CCDC66 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30009144 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 10
Homology
BLAST of CCDC66 domain-containing protein vs. Ensembl Human
Match: CCDC66 (coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]) HSP 1 Score: 54.6842 bits (130), Expect = 1.092e-6 Identity = 151/535 (28.22%), Postives = 242/535 (45.23%), Query Frame = 3 Query: 1236 GLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRL-ELA--GHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPIT-EDQGVQTDN-----YVLRENRSRPFEEHN-PYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQ-RHKKCENQHISDQDKEN----YEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTK-----PY-NSSRQVAIVQEASKSPEISNDWWTDTNHEI--IRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQIPSHPT--QRQNTILKQLSDIREGLLMKQKEIETSL 2765 L D +Q+ EE ++R KQ+E Q+AI Q+EEK KK+LE E+ + +QEEE R+ +E+ ++ QY E +KQK E L L +T +RA + ++LK+ QR+ ELA GHDT +L L D++++ E N+ N + EI +Y + +D GVQTD+ + E+ E + P +++ K+ + T+ K +N R + + +++ K+ K ++ R W + K K+Y+P S++ P Q+ RE K +R +L V+ N N G LSQ R E H S Q+ E+ + V + L +S+ + V Q T+ P NSS + + S E+S+ ++++H I +RT +I D P S +T + Y +Q+ Q +L S RDP P+ RQ ILK LS++R+GLL KQKE+E+SL Sbjct: 413 ALLDPAQI--EERDRRRQKQLEHQKAITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQKQY--EEDILKQKQKEEIMTLKTNEL-FQTMQRAQELAQRLKQEQRIRELAQKGHDTSRLIKNLGV--------DTIQM--EYNASNISNSRHDSDEISGKMNTYMNSTTSKKDTGVQTDDLNIGIFTNAESHCGSLMERDITNCSSPEISAELIGQFSTKKNKQELTQDKGASLEKENN--RCNDQCNQFTRIEKQTKHMKKYPKRPDWNINKPPKRYIPASEKYPKQL--QKQREEKKVRRQMELLHLVEKN---------NPGHLSQNRGISPEIFHSSHQETESKLRWHLVKKEEEPLNIHSFSKERSPSSPVPVVKNRTQQTQNTLHLPLKNSSYERENLISGSNQTELSSG-ISESSHFIPYVRTNEIY---YLDPDAPLSGPSTQDPQ----YQNSQDCGQKRQLFDSDC-----------VRDPLLN-PNMVKNRDRQQAILKGLSELRQGLLQKQKELESSL 899
BLAST of CCDC66 domain-containing protein vs. Ensembl Human
Match: CCDC66 (coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]) HSP 1 Score: 53.9138 bits (128), Expect = 1.702e-6 Identity = 151/535 (28.22%), Postives = 242/535 (45.23%), Query Frame = 3 Query: 1236 GLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRL-ELA--GHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPIT-EDQGVQTDN-----YVLRENRSRPFEEHN-PYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQ-RHKKCENQHISDQDKEN----YEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTK-----PY-NSSRQVAIVQEASKSPEISNDWWTDTNHEI--IRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQIPSHPT--QRQNTILKQLSDIREGLLMKQKEIETSL 2765 L D +Q+ EE ++R KQ+E Q+AI Q+EEK KK+LE E+ + +QEEE R+ +E+ ++ QY E +KQK E L L +T +RA + ++LK+ QR+ ELA GHDT +L L D++++ E N+ N + EI +Y + +D GVQTD+ + E+ E + P +++ K+ + T+ K +N R + + +++ K+ K ++ R W + K K+Y+P S++ P Q+ RE K +R +L V+ N N G LSQ R E H S Q+ E+ + V + L +S+ + V Q T+ P NSS + + S E+S+ ++++H I +RT +I D P S +T + Y +Q+ Q +L S RDP P+ RQ ILK LS++R+GLL KQKE+E+SL Sbjct: 447 