phosphorylated CTD-interacting factor 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30008994 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Human
Match: PCIF1 (PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]) HSP 1 Score: 400.208 bits (1027), Expect = 2.793e-127 Identity = 222/542 (40.96%), Postives = 306/542 (56.46%), Query Frame = 1 Query: 511 MVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQM---TVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 ++K R P S LPPHP +E R+ L+ KLR + C RE I PP SFNRW+L+ K +D G DP+ PS C+ + SM RE++ +P + + K+ AK L +Y+E+ + L+E R+ASP RK++K NV++T W+R + S +DY+++L ++R C PH+ ++SVE IC K+Y++S EY R+R HL + ++N I + L C+P+ LA P S+ M V I+ K +V + ++ +F KL LY S DD F R+WCLL+RY G G + G Q +LPV VFE L+RLF V+FE FASPLNCYF QYCSAF DTD YFGS GP L+F P++GSFEANPPFCEEL+ V++ E+LL++S LSFIVFIP+WR+PP ALT +E S F RHQ+ L A EHEYR + + E+ ++ H+T V+FLQN+ GF +W PT ERL EL A Y Sbjct: 185 VIKHRGP--SEVLPPHPEVELLRSQLILKLRQHYRELCQQREGIEPPRESFNRWMLERKVVDKGSDPLLPSNCEPVVSPSMFREIMNDIPIRLSRIKFREEAKRLLFKYAEAARRLIESRSASPDSRKVVKWNVEDTFSWLRKDHSASKEDYMDRLEHLRRQCGPHVSAAAKDSVEGICSKIYHISLEYVKRIREKHLAILKENNIS-----------------------------EEVEAPEVEPRLVYCYPVRLAVSAPPMPSVEMHMENNVVCIRY-------KGEMVKV----------SRNYFSKLWLLYRYSCIDDSAFERFLPRVWCLLRRYQMMFGV--GLYEGTGLQGSLPVHVFEALHRLFGVSFECFASPLNCYFRQYCSAFPDTDGYFGSRGPCLDFAPLSGSFEANPPFCEELMDAMVSHFERLLESSPEPLSFIVFIPEWREPPTPALTRMEQSRFKRHQLILPAFEHEYRSGS---------QHICKKEEMHYKAVHNTAVLFLQNDPGFAKWAPTPERLQELSAAY 667 HSP 2 Score: 58.151 bits (139), Expect = 6.864e-8 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 1 Query: 214 AHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL 327 DLPE L++AGW K WS+RENR YY+N+ T SLW++ Sbjct: 37 VQDLPEELVHAGWEKCWSRRENRPYYFNRFTNQSLWEM 74
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Human
Match: PCIF1 (PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]) HSP 1 Score: 205.682 bits (522), Expect = 3.448e-59 Identity = 118/241 (48.96%), Postives = 147/241 (61.00%), Query Frame = 1 Query: 1252 LTPCHPIGLACPCPLFTSLNTQM---TVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIAN 1965 L C+P+ LA P S+ M V I+ K +V + ++ +F KL LY S DD F R+WCLL+RY G G + G Q +LPV VFE L+RLF V+FE FASPLNCYF QYCSAF DTD YFGS GP L+F P++GSFEANPPFCEEL+ V++ E+LL++S LSFIVFIP+WR+PP ALT +E S F RHQ+ L A EHEYR + Sbjct: 20 LVYCYPVRLAVSAPPMPSVEMHMENNVVCIRY-------KGEMVKV----------SRNYFSKLWLLYRYSCIDDSAFERFLPRVWCLLRRYQMMFGV--GLYEGTGLQGSLPVHVFEALHRLFGVSFECFASPLNCYFRQYCSAFPDTDGYFGSRGPCLDFAPLSGSFEANPPFCEELMDAMVSHFERLLESSPEPLSFIVFIPEWREPPTPALTRMEQSRFKRHQLILPAFEHEYRSGS 241
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Fly
Match: CG11399 (gene:FBgn0037021 transcript:FBtr0078277) HSP 1 Score: 390.578 bits (1002), Expect = 1.127e-121 Identity = 235/660 (35.61%), Postives = 348/660 (52.73%), Query Frame = 1 Query: 211 YAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKRKASGDSDEINQKRACY-----------RSNIHIEP-----LLGP---AFVPGSLYNFVSSKYIPMVKGRRPNKSVFLP-PHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLG-CENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 Y +L L+N GWRKFWSKRENR YY+NK+TG SLW++ + + + + A G + I ++HI P GP FV ++ +V+ RP LP PHP +E RA KL + + CM