Usp domain-containing protein

Overview
NameUsp domain-containing protein
Smed IDSMED30009355
Length (bp)550
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Usp domain-containing protein (SMED30009355) t-SNE clustered cells

Violin plots show distribution of expression levels for Usp domain-containing protein (SMED30009355) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Usp domain-containing protein (SMED30009355) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Usp domain-containing protein (SMED30009355) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30009355

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
Smed sexual biotypeSMED30009355 Contig55101newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30009355 Contig55101uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
cephalic gangliaSMED30009355 dd_Smed_v4_3228_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30009355 dd_Smed_v4_3228_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30009355 dd_Smed_v4_3228_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30009355 OX_Smed_1.0.17066ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
epidermisSMED30009355 dd_Smed_v4_3228_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Usp domain-containing protein vs. TrEMBL
Match: A0A183VJ70 (Usp domain-containing protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS54 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 9.112e-9
Identity = 40/138 (28.99%), Postives = 73/138 (52.90%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLME-TQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYL 469
            R I+IPID SE  ER  RWYLD+ +K+  + I  + V++P  ++   GL + SP + + T++++  I+   +   +Y+       L A   +++DT     L   I+  +  ++++GN  R +      + GSVS Y+
Sbjct:    9 RVILIPIDGSEHCERAFRWYLDN-MKRETDCIKFVHVIEPVYNTPAIGLTMESPPVPDMTRVMEESIDAGKKLGQKYMHEAKAHKLTAQAFLHVDTKPGSSLVKAISDHKASVILMGN--RGVGAIRRTFLGSVSDYI 143
[Close]
BLAST of Usp domain-containing protein vs. TrEMBL
Match: A0A075A0D9 (Usp domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_04215 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.457e-8
Identity = 39/142 (27.46%), Postives = 72/142 (50.70%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLME-----TQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYL 469
            R IV+P+D SE SER  RWY+++ +K+ N+ +  I +++P  +S   G  L  P L +     T+ ++     C +K ++   C    N+ +   +++D+     +   +     DLV++GN  R +      + GSVS Y+
Sbjct:   29 RTIVLPVDGSEHSERAFRWYMNN-VKRPNDNVKFINIIEPVYTSPGFGAALELPPLPDVSRVMTETVETGKKLCQEKMHQAKAC----NINSQAFLHVDSRPGPAIVKAVQDYNADLVVMGN--RGIGTVRRTFLGSVSDYV 163
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BLAST of Usp domain-containing protein vs. TrEMBL
Match: A0A3S5FGT1 (Usp domain-containing protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS33596 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 3.345e-8
Identity = 33/120 (27.50%), Postives = 64/120 (53.33%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLME--TQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNR 412
            RKIV+P+D SE+SER   WY+D+  +   + + LI V++P ++ +N G    SP L E  ++ +   I+   +   +Y++      +     ++I T    ++  +  ++   +VI+GNR
Sbjct:   25 RKIVMPVDSSENSERAFYWYVDNMFRD-GDGLFLIHVVEPSMAGVNYGAASKSPALSEEISRHVAQLIDTGKELGRKYIEFCRNRQVPVKFTLHIGTKPGQQIVRIAEELGAHMVIVGNR 143
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BLAST of Usp domain-containing protein vs. TrEMBL
Match: A0A0R3U2V2 (Usp domain-containing protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS832 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.803e-8
Identity = 36/140 (25.71%), Postives = 73/140 (52.14%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLM---ETQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYL 469
            R+++ PID S++ +R  +WY +  L+K N+ +  + V++P  ++   GL + SP LM    T++++  I    +   +Y+     EN+E    +++DT     +       + D+++IG+  R +      + GSVS Y+
Sbjct:    5 RRVLFPIDASDNCQRAFKWY-EVNLRKPNDLVYFVHVIEPVYTTPAIGLAMESPPLMVDDMTRVMEESIAAGKKLGQKYMQMAKDENIECKAFLHVDTKPGAAIVKSATDHKADIIVIGS--RGLGAIKRTFLGSVSDYI 141
[Close]
BLAST of Usp domain-containing protein vs. TrEMBL
Match: A0A0R3W6C3 (Usp domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS5735 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.175e-8
Identity = 37/140 (26.43%), Postives = 73/140 (52.14%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLM---ETQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYL 469
            R ++ PID SE+ ER  +WY ++ L+K ++ +  + V++P  ++   GL + SP LM    T+I++  I    +   +Y+    + NL+    +++DT     +       + D+++IG+  R +      + GSVS Y+
Sbjct:    5 RNVLFPIDASENCERAFKWY-EANLRKPDDLVFFVHVIEPVYTTPAIGLAMESPPLMVDDMTRIMEESIAAGKKIGQKYMQMAKESNLDCKAFLHVDTKAGAAIVKSAVDHKADIIVIGS--RGLGAIKRTFLGSVSDYI 141
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BLAST of Usp domain-containing protein vs. Planmine SMEST
Match: SMESG000022897.1 (SMESG000022897.1)

