: POC1A (POC1 centriolar protein A [Source:NCBI gene;Acc:101161307])

HSP 1 Score: 100.138 bits (248), Expect = 1.074e-21
Identity = 62/243 (25.51%), Postives = 114/243 (46.91%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            +K  + +V ++P G  + + +      LW        T  +AH   +R + +S++ + LV+A +   +K W  +    +  F  H + VR   F P D+  V+CS+D T+++WD  + +  +    H G    V +HP  + + + S DS   +KLWD +  + +    VH      +  +  GN+ +T S D  +K+ D+   K  +    GH+  V  VA+    +  F+SG  D  ++ W
Sbjct:   59 HKDAVTSVQFSPSGHMVASASRDKTVRLWVPSIKADSTEFRAHTAAVRCVNFSDDGQTLVTASNDKTIKVWTVHRQKFLFSFNQHVNWVRCAKFSPDDRLIVSCSDDKTIKLWDKNSRECIQSFFEHAGYANHVDFHPSGTCIAAASTDSS--VKLWDIRTNKMLQHYQVHSGAVNSLSFHPAGNFLITTSSDSTVKILDLLEGKL-LYTLHGHQSSVTCVAFSRTGD-YFSSGGADEQVMVW 297

HSP 2 Score: 76.6406 bits (187), Expect = 3.091e-14
Identity = 70/305 (22.95%), Postives = 109/305 (35.74%), Query Frame = 3 
Query:  522 FETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN---DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDS----------------------------------------QQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSG---------DGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
             E   + H   + ++ +S N + + +      V  W  NM        F+ HKD+V  V F PS     + S D TVR+W      +    R H   VRCV +      L++ S D                                          + +KLWD  + ECI + + H      +  + +G     AS D  +KL+DIR  K  +Q ++ H   V  +++HP    L  + S          +G LLY L G           H + +  + +   G   +SG  D     W  N
Sbjct:   10 LERHFKGHRGAVTSVDFSCNMKQIATGSVDSCVMIW--NMKPQMRAYRFEGHKDAVTSVQFSPSGHMVASASRDKTVRLWVPSIKADSTEFRAHTAAVRCVNFSDDGQTLVTASNDKTIKVWTVHRQKFLFSFNQHVNWVRCAKFSPDDRLIVSCSDDKTIKLWDKNSRECIQSFFEHAGYANHVDFHPSGTCIAAASTDSSVKLWDIRTNKM-LQHYQVHSGAVNSLSFHPAGNFLITTSSDSTVKILDLLEGKLLYTLHG-----------HQSSVTCVAFSRTGDYFSSGGADEQVMVWKSN 300
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Planmine SMEST
Match: SMESG000053685.1 (SMESG000053685.1)

HSP 1 Score: 1490.71 bits (3858), Expect = 0.000e+0
Identity = 789/789 (100.00%), Postives = 789/789 (100.00%), Query Frame = 3 
Query:   57 MSAISTINSSELNYHNIGFQNNNDESLIRSMDFKXXXXXXXXXXXXXGKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEMENAPTXXXXXXXXXXXXGAVSRTIPKLFQSNWANKKSTPAVYANEPPIVFPPNXXXXXXXXXXXXXXXXXXXXXXXFTNPMQAPINHRLPPHEIPFNPPHFKEEPKPPSIDENSFRMMRAPMNVGPRASFRPPRIPNMPTNIRDSFQNYSNQPPIYRNLFPDFRSDGPQIGNFDFHEPKFHQNNHQNFMPFPSHGDFNHPQNNRQMRPFRPEFNSQDDQNRNEFMRHRSVLNASRRGRYXXXXXXXXXXXXXXXXXXXEEASENPFEPSKSTGSSKSFIPLPQKHDDQQNNRNKNRVGNRPNQNW 2423
            MSAISTINSSELNYHNIGFQNNNDESLIRSMDFKNDSMDDSMSTNMDGKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEMENAPTEEDLEDKESKLKGAVSRTIPKLFQSNWANKKSTPAVYANEPPIVFPPNPVATIMPTMPPIIAIPPPVRPPIFTNPMQAPINHRLPPHEIPFNPPHFKEEPKPPSIDENSFRMMRAPMNVGPRASFRPPRIPNMPTNIRDSFQNYSNQPPIYRNLFPDFRSDGPQIGNFDFHEPKFHQNNHQNFMPFPSHGDFNHPQNNRQMRPFRPEFNSQDDQNRNEFMRHRSVLNASRRGRYSSHQHQQQSHRQQQQQSFHEEASENPFEPSKSTGSSKSFIPLPQKHDDQQNNRNKNRVGNRPNQNW