RENI P SFNRWL++ K ID G DP+ PS C I SSM RE++ +P IVKPK+ A+ QL RY+E+ K ++E R+A +K++K NV++T +W+R S++D+ ++L +KR C+PH+ + V+ SVE +C+K+Y+LS ++ ++R H +L +++GI + + C+PI A P P T+ ++ + K + +I PD ++T + +KLE LY + DD + F R+WCLL+RY ++LG N S + QAALPV VFE L+R F V+FE FASP N YF QYCSAF DTD YFGS GP L+F PV+GSF+ NPP CEEL+ + +++KLL ++ LSFIVF+P+W+ +++ L+ S + R M + HEYR + ++L + T VV+LQN++G+ RW P R+ L + Sbjct: 131 YGEELTAELVNQGWRKFWSKRENRPYYWNKVTGESLWEMPGTRPFDPLTDPLGICHAGGPTPIIPNMHQQQQHQHHHLKRRPSDDMHIHPNQHHMGGGPPMKKFVLAGPWDLEVCTNAVIVE--RP--PTLLPQPHPEVEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRWLMERKVIDTGCDPLLPSSCMPEISSSMYREIMSDIPIKIVKPKFTGDARKQLSRYAEAAKQIIESRSAPAESKKVVKWNVEDTFQWLRRTVGASYEDFQDRLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERHSQLLKEHGI----------------------------PEPTPPPPPPHLKKVWCYPIQFAVPSPRMP------TIEYLQDRDHMIIKYTPATINQPDAQYINLT--YLQKLEQLYRHNCFDDKKFDLFIGRVWCLLKRYQTFLGNALNSSQEAELTQAALPVPVFECLHRQFGVSFECFASPFNSYFRQYCSAFADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEASLLHIDKLLTDTMEPLSFIVFLPEWK-----SISKLDDSMYKRRSMVVLGMAHEYRHG---------YQHMLQKSDVLIKCMQGTQVVWLQNSAGYARWGPNEIRVEALREAF 736
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Zebrafish
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:553360]) HSP 1 Score: 446.817 bits (1148), Expect = 2.933e-145 Identity = 257/696 (36.93%), Postives = 363/696 (52.16%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL---------------------NELQLQESSYNSITKRKASGDSDEINQ---KRACYR--------------SNIHIEPLL--------------GPA-FVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLS 2145 +LP+ L+ AGW K WSKRENR YY+N+ T SLW++ E N KR S D+ + KR S ++P + PA + P +Y + + +++ R P + LPPHP IE +RA L KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD I SM RE++ +P + + KY A+ L +Y+E+ K +++ RNA+P RK++K NV++T+ W+R + S +DY+++L +++ C PH+ + ++SVE IC K+Y++S EY R+R HL L ++ I +D + + + L C+P+ L+ P P T++ + + ++ K +V + ++ HF KLE LY S DDP F +R+WCL++RY G +G G Q +LPV VFE LN+ F V FE FASPLNCYF Q+CSAF D D +FGS GP L F P +GSFEANPPFCEEL+ V + E LL S LSFI+F+P+WRDPP ALT +E S F RHQMT+ A EHEYR + + EI ++ H T V+FLQNN+GF +W PTTER+ EL+A Y + S Sbjct: 38 QELPDELIQAGWSKCWSKRENRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPASGEANADAGLGNGQRKRHPSEDASQAGPNSFKRPKVEIPATPTTPTVPISPSTPGVKPWVNTTTDEKQGQASTPAPAPYRPSVVYWDLDIQTNAVIRERAP--ADHLPPHPEIELQRAQLTTKLRQHYHELCSQREGIEPPRESFNRWLLERKVVDKGLDPLLPSECDPVISPSMFREIMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMIDSRNATPESRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQCGPHVASVAKDSVEGICSKIYHISAEYVRRIRQAHLTLLKECNI-----------------------SVDGTE-----SAEVQDRLVYCYPVRLSIPAPP----QTRVELHFENDIACLRFKGEMVKV----------SRGHFNKLELLYRYSCIDDPRFEKFLSRVWCLIKRYQVMFG--SGVNEGSGLQGSLPVPVFEALNKQFGVTFECFASPLNCYFKQFCSAFPDIDGFFGSRGPFLSFSPASGSFEANPPFCEELMDAMVTHFEDLLGRSSEPLSFIIFVPEWRDPPTPALTRMEASRFRRHQMTVPAFEHEYRSGS---------QHICKREEIYYKAIHGTAVIFLQNNAGFAKWEPTTERIQELLAAYKVSGRS 678
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Zebrafish