HSP 1 Score: 300.442 bits (768), Expect = 1.313e-105
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 2 
Query:    2 MKNTNAIGKLLXXXXXXXXXRKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMNGLFLPSPLLMETQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYLXXXXXXXXXXXPQWEPN 520
            MKNTNAIGKLLSFSSSSFVSRKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMNGLFLPSPLL ETQIIDHWINNCL KAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMS GGYHYFGSVSKYLVHHCHCAVCVVPQWEPN
Sbjct:    1 MKNTNAIGKLLSFSSSSFVSRKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMNGLFLPSPLLTETQIIDHWINNCLLKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSSGGYHYFGSVSKYLVHHCHCAVCVVPQWEPN 173
[Close]
BLAST of Usp domain-containing protein vs. Planmine SMEST
Match: SMESG000016283.1 (SMESG000016283.1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.037e-14
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLME--TQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGG---YHYFGSVSKYL 469
            R I+IPID SE S+R  RWY+ + +K+ N+ ++ I V++P  ++   G+  P P++++  +++++  IN   +   E++       LE    +++DT     L       Q D++IIGNR     G G     + GSVS ++
Sbjct:    4 RSIMIPIDSSEHSKRAFRWYIKN-MKQPNDLVLFIHVVEPVYATPAVGMMEPPPIVLDDMSRMMEDAINEGKKLGQEFMHEAKDTGLEPKAFIHVDTKPGAALVKSAKDHQADVIIIGNR-----GVGTLRRTFLGSVSDHI 139
[Close]
BLAST of Usp domain-containing protein vs. Planmine SMEST
Match: SMESG000020955.1 (SMESG000020955.1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.683e-10
Identity = 38/144 (26.39%), Postives = 78/144 (54.17%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSMN-GLFLPSPLLMETQIIDHWINNCLQKAYE----YLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGG---YHYFGSVSKYL 469
            R IVIPID SE +ER + WY+++ +K H+  + ++ +++P  +S + GL + + +L  ++  +  I   + K  +    Y+  L  +  +    + +D+N+ + +  V ++ + D+V++ NR     G G     + GSVS Y+
Sbjct:   12 RVIVIPIDNSEYTERTVDWYVENIMKPHD-MVHMVNIVEPIFNSFSAGLAMEAAILTMSEDAETKIKKQIDKGKQLVKRYIHELRDKGGKGKGYIRVDSNVGEAIVKVCHEHKADIVLLSNR-----GEGIIRRTFLGSVSDYV 149
[Close]
BLAST of Usp domain-containing protein vs. Planmine SMEST
Match: SMESG000020954.1 (SMESG000020954.1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.545e-9
Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVS-SMNGLF----LPSPLLMETQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYL 469
            R I+IPID  ++S+R L WYLD+ +K  N+ + +I V+KPK + S  GL     L +P+      +   I +  +    Y++ L+    + +  + I   +   +  V N+   D +II    RK S    + FGS+S Y+
Sbjct:    9 RIIIIPIDNRDASKRSLAWYLDNMMKP-NDTVHIIYVIKPKYNLSTVGLVYKISLATPIGNSDSKLHKRIEDGKELVRSYINELTTRGAKGTGYIRIHPKVGQTVVDVCNEHLGDYIIITK--RKKSSFKENLFGSISHYV 146
[Close]
BLAST of Usp domain-containing protein vs. Planmine SMEST
Match: SMESG000035960.1 (SMESG000035960.1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.455e-8
Identity = 36/139 (25.90%), Postives = 73/139 (52.52%), Query Frame = 2 
Query:   62 RKIVIPIDFSESSERGLRWYLDSFLKKHNEQIILITVLKPKVSSM---NGLFLPSPLLMETQIIDHWINNCLQKAYEYLDCLSKENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFGSVSKYL 469
            R I++P+DFSE+SER   WY   F ++ N+ + LI V+    +S+   +   + S      +I+   +    +  ++YLD   +++++A   V+I +   + +  +  + + + ++IGNR   +S       GSVS+Y+
Sbjct:   27 RIILMPVDFSENSERAFNWYHTEFHRE-NDILFLIHVVNSSGTSVSYDSSSKIGSNTNEFNEIMQEQLETGKKVGHKYLDRCKEKSIKAKFTVHIGSKPGEHIVRLTKEHKINTIVIGNRA--ISNFRRTILGSVSEYV 162
The following BLAST results are available for this feature:
BLAST of Usp domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183VJ709.112e-928.99Usp domain-containing protein OS=Trichobilharzia r... [more]
A0A075A0D91.457e-827.46Usp domain-containing protein OS=Opisthorchis vive... [more]
A0A3S5FGT13.345e-827.50Usp domain-containing protein OS=Protopolystoma xe... [more]
A0A0R3U2V23.803e-825.71Usp domain-containing protein OS=Mesocestoides cor... [more]
A0A0R3W6C34.175e-826.43Usp domain-containing protein OS=Taenia asiatica O... [more]
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BLAST of Usp domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Usp domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000022897.11.313e-10598.27SMESG000022897.1[more]
SMESG000016283.11.037e-1429.58SMESG000016283.1[more]
SMESG000020955.11.683e-1026.39SMESG000020955.1[more]
SMESG000020954.11.545e-929.79SMESG000020954.1[more]
SMESG000035960.12.455e-825.90SMESG000035960.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30009355 ID=SMED30009355|Name=Usp domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=550bp
AATGAAAAATACGAATGCAATTGGAAAACTTTTAAGTTTTTCTTCATCGA
GTTTCGTGTCCAGAAAAATCGTCATTCCTATAGACTTCAGTGAAAGCAGC
GAACGAGGATTGCGGTGGTATTTGGATTCCTTTTTGAAGAAACACAACGA
GCAAATAATTCTCATCACGGTTTTGAAACCGAAAGTTTCTTCAATGAATG
GGTTGTTTCTACCGTCACCATTGTTGATGGAGACCCAAATAATTGACCAT
TGGATAAATAATTGTCTACAAAAGGCTTATGAATATTTGGATTGTCTGAG
CAAAGAAAATCTGGAAGCTTCGTTATTGGTGTATATCGACACAAACATTT
GTGATAAATTGACCTCGGTCATCAATCAAATCCAACCCGATTTGGTTATA
ATCGGAAACAGACCAAGAAAGATGTCGGGTGGCGGATATCACTATTTTGG
TAGTGTATCAAAATATCTAGTACATCATTGTCATTGCGCAGTTTGCGTTG
TACCCCAATGGGAACCTAATTGAGATTCGTGTCAATTTGTGTTCTTTTAT
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protein sequence of SMED30009355-orf-1

>SMED30009355-orf-1 ID=SMED30009355-orf-1|Name=SMED30009355-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=174bp
MKNTNAIGKLLSFSSSSFVSRKIVIPIDFSESSERGLRWYLDSFLKKHNE
QIILITVLKPKVSSMNGLFLPSPLLMETQIIDHWINNCLQKAYEYLDCLS
KENLEASLLVYIDTNICDKLTSVINQIQPDLVIIGNRPRKMSGGGYHYFG
SVSKYLVHHCHCAVCVVPQWEPN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000418head
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR006015Universal_stress_UspA
IPR006016UspA
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: biological process
TermDefinition
GO:0006950response to stress
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006015Universal stress protein A familyPRINTSPR01438UNVRSLSTRESScoord: 20..38
score: 30.53
coord: 146..168
score: 29.74
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 19..169
e-value: 4.5E-19
score: 71.2
IPR006016UspAPFAMPF00582Uspcoord: 21..168
e-value: 5.3E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR46100:SF4coord: 21..167
NoneNo IPR availablePANTHERPTHR46100FAMILY NOT NAMEDcoord: 21..167
NoneNo IPR availableCDDcd00293USP_Likecoord: 22..167
e-value: 2.48692E-16
score: 69.321
NoneNo IPR availableSUPERFAMILYSSF52402Adenine nucleotide alpha hydrolases-likecoord: 21..168