ALLDPAQI--EERDRRRQKQLEHQKAITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQKQY--EEDILKQKQKEEIMTLKTNEL-FQTMQRAQELAQRLKQEQRIRELAQKGHDTSRLIKNLGV--------DTIQM--EYNASNISNSRHDSDEISGKMNTYMNSTTSKKDTGVQTDDLNIGIFTNAESHCGSLMERDITNCSSPEISAELIGQFSTKKNKQELTQDKGASLEKENN--RCNDQCNQFTRIEKQTKHMKKYPKRPDWNINKPPKRYIPASEKYPKQL--QKQREEKKVRRQMELLHLVEKN---------NPGHLSQNRGISPEIFHSSHQETESKLRWHLVKKEEEPLNIHSFSKERSPSSPVPVVKNRTQQTQNTLHLPLKNSSYERENLISGSNQTELSSG-ISESSHFIPYVRTNEIY---YLDPDAPLSGPSTQDPQ----YQNSQDCGQKRQLFDSDC-----------VRDPLLN-PNMVKNRDRQQAILKGLSELRQGLLQKQKELESSL 933
BLAST of CCDC66 domain-containing protein vs. Ensembl Mouse
Match: Ccdc66 (coiled-coil domain containing 66 [Source:MGI Symbol;Acc:MGI:2443639]) HSP 1 Score: 52.373 bits (124), Expect = 3.825e-6 Identity = 153/533 (28.71%), Postives = 238/533 (44.65%), Query Frame = 3 Query: 1236 GLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRL-ELA--GHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLR-ENRSRP-----FEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRP-WGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPEN-EVNDGR--LSQRHKKCENQ---HISDQDKENYEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTKPYNSSRQVAIVQEASKSPEISNDWWTDTNHEI--IRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQIPSHPT-----QRQNTILKQLSDIREGLLMKQKEIETSL 2765 L D +Q+ + E ++R KQ+E Q+AI Q+EE KKRLE E+ + +QE E R+ RE+ ++ QY E +KQ+ E L L T +RA + ++LK+ QR+ ELA GHDT +L L G D + +S P E+ SP+ +D GVQTD+ L N + P E+ I P + T + K N+ + N L N + N+ + T+K KL ++P W + K KKYVP S + P + Q+ +E K QR +L V+ N PEN N G L+ H++ E++ H+ + +E + + E + S +R Q T + K + ++ + + +D ++ +H I +RT +I D P SR +T + Y K+ + A+ EL S + RDP +P RQ ILK LS++R+GLL KQKE+ET+L Sbjct: 444 ALLDPAQIEERE--RRRQKQLEHQKAIMAQVEENRRKKRLEEEQRKKEEQELELRLAREREEMQRQY--EEDILKQRQREEIMTLKTNEL-FHTMQRAQELAQRLKQEQRIRELAQKGHDTSRLIQNL------GAQVDYKAFTTISSSHSDP--EETADTSTASPK--------KDTGVQTDDVNLGIFNDALPPCGSVTEKGIRNISSPEISAEFSGQTDIRKENQELS-MNKGTNLDKENSWH--NGQCNQYRRTEKQTKLMKKCPKKPAWNINKPLKKYVPASAKYPAHL--QKEKEEKKVQRQMELLHLVERNN---PENLSQNRGISPLATSHRETESESRLHLIKKVEEPLKTPSVSKERFQTSPAVKNRTQQ--TQSNVLHLPLKNNDYEKETLTLGDGHTK---LSDEMSEPSHFIPYVRTNEIY---YLDPDAPLSRPSTQDNQ----YQKSHDCAREQELFDSD-----------HIRDPLL----NPKLVKNRDRQQAILKGLSELRQGLLQKQKELETNL 920
BLAST of CCDC66 domain-containing protein vs. Ensembl Mouse
Match: Ccdc66 (coiled-coil domain containing 66 [Source:MGI Symbol;Acc:MGI:2443639]) HSP 1 Score: 51.6026 bits (122), Expect = 5.484e-6 Identity = 151/534 (28.28%), Postives = 236/534 (44.19%), Query Frame = 3 Query: 1236 GLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRL-ELA--GHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLR-ENRSRP-----FEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRP-WGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGR----LSQRHKKCENQ---HISDQDKENYEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTKPYNSSRQVAIVQEASKSPEISNDWWTDTNHEI--IRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQIPSHPT-----QRQNTILKQLSDIREGLLMKQKEIETSL 