Sbjct:    1 MSAISTINSSELNYHNIGFQNNNDESLIRSMDFKNDSMDDSMSTNMDGKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLTPPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSENEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEMENAPTEEDLEDKESKLKGAVSRTIPKLFQSNWANKKSTPAVYANEPPIVFPPNPVATIMPTMPPIIAIPPPVRPPIFTNPMQAPINHRLPPHEIPFNPPHFKEEPKPPSIDENSFRMMRAPMNVGPRASFRPPRIPNMPTNIRDSFQNYSNQPPIYRNLFPDFRSDGPQIGNFDFHEPKFHQNNHQNFMPFPSHGDFNHPQNNRQMRPFRPEFNSQDDQNRNEFMRHRSVLNASRRGRYSSHQHQQQSHRQQQQQSFHEEASENPFEPSKSTGSSKSFIPLPQKHDDQQNNRNKNRVGNRPNQNW 789
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Planmine SMEST
Match: SMESG000024482.1 (SMESG000024482.1)

HSP 1 Score: 100.138 bits (248), Expect = 7.993e-22
Identity = 72/286 (25.17%), Postives = 123/286 (43.01%), Query Frame = 3 
Query:  417 NKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVN-VFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            +K  +  V + P+  +L +G       +WN            H+  I ++K+S   + + SA     V+ W  ++   + VF+AH  +VR V     + + VT S+D T+++W     K    L  H   VRCV +     L+ S S D  + +KLWD    ECI T   H      +  + NG++  +   D ++ ++DIR +   +Q +  H   V  V++HP    L +S       +Y L+  +  +      H+  I    +   G + ASG  D     W
Sbjct:   13 HKDKVTCVDFNPNSSQLASGGIDSCLMIWNFKPQTRAYRFVGHEDAILSVKFSPTGQLVASASRDKTVRLWVPSIKGESLVFRAHTATVRSVDISCDNLEMVTGSDDKTIKVWKMHRQKFSYSLNEHKNWVRCVRFSSDGQLIASSSDD--KTIKLWDRHNQECIHTFQEHGGFVPSLAFHPNGSYIASGGTDSHVNIWDIR-MNKLLQHYTSHTSPVNAVSFHPSGNFLISSSDDSSMKIYDLL--EGRLLYTVQGHEGPILGTAFSHCGEMFASGGADHQVFLW 293

HSP 2 Score: 77.411 bits (189), Expect = 1.703e-14
Identity = 48/200 (24.00%), Postives = 89/200 (44.50%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYW-QANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNL 1025
            + +V  + D   ++TG+      +W      F   L  H   +R +++S++ + + S+ D   +K W + N   ++ FQ H   V  ++F P+     +   D+ V IWD +  K  +    H   V  V++HP  + L+S S DS   +K++D   G  + T+  H+        +  G  F +   DH + L+    L
Sbjct:  101 VRSVDISCDNLEMVTGSDDKTIKVWKMHRQKFSYSLNEHKNWVRCVRFSSDGQLIASSSDDKTIKLWDRHNQECIHTFQEHGGFVPSLAFHPNGSYIASGGTDSHVNIWDIRMNKLLQHYTSHTSPVNAVSFHPSGNFLISSSDDSS--MKIYDLLEGRLLYTVQGHEGPILGTAFSHCGEMFASGGADHQVFLWQAGQL 298

HSP 3 Score: 68.9366 bits (167), Expect = 6.784e-12
Identity = 53/206 (25.73%), Postives = 87/206 (42.23%), Query Frame = 3 
Query:  657 FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPK-AGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            F+ HKD V  V F P+  +  +   D+ + IW+F+         GH   +  V + P   L+ S S+D  + ++LW P   GE +     H +T   + I+ +    +T S D  IK++ +   K    +     K+ +R         L AS S D  +  W       +   ++ H   + SL +HP G  +ASG  D     W
Sbjct:   10 FKGHKDKVTCVDFNPNSSQLASGGIDSCLMIWNFKPQTRAYRFVGHEDAILSVKFSPTGQLVASASRD--KTVRLWVPSIKGESL-VFRAHTATVRSVDISCDNLEMVTGSDDKTIKVWKMHRQKFSYSL--NEHKNWVRCVRFSSDGQLIASSSDDKTIKLWDRHNQECIHTFQE-HGGFVPSLAFHPNGSYIASGGTDSHVNIW 209

HSP 4 Score: 50.8322 bits (120), Expect = 3.333e-6
Identity = 43/166 (25.90%), Postives = 73/166 (43.98%), Query Frame = 3 
Query:  783 LRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFWTRN 1280
             +GH  +V CV ++P  S L SG  DS   L +W+ K          H+     +  +  G    +AS+D  ++L+ + ++K E  VFR H   V  V           +GS D  +  W +       ++ + H N +  + +   G ++AS S+D   K W R+
Sbjct:   10 FKGHKDKVTCVDFNPNSSQLASGGIDS--CLMIWNFKPQTRAYRFVGHEDAILSVKFSPTGQLVASASRDKTVRLW-VPSIKGESLVFRAHTATVRSVDI-SCDNLEMVTGSDDKTIKVWKMHRQKFSYSLNE-HKNWVRCVRFSSDGQLIASSSDDKTIKLWDRH 170
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Planmine SMEST
Match: SMESG000010494.1 (SMESG000010494.1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.909e-21
Identity = 66/248 (26.61%), Postives = 111/248 (44.76%), Query Frame = 3 
Query:  531 ILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDVNV-FQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASGSNDFATKFW 1271
            ++  H   +R + +S + E+ ++  D   +K W  +   + +    H   VRGV          +C  D TV+ WD +  K  R   GH   V C+  HP   LL++G +DS   +++WD +    +  +  H+     +    N    ++ S D  ++L+D+R  KT+  V   HKK V  V  HP  +  F SGS DG   + L   + +       H+ II ++  +   ++  SG ND    FW
Sbjct:  132 VVSGHTGWVRCISFSPDNEYFITGSDDRMLKIWNVDNGKLRLSLTGHVSGVRGVKISHRHPYVFSCGEDKTVKCWDLEQNKVIRHYHGHTSAVYCLDMHPDLDLLMTGGRDS--VVRVWDMRTKINVHILSGHRDAVASVRCQSNLPEVISGSHDATVRLWDLRAAKTQ-SVLTNHKKAVRSVFIHPITDH-FMSGSADGIKQFSL--PEGQFMQNMKGHNTIINAVTVNE-NNVAVSGGNDGTLYFW 372

HSP 2 Score: 85.1149 bits (209), Expect = 3.993e-17
Identity = 62/239 (25.94%), Postives = 103/239 (43.10%), Query Frame = 3 
Query:  429 IYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMNDV-NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW 1142
            +  + ++PD    ITG+      +WN         L  H + +R +K S+   ++ S  +   VK W    N V   +  H  +V  +   P     +T   D+ VR+WD +T     +L GH   V  V        ++SGS D+   ++LWD +A +  S +  HK     + I+   + F++ S D  IK F +   +  MQ  +GH   +  V  +     +  SG  DG L +W
Sbjct:  140 VRCISFSPDNEYFITGSDDRMLKIWNVDNGKLRLSLTGHVSGVRGVKISHRHPYVFSCGEDKTVKCWDLEQNKVIRHYHGHTSAVYCLDMHPDLDLLMTGGRDSVVRVWDMRTKINVHILSGHRDAVASVRCQSNLPEVISGSHDAT--VRLWDLRAAKTQSVLTNHKKAVRSVFIHPITDHFMSGSADG-IKQFSLPEGQF-MQNMKGHNTIINAVTVN--ENNVAVSGGNDGTLYFW 372
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Planmine SMEST
Match: SMESG000054739.1 (SMESG000054739.1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.929e-20
Identity = 73/242 (30.17%), Postives = 111/242 (45.87%), Query Frame = 3 
Query:  651 NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW-LVGTDMEVGAVEDAH--DNIIWS---------------------------LDWHPMG--HILASGSNDFATKFWTRN 1280
            +V + H+ S+  V F P    FV+ S D T++IWD+++   ER LRGH   V+ +A+ P   LL S S D Q  +KLWD     C+ T+  H    + +    +G+  L+AS+D  IKL+++      +Q F GH  D +RV    +  +L AS S D ++  W +   + +    E  H    I+W                            LD + M   H+LASGS D   + W  N
Sbjct:   69 HVLKGHRASITCVRFHPLYNVFVSGSEDATIKIWDYESGDYERTLRGHTNHVQDLAFDPSGKLLASCSADMQ--IKLWDFVEFTCVKTLSGHDHNVSGVSFMPSGDHLLSASRDKTIKLWEVSTGYC-VQTFEGH-SDWVRVVKPNFDGSLIASCSNDNSVRVWSMANKECKFDFREHEHVVQCIVWGGQKIHMETNQALLDDKQMTSNGDSSNKLDGYKMSGCHLLASGSRDRTIRLWDTN 306

HSP 2 Score: 63.5438 bits (153), Expect = 2.079e-10
Identity = 46/187 (24.60%), Postives = 76/187 (40.64%), Query Frame = 3 
Query:  450 PDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN-DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIK---------------------------------SLLLSGSKDSQQPLKLWDPKAGECI 908
            P G+ L + ++  +  LW+ + F     L  HD ++  + +  + + L+SA     +K W+ +    V  F+ H D VR V          +CSNDN+VR+W     + +   R H   V+C+ W   K                                  LL SGS+D  + ++LWD   G C+