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:553360]) HSP 1 Score: 342.428 bits (877), Expect = 4.382e-107 Identity = 202/581 (34.77%), Postives = 293/581 (50.43%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL---------------------NELQLQESSYNSITKRKASGDSDEINQ---KRACYR--------------SNIHIEPLL--------------GPA-FVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNY 1800 +LP+ L+ AGW K WSKRENR YY+N+ T SLW++ E N KR S D+ + KR S ++P + PA + P +Y + + +++ R P + LPPHP IE +RA L KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD I SM RE++ +P + + KY A+ L +Y+E+ K +++ RNA+P RK++K NV++T+ W+R + S +DY+++L +++ C PH+ + ++SVE IC K+Y++S EY R+R HL L ++ I +D + + + L C+P+ L+ P P T++ + + ++ K +V +++ HF KLE LY S DDP F +R+WCL++RY G +G G Q +LPV VFE LN+ F V FE FASPLNCYF Q+CSAF D D +FGS GP L F P +GSFEANPPFCEEL+ V + Sbjct: 38 QELPDELIQAGWSKCWSKRENRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPASGEANADAGLGNGQRKRHPSEDASQAGPNSFKRPKVEIPATPTTPTVPISPSTPGVKPWVNTTTDEKQGQASTPAPAPYRPSVVYWDLDIQTNAVIRERAP--ADHLPPHPEIELQRAQLTTKLRQHYHELCSQREGIEPPRESFNRWLLERKVVDKGLDPLLPSECDPVISPSMFREIMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMIDSRNATPESRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQCGPHVASVAKDSVEGICSKIYHISAEYVRRIRQAHLTLLKECNI-----------------------SVDGTE-----SAEVQDRLVYCYPVRLSIPAP----PQTRVELHFENDIACLRFKGEMVK----------VSRGHFNKLELLYRYSCIDDPRFEKFLSRVWCLIKRYQVMFG--SGVNEGSGLQGSLPVPVFEALNKQFGVTFECFASPLNCYFKQFCSAFPDIDGFFGSRGPFLSFSPASGSFEANPPFCEELMDAMVTH 572
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Xenopus
Match: iyd (iodotyrosine deiodinase [Source:Xenbase;Acc:XB-GENE-975245]) HSP 1 Score: 437.573 bits (1124), Expect = 6.735e-142 Identity = 256/683 (37.48%), Postives = 366/683 (53.59%), Query Frame = 1 Query: 220 DLPENLLNAGWRKFWSKRENREYYYNKITGASLWD---------------LNELQLQESSYNSI------TKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGS---------------------LYNFVSSKYIPMVKGRRPNKSV-----FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 DLP+ L+ AGW K WSKRE+R YY+N+ T SLW+ LN +Q ++ TK + S++++ + I P+ P VP S +Y + + +VK P+ + FLPP+P +E R+ L+ KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + K+ AK L +Y+E+ K L+E R+AS RK++K NV++T W+R + + +DY+++L +++ C PH+ + ++SVE IC K+Y++S+EY R+R HL L + IP+ ++ ++P+ CHP+ L+ P +L TQ V +Q+E SLV + I + +F KL LY +S DD F +R+WCLL+RY G + G Q ALPV VF+ L+++F V E FASPLNCYF QYCSAF DTD YFGS GP L FFPV+GSFEANPPF EEL+ V + E LL++S+ LSFI+FIP+WRDPP ALT +E S F RHQ+ L A +HEYR + + E+ ++ H+T V+FLQN GF +WTPT ER+ EL A Y Sbjct: 34 DLPDELVQAGWEKCWSKRESRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPVQVEGAGAVPETPKDTKPQKRRISEDLSAGETVKKLKIESTPVT-PGSVPSSPIFPGVSLDEKQLSALLKTTDVYWDLDIQSNVVVKPLPPSHLLPPPSQFLPPYPEVELLRSQLVLKLRQHYRELCQQREGIDPPRESFNRWLLERKVLDRGPDPLLPSDCDPAVSPSMFREIMNDVPIRLSRIKHREEAKRLLFKYAEAAKRLIESRSASSDSRKMVKWNVEDTFSWLRRDHLATKEDYMDRLEHLRKQCGPHMAAVAKDSVEGICSKIYHISREYVKRIREKHLALLRDANIPVDQV----------------------PAVSPQDRRVF------CHPVRLSVP-----ALPTQPGVEVQQE-------GSLVCVRYKG-ESVRINQSYFSKLYQLYRLSCIDDSGTERFLSRVWCLLRRYQVMFG--TAQYEGSGLQGALPVHVFQTLHKVFGVTLECFASPLNCYFKQYCSAFTDTDGYFGSRGPCLSFFPVSGSFEANPPFSEELMDAMVTHFENLLESSDQPLSFIIFIPEWRDPPTPALTRMESSRFKRHQLLLTAFQHEYRSGS---------QHMCKREELYYKAVHNTAVIFLQNEPGFLKWTPTAERIQELTASY 663
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Xenopus
Match: iyd (iodotyrosine deiodinase [Source:Xenbase;Acc:XB-GENE-975245]) HSP 1 Score: 434.491 bits (1116), Expect = 3.625e-141 Identity = 249/649 (38.37%), Postives = 357/649 (55.01%), Query Frame = 1 Query: 220 DLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSI------TKRKASGDSDEINQKRACYRSNIHIEPLLGPAF--VPGSLYNFVSSKYIPMVKGRRPNKSV-----FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 DLP+ L+ AGW K WSKRE+R YY+N+ T SLW++ L + + + + + +G E + + I + G + +Y + + +VK P+ + FLPP+P +E R+ L+ KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + K+ AK L +Y+E+ K L+E R+AS RK++K NV++T W+R + + +DY+++L +++ C PH+ + ++SVE IC K+Y++S+EY R+R HL L + IP+ +P+ CHP+ L+ P +L TQ V +Q+E SLV + I + +F KL LY +S DD F +R+WCLL+RY G + G Q ALPV VF+ L+++F V E FASPLNCYF QYCSAF DTD YFGS GP L FFPV+GSFEANPPF EEL+ V + E LL++S+ LSFI+FIP+WRDPP ALT +E S F RHQ+ L A +HEYR + + E+ ++ H+T V+FLQN GF +WTPT ER+ EL A Y Sbjct: 34 DLPDELVQAGWEKCWSKRESRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPVQVEGAGAVPETPKDTKPQKRRISEDLSAGETVKKLKVLVYWDLDIQSNVVVKPLPPSHLLPPPSQFLPPYPEVELLRSQLVLKLRQHYRELCQQREGIDPPRESFNRWLLERKVLDRGPDPLLPSDCDPAVSPSMFREIMNDVPIRLSRIKHREEAKRLLFKYAEAAKRLIESRSASSDSRKMVKWNVEDTFSWLRRDHLATKEDYMDRLEHLRKQCGPHMAAVAKDSVEGICSKIYHISREYVKRIREKHLALLRDANIPV----------------------------SPQDRRVF------CHPVRLSVP-----ALPTQPGVEVQQE-------GSLVCVRYKG-ESVRINQSYFSKLYQLYRLSCIDDSGTERFLSRVWCLLRRYQVMFG--TAQYEGSGLQGALPVHVFQTLHKVFGVTLECFASPLNCYFKQYCSAFTDTDGYFGSRGPCLSFFPVSGSFEANPPFSEELMDAMVTHFENLLESSDQPLSFIIFIPEWRDPPTPALTRMESSRFKRHQLLLTAFQHEYRSGS---------QHMCKREELYYKAVHNTAVIFLQNEPGFLKWTPTAERIQELTASY 624
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Xenopus
Match: iyd (iodotyrosine deiodinase [Source:Xenbase;Acc:XB-GENE-975245]) HSP 1 Score: 431.024 bits (1107), Expect = 8.521e-140 Identity = 246/646 (38.08%), Postives = 357/646 (55.26%), Query Frame = 1 Query: 229 ENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSI------TKRKASGDSDEINQKRACYRSNIHIEPLLGPAF--VPGSLYNFVSSKYIPMVKGRRPNKSV-----FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 + L+ AGW K WSKRE+R YY+N+ T SLW++ L + + + + + +G E + + I + G + +Y + + +VK P+ + FLPP+P +E R+ L+ KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + K+ AK L +Y+E+ K L+E R+AS RK++K NV++T W+R + + +DY+++L +++ C PH+ + ++SVE IC K+Y++S+EY R+R HL L + IP+ ++ ++P+ CHP+ L+ P +L TQ V +Q+E SLV + I + +F KL LY +S DD F +R+WCLL+RY G + G Q ALPV VF+ L+++F V E FASPLNCYF QYCSAF DTD YFGS GP L FFPV+GSFEANPPF EEL+ V + E LL++S+ LSFI+FIP+WRDPP ALT +E S F RHQ+ L A +HEYR + + E+ ++ H+T V+FLQN GF +WTPT ER+ EL A Y Sbjct: 31 DELVQAGWEKCWSKRESRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPVQVEGAGAVPETPKDTKPQKRRISEDLSAGETVKKLKVLVYWDLDIQSNVVVKPLPPSHLLPPPSQFLPPYPEVELLRSQLVLKLRQHYRELCQQREGIDPPRESFNRWLLERKVLDRGPDPLLPSDCDPAVSPSMFREIMNDVPIRLSRIKHREEAKRLLFKYAEAAKRLIESRSASSDSRKMVKWNVEDTFSWLRRDHLATKEDYMDRLEHLRKQCGPHMAAVAKDSVEGICSKIYHISREYVKRIREKHLALLRDANIPVDQV----------------------PAVSPQDRRVF------CHPVRLSVP-----ALPTQPGVEVQQE-------GSLVCVRYKG-ESVRINQSYFSKLYQLYRLSCIDDSGTERFLSRVWCLLRRYQVMFG--TAQYEGSGLQGALPVHVFQTLHKVFGVTLECFASPLNCYFKQYCSAFTDTDGYFGSRGPCLSFFPVSGSFEANPPFSEELMDAMVTHFENLLESSDQPLSFIIFIPEWRDPPTPALTRMESSRFKRHQLLLTAFQHEYRSGS---------QHMCKREELYYKAVHNTAVIFLQNEPGFLKWTPTAERIQELTASY 624
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Xenopus
Match: iyd (iodotyrosine deiodinase [Source:Xenbase;Acc:XB-GENE-975245]) HSP 1 Score: 405.986 bits (1042), Expect = 2.209e-130 Identity = 237/629 (37.68%), Postives = 337/629 (53.58%), Query Frame = 1 Query: 220 DLPENLLNAGWRKFWSKRENREYYYNKITGASLWD---------------LNELQLQESSYNSI------TKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGS---------------------LYNFVSSKYIPMVKGRRPNKSV-----FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIAN 1965 DLP+ L+ AGW K WSKRE+R YY+N+ T SLW+ LN +Q ++ TK + S++++ + I P+ P VP S +Y + + +VK P+ + FLPP+P +E R+ L+ KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + K+ AK L +Y+E+ K L+E R+AS RK++K NV++T W+R + + +DY+++L +++ C PH+ + ++SVE IC K+Y++S+EY R+R HL L + IP+P + +P+ CHP+ L+ P +L TQ V +Q+E SLV + I + +F KL LY +S DD F +R+WCLL+RY G + G Q ALPV VF+ L+++F V E FASPLNCYF QYCSAF DTD YFGS GP L FFPV+GSFEANPPF EEL+ V + E LL++S+ LSFI+FIP+WRDPP ALT +E S F RHQ+ L A +HEYR + Sbjct: 34 DLPDELVQAGWEKCWSKRESRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPVQVEGAGAVPETPKDTKPQKRRISEDLSAGETVKKLKIESTPVT-PGSVPSSPIFPGVSLDEKQLSALLKTTDVYWDLDIQSNVVVKPLPPSHLLPPPSQFLPPYPEVELLRSQLVLKLRQHYRELCQQREGIDPPRESFNRWLLERKVLDRGPDPLLPSDCDPAVSPSMFREIMNDVPIRLSRIKHREEAKRLLFKYAEAAKRLIESRSASSDSRKMVKWNVEDTFSWLRRDHLATKEDYMDRLEHLRKQCGPHMAAVAKDSVEGICSKIYHISREYVKRIREKHLALLRDANIPVPAV-------------------------SPQDRRVF------CHPVRLSVP-----ALPTQPGVEVQQE-------GSLVCVRYKG-ESVRINQSYFSKLYQLYRLSCIDDSGTERFLSRVWCLLRRYQVMFG--TAQYEGSGLQGALPVHVFQTLHKVFGVTLECFASPLNCYFKQYCSAFTDTDGYFGSRGPCLSFFPVSGSFEANPPFSEELMDAMVTHFENLLESSDQPLSFIIFIPEWRDPPTPALTRMESSRFKRHQLLLTAFQHEYRSGS 615
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Xenopus
Match: iyd (iodotyrosine deiodinase [Source:Xenbase;Acc:XB-GENE-975245]) HSP 1 Score: 401.364 bits (1030), Expect = 2.409e-128 Identity = 244/684 (35.67%), Postives = 350/684 (51.17%), Query Frame = 1 Query: 220 DLPENLLNAGWRKFWSKRENREYYYNKITGASLWD---------------LNELQLQESSYNSI------TKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGS---------------------LYNFVSSKYIPMVKGRRPNKSV-----FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGC-ENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 DLP+ L+ AGW K WSKRE+R YY+N+ T SLW+ LN +Q ++ TK + S++++ + I P+ P VP S +Y + + +VK P+ + FLPP+P +E R+ L+ KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + K+ AK L +Y+E+ K L+E R+AS RK++K NV++T W+R + + +DY+++L +++ C PH+ + ++SVE IC K+Y++S+EY R+R HL L + IP+ ++ ++P+ CHP+ L+ P +L TQ V +Q+E + LV R E + N Q Y+S L + G Q ALPV VF+ L+++F V E FASPLNCYF QYCSAF DTD YFGS GP L FFPV+GSFEANPPF EEL+ V + E LL++S+ LSFI+FIP+WRDPP ALT +E S F RHQ+ L A +HEYR + + E+ ++ H+T V+FLQN GF +WTPT ER+ EL A Y Sbjct: 34 DLPDELVQAGWEKCWSKRESRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPVQVEGAGAVPETPKDTKPQKRRISEDLSAGETVKKLKIESTPVT-PGSVPSSPIFPGVSLDEKQLSALLKTTDVYWDLDIQSNVVVKPLPPSHLLPPPSQFLPPYPEVELLRSQLVLKLRQHYRELCQQREGIDPPRESFNRWLLERKVLDRGPDPLLPSDCDPAVSPSMFREIMNDVPIRLSRIKHREEAKRLLFKYAEAAKRLIESRSASSDSRKMVKWNVEDTFSWLRRDHLATKEDYMDRLEHLRKQCGPHMAAVAKDSVEGICSKIYHISREYVKRIREKHLALLRDANIPVDQV----------------------PAVSPQDRRVF------CHPVRLSVP-----ALPTQPGVEVQQEGS---------------------------------LVCVRYKGESVRIN-------QSYFSKLVMFGTAQYEGSGLQGALPVHVFQTLHKVFGVTLECFASPLNCYFKQYCSAFTDTDGYFGSRGPCLSFFPVSGSFEANPPFSEELMDAMVTHFENLLESSDQPLSFIIFIPEWRDPPTPALTRMESSRFKRHQLLLTAFQHEYRSGS---------QHMCKREELYYKAVHNTAVIFLQNEPGFLKWTPTAERIQELTASY 634
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Mouse
Match: Pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:MGI Symbol;Acc:MGI:2443858]) HSP 1 Score: 414.461 bits (1064), Expect = 5.432e-133 Identity = 226/547 (41.32%), Postives = 319/547 (58.32%), Query Frame = 1 Query: 511 MVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLSNN 2151 ++K R P++ LPPHP +E R+ L+ KLR + C RE I PP SFNRW+L+ K +D G DP+ PS C+ + SM RE++ +P + + K+ AK L +Y+E+ + L+E R+ASP RK++K NV++T W+R E S +DY+++L ++R C PH+ ++SVE IC K+Y++S EY R+R HL + ++N IP +++ ++L P+ L C+P+ LA P S+ E+++ + S+V I +++ +F KL LY S DD F R+WCLL+RY G G + G Q +LPV VFE L+RLF V+FE FASPLNCYF QYCSAF DTD YFGS GP L+F P++GSFEANPPFCEEL+ V++ EKLL++S LSFIVFIP+WR+PP ALT +E S F RHQ+ L A EHEYR + + E+ ++ H+T V+FLQN GF +W PT ERL EL A Y + S+ Sbjct: 184 VIKHRGPSE--VLPPHPDVELLRSQLILKLRQHYRELCQQREGIEPPRESFNRWMLERKVVDKGCDPLLPSNCEPVVSPSMFREIMNDIPIRLSRIKFREEAKRLLFKYAEAARRLIESRSASPDSRKVVKWNVEDTFSWLRKEHSASKEDYMDRLEHLRRQCGPHVSAAAKDSVEGICSKIYHISLEYVKRIREKHLAVLKENNIP---------------------EEVEASELEPR--------LVYCYPVRLAVSAPPMPSV----------EMHVEN---SVVCIRYKG-EMVKVSRSYFSKLWLLYRYSCVDDSAFERFLPRVWCLLRRYQMMFGV--GLYEGTGLQGSLPVHVFETLHRLFGVSFECFASPLNCYFRQYCSAFPDTDGYFGSRGPCLDFTPLSGSFEANPPFCEELMDAMVSHFEKLLESSAEPLSFIVFIPEWREPPTPALTRMEQSRFKRHQLVLPAFEHEYRSGS---------QHICKKEEMHYKAVHNTAVLFLQNGPGFAKWGPTPERLQELTAAYKQSGRSHG 674 HSP 2 Score: 56.225 bits (134), Expect = 1.511e-7 Identity = 21/37 (56.76%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL 327 DLPE L++AGW K WS+RE+R YY+N+ T SLW++ Sbjct: 38 QDLPEELVHAGWEKCWSRRESRPYYFNRFTNQSLWEM 74
BLAST of phosphorylated CTD-interacting factor 1 vs. UniProt/SwissProt
Match: sp|A0A0R4IKJ1|CAPAM_DANRE (mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase OS=Danio rerio OX=7955 GN=pcif1 PE=1 SV=1) HSP 1 Score: 446.817 bits (1148), Expect = 2.214e-144 Identity = 257/696 (36.93%), Postives = 363/696 (52.16%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL---------------------NELQLQESSYNSITKRKASGDSDEINQ---KRACYR--------------SNIHIEPLL--------------GPA-FVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLS 2145 +LP+ L+ AGW K WSKRENR YY+N+ T SLW++ E N KR S D+ + KR S ++P + PA + P +Y + + +++ R P + LPPHP IE +RA L KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD I SM RE++ +P + + KY A+ L +Y+E+ K +++ RNA+P RK++K NV++T+ W+R + S +DY+++L +++ C PH+ + ++SVE IC K+Y++S EY R+R HL L ++ I +D + + + L C+P+ L+ P P T++ + + ++ K +V + ++ HF KLE LY S DDP F +R+WCL++RY G +G G Q +LPV VFE LN+ F V FE FASPLNCYF Q+CSAF D D +FGS GP L F P +GSFEANPPFCEEL+ V + E LL S LSFI+F+P+WRDPP ALT +E S F RHQMT+ A EHEYR + + EI ++ H T V+FLQNN+GF +W PTTER+ EL+A Y + S Sbjct: 38 QELPDELIQAGWSKCWSKRENRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPASGEANADAGLGNGQRKRHPSEDASQAGPNSFKRPKVEIPATPTTPTVPISPSTPGVKPWVNTTTDEKQGQASTPAPAPYRPSVVYWDLDIQTNAVIRERAP--ADHLPPHPEIELQRAQLTTKLRQHYHELCSQREGIEPPRESFNRWLLERKVVDKGLDPLLPSECDPVISPSMFREIMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMIDSRNATPESRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQCGPHVASVAKDSVEGICSKIYHISAEYVRRIRQAHLTLLKECNI-----------------------SVDGTE-----SAEVQDRLVYCYPVRLSIPAPP----QTRVELHFENDIACLRFKGEMVKV----------SRGHFNKLELLYRYSCIDDPRFEKFLSRVWCLIKRYQVMFG--SGVNEGSGLQGSLPVPVFEALNKQFGVTFECFASPLNCYFKQFCSAFPDIDGFFGSRGPFLSFSPASGSFEANPPFCEELMDAMVTHFEDLLGRSSEPLSFIIFVPEWRDPPTPALTRMEASRFRRHQMTVPAFEHEYRSGS---------QHICKREEIYYKAIHGTAVIFLQNNAGFAKWEPTTERIQELLAAYKVSGRS 678
BLAST of phosphorylated CTD-interacting factor 1 vs. UniProt/SwissProt
Match: sp|P59114|CAPAM_MOUSE (mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase OS=Mus musculus OX=10090 GN=Pcif1 PE=1 SV=1) HSP 1 Score: 414.461 bits (1064), Expect = 3.800e-132 Identity = 226/547 (41.32%), Postives = 319/547 (58.32%), Query Frame = 1 Query: 511 MVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLSNN 2151 ++K R P++ LPPHP +E R+ L+ KLR + C RE I PP SFNRW+L+ K +D G DP+ PS C+ + SM RE++ +P + + K+ AK L +Y+E+ + L+E R+ASP RK++K NV++T W+R E S +DY+++L ++R C PH+ ++SVE IC K+Y++S EY R+R HL + ++N IP +++ ++L P+ L C+P+ LA P S+ E+++ + S+V I +++ +F KL LY S DD F R+WCLL+RY G G + G Q +LPV VFE L+RLF V+FE FASPLNCYF QYCSAF DTD YFGS GP L+F P++GSFEANPPFCEEL+ V++ EKLL++S LSFIVFIP+WR+PP ALT +E S F RHQ+ L A EHEYR + + E+ ++ H+T V+FLQN GF +W PT ERL EL A Y + S+ Sbjct: 184 VIKHRGPSE--VLPPHPDVELLRSQLILKLRQHYRELCQQREGIEPPRESFNRWMLERKVVDKGCDPLLPSNCEPVVSPSMFREIMNDIPIRLSRIKFREEAKRLLFKYAEAARRLIESRSASPDSRKVVKWNVEDTFSWLRKEHSASKEDYMDRLEHLRRQCGPHVSAAAKDSVEGICSKIYHISLEYVKRIREKHLAVLKENNIP---------------------EEVEASELEPR--------LVYCYPVRLAVSAPPMPSV----------EMHVEN---SVVCIRYKG-EMVKVSRSYFSKLWLLYRYSCVDDSAFERFLPRVWCLLRRYQMMFGV--GLYEGTGLQGSLPVHVFETLHRLFGVSFECFASPLNCYFRQYCSAFPDTDGYFGSRGPCLDFTPLSGSFEANPPFCEELMDAMVSHFEKLLESSAEPLSFIVFIPEWREPPTPALTRMEQSRFKRHQLVLPAFEHEYRSGS---------QHICKKEEMHYKAVHNTAVLFLQNGPGFAKWGPTPERLQELTAAYKQSGRSHG 674 HSP 2 Score: 56.225 bits (134), Expect = 1.057e-6 Identity = 21/37 (56.76%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL 327 DLPE L++AGW K WS+RE+R YY+N+ T SLW++ Sbjct: 38 QDLPEELVHAGWEKCWSRRESRPYYFNRFTNQSLWEM 74
BLAST of phosphorylated CTD-interacting factor 1 vs. UniProt/SwissProt
Match: sp|Q9H4Z3|CAPAM_HUMAN (mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase OS=Homo sapiens OX=9606 GN=PCIF1 PE=1 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 1.341e-126 Identity = 222/542 (40.96%), Postives = 306/542 (56.46%), Query Frame = 1 Query: 511 MVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQM---TVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 ++K R P S LPPHP +E R+ L+ KLR + C RE I PP SFNRW+L+ K +D G DP+ PS C+ + SM RE++ +P + + K+ AK L +Y+E+ + L+E R+ASP RK++K NV++T W+R + S +DY+++L ++R C PH+ ++SVE IC K+Y++S EY R+R HL + ++N I + L C+P+ LA P S+ M V I+ K +V + ++ +F KL LY S DD F R+WCLL+RY G G + G Q +LPV VFE L+RLF V+FE FASPLNCYF QYCSAF DTD YFGS GP L+F P++GSFEANPPFCEEL+ V++ E+LL++S LSFIVFIP+WR+PP ALT +E S F RHQ+ L A EHEYR + + E+ ++ H+T V+FLQN+ GF +W PT ERL EL A Y Sbjct: 185 VIKHRGP--SEVLPPHPEVELLRSQLILKLRQHYRELCQQREGIEPPRESFNRWMLERKVVDKGSDPLLPSNCEPVVSPSMFREIMNDIPIRLSRIKFREEAKRLLFKYAEAARRLIESRSASPDSRKVVKWNVEDTFSWLRKDHSASKEDYMDRLEHLRRQCGPHVSAAAKDSVEGICSKIYHISLEYVKRIREKHLAILKENNIS-----------------------------EEVEAPEVEPRLVYCYPVRLAVSAPPMPSVEMHMENNVVCIRY-------KGEMVKV----------SRNYFSKLWLLYRYSCIDDSAFERFLPRVWCLLRRYQMMFGV--GLYEGTGLQGSLPVHVFEALHRLFGVSFECFASPLNCYFRQYCSAFPDTDGYFGSRGPCLDFAPLSGSFEANPPFCEELMDAMVSHFERLLESSPEPLSFIVFIPEWREPPTPALTRMEQSRFKRHQLILPAFEHEYRSGS---------QHICKKEEMHYKAVHNTAVLFLQNDPGFAKWAPTPERLQELSAAY 667 HSP 2 Score: 58.151 bits (139), Expect = 3.296e-7 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 1 Query: 214 AHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL 327 DLPE L++AGW K WS+RENR YY+N+ T SLW++ Sbjct: 37 VQDLPEELVHAGWEKCWSRRENRPYYFNRFTNQSLWEM 74
BLAST of phosphorylated CTD-interacting factor 1 vs. TrEMBL
Match: R7U274 (WW domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_219923 PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 5.277e-150 Identity = 261/655 (39.85%), Postives = 359/655 (54.81%), Query Frame = 1 Query: 208 DYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLW---------DLNELQLQESSYNSITKRKASGD------SDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 D HDLP +LL AGWR+FWS+RE R Y++NK++ S W D + L + ++S + R S D S+ + KR + P +F +NF + M+ R+P PPHP IE R L++KLR Q+ + C RE I PP SFNRWLL+ K ID G+DP+ P C + SM RE++ +P +VK KY N K QL +Y+++ K L++ R+AS RK++K V++ ++W++ E S+ DY +LV +K+ CQPHI ++ + SVE IC+KMYN + ++ ++ H EIL ++ I P P+ N PC+PI + P P + + + + +VS+ + HF KLE LY + RDDP+ F R+WCLL+RY++Y G G+ Q ALPV VFE L+R+F+V FE FASPLNCYF QYCSAF DTD YFGS GP L+F P +GSFEANPPF EEL+ V++ E LL S LSFIVF+PDWRDPP EAL LE S F R Q T+ A EHEYR N+ + R+ H T+++FLQN +GF +W PT ERLNEL+ Y Sbjct: 38 DPVHDLPHDLLEAGWRRFWSRREGRPYFFNKVSNESRWEIPGQDAFTDSDPLGI-DASPAPMPSRSLSIDTAMPSTSNGVGMKRRSSEDPNLMSPAKKISFSYSPYWNFDIPTNV-MIWERKP--CYLPPPHPEIELLRTQLMSKLRIQYKDLCRNREKIEPPRESFNRWLLERKVIDKGHDPVLPCLCTPEVSPSMYREIMHDIPMKVVKCKYFNETKRQLSKYAQAAKELMDSRSASAESRKLVKWQVEDVIQWLQRTENASYADYDSRLVHLKKQCQPHIMEVAKSSVEGICLKMYNTAVDHVKKIHERHW-----------EILAEMKIYPSTTGP-----------PPPRRN-------IPCYPIQMVIPAPRMSGIEHHI-------------EGDVVSLRFKSEHLIKVNTSHFHKLEQLYRCNCRDDPKFENFLPRVWCLLRRYHTYFGLSADEGSGL--QGALPVPVFECLHRVFNVTFECFASPLNCYFKQYCSAFVDTDGYFGSRGPLLDFSPTSGSFEANPPFGEELMEAMVDHFESLLSESNDPLSFIVFVPDWRDPPTEALMRLESSRFKRKQATVVAYEHEYRQG---------FQHIVNKADTNIRASHGTVIIFLQNEAGFNKWGPTRERLNELLLAY 635
BLAST of phosphorylated CTD-interacting factor 1 vs. TrEMBL
Match: A0A1S3HUP7 (phosphorylated CTD-interacting factor 1 OS=Lingula unguis OX=7574 GN=LOC106158373 PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 2.040e-149 Identity = 273/678 (40.27%), Postives = 368/678 (54.28%), Query Frame = 1 Query: 160 SYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNEL---QLQESS--------------YNSITKRKASGD--SDEINQKRACYRSNIHI---EPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 S +SP +E E LP LL AGWR+FWSKRE R YY+NK+T SLWDL +L QL S + I + S D S ++ KR + P+ P + +NF + + + S LPPHP +E RA L+ KLR Q+ C +RE I P SFNRWLL+ K ID G D +FPS C I SM RE++ +P +VKPKY A+ QL +Y+E+ K +VE RNASP RK++K + ++T +W+R + ++DDY+E+L +KR CQP++ + + SVE IC K+Y LS EY ++ ++ Q++G+ P++ + P ++ C+P+ L PCP ++ I+ E K + I HF+KLE LY + +DDP F R+WCLL+RY +Y G + G + Q ALPV VFE L+RLF V FE FASPLNC++ QYCSAF D D YFGