Hepatoma derived growth factor protein

Overview
NameHepatoma derived growth factor protein
Smed IDSMED30009142
Length (bp)3809
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Hepatoma derived growth factor protein (SMED30009142) t-SNE clustered cells

Violin plots show distribution of expression levels for Hepatoma derived growth factor protein (SMED30009142) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Hepatoma derived growth factor protein (SMED30009142) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Hepatoma derived growth factor protein (SMED30009142) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30009142

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 4

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30009142SMESG000037796.1 SMESG000057565.1 SMESG000057564.1 dd_Smed_v4_2842_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30009142SMESG000037796.1 SMESG000057565.1 SMESG000057564.1 dd_Smed_v4_2842_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30009142SMESG000057565.1 SMESG000057564.1 SMESG000037796.1 dd_Smed_v6_2842_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cholinergic neuronSMED30009142SMESG000057565.1 SMESG000057564.1 SMESG000037796.1 dd_Smed_v6_2842_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Human
Match: PSIP1 (PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527])

HSP 1 Score: 102.064 bits (253), Expect = 1.312e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Human
Match: PSIP1 (PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527])

HSP 1 Score: 102.064 bits (253), Expect = 1.329e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Human
Match: PSIP1 (PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527])

HSP 1 Score: 102.064 bits (253), Expect = 1.329e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Human
Match: PSIP1 (PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527])

HSP 1 Score: 103.99 bits (258), Expect = 3.312e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Human
Match: PSIP1 (PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527])

HSP 1 Score: 103.99 bits (258), Expect = 3.312e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Celegans
Match: C06A5.3 (pep chromosome:WBcel235:I:5986492:5990581:1 gene:WBGene00015501.1 transcript:C06A5.3a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C06A5.3)

HSP 1 Score: 51.9878 bits (123), Expect = 3.110e-6
Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGAD 335
            +  GD I+AK+KGF  WPA+V     D   P  +IP+ F+GT E  F+ P     Y   N+     P+ +  FN+ + EI   + + Q  AD
Sbjct:   13 FQPGDLIWAKMKGFPPWPAKVLERSED--APARRIPVMFFGTLETSFMKPNDLSDY-LPNRLIHEIPRKQKDFNKAVQEIRKAAGL-QTDAD 100
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Celegans
Match: C06A5.3 (pep chromosome:WBcel235:I:5986443:5990581:1 gene:WBGene00015501.1 transcript:C06A5.3b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C06A5.3)

HSP 1 Score: 51.9878 bits (123), Expect = 3.305e-6
Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGAD 335
            +  GD I+AK+KGF  WPA+V     D   P  +IP+ F+GT E  F+ P     Y   N+     P+ +  FN+ + EI   + + Q  AD
Sbjct:   13 FQPGDLIWAKMKGFPPWPAKVLERSED--APARRIPVMFFGTLETSFMKPNDLSDY-LPNRLIHEIPRKQKDFNKAVQEIRKAAGL-QTDAD 100
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Celegans
Match: C06A5.3 (pep chromosome:WBcel235:I:5986492:5990581:1 gene:WBGene00015501.1 transcript:C06A5.3b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C06A5.3)

HSP 1 Score: 51.9878 bits (123), Expect = 3.305e-6
Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGAD 335
            +  GD I+AK+KGF  WPA+V     D   P  +IP+ F+GT E  F+ P     Y   N+     P+ +  FN+ + EI   + + Q  AD
Sbjct:   13 FQPGDLIWAKMKGFPPWPAKVLERSED--APARRIPVMFFGTLETSFMKPNDLSDY-LPNRLIHEIPRKQKDFNKAVQEIRKAAGL-QTDAD 100
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Zebrafish
Match: psip1a (PC4 and SFRS1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-104])

HSP 1 Score: 96.6709 bits (239), Expect = 1.549e-20
Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPN-KIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYG 329
            + +GD IFAK+KG+ +WPAR++ +P   V P N K PIFF+GTHE  F+ P   +PY   NK K+GKP  R  FN+G+ EIEN   +   G
Sbjct:    5 FKAGDLIFAKMKGYPHWPARIDEIPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFPY-LTNKDKYGKPNKRKGFNEGLWEIENNPKVELNG 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Zebrafish
Match: hdgfl2 (HDGF like 2 [Source:NCBI gene;Acc:80965])

HSP 1 Score: 94.7449 bits (234), Expect = 2.658e-19
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   48 VPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIV-IPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIEN 305
            +P  +  GD +FAK+KG+ +WPAR+  +    V  PPNKIPIFF+GTHE  F++P   + Y EKN+ ++GKP  R  FN+G+ EI+N
Sbjct:    1 MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFAY-EKNQERFGKPNKRKGFNEGLWEIQN 86
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Zebrafish
Match: hdgfl2 (HDGF like 2 [Source:NCBI gene;Acc:80965])

HSP 1 Score: 94.7449 bits (234), Expect = 3.098e-19
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   48 VPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIV-IPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIEN 305
            +P  +  GD +FAK+KG+ +WPAR+  +    V  PPNKIPIFF+GTHE  F++P   + Y EKN+ ++GKP  R  FN+G+ EI+N
Sbjct:    1 MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFAY-EKNQERFGKPNKRKGFNEGLWEIQN 86
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Zebrafish
Match: hdgfl2 (HDGF like 2 [Source:NCBI gene;Acc:80965])

HSP 1 Score: 94.7449 bits (234), Expect = 3.098e-19
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   48 VPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIV-IPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIEN 305
            +P  +  GD +FAK+KG+ +WPAR+  +    V  PPNKIPIFF+GTHE  F++P   + Y EKN+ ++GKP  R  FN+G+ EI+N
Sbjct:    1 MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFAY-EKNQERFGKPNKRKGFNEGLWEIQN 86
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Zebrafish
Match: psip1b (PC4 and SFRS1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3273])

HSP 1 Score: 92.4337 bits (228), Expect = 2.795e-18
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSC---WPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSA 344
            +  GD +FAK+KG+ +WPAR+     +   P NKIPIFFYGTH   F+ P      WP    NK K+ +   R  F +GM EIEN   +   G   +A
Sbjct:   16 FTPGDVVFAKMKGYPFWPARI----AEGKAPKNKIPIFFYGTHSTTFLFPKDIVHYWP----NKQKYAQANKRGGFEEGMWEIENDPGVGLRGQKKAA 105
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Xenopus
Match: znf711 (zinc finger protein 711 [Source:Xenbase;Acc:XB-GENE-956382])