Sbjct:  127 PSGKLLASCSADMQIKLWDFVEFTCVKTLSGHDHNVSGVSFMPSGDHLLSASRDKTIKLWEVSTGYCVQTFEGHSDWVRVVKPNFDGSLIASCSNDNSVRVWSMANKECKFDFREHEHVVQCIVWGGQKIHMETNQALLDDKQMTSNGDSSNKLDGYKMSGCHLLASGSRD--RTIRLWDTNTGVCL 311

HSP 3 Score: 62.3882 bits (150), Expect = 6.103e-10
Identity = 43/174 (24.71%), Postives = 77/174 (44.25%), Query Frame = 3 
Query:  387 AKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGEC 905
            A+HV      ++  I  V + P     ++G+      +W+  + ++E  L+ H  H++ + +  + + L S      +K W       V     H  +V GVSF PS    ++ S D T+++W+  T    +   GH   VR V  +   SL+ S S D+   +++W     EC
Sbjct:   67 ARHV---LKGHRASITCVRFHPLYNVFVSGSEDATIKIWDYESGDYERTLRGHTNHVQDLAFDPSGKLLASCSADMQIKLWDFVEFTCVKTLSGHDHNVSGVSFMPSGDHLLSASRDKTIKLWEVSTGYCVQTFEGHSDWVRVVKPNFDGSLIASCSNDN--SVRVWSMANKEC 235
[Close]
BLAST of Polyadenylation factor subunit 2 vs. Planmine SMEST
Match: SMESG000035997.1 (SMESG000035997.1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.137e-20
Identity = 73/242 (30.17%), Postives = 111/242 (45.87%), Query Frame = 3 
Query:  651 NVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTDIGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYHETLFASGSGDGALLYW-LVGTDMEVGAVEDAH--DNIIWS---------------------------LDWHPMG--HILASGSNDFATKFWTRN 1280
            +V + H+ S+  V F P    FV+ S D T++IWD+++   ER LRGH   V+ +A+ P   LL S S D Q  +KLWD     C+ T+  H    + +    +G+  L+AS+D  IKL+++      +Q F GH  D +RV    +  +L AS S D ++  W +   + +    E  H    I+W                            LD + M   H+LASGS D   + W  N
Sbjct:  103 HVLKGHRASITCVRFHPLYNVFVSGSEDATIKIWDYESGDYERTLRGHTNHVQDLAFDPSGKLLASCSADMQ--IKLWDFVEFTCVKTLSGHDHNVSGVSFMPSGDHLLSASRDKTIKLWEVSTGYC-VQTFEGH-SDWVRVVKPNFDGSLIASCSNDNSVRVWSMANKECKFDFREHEHVVQCIVWGGQKIHMETNQALLDDKQMTSNGDSSNKLDGYKMSGCHLLASGSRDRTIRLWDTN 340

HSP 2 Score: 63.929 bits (154), Expect = 2.099e-10
Identity = 46/191 (24.08%), Postives = 78/191 (40.84%), Query Frame = 3 
Query:  438 VCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMND-VNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIK---------------------------------SLLLSGSKDSQQPLKLWDPKAGECI 908
            + + P G+ L + ++  +  LW+ + F     L  HD ++  + +  + + L+SA     +K W+ +    V  F+ H D VR V          +CSNDN+VR+W     + +   R H   V+C+ W   K                                  LL SGS+D  + ++LWD   G C+
Sbjct:  157 LAFDPSGKLLASCSADMQIKLWDFVEFTCVKTLSGHDHNVSGVSFMPSGDHLLSASRDKTIKLWEVSTGYCVQTFEGHSDWVRVVKPNFDGSLIASCSNDNSVRVWSMANKECKFDFREHEHVVQCIVWGGQKIHMETNQALLDDKQMTSNGDSSNKLDGYKMSGCHLLASGSRD--RTIRLWDTNTGVCL 345

HSP 3 Score: 62.3882 bits (150), Expect = 5.945e-10
Identity = 43/174 (24.71%), Postives = 77/174 (44.25%), Query Frame = 3 
Query:  387 AKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEFTLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQ-ANMNDVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGHGGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGEC 905
            A+HV      ++  I  V + P     ++G+      +W+  + ++E  L+ H  H++ + +  + + L S      +K W       V     H  +V GVSF PS    ++ S D T+++W+  T    +   GH   VR V  +   SL+ S S D+   +++W     EC
Sbjct:  101 ARHV---LKGHRASITCVRFHPLYNVFVSGSEDATIKIWDYESGDYERTLRGHTNHVQDLAFDPSGKLLASCSADMQIKLWDFVEFTCVKTLSGHDHNVSGVSFMPSGDHLLSASRDKTIKLWEVSTGYCVQTFEGHSDWVRVVKPNFDGSLIASCSNDN--SVRVWSMANKEC 269
The following BLAST results are available for this feature:
BLAST of Polyadenylation factor subunit 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
WDR331.004e-17554.66WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
WDR336.015e-9665.52WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
WDR332.246e-8463.96WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
WDR331.860e-6763.25WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
WDR5B6.938e-2426.46WD repeat domain 5B [Source:HGNC Symbol;Acc:HGNC:1... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pfs-21.671e-15956.72Polyadenylation Factor Subunit homolog [Source:Un... [more]
pfs-28.494e-9557.85Polyadenylation Factor Subunit homolog [Source:Un... [more]
wdr-5.35.844e-2526.21WD repeat-containing protein wdr-5.3 [Source:UniP... [more]
wdr-5.21.363e-2226.00WD repeat-containing protein wdr-5.2 [Source:UniP... [more]
wdr-5.13.296e-2127.44WD repeat-containing protein wdr-5.1 [Source:UniP... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Wdr332.526e-17552.22gene:FBgn0046222 transcript:FBtr0078713[more]
Wdr332.526e-17552.22gene:FBgn0046222 transcript:FBtr0078714[more]
wds7.493e-2326.48gene:FBgn0040066 transcript:FBtr0308566[more]
wds7.493e-2326.48gene:FBgn0040066 transcript:FBtr0070438[more]
Lis-15.150e-1928.24gene:FBgn0015754 transcript:FBtr0087241[more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
wdr333.966e-17553.44WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-0409... [more]
wdr331.203e-17353.44WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-0409... [more]
wdr332.915e-6562.96WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-0409... [more]
wdr52.094e-2327.18WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-04042... [more]
pafah1b1b1.562e-2125.91platelet-activating factor acetylhydrolase 1b, reg... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ntf41.524e-17754.22neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492... [more]
ntf42.098e-17654.22neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492... [more]
ntf46.313e-17554.28neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492... [more]
ntf41.838e-17354.28neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492... [more]
ntf41.388e-8563.64neurotrophin 4 [Source:Xenbase;Acc:XB-GENE-1013492... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Wdr333.341e-17654.66WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:192... [more]
Wdr331.398e-8664.14WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:192... [more]
Wdr331.865e-8463.96WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:192... [more]
Wdr338.393e-6863.25WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:192... [more]
Wdr5b1.158e-2426.25WD repeat domain 5B [Source:MGI Symbol;Acc:MGI:191... [more]
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BLAST of Polyadenylation factor subunit 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8K4P0|WDR33_MOUSE2.337e-17554.66pre-mRNA 3' end processing protein WDR33 OS=Mus mu... [more]
sp|Q9C0J8|WDR33_HUMAN4.822e-17554.66pre-mRNA 3' end processing protein WDR33 OS=Homo s... [more]
sp|U4PCM1|WDR33_CAEEL2.125e-15856.72pre-mRNA 3' end processing protein pfs-2 OS=Caenor... [more]
sp|Q6NLV4|FY_ARATH1.457e-13252.53Flowering time control protein FY OS=Arabidopsis t... [more]
sp|Q7RY68|PFS2_NEUCR4.238e-10142.12Polyadenylation factor subunit 2 OS=Neurospora cra... [more]
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BLAST of Polyadenylation factor subunit 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183MSN40.000e+059.31WD_REPEATS_REGION domain-containing protein OS=Sch... [more]
A0A5K3EGU80.000e+062.70Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A158QTS70.000e+062.70Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A0X3PC800.000e+067.01WD_REPEATS_REGION domain-containing protein OS=Sch... [more]
A0A183P5K10.000e+058.63WD_REPEATS_REGION domain-containing protein OS=Sch... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
WDR335.438e-16053.48WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
WDR331.302e-15953.48WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
POC1B1.829e-2427.19POC1 centriolar protein homolog B [Source:NCBI gen... [more]
POC1B2.182e-2427.19POC1 centriolar protein homolog B [Source:NCBI gen... [more]
POC1B2.808e-2427.19POC1 centriolar protein homolog B [Source:NCBI gen... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
WDR333.735e-17353.00WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
WDR336.054e-17353.00WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:2... [more]
POC1A5.651e-2325.10POC1 centriolar protein A [Source:HGNC Symbol;Acc:... [more]
pafah1b1b1.159e-2227.13platelet-activating factor acetylhydrolase 1b, reg... [more]
taf5l2.152e-2029.52TAF5-like RNA polymerase II, p300/CBP-associated f... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
PFS25.414e-7838.40Integral subunit of the pre-mRNA CPF complex; the ... [more]
TAF51.060e-2026.96Subunit (90 kDa) of TFIID and SAGA complexes; invo... [more]
TUP11.463e-2027.65General repressor of transcription; forms complex ... [more]
PRP44.024e-1826.87Splicing factor; component of the U4/U6-U5 snRNP c... [more]
COP14.962e-1623.05Alpha subunit of COPI vesicle coatomer complex; co... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO409861.266e-16558.98Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO497677.377e-2727.30Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO332971.711e-2325.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO453463.811e-2325.17Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO348653.132e-2125.20Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
WDR336.427e-17453.33WD repeat domain 33 [Source:NCBI gene;Acc:10117143... [more]
WDR336.427e-17453.33WD repeat domain 33 [Source:NCBI gene;Acc:10117143... [more]
wdr55.126e-2427.53WD repeat domain 5 [Source:NCBI gene;Acc:101166483... [more]
POC1A9.748e-2225.51POC1 centriolar protein A [Source:NCBI gene;Acc:10... [more]
POC1A1.074e-2125.51POC1 centriolar protein A [Source:NCBI gene;Acc:10... [more]
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BLAST of Polyadenylation factor subunit 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000053685.10.000e+0100.00SMESG000053685.1[more]
SMESG000024482.17.993e-2225.17SMESG000024482.1[more]
SMESG000010494.13.909e-2126.61SMESG000010494.1[more]
SMESG000054739.11.929e-2030.17SMESG000054739.1[more]
SMESG000035997.13.137e-2030.17SMESG000035997.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30009421 ID=SMED30009421|Name=Polyadenylation factor subunit 2|organism=Schmidtea mediterranea sexual|type=transcript|length=2491bp
TTTTGAAAAATATGTCTATTTAATAGTTTGTGTATCTAATACTTATGAAC
GTTAAAATGTCAGCTATTTCAACAATTAACAGTAGTGAATTAAATTATCA
CAATATTGGATTCCAGAATAATAATGATGAGTCTTTAATTAGATCAATGG
ATTTTAAAAACGATTCAATGGATGATTCAATGTCGACAAATATGGATGGG
AAACGAATGCGAAAAGCAGTATTCAGAAGAACAATAGATTATAATTCATC
CGTTGCCCTTTTTATTGAACAAAGGACTTGGAAACGTAAATATTCTAGTA
GATGTGCTATTCAACCTGACATTATGTATCAACACCTGTTAACACCTCCC
ACAGACTACCGGGATAACCCAATGAATTGTGTCTGTGCAAAACATGTCAG
AACGTCTACCAACAAAAATAAATGTCCTATTTATGCAGTGTGTTGGACAC
CCGATGGAAGGAGATTAATAACTGGGGCATCGAGTGGGGAATTCACTCTT
TGGAATGGGTTGACATTCAACTTTGAAACTATTCTTCAAGCACATGATAC
TCACATCCGAGCCATGAAATGGTCAAATAATGAGGAATGGCTCGTTTCAG
CAGACGATTCGGGTTTTGTGAAATATTGGCAAGCCAATATGAATGATGTC
AATGTCTTTCAAGCTCATAAAGACTCTGTCCGTGGTGTAAGTTTTTGTCC
GTCGGATAAGAAATTTGTTACATGTAGTAATGACAATACCGTCAGAATAT
GGGACTTTCAGACCTACAAAGAAGAACGGGTTTTAAGAGGCCACGGAGGT
GAAGTTCGCTGTGTGGCTTGGCATCCTATAAAGTCGCTGTTATTATCTGG
CAGCAAAGATAGTCAGCAACCATTGAAACTCTGGGATCCAAAAGCTGGAG
AATGTATTTCGACTATGTACGTTCATAAAAGTACATGCACCGATATTGGA
ATCAATAAAAACGGAAATTGGTTCCTAACTGCTTCAAAAGATCACTATAT
AAAACTTTTTGATATTCGAAATCTCAAAACAGAAATGCAAGTATTTCGTG
GTCATAAAAAAGACGTTATTCGTGTTGCATGGCATCCATATCATGAAACG
TTATTTGCTAGTGGAAGTGGAGACGGAGCTCTGTTGTATTGGTTGGTTGG
AACAGACATGGAAGTAGGAGCTGTCGAAGATGCTCACGATAACATTATTT
GGAGTTTGGATTGGCATCCTATGGGACATATATTAGCAAGCGGTTCTAAT
GATTTTGCTACTAAATTCTGGACTCGCAACCGTCCTGGAGATGTGTTGAA
AGATAATCTTCAGGAAGAAAAACTTGCAGCTGTTAAATCTGAAGTCACCA
ATAATCCAGACGCCGAATTGGAGAACATAATGAAAATGTCGGAAAATGAA
AAAGTTTTCGATTTCGATATCCACAAATTGAGTTCGACAATTAAAGCGGA
AATCGAAAAAAGTGAAAAATCTGATATTCCCGGTCTTTCAGGTTTGAATG
GAGAAATGGAAAATGCTCCCACAGAAGAAGATTTAGAAGATAAGGAATCG
AAATTGAAAGGAGCAGTTAGTCGAACTATTCCGAAATTATTTCAAAGTAA
TTGGGCCAATAAGAAATCGACTCCTGCAGTTTATGCTAATGAACCTCCTA
TTGTATTTCCTCCCAATCCCGTTGCTACAATCATGCCTACGATGCCTCCG
ATTATCGCAATACCTCCTCCGGTTCGACCTCCGATATTCACTAATCCAAT
GCAGGCTCCTATTAACCACAGATTGCCGCCACATGAAATTCCTTTCAATC
CTCCACATTTCAAGGAGGAACCAAAACCACCATCAATCGATGAAAACTCG
TTCCGAATGATGAGGGCTCCAATGAATGTCGGACCGAGAGCATCGTTTAG
GCCACCACGCATACCAAATATGCCGACCAATATCCGGGATTCCTTTCAAA
ATTACTCCAATCAGCCGCCAATATATCGCAATCTGTTTCCCGATTTCCGA
TCAGATGGACCTCAAATCGGAAATTTCGATTTCCATGAACCGAAATTCCA
CCAGAACAATCATCAAAACTTCATGCCGTTTCCGTCTCACGGGGATTTCA
ATCACCCGCAGAATAATCGTCAGATGCGCCCGTTTCGTCCGGAATTCAAT
AGTCAAGACGATCAGAACAGAAACGAGTTCATGCGTCACAGATCAGTTTT
AAATGCTAGCAGAAGAGGTCGATATTCTTCACATCAGCACCAACAACAAT
CACACAGACAACAGCAGCAGCAATCGTTTCATGAGGAGGCCTCTGAAAAT
CCCTTTGAACCATCCAAATCAACTGGATCATCAAAATCTTTTATACCGCT
ACCGCAGAAACATGATGACCAACAGAACAACAGAAACAAAAATCGTGTCG
GCAACCGGCCGAATCAGAATTGGTAGAGCTGTTATTTCCCAATGTATTTT
TGTGTTATTTAATTAAGTCCATTTTTCAAATGACTTCAAAA
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protein sequence of SMED30009421-orf-1

>SMED30009421-orf-1 ID=SMED30009421-orf-1|Name=SMED30009421-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=794bp
MNVKMSAISTINSSELNYHNIGFQNNNDESLIRSMDFKNDSMDDSMSTNM
DGKRMRKAVFRRTIDYNSSVALFIEQRTWKRKYSSRCAIQPDIMYQHLLT
PPTDYRDNPMNCVCAKHVRTSTNKNKCPIYAVCWTPDGRRLITGASSGEF
TLWNGLTFNFETILQAHDTHIRAMKWSNNEEWLVSADDSGFVKYWQANMN
DVNVFQAHKDSVRGVSFCPSDKKFVTCSNDNTVRIWDFQTYKEERVLRGH
GGEVRCVAWHPIKSLLLSGSKDSQQPLKLWDPKAGECISTMYVHKSTCTD
IGINKNGNWFLTASKDHYIKLFDIRNLKTEMQVFRGHKKDVIRVAWHPYH
ETLFASGSGDGALLYWLVGTDMEVGAVEDAHDNIIWSLDWHPMGHILASG
SNDFATKFWTRNRPGDVLKDNLQEEKLAAVKSEVTNNPDAELENIMKMSE
NEKVFDFDIHKLSSTIKAEIEKSEKSDIPGLSGLNGEMENAPTEEDLEDK
ESKLKGAVSRTIPKLFQSNWANKKSTPAVYANEPPIVFPPNPVATIMPTM
PPIIAIPPPVRPPIFTNPMQAPINHRLPPHEIPFNPPHFKEEPKPPSIDE
NSFRMMRAPMNVGPRASFRPPRIPNMPTNIRDSFQNYSNQPPIYRNLFPD
FRSDGPQIGNFDFHEPKFHQNNHQNFMPFPSHGDFNHPQNNRQMRPFRPE
FNSQDDQNRNEFMRHRSVLNASRRGRYSSHQHQQQSHRQQQQQSFHEEAS
ENPFEPSKSTGSSKSFIPLPQKHDDQQNNRNKNRVGNRPNQNW*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0007059chromosome segregation
GO:0006379mRNA cleavage
GO:0006397mRNA processing
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: cellular component
TermDefinition
GO:0001650fibrillar center
GO:0005581collagen trimer
GO:0005634nucleus
GO:0005654nucleoplasm
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 370..410
e-value: 2.7E-4
score: 30.3
coord: 284..323
e-value: 6.1E-6
score: 35.7
coord: 157..196
e-value: 8.8E-4
score: 28.6
coord: 327..367
e-value: 1.6E-4
score: 31.0
coord: 240..281
e-value: 1.2E-8
score: 44.8
coord: 116..154
e-value: 0.017
score: 24.3
coord: 198..237
e-value: 3.0E-10
score: 50.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 202..237
e-value: 1.8E-6
score: 28.6
coord: 285..323
e-value: 0.0024
score: 18.6
coord: 162..195
e-value: 0.0074
score: 17.1
coord: 380..409
e-value: 0.019
score: 15.8
coord: 244..273
e-value: 4.6E-4
score: 20.9
coord: 331..366
e-value: 0.0047
score: 17.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 291..332
score: 9.205
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 247..273
score: 8.904
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 378..409
score: 10.876
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 334..366
score: 10.676
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 205..246
score: 15.989
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 122..154
score: 9.205
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 164..196
score: 10.074
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 200..328
e-value: 2.4E-37
score: 130.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 329..451
e-value: 2.7E-18
score: 68.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 100..199
e-value: 7.8E-16
score: 59.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..793
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 40..747
NoneNo IPR availableCDDcd00200WD40coord: 128..409
e-value: 1.38956E-63
score: 212.58
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 122..419
score: 46.745
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 121..412