2765 L D +Q+ + E ++R KQ+E Q+AI Q+EE KKRLE E+ + +QE E R+ RE+ ++ QY E +KQ+ E L L T +RA + ++LK+ QR+ ELA GHDT +L L G D + +S P T P +D GVQTD+ L N + P E+ I P + T + K N+ + N L N + N+ + T+K KL ++P W + K KKYVP S + P + Q+ +E K QR +L V+ N PEN ++ R L+ H++ E++ H+ + +E + + E + S +R Q T + K + ++ + + +D ++ +H I +RT +I D P SR +T + Y K+ + A+ EL S + RDP +P RQ ILK LS++R+GLL KQKE+ET+L Sbjct: 288 ALLDPAQIEERE--RRRQKQLEHQKAIMAQVEENRRKKRLEEEQRKKEEQELELRLAREREEMQRQY--EEDILKQRQREEIMTLKTNEL-FHTMQRAQELAQRLKQEQRIRELAQKGHDTSRLIQNL------GAQVDYKAFTTISSSHSDPEETADTSTASPK----------KDTGVQTDDVNLGIFNDALPPCGSVTEKGIRNISSPEISAEFSGQTDIRKENQELS-MNKGTNLDKENSWH--NGQCNQYRRTEKQTKLMKKCPKKPAWNINKPLKKYVPASAKYPAHL--QKEKEEKKVQRQMELLHLVERNN---PEN-LSQNRGISPLATSHRETESESRLHLIKKVEEPLKTPSVSKERFQTSPAVKNRTQQ--TQSNVLHLPLKNNDYEKETLTLGDGHTK---LSDEMSEPSHFIPYVRTNEIY---YLDPDAPLSRPSTQDNQ----YQKSHDCAREQELFDSD-----------HIRDPLL----NPKLVKNRDRQQAILKGLSELRQGLLQKQKELETNL 764
BLAST of CCDC66 domain-containing protein vs. UniProt/SwissProt
Match: sp|A2RUB6|CCD66_HUMAN (Coiled-coil domain-containing protein 66 OS=Homo sapiens OX=9606 GN=CCDC66 PE=1 SV=4) HSP 1 Score: 53.9138 bits (128), Expect = 8.175e-6 Identity = 151/535 (28.22%), Postives = 242/535 (45.23%), Query Frame = 3 Query: 1236 GLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRL-ELA--GHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPIT-EDQGVQTDN-----YVLRENRSRPFEEHN-PYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQ-RHKKCENQHISDQDKEN----YEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTK-----PY-NSSRQVAIVQEASKSPEISNDWWTDTNHEI--IRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQIPSHPT--QRQNTILKQLSDIREGLLMKQKEIETSL 2765 L D +Q+ EE ++R KQ+E Q+AI Q+EEK KK+LE E+ + +QEEE R+ +E+ ++ QY E +KQK E L L +T +RA + ++LK+ QR+ ELA GHDT +L L D++++ E N+ N + EI +Y + +D GVQTD+ + E+ E + P +++ K+ + T+ K +N R + + +++ K+ K ++ R W + K K+Y+P S++ P Q+ RE K +R +L V+ N N G LSQ R E H S Q+ E+ + V + L +S+ + V Q T+ P NSS + + S E+S+ ++++H I +RT +I D P S +T + Y +Q+ Q +L S RDP P+ RQ ILK LS++R+GLL KQKE+E+SL Sbjct: 447 ALLDPAQI--EERDRRRQKQLEHQKAITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQKQY--EEDILKQKQKEEIMTLKTNEL-FQTMQRAQELAQRLKQEQRIRELAQKGHDTSRLIKNLGV--------DTIQM--EYNASNISNSRHDSDEISGKMNTYMNSTTSKKDTGVQTDDLNIGIFTNAESHCGSLMERDITNCSSPEISAELIGQFSTKKNKQELTQDKGASLEKENN--RCNDQCNQFTRIEKQTKHMKKYPKRPDWNINKPPKRYIPASEKYPKQL--QKQREEKKVRRQMELLHLVEKN---------NPGHLSQNRGISPEIFHSSHQETESKLRWHLVKKEEEPLNIHSFSKERSPSSPVPVVKNRTQQTQNTLHLPLKNSSYERENLISGSNQTELSSG-ISESSHFIPYVRTNEIY---YLDPDAPLSGPSTQDPQ----YQNSQDCGQKRQLFDSDC-----------VRDPLLN-PNMVKNRDRQQAILKGLSELRQGLLQKQKELESSL 933
BLAST of CCDC66 domain-containing protein vs. TrEMBL
Match: A0A1I8IT59 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.156e-19 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 2454 HEIIRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKR-----DPFYQ---IPSHPTQRQNTILKQLSDIREGLLMKQKEIETSLSFN 2774 H ++RT+ +LNPA A + LP SRE T RE AR+ Y + NP+ YG + N ++ +A+P R DP + + PT RQ+ IL QLS IR+GLL KQKEIETSLS + Sbjct: 42 HGLVRTSAVLNPATAGKPLPISRETTARELARRAYMRGLNPSHYG---VAMDNFEDAFDADPVARRPEPPDPIFHPGLVKDSPTSRQDAILLQLSTIRQGLLDKQKEIETSLSVS 153
BLAST of CCDC66 domain-containing protein vs. TrEMBL
Match: A0A1I8IDA8 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 8.702e-18 Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 2454 HEIIRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELL----KSQSNNPNSHNAEP--------NKRDPFYQ---IPSHPTQRQNTILKQLSDIREGLLMKQKEIETSLSFN 2774 H ++RT+ +LNPA A + LP SRE T RE AR+ Y + NP+ YG + + +P + EP +DP + + PT RQ+ IL QLS IR+GLL KQKEIETSLS + Sbjct: 42 HGLVRTSAVLNPATAGKPLPISRETTARELARRAYMRGLNPSHYGVAMDNFEDAFDADPVARRPEPPVVEQPTKGGKDPIFHPGLVKDSPTSRQDAILLQLSTIRQGLLDKQKEIETSLSVS 163
BLAST of CCDC66 domain-containing protein vs. TrEMBL
Match: R7TN75 (CCDC66 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_217825 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.636e-17 Identity = 172/623 (27.61%), Postives = 271/623 (43.50%), Query Frame = 3 Query: 1065 VSQSEIKRQQWLTELNEQVAEKERRKLMENLSGNPSE---------SYRTK-MSSNDDI----------------------------NLTHGRGKGLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRLELAGHD-----TRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLRENRSRPFEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKK-YVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQRHKKCENQHISDQDKENYEVNHDTYELKENSYRDDDRVQGQVT-----------YKDTYRQSTKPYN-SSRQVAIVQEASKSPEISNDWWTDTNHEIIRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQ---IPSHPTQRQNTILKQLSDIREGLLMKQKEIE 2756 VS E KR WL EL +Q E +RK E G E +Y+ K + + D I + T+ RG+ + ++ E+ KR K+ + Q+ IR+QIEEK KR ERE+ + + EEE ++ +E+ T E A+ K+KD+ KR ++ +E A+ AA MDK KRL +L+ GHD T+ R L A+ +G + + + D+S R + E T +QG T+N VL R + G V + + N+ T+ + P S K R S + + KK + R WG + +KK V QS RDP Y ++ E+ KQ+R +L +++ R E R S+ H+ QD + Y + LK+ S++ T K R+ Y +S +V + A P +N + +RTTD+L+P+ AD+ +P SRE + +R R+ Y + NPA+YG+ + + + S+ +DP Q + HPT RQ IL+QLS +R GL++KQ+E+E Sbjct: 396 VSAKERKRLLWLQELEQQREEDRQRKAKEKSYGRQDEETHWADKFSNYQPKGLPAQDSIAPPPPNDTAARISSAPVQTMDSTSNKLEDATYLRGQN-TRIDPVTLRELEDKRKKEQQHQDFIRQQIEEKARLKREERERRVREELEEEKQLQKERTHGLTH--REDAKQKEKDEAERKRALEE--AIERAQEAAEMDKHQKRLLKLQQGGHDVSNFETKTPRNMLPAQFNTGTIVEPSHVPGLDSSPR--DVE------------------TRNQGCYTENRVLTPTDQRTARKE---FG-------VQTESDITLGNREETDIEYQGPF--SKKVRIKSGPKDG-----RPKKPVKINERPKWGYQNAAKKKAVKQSARDPHYEQKKQRAEIMKQERQQAML-KMQQEQRRTVTRETAASR-SRSHEPKSPMIPKHQDYDQYARQN----LKDTSHKSQTPPPSVPTKHRSPSPPVPTIKHMIRECDDQYKQTSSRVGGSKYADMDPTYNNSDFI----PFVRTTDLLDPSKADESVPVSREQSAVQRGRKVYQQELNPAKYGKKMANIKDKNESYT-----KDPILQPNLVTEHPTSRQGQILQQLSSLRRGLMLKQRELE 961
BLAST of CCDC66 domain-containing protein vs. TrEMBL
Match: R7TCF8 (CCDC66 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_188864 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.575e-17 Identity = 127/459 (27.67%), Postives = 203/459 (44.23%), Query Frame = 3 Query: 1443 ETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRLELAGHD-----TRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLRENRSRPFEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKK-YVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQRHKKCENQHISDQDKENYEVNHDTYELKENSYRDDDRVQGQVT-----------YKDTYRQSTKPYN-SSRQVAIVQEASKSPEISNDWWTDTNHEIIRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSNNPNSHNAEPNKRDPFYQ---IPSHPTQRQNTILKQLSDIREGLLMKQKEIE 2756 E A+ K+KD+ KR ++ +E A+ AA MDK KRL +L+ GHD T+ R L A+ +G + + + D+S R + E T++QG T+N VL R + G V + + N+ T+ + P S K R S + + KK + R WG + +KK V QS RDP Y ++ E+ KQ+R +L +++ R E R S+ H+ QD + Y + LK+ S++ T K R+ Y +S +V + A P +N + +RTTD+L+P+ AD+ +P SRE + +R R+ Y + NPA+YG+ + + + S+ +DP Q + HPT RQ IL+QLS +R GL++KQ+E+E Sbjct: 251 EDAKQKEKDEAERKRALEE--AIERAQEAAEMDKHQKRLLKLQQGGHDVSNFETKTPRNMLPAQFNTGTIVEPSHVPGLDSSPR--DVE------------------TQNQGYYTENRVLTPTDQRTARKE---FG-------VQTESDITLGNREETDIEYQGPF--SKKVRIKSGPKDG-----RPKKPVKINERPKWGYQNAAKKKAVKQSARDPHYEQKKQRAEIMKQERQQAML-KMQQEQRRTVTRETAASR-SRSHEPKSPMIPKHQDYDQYARQN----LKDTSHKSQTPPPSVPTKHRSPSPPVPTIKHMIRECDDQYKQTSSRVGGSKYADMDPTYNNSDFI----PFVRTTDLLDPSKADESVPVSREQSAVQRGRKVYQQELNPAKYGKKMANIKDKNESYT-----KDPILQPNLVTEHPTSRQGQILQQLSSLRRGLMLKQRELE 655
BLAST of CCDC66 domain-containing protein vs. TrEMBL
Match: A0A267GCM5 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig009772g1 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.845e-15 Identity = 52/122 (42.62%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 2454 HEIIRTTDILNPALADQILPFSRENTGRERARQGYYKNQNPAQYGELLKSQSN----NPNSHNAEP--------NKRDPFYQ---IPSHPTQRQNTILKQLSDIREGLLMKQKEIETSLSFN 2774 H ++RT+ +LNPA A + LP SRE T RE AR+ Y + NP+ YG + + + +P + EP +DP + + PT RQ+ IL QLS IR+GLL KQKEIETSLS + Sbjct: 890 HGLVRTSAVLNPATAGKPLPISRETTARELARRAYMRGLNPSHYGVAMDNFEDAFDADPVARRPEPPVVEQPTKGGKDPIFHPGLVKDSPTSRQDAILLQLSTIRQGLLDKQKEIETSLSVS 1011
BLAST of CCDC66 domain-containing protein vs. Planmine SMEST
Match: SMESG000019367.1 (SMESG000019367.1) HSP 1 Score: 1655.19 bits (4285), Expect = 0.000e+0 Identity = 823/831 (99.04%), Postives = 824/831 (99.16%), Query Frame = 3 Query: 72 MPVLKFETKIINGKPNISFGSEQPKVPLKKSDYKFKNQKFPLRANSSTNTVPNETQLKNQPKISYENELFSRKKSSDHIIKPQKISENSEIPSDRNSNDKINNIHNYRRSLKQTATKESLFNFLKDDAKNEKFSQRKPDSSDEYARNNLHVKPDSLTEDDIDEVMKQIVLENKHLLSEEQLVDVLAKLYLDAKISKKQKVEIHQIPNNVVDRKPQKSTEQHFELPKQEENHSIYSKLEEKQNIDRLPNNYPPAASGLTALQKKQLQWDKERKEMAEISSYNPWGKPGCGAPTKTSVETRQTDNIYSPKPVSQTITNSQLEPQKNYFIPQENVSQSEIKRQQWLTELNEQVAEKERRKLMENLSGNPSESYRTKMSSNDDINLTHGRGKGLADLSQMSQEEIIQKRSKQMEQQEAIRKQIXXXXXXXXXXXXXNAQLDQEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRLELAGHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLRENRSRPFEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQRHKKCENQHISDQDKENYEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTKPYNSSRQVAIVQEASKSPEISNDWWTDTNHEIIRTTDILNPALADQILPFSRENTGRERARQGYYK 2564 MPVLKFETKIINGKPNISFGSEQPKVPLKKSDYKFKNQKFPLRANSSTN VPNETQLKNQPKISYENELFSRKKSSDHIIK QKISENSEIPSDRNSNDKINNIHNYRRSLKQTATKESLFNFLKDDAKNEKFS RKPDSSDEYARNNLHVK DSLTEDDIDEVMKQIVLENKHLLSEEQLVDVLAKLYLDAKISKKQKVEIHQIPNNVVDRKPQKSTEQHFELPKQEENHSIYSKLEEKQNIDRLPNNYP AASGLTALQKKQLQWDKERKEMAEISSYNPWGKPGCGAPTKTSVETRQTDNIYSPKPVSQTITNSQLEPQKNYFIPQENVSQSEI+RQQWLTELNEQVAEKERRKLMENLSGNPSESYRTKMSSNDDINLTHGRGKGLADLSQMSQEEIIQKRSKQMEQQEAIRKQIEEKEFKKRLEREKNAQLD EEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRLELAGHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLRENRSRPFEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQRHKKCENQHISDQDKENYEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTKPYNSSRQVAIVQEA KSPEISNDWWTDTNHEIIRTTDILNPALADQILPFSRENTGRERARQGYYK Sbjct: 1 MPVLKFETKIINGKPNISFGSEQPKVPLKKSDYKFKNQKFPLRANSSTNAVPNETQLKNQPKISYENELFSRKKSSDHIIKTQKISENSEIPSDRNSNDKINNIHNYRRSLKQTATKESLFNFLKDDAKNEKFSHRKPDSSDEYARNNLHVKQDSLTEDDIDEVMKQIVLENKHLLSEEQLVDVLAKLYLDAKISKKQKVEIHQIPNNVVDRKPQKSTEQHFELPKQEENHSIYSKLEEKQNIDRLPNNYPAAASGLTALQKKQLQWDKERKEMAEISSYNPWGKPGCGAPTKTSVETRQTDNIYSPKPVSQTITNSQLEPQKNYFIPQENVSQSEIERQQWLTELNEQVAEKERRKLMENLSGNPSESYRTKMSSNDDINLTHGRGKGLADLSQMSQEEIIQKRSKQMEQQEAIRKQIEEKEFKKRLEREKNAQLDHEEENRILREKLKLDTQYLSETARIKQKDDESGKRLAQQRLQLETAERAALMDKKLKRLQRLELAGHDTRQLRAGLIAEQMSGRLGDSLELRSEDNSFRQPNFEKPTYEIIPSPRSYFQHPITEDQGVQTDNYVLRENRSRPFEEHNPYIGPPSHRHQVVDSTKLIKHNKSATETNNRKPLKPSNKQRPSSSASNKSQLTKKVKKLEPVEARRPWGMKKNSKKYVPQSKRDPFYAVSQETREVHKQQRVNRILAQVKANMDRIPENEVNDGRLSQRHKKCENQHISDQDKENYEVNHDTYELKENSYRDDDRVQGQVTYKDTYRQSTKPYNSSRQVAIVQEARKSPEISNDWWTDTNHEIIRTTDILNPALADQILPFSRENTGRERARQGYYK 831 The following BLAST results are available for this feature:
BLAST of CCDC66 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of CCDC66 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of CCDC66 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 1
BLAST of CCDC66 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of CCDC66 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of CCDC66 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30009144 ID=SMED30009144|Name=CCDC66 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3032bpback to top protein sequence of SMED30009144-orf-1 >SMED30009144-orf-1 ID=SMED30009144-orf-1|Name=SMED30009144-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=905bp MPVLKFETKIINGKPNISFGSEQPKVPLKKSDYKFKNQKFPLRANSSTNTback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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