HSP 1 Score: 105.531 bits (262), Expect = 1.347e-22
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ LP   V PP NK+PIFF+GTHE  F+ P   +PYDE NK K+ KP  R  FN+G+ EIEN   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDELPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYDE-NKEKYAKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Xenopus
Match: znf711 (zinc finger protein 711 [Source:Xenbase;Acc:XB-GENE-956382])

HSP 1 Score: 105.145 bits (261), Expect = 1.844e-22
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ LP   V PP NK+PIFF+GTHE  F+ P   +PYDE NK K+ KP  R  FN+G+ EIEN   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDELPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYDE-NKEKYAKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Xenopus
Match: znf711 (zinc finger protein 711 [Source:Xenbase;Acc:XB-GENE-956382])

HSP 1 Score: 104.76 bits (260), Expect = 2.312e-22
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ LP   V PP NK+PIFF+GTHE  F+ P   +PYDE NK K+ KP  R  FN+G+ EIEN   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDELPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYDE-NKEKYAKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Xenopus
Match: znf711 (zinc finger protein 711 [Source:Xenbase;Acc:XB-GENE-956382])

HSP 1 Score: 104.375 bits (259), Expect = 2.856e-22
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ LP   V PP NK+PIFF+GTHE  F+ P   +PYDE NK K+ KP  R  FN+G+ EIEN   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDELPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYDE-NKEKYAKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Xenopus
Match: hdgfl3 (HDGF like 3 [Source:NCBI gene;Acc:100125195])

HSP 1 Score: 95.1301 bits (235), Expect = 1.798e-21
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 3 
Query:   51 PCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            P  Y +G+ +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P   +PY E  K K+GK   R  FN+G+ EIEN   +
Sbjct:    6 PRDYKAGELVFAKMKGYPHWPARIDELPEGAVKPPANKFPIFFFGTHETAFLGPKDLFPYKE-YKEKFGKSNKRKGFNEGLWEIENNPGV 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Mouse
Match: Psip1 (PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116])

HSP 1 Score: 102.064 bits (253), Expect = 1.043e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Mouse
Match: Psip1 (PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116])

HSP 1 Score: 101.679 bits (252), Expect = 1.079e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Mouse
Match: Psip1 (PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116])

HSP 1 Score: 103.605 bits (257), Expect = 3.117e-22
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Mouse
Match: Hdgfl3 (HDGF like 3 [Source:MGI Symbol;Acc:MGI:1352760])

HSP 1 Score: 97.0561 bits (240), Expect = 3.195e-22
Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 3 
Query:   51 PCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            P +Y +GD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P   +PY E  K K+GK   R  FN+G+ EIEN   +
Sbjct:    6 PREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKE-YKDKFGKSNKRKGFNEGLWEIENNPGV 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Mouse
Match: Hdgfl3 (HDGF like 3 [Source:MGI Symbol;Acc:MGI:1352760])

HSP 1 Score: 96.6709 bits (239), Expect = 4.592e-22
Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 3 
Query:   51 PCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            P +Y +GD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P   +PY E  K K+GK   R  FN+G+ EIEN   +
Sbjct:    6 PREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKE-YKDKFGKSNKRKGFNEGLWEIENNPGV 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. UniProt/SwissProt
Match: sp|Q66T72|PSIP1_FELCA (PC4 and SFRS1-interacting protein OS=Felis catus OX=9685 GN=PSIP1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.176e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. UniProt/SwissProt
Match: sp|Q8MJG1|PSIP1_BOVIN (PC4 and SFRS1-interacting protein OS=Bos taurus OX=9913 GN=PSIP1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.218e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. UniProt/SwissProt
Match: sp|O75475|PSIP1_HUMAN (PC4 and SFRS1-interacting protein OS=Homo sapiens OX=9606 GN=PSIP1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.591e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. UniProt/SwissProt
Match: sp|Q812D1|PSIP1_RAT (PC4 and SFRS1-interacting protein OS=Rattus norvegicus OX=10116 GN=Psip1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.875e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. UniProt/SwissProt
Match: sp|Q99JF8|PSIP1_MOUSE (PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.180e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPARV+ +P   V PP NK+PIFF+GTHE  F+ P   +PY E NK K+GKP  R  FN+G+ EI+N   +
Sbjct:    5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSE-NKEKYGKPNKRKGFNEGLWEIDNNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. TrEMBL
Match: A0A183RYH2 (PWWP domain-containing protein OS=Schistosoma rodhaini OX=6188 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.076e-31
Identity = 63/109 (57.80%), Postives = 79/109 (72.48%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSN 386
            ++ GDK+FAK+KGF  WPARVNPLP D+ IP  K+PIFFYGT++V F+S  +  PY EK K KWGKPK  + F   M+EIE+   IY  G DP AE+FL QFY+FK S+
Sbjct:    3 HSPGDKVFAKIKGFPNWPARVNPLPHDVQIPKGKLPIFFYGTYQVSFVSVKNIVPY-EKFKDKWGKPKPSSQFMAAMNEIESNPGIYMLGEDPRAENFLHQFYDFKPSS 110
[Close]
BLAST of Hepatoma derived growth factor protein vs. TrEMBL
Match: A0A183PCR6 (PWWP domain-containing protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS12151 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.303e-30
Identity = 62/106 (58.49%), Postives = 74/106 (69.81%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFK 377
            ++ GDK+FAK+KGF  WPARVNPLP D+ IP  K+PIFFYGT++V F+S  +  PY EK K KWGKPK    F   M EIE    IY  G DP AE+FL QFY+FK
Sbjct:    3 HSPGDKVFAKIKGFPNWPARVNPLPHDVQIPKGKLPIFFYGTYQVSFVSAKNIVPY-EKFKDKWGKPKPSTQFMTAMKEIEANPGIYMLGEDPRAEEFLLQFYDFK 107
[Close]
BLAST of Hepatoma derived growth factor protein vs. TrEMBL
Match: A0A2H1C662 (PWWP domain protein OS=Fasciola hepatica OX=6192 GN=D915_10041 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.331e-30
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSN 386
            +  GD++FAK+KGF  WPAR+NPLP D+ IP  K+P+FFYGT++V F+ P +  PY EK K KWGKPKS   F   M EIE+   I+  G DP AE FL QFY+F+  N
Sbjct:    3 HRPGDRVFAKIKGFSNWPARINPLPPDVQIPKGKLPVFFYGTYQVSFVPPKNIVPY-EKFKDKWGKPKSSPQFTTAMQEIESNPGIFMLGEDPRAESFLLQFYKFRPGN 110
[Close]
BLAST of Hepatoma derived growth factor protein vs. TrEMBL
Match: A0A504YNI2 (Hepatoma derived growth factor protein OS=Fasciola gigantica OX=46835 GN=FGIG_09877 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.602e-30
Identity = 64/126 (50.79%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSNGQHTTPNKLKSTFENDN 437
            +  GD++FAK+KGF  WPAR+NPLP D+ IP  K+P+FFYGT++V F+ P +  PY EK K KWGKPKS   F   M EIE+   I+  G DP AE FL QFY+F+  +   +T NK +   END 
Sbjct:    3 HRPGDRVFAKIKGFSNWPARINPLPPDVQIPKGKLPVFFYGTYQVSFVPPKNIVPY-EKFKDKWGKPKSSPQFTTAMQEIESNPGIFMLGEDPRAESFLLQFYKFRPGHTLPSTKNKAQEP-ENDR 126
[Close]
BLAST of Hepatoma derived growth factor protein vs. TrEMBL
Match: G4V717 (Putative hepatoma derived growth factor OS=Schistosoma mansoni OX=6183 GN=Smp_125340 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.403e-30
Identity = 64/109 (58.72%), Postives = 78/109 (71.56%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSN 386
            ++ GDK+FAK+KGF  WPARVNPLP D+ IP  K+PIFFYGT++V F+S  +  PY EK K KWGKPK  A F   M+EIE    IY  G DP AE+FL QFY+FK S+
Sbjct:    3 HSPGDKVFAKIKGFPNWPARVNPLPHDVQIPKGKLPIFFYGTYQVSFVSVKNIVPY-EKFKDKWGKPKPSAQFMAAMNEIEANPGIYMLGEDPRAENFLHQFYDFKPSS 110

HSP 2 Score: 68.9366 bits (167), Expect = 7.920e-8
Identity = 26/89 (29.21%), Postives = 55/89 (61.80%), Query Frame = 3 
Query: 2202 DIRSCLMLGNEDYKKCIERFKSLCEMEIDLLSLVKVWQLMDTVKKCRRYKRNEHIKNEAQAVYKRFMEIYNQASKEEIATSQSLLAQYR 2468
            D+++ L+ G+E++ + ++    +  + + L  L + W LMD +KKCRRYK +  ++  AQ  ++ F  +    +KEE++ +Q+L+A ++
Sbjct:  692 DLKTSLIKGHENFVEAVQLLNKVRSIPVRLPQLAEAWDLMDCIKKCRRYKLSSEVREAAQTTFQFFQSLQANTTKEELSKAQALIASHQ 780
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Cavefish
Match: ENSAMXT00000035361.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000680.1:25149:53477:-1 gene:ENSAMXG00000044093.1 transcript:ENSAMXT00000035361.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 93.9745 bits (232), Expect = 4.170e-21
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 3 
Query:   51 PCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            P +Y +GD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P    PY E  K K+GK   R  FN+G+ EIEN   +
Sbjct:    6 PREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKE-YKDKFGKSNKRKGFNEGLWEIENNPGV 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Cavefish
Match: ENSAMXT00000042912.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000680.1:36200:53477:-1 gene:ENSAMXG00000044093.1 transcript:ENSAMXT00000042912.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 92.8189 bits (229), Expect = 6.708e-21
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 3 
Query:   51 PCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            P +Y +GD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P    PY E  K K+GK   R  FN+G+ EIEN   +
Sbjct:    6 PREYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKE-YKDKFGKSNKRKGFNEGLWEIENNPGV 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Cavefish
Match: ENSAMXT00000035815.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000680.1:36607:53562:-1 gene:ENSAMXG00000044093.1 transcript:ENSAMXT00000035815.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 87.8113 bits (216), Expect = 2.833e-20
Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 3 
Query:   57 KYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +++SGD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P    PY E  K K+GK   R  FN+G+ EIEN   +
Sbjct:    4 RFSSGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKEY-KDKFGKSNKRKGFNEGLWEIENNPAV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Cavefish
Match: psip1a (PC4 and SFRS1-interacting protein-like [Source:NCBI gene;Acc:103040307])

HSP 1 Score: 95.9005 bits (237), Expect = 4.625e-20
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPN-KIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            Y  GD IFAK+KG+ +WPAR++ +P   V P N K PIFF+GTHE  F+ P   +PY   NK K+GKP  R  FN+G+ EIEN   +
Sbjct:    5 YKPGDLIFAKMKGYPHWPARIDEVPDGAVKPANIKFPIFFFGTHETAFLGPKDIFPY-LPNKDKYGKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Cavefish
Match: psip1a (PC4 and SFRS1-interacting protein-like [Source:NCBI gene;Acc:103040307])

HSP 1 Score: 95.9005 bits (237), Expect = 6.184e-20
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPN-KIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            Y  GD IFAK+KG+ +WPAR++ +P   V P N K PIFF+GTHE  F+ P   +PY   NK K+GKP  R  FN+G+ EIEN   +
Sbjct:    5 YKPGDLIFAKMKGYPHWPARIDEVPDGAVKPANIKFPIFFFGTHETAFLGPKDIFPY-LPNKDKYGKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010402.1 (pep scaffold:Pmarinus_7.0:GL477087:153717:159376:-1 gene:ENSPMAG00000009421.1 transcript:ENSPMAT00000010402.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 86.2705 bits (212), Expect = 3.444e-19
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 3 
Query:   57 KYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIEN 305
            +Y  GD IFAK+KG+ +WPAR++ +    V PP +K PIFFYGTHE  F+     +PY  + K K+GKP  R  FN+G+ EIEN
Sbjct:    4 EYKPGDLIFAKMKGYPHWPARIDEVAEGAVKPPSSKYPIFFYGTHETAFLGVKDIFPY-LQTKNKYGKPNKRKGFNEGLWEIEN 86
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Nematostella
Match: EDO42006 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2I6])

HSP 1 Score: 78.9518 bits (193), Expect = 8.463e-18
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEI 299
            Y  GD I+AK++G+ +WPAR++    D VIP  K PIFFYGTHE   + P   +PY EK+K K+ KP  R  F + ++EI
Sbjct:    3 YQPGDLIWAKMRGYPHWPARIDLAAKDEVIPAKKYPIFFYGTHETAVMLPKDLFPY-EKHKHKFAKPCKRKGFMEALEEI 81
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Medaka
Match: HDGFL3 (hepatoma-derived growth factor-related protein 3 [Source:NCBI gene;Acc:101175133])

HSP 1 Score: 92.8189 bits (229), Expect = 1.080e-20
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 3 
Query:   51 PCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            P  + +GD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P    PY +  K K+GK   R  FN+G+ EIEN   +
Sbjct:    6 PRDFKAGDLVFAKMKGYPHWPARIDELPDGAVKPPSNKHPIFFFGTHETAFLGPKDLLPYGD-YKEKFGKSNKRKGFNEGLWEIENNPGV 94
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Medaka
Match: ENSORLT00000025330.2 (pep primary_assembly:ASM223467v1:1:16538339:16540560:1 gene:ENSORLG00000020443.2 transcript:ENSORLT00000025330.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 85.1149 bits (209), Expect = 2.344e-19
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPN-KIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            +  GD IFAK+KG+ +WPAR++ +P   V P N K PIFF+GTHE  F+ P   +PY   NK K+ KP  R  FN+G+ EIEN   +
Sbjct:    5 WKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKYPIFFFGTHETAFLGPKDIFPY-LLNKEKYAKPNKRKGFNEGLWEIENNPKV 90
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Medaka
Match: ENSORLT00000021204.3 (HDGF like 2 [Source:NCBI gene;Acc:101158434])

HSP 1 Score: 92.0485 bits (227), Expect = 1.495e-18
Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 3 
Query:   48 VPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIV-IPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIEN 305
            +P  +  GD +FAK+KG+ +WPAR+  +    V  PPNKIPIFF+GTHE  F++    +PY EK + ++GKP  R  FN+G+ EI+N
Sbjct:    1 MPHSFMPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAAKDLFPY-EKYRERYGKPNKRKGFNEGLWEIQN 86
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Medaka
Match: HDGFL3 (hepatoma-derived growth factor-related protein 3 [Source:NCBI gene;Acc:101175133])

HSP 1 Score: 83.9593 bits (206), Expect = 2.977e-18
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPP-NKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTI 317
            + +GD +FAK+KG+ +WPAR++ LP   V PP NK PIFF+GTHE  F+ P    PY +  K K+GK   R  FN+G+ EIEN   +
Sbjct:    3 FKAGDLVFAKMKGYPHWPARIDELPDGAVKPPSNKHPIFFFGTHETAFLGPKDLLPYGD-YKEKFGKSNKRKGFNEGLWEIENNPGV 88
[Close]
BLAST of Hepatoma derived growth factor protein vs. Ensembl Medaka
Match: ENSORLT00000046328.1 (heparin binding growth factor [Source:NCBI gene;Acc:101161288])

HSP 1 Score: 85.8853 bits (211), Expect = 3.526e-18
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIV-IPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAED 350
            Y  GD +FAK+KG+ +WPAR++ LP   V  P NK  +FF+GTHE  F+     +PY+E  K K+GK   R  F +G+ EIEN  ++   G + S +D
Sbjct:   10 YKPGDLVFAKMKGYPHWPARIDELPEGAVKSPSNKYQVFFFGTHETAFLGAKDLFPYEE-CKEKFGKANKRKGFAEGLWEIENNPSVTHEGYESSKKD 106
[Close]
BLAST of Hepatoma derived growth factor protein vs. Planmine SMEST
Match: SMESG000057564.1 (SMESG000057564.1)

HSP 1 Score: 1774.99 bits (4596), Expect = 0.000e+0
Identity = 1093/1114 (98.11%), Postives = 1097/1114 (98.47%), Query Frame = 3 
Query:   42 MKVPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSNGQHTTPNKLKSTFENDNESGVSMDDSSKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXTTEMCVDLKSDEVAEVSNLAQSSKKRQRSGSALSSKENTNCHLSIPNELELNQLETGVTTRKRQASGAXXXXXXXXXXXXXXXXXXXTTVKNDVKEEIKHELNVEQDKECNEENINVDSTNKKDLFKCETLLNSVVKLENNITDVFLSKMLEKEDTEIEKSDESHFSDNSLTKKANPKLRRSLPASKIVEKXXXXXXXXXXXXXXNPEDEDFKPATKTKRLTXXXXXXXXXXINNRKSAPSQPKLKSTSKTPAKRKASKXXXXXXXXXXXXXEEWNAPVDKTKELEEKSKSPQIQRLQLNDTPVXXXXXXXXXXXXXXXXXXFENDQTKCEIQKDVENKKEKSPIKEINIVDENVILEVREIDLKTINSDTKITDEKEVINQIKENQEVILSDNSEKNDKVNEPCQLSNEKGRNNRPKKSKNGKVLDIIDLDDENQDVCEPVKDLLNKSTESPIPQEKIKKVKINLKEMKVSKQNSTKPKQQQTRKRNRKLSSSDSDVEIIXXXXXXXXXXXXXXXXSSESDENGXXXXXXXXXXXXXLQILQNFNVDIRSCLMLGNEDYKKCIERFKSLCEMEIDLLSLVKVWQLMDTVKKCRRYKRNEHIKNEAQAVYKRFMEIYNQASKEEIATSQSLLAQYRHXXXXXXXXXXXTSNKSSGGLVIPISVADMFQXXXXXXXXXXXXXXXXKIESVVTKHITEATDPVPNKNPTSDTQQKCXXXXXXXXXKMRLLSIDLEAKVSDILNKIEKNVEVMNQKSLSHLLPTTDENHLSIELPTKWKSVSEKSTDREKYTAADNSDEDEDDVEAIVRRIEEVPIKLPEPEHLITNNINGNSSALDARIENLFNNSFISSTTPTSATTKDARQKX-XXXXXXXXXXXXXXXXXXXXGKSTSPSRMTTPNQKLESPETIIVLDSDKDTIPTGNESLGFVEIQKDDIEIYDLLGV 3380
            MKVPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSNGQHTTPNKLKSTFENDNESGVSMDDSSKEHLKKSGRKRNKSSSSISIKENKNSNNKIKTTEMCVDLKSDEVAEVSNLAQSSKKRQRSGSALSSKENTNCHLSIPNELELNQLETGVTTRKRQASGASEMSKSEKSRSVSRKRQRSTTVKNDVKEEIKHELNVEQDKECNEENINVDSTNKKDLFKCETLLNSVVKLENNITDVFLSKMLEKEDTEIEKSDESHFSDNSLTKKANPKLRRSLPASKIVEKESDIESD LSIDSDNPEDEDFKPATKTKRLTKKVKISKPKKINNRKSAPSQPKLKSTSKTPAKRKASKLVSDDSLSSLSSVEEWNAPVDKTKELEEKSKSPQIQRLQLNDTPVKESKSKSKEINKSSDKINFENDQTKCEIQKDVENKKEKSPIKEINIVDENVILEVREIDLKTINSDTKITDEKEVINQIKENQEVILSDNSEKNDKVNEPCQLSNEKGRNNRPKKSK+GK+LDIIDLDDENQDVCEPVKDLLNKSTESPIPQEKIKKVKINLKEMKVSKQNSTKPKQQQTRKRNRKLSSSDSDVEIIKREEKPKTKKVKLYEKSSESDENG           DKLQILQNFNVDIRSCLMLGNEDYKKCIERFKSLCEMEIDLLSLVKVWQLMDTVKKCRRYKRNEHIKNEAQAVYKRFMEIYNQASKEEIATSQSLLAQYRHQNNVQNQNVGNTSNKSSGGLVIPISVADMFQNRPFNQSESNNNNKHNKIESVVTKHITEATDPVPNKNPTSDTQQKCIEEEINEEEKMRLLSIDLEAKVSDILNKIEKNVEVMNQKSLSHLLPTTDENHLSIELPTKWKSVSEKSTDREKYTAADNSDEDEDDVEAIVRRIEEVPIKLPEPEHLITNNINGNSSALDARIENLFNNSFISSTTPTSATTKDARQKK   +SS  H+NNNNNSNKNNNGKSTSPSRMTTPNQKLESPETIIVLDSDKDTIPTGNESLGFVEIQKDDIEIYDLLGV
Sbjct:    1 MKVPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEFKRSNGQHTTPNKLKSTFENDNESGVSMDDSSKEHLKKSGRKRNKSSSSISIKENKNSNNKIKTTEMCVDLKSDEVAEVSNLAQSSKKRQRSGSALSSKENTNCHLSIPNELELNQLETGVTTRKRQASGASEMSKSEKSRSVSRKRQRSTTVKNDVKEEIKHELNVEQDKECNEENINVDSTNKKDLFKCETLLNSVVKLENNITDVFLSKMLEKEDTEIEKSDESHFSDNSLTKKANPKLRRSLPASKIVEKESDIESDLLSIDSDNPEDEDFKPATKTKRLTKKVKISKPKKINNRKSAPSQPKLKSTSKTPAKRKASKLVSDDSLSSLSSVEEWNAPVDKTKELEEKSKSPQIQRLQLNDTPVKESKSKSKEINKSSDKINFENDQTKCEIQKDVENKKEKSPIKEINIVDENVILEVREIDLKTINSDTKITDEKEVINQIKENQEVILSDNSEKNDKVNEPCQLSNEKGRNNRPKKSKDGKLLDIIDLDDENQDVCEPVKDLLNKSTESPIPQEKIKKVKINLKEMKVSKQNSTKPKQQQTRKRNRKLSSSDSDVEIIKREEKPKTKKVKLYEKSSESDENG-----KKDKIHDKLQILQNFNVDIRSCLMLGNEDYKKCIERFKSLCEMEIDLLSLVKVWQLMDTVKKCRRYKRNEHIKNEAQAVYKRFMEIYNQASKEEIATSQSLLAQYRHQNNVQNQNVGNTSNKSSGGLVIPISVADMFQNRPFNQSESNNNNKHNKIESVVTKHITEATDPVPNKNPTSDTQQKCIEEEINEEEKMRLLSIDLEAKVSDILNKIEKNVEVMNQKSLSHLLPTTDENHLSIELPTKWKSVSEKSTDREKYTAADNSDEDEDDVEAIVRRIEEVPIKLPEPEHLITNNINGNSSALDARIENLFNNSFISSTTPTSATTKDARQKKSRNSSSRHHNNNNNNSNKNNNGKSTSPSRMTTPNQKLESPETIIVLDSDKDTIPTGNESLGFVEIQKDDIEIYDLLGV 1109
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BLAST of Hepatoma derived growth factor protein vs. Planmine SMEST
Match: SMESG000069102.1 (SMESG000069102.1)

HSP 1 Score: 131.724 bits (330), Expect = 1.317e-33
Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 3 
Query:   60 YNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEF 374
            + SG+K FAKVKGF +WPAR+N LP D+ IP  K PIFFYGTHEV F+S  + +PY EK K+K+   ++   FN G++E+EN STIYQYG DP A  FL+QFY F
Sbjct:    3 FASGEKCFAKVKGFPHWPARINCLPEDVKIPKGKYPIFFYGTHEVCFLSSNAIFPY-EKYKSKFSVARNTVGFNNGLEELENNSTIYQYGIDPKAVKFLSQFYTF 106
[Close]
BLAST of Hepatoma derived growth factor protein vs. Planmine SMEST
Match: SMESG000052118.1 (SMESG000052118.1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.475e-21
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 3 
Query:   69 GDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSR-AHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEF 374
            G K + K+KG+  WPAR+N LP D+ +P  K+PIFFYGTHE+ +      + + EK + K+   K + A FN  + E++   TI+Q G+D  A +FL+QFY+F
Sbjct:    6 GSKCWVKMKGYPPWPARINVLPSDVKLPRGKLPIFFYGTHEISYAKAKDIFDF-EKFRHKYCSYKGKSAKFNDALLEVDENPTIFQLGSDTRAIEFLSQFYKF 107
[Close]
BLAST of Hepatoma derived growth factor protein vs. Planmine SMEST
Match: SMESG000052118.1 (SMESG000052118.1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.434e-21
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 3 
Query:   69 GDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSR-AHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEF 374
            G K + K+KG+  WPAR+N LP D+ +P  K+PIFFYGTHE+ +      + + EK + K+   K + A FN  + E++   TI+Q G+D  A +FL+QFY+F
Sbjct:    6 GSKCWVKMKGYPPWPARINVLPSDVKLPRGKLPIFFYGTHEISYAKAKDIFDF-EKFRHKYCSYKGKSAKFNDALLEVDENPTIFQLGSDTRAIEFLSQFYKF 107
[Close]
BLAST of Hepatoma derived growth factor protein vs. Planmine SMEST
Match: SMESG000052118.1 (SMESG000052118.1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.555e-19
Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 3 
Query:   90 VKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHEVFFISPTSCWPYDEKNKAKWGKPKSR-AHFNQGMDEIENQSTIYQYGADPSAEDFLAQFYEF 374
            +KG+  WPAR+N LP D+ +P  K+PIFFYGTHE+ +      + + EK + K+   K + A FN  + E++   TI+Q G+D  A +FL+QFY+F
Sbjct:    1 MKGYPPWPARINVLPSDVKLPRGKLPIFFYGTHEISYAKAKDIFDF-EKFRHKYCSYKGKSAKFNDALLEVDENPTIFQLGSDTRAIEFLSQFYKF 95
The following BLAST results are available for this feature:
BLAST of Hepatoma derived growth factor protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PSIP11.312e-2251.72PC4 and SFRS1 interacting protein 1 [Source:HGNC S... [more]
PSIP11.329e-2251.72PC4 and SFRS1 interacting protein 1 [Source:HGNC S... [more]
PSIP11.329e-2251.72PC4 and SFRS1 interacting protein 1 [Source:HGNC S... [more]
PSIP13.312e-2251.72PC4 and SFRS1 interacting protein 1 [Source:HGNC S... [more]
PSIP13.312e-2251.72PC4 and SFRS1 interacting protein 1 [Source:HGNC S... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
C06A5.33.110e-634.78pep chromosome:WBcel235:I:5986492:5990581:1 gene:W... [more]
C06A5.33.305e-634.78pep chromosome:WBcel235:I:5986443:5990581:1 gene:W... [more]
C06A5.33.305e-634.78pep chromosome:WBcel235:I:5986492:5990581:1 gene:W... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
psip1a1.549e-2048.35PC4 and SFRS1 interacting protein 1a [Source:ZFIN;... [more]
hdgfl22.658e-1948.28HDGF like 2 [Source:NCBI gene;Acc:80965][more]
hdgfl23.098e-1948.28HDGF like 2 [Source:NCBI gene;Acc:80965][more]
hdgfl23.098e-1948.28HDGF like 2 [Source:NCBI gene;Acc:80965][more]
psip1b2.795e-1840.82PC4 and SFRS1 interacting protein 1b [Source:ZFIN;... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
znf7111.347e-2254.02zinc finger protein 711 [Source:Xenbase;Acc:XB-GEN... [more]
znf7111.844e-2254.02zinc finger protein 711 [Source:Xenbase;Acc:XB-GEN... [more]
znf7112.312e-2254.02zinc finger protein 711 [Source:Xenbase;Acc:XB-GEN... [more]
znf7112.856e-2254.02zinc finger protein 711 [Source:Xenbase;Acc:XB-GEN... [more]
hdgfl31.798e-2148.89HDGF like 3 [Source:NCBI gene;Acc:100125195][more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Psip11.043e-2251.72PC4 and SFRS1 interacting protein 1 [Source:MGI Sy... [more]
Psip11.079e-2251.72PC4 and SFRS1 interacting protein 1 [Source:MGI Sy... [more]
Psip13.117e-2251.72PC4 and SFRS1 interacting protein 1 [Source:MGI Sy... [more]
Hdgfl33.195e-2250.00HDGF like 3 [Source:MGI Symbol;Acc:MGI:1352760][more]
Hdgfl34.592e-2250.00HDGF like 3 [Source:MGI Symbol;Acc:MGI:1352760][more]
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BLAST of Hepatoma derived growth factor protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q66T72|PSIP1_FELCA1.176e-2151.72PC4 and SFRS1-interacting protein OS=Felis catus O... [more]
sp|Q8MJG1|PSIP1_BOVIN1.218e-2151.72PC4 and SFRS1-interacting protein OS=Bos taurus OX... [more]
sp|O75475|PSIP1_HUMAN1.591e-2151.72PC4 and SFRS1-interacting protein OS=Homo sapiens ... [more]
sp|Q812D1|PSIP1_RAT1.875e-2151.72PC4 and SFRS1-interacting protein OS=Rattus norveg... [more]
sp|Q99JF8|PSIP1_MOUSE2.180e-2151.72PC4 and SFRS1-interacting protein OS=Mus musculus ... [more]
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BLAST of Hepatoma derived growth factor protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183RYH25.076e-3157.80PWWP domain-containing protein OS=Schistosoma rodh... [more]
A0A183PCR61.303e-3058.49PWWP domain-containing protein OS=Schistosoma matt... [more]
A0A2H1C6621.331e-3054.13PWWP domain protein OS=Fasciola hepatica OX=6192 G... [more]
A0A504YNI21.602e-3050.79Hepatoma derived growth factor protein OS=Fasciola... [more]
G4V7172.403e-3058.72Putative hepatoma derived growth factor OS=Schisto... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000035361.14.170e-2150.00pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000042912.16.708e-2150.00pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000035815.12.833e-2050.00pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
psip1a4.625e-2050.57PC4 and SFRS1-interacting protein-like [Source:NCB... [more]
psip1a6.184e-2050.57PC4 and SFRS1-interacting protein-like [Source:NCB... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000010402.13.444e-1950.00pep scaffold:Pmarinus_7.0:GL477087:153717:159376:-... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO420068.463e-1847.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Hepatoma derived growth factor protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
HDGFL31.080e-2047.78hepatoma-derived growth factor-related protein 3 [... [more]
ENSORLT00000025330.22.344e-1948.28pep primary_assembly:ASM223467v1:1:16538339:165405... [more]
ENSORLT00000021204.31.495e-1847.13HDGF like 2 [Source:NCBI gene;Acc:101158434][more]
HDGFL32.977e-1848.28hepatoma-derived growth factor-related protein 3 [... [more]
ENSORLT00000046328.13.526e-1842.86heparin binding growth factor [Source:NCBI gene;Ac... [more]
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BLAST of Hepatoma derived growth factor protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000057564.10.000e+098.11SMESG000057564.1[more]
SMESG000069102.11.317e-3358.10SMESG000069102.1[more]
SMESG000052118.15.475e-2142.72SMESG000052118.1[more]
SMESG000052118.16.434e-2142.72SMESG000052118.1[more]
SMESG000052118.13.555e-1942.71SMESG000052118.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30009142 ID=SMED30009142|Name=Hepatoma derived growth factor protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3809bp
CTTACATTAATTTATTTCATATTGTTAAATATTAAATATATATGAAGGTA
CCTTGCAAATATAATTCTGGAGATAAAATTTTTGCAAAAGTTAAGGGATT
TGTTTACTGGCCAGCAAGGGTGAATCCTCTTCCAGTAGATATCGTAATTC
CACCAAATAAAATCCCAATATTCTTTTATGGAACTCATGAAGTGTTTTTT
ATTTCACCTACGTCGTGTTGGCCTTATGATGAAAAGAATAAAGCAAAATG
GGGTAAACCCAAATCTAGAGCTCATTTTAATCAAGGTATGGATGAAATTG
AAAATCAATCTACTATTTATCAATATGGCGCGGATCCAAGCGCGGAAGAT
TTTCTAGCACAGTTTTACGAATTCAAAAGATCAAATGGGCAACATACAAC
CCCAAATAAGCTAAAGAGCACTTTTGAAAATGATAATGAGAGTGGAGTTT
CTATGGATGATTCAAGTAAGGAGCATTTGAAGAAAAGTGGCAGAAAGAGA
AATAAGTCAAGCTCATCAATTAGTATAAAAGAAAATAAAAATAGTAACAA
TAAAATAAAAACGACAGAAATGTGTGTAGATTTAAAATCCGACGAGGTCG
CTGAAGTTTCCAATTTGGCTCAGTCGTCTAAAAAGCGGCAGAGATCGGGG
TCAGCATTGAGTTCCAAGGAAAATACAAATTGCCATCTGAGCATACCGAA
TGAGTTGGAGTTAAACCAATTAGAAACTGGGGTGACAACACGTAAACGAC
AAGCGTCAGGAGCAAGTGAGATGAGCAAATCTGAAAAGTCTAGATCTGTA
TCTAGGAAACGACAACGCAGCACTACAGTGAAAAATGACGTGAAGGAAGA
AATCAAACATGAATTGAATGTTGAACAAGATAAAGAGTGTAATGAGGAAA
ATATTAATGTTGATTCAACTAATAAAAAGGATTTGTTCAAGTGTGAAACG
TTACTGAACTCTGTTGTCAAATTGGAAAATAACATAACAGATGTATTTCT
ATCGAAAATGTTGGAAAAGGAGGACACTGAAATTGAAAAATCAGACGAAA
GTCATTTCTCTGATAATTCATTAACAAAAAAAGCTAATCCTAAACTTCGC
CGTAGCCTTCCAGCCAGCAAGATAGTGGAGAAAGAATCGGATATTGAAAG
TGACTCATTGTCGATAGATTCTGACAATCCAGAAGATGAAGATTTCAAAC
CAGCTACTAAAACGAAACGTTTGACAAAGAAAGTTAAAATTTCAAAACCT
AAAAAAATCAATAATAGAAAATCCGCTCCTTCTCAGCCTAAGTTGAAGTC
TACCAGCAAAACTCCAGCTAAAAGAAAAGCTTCTAAATTGGTTTCAGATG
ATTCCTTGAGTAGTTTGTCATCAGTCGAAGAATGGAATGCTCCTGTTGAT
AAGACGAAGGAATTGGAAGAAAAGTCAAAATCTCCACAAATTCAAAGGTT
GCAATTGAATGATACTCCGGTAAAAGAATCAAAGAGCAAGTCGAAGGAGA
TCAATAAAAGTTCTGATAAAATAAATTTTGAAAATGATCAAACTAAATGT
GAAATTCAAAAGGATGTTGAAAACAAAAAGGAGAAATCACCCATTAAAGA
AATCAATATTGTGGATGAAAATGTTATATTAGAAGTTAGGGAAATTGATC
TCAAAACTATAAATTCAGATACGAAAATCACCGATGAAAAAGAAGTAATA
AATCAAATAAAGGAAAATCAGGAAGTTATTTTATCGGATAATAGTGAAAA
GAATGACAAAGTAAACGAGCCGTGTCAATTGTCAAATGAAAAAGGCCGAA
ACAATCGTCCGAAAAAGAGTAAGAATGGCAAAGTATTGGACATAATAGAT
CTCGACGACGAAAACCAAGATGTCTGTGAACCTGTTAAGGATTTACTAAA
CAAATCGACTGAAAGTCCCATTCCACAAGAAAAGATCAAAAAAGTTAAAA
TAAATCTAAAAGAAATGAAAGTTAGTAAACAAAATTCAACAAAACCGAAA
CAGCAACAAACTAGGAAGCGAAACCGAAAACTATCTTCGTCCGATTCTGA
TGTAGAAATTATCAAAAGAGAGGAGAAACCAAAAACAAAGAAGGTAAAAT
TATACGAGAAAAGTTCTGAGTCAGACGAAAATGGGAAAAAGGATAAAATT
CACGATAAAATACACACGGATAAATTGCAAATTTTACAAAATTTTAATGT
GGACATCCGATCGTGCCTCATGCTAGGTAACGAGGATTACAAGAAGTGCA
TTGAAAGGTTCAAGTCTCTTTGTGAAATGGAAATTGATTTGTTGTCATTG
GTCAAGGTCTGGCAGCTCATGGATACAGTAAAAAAGTGCCGTCGGTACAA
GCGTAATGAGCACATTAAAAATGAAGCCCAAGCAGTTTATAAGCGATTCA
TGGAAATATATAACCAAGCATCGAAAGAAGAAATTGCCACCTCACAATCG
TTGCTTGCGCAATATCGACATCAAAATAATGTTCAGAATCAAAATGTCGG
AAACACATCAAACAAATCCAGTGGCGGATTAGTTATTCCAATATCGGTTG
CTGACATGTTCCAAAATAGGCCTTTTAACCAATCTGAATCCAATAATAAT
AATAAACATAATAAGATAGAATCTGTTGTCACAAAACACATTACTGAAGC
GACTGATCCTGTTCCAAATAAAAATCCAACTTCTGACACCCAGCAAAAGT
GCATTGAAGAAGAAATTAACGAAGAAGAAAAAATGCGCCTTCTTTCAATC
GACCTCGAAGCTAAAGTCAGTGATATTCTCAATAAAATTGAGAAGAATGT
CGAAGTTATGAATCAAAAAAGTCTGTCCCATTTGTTACCGACAACCGATG
AGAATCACTTATCGATCGAATTGCCAACAAAGTGGAAGTCGGTCAGTGAG
AAATCAACTGATAGAGAAAAATACACAGCAGCTGACAACAGTGATGAAGA
TGAGGATGACGTCGAAGCAATTGTTAGACGAATAGAAGAAGTACCGATTA
AGTTGCCGGAACCAGAACATTTGATTACTAATAACATCAATGGAAATTCT
AGCGCTCTTGATGCTAGGATAGAAAATTTATTTAATAATTCATTCATTTC
TTCAACAACGCCAACTTCAGCTACAACTAAAGATGCTCGCCAGAAAAAAT
CCAGAAATTCTTCCTCGAGACATCACAATAATAATAATAATAGTAATAAA
AATAATAACGGGAAAAGCACAAGCCCTTCACGAATGACGACACCCAATCA
AAAATTAGAATCTCCAGAAACGATTATAGTTTTGGATTCAGACAAAGATA
CTATACCGACGGGCAATGAATCACTGGGATTTGTGGAAATTCAGAAAGAT
GACATTGAAATTTACGATTTATTGGGTGTATAGAATAATGGTTCGTATAT
CAGTTATGTCAATTGGACTAATTTTTCTGAGGAAAATAATCATGTGTCTC
TGTCTCCAGGTTATTTATCGAATTAATTCTTTATTGATGCGTAATTGTTC
ATTTATTGAAGAGATTATTACAGTCGATGTATAAATAATTGAAGCTTTAC
AGCAGTTATGAATTGATTGCGCAACGTTTAAAATAATTTATCAGTCTGTG
TCGGAATTCAGCAATCGATCTTGTTGAAACAAAATTTTAAAGCATTACAT
GAAATCAATTTCAGAAGCAAATAATTGGATTGCTTTTTCGAAAACATGAA
TATATTTACAAGATCGTAATTGATCGTTTTAAAACGATCTGAAATTACTT
AACGATATTTAATGATTTAATTTGACATAAAATACGAACGCAAATATTTT
ATATCAAGC
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protein sequence of SMED30009142-orf-1

>SMED30009142-orf-1 ID=SMED30009142-orf-1|Name=SMED30009142-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1114bp
MKVPCKYNSGDKIFAKVKGFVYWPARVNPLPVDIVIPPNKIPIFFYGTHE
VFFISPTSCWPYDEKNKAKWGKPKSRAHFNQGMDEIENQSTIYQYGADPS
AEDFLAQFYEFKRSNGQHTTPNKLKSTFENDNESGVSMDDSSKEHLKKSG
RKRNKSSSSISIKENKNSNNKIKTTEMCVDLKSDEVAEVSNLAQSSKKRQ
RSGSALSSKENTNCHLSIPNELELNQLETGVTTRKRQASGASEMSKSEKS
RSVSRKRQRSTTVKNDVKEEIKHELNVEQDKECNEENINVDSTNKKDLFK
CETLLNSVVKLENNITDVFLSKMLEKEDTEIEKSDESHFSDNSLTKKANP
KLRRSLPASKIVEKESDIESDSLSIDSDNPEDEDFKPATKTKRLTKKVKI
SKPKKINNRKSAPSQPKLKSTSKTPAKRKASKLVSDDSLSSLSSVEEWNA
PVDKTKELEEKSKSPQIQRLQLNDTPVKESKSKSKEINKSSDKINFENDQ
TKCEIQKDVENKKEKSPIKEINIVDENVILEVREIDLKTINSDTKITDEK
EVINQIKENQEVILSDNSEKNDKVNEPCQLSNEKGRNNRPKKSKNGKVLD
IIDLDDENQDVCEPVKDLLNKSTESPIPQEKIKKVKINLKEMKVSKQNST
KPKQQQTRKRNRKLSSSDSDVEIIKREEKPKTKKVKLYEKSSESDENGKK
DKIHDKIHTDKLQILQNFNVDIRSCLMLGNEDYKKCIERFKSLCEMEIDL
LSLVKVWQLMDTVKKCRRYKRNEHIKNEAQAVYKRFMEIYNQASKEEIAT
SQSLLAQYRHQNNVQNQNVGNTSNKSSGGLVIPISVADMFQNRPFNQSES
NNNNKHNKIESVVTKHITEATDPVPNKNPTSDTQQKCIEEEINEEEKMRL
LSIDLEAKVSDILNKIEKNVEVMNQKSLSHLLPTTDENHLSIELPTKWKS
VSEKSTDREKYTAADNSDEDEDDVEAIVRRIEEVPIKLPEPEHLITNNIN
GNSSALDARIENLFNNSFISSTTPTSATTKDARQKKSRNSSSRHHNNNNN
SNKNNNGKSTSPSRMTTPNQKLESPETIIVLDSDKDTIPTGNESLGFVEI
QKDDIEIYDLLGV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000099neuron
PLANA:0000463cholinergic neuron
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR036218HIVI-bd_sf
IPR000313PWWP_dom
IPR021567LEDGF_IBD
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainSMARTSM00293PWWP_4coord: 7..63
e-value: 0.0024
score: 25.7
IPR000313PWWP domainPFAMPF00855PWWPcoord: 7..88
e-value: 9.9E-6
score: 25.9
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 9..65
score: 9.755
IPR035441TFIIS/LEDGF domain superfamilyGENE3DG3DSA:1.20.930.10coord: 707..798
e-value: 6.4E-17
score: 63.0
IPR021567Lens epithelium-derived growth factor, integrase-binding domainPFAMPF11467LEDGFcoord: 710..798
e-value: 5.5E-14
score: 51.8
NoneNo IPR availableGENE3DG3DSA:2.30.30.140coord: 1..93
e-value: 8.0E-18
score: 66.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1016..1075
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..676
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 407..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 947..968
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 661..676
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1038..1072
NoneNo IPR availablePANTHERPTHR12550HEPATOMA-DERIVED GROWTH FACTOR-RELATEDcoord: 6..376
NoneNo IPR availablePANTHERPTHR12550:SF42PC4 AND SFRS1-INTERACTING PROTEINcoord: 6..376
NoneNo IPR availableSUPERFAMILYSSF63748Tudor/PWWP/MBTcoord: 4..93
IPR036218HIV integrase-binding domain superfamilySUPERFAMILYSSF140576HIV integrase-binding domaincoord: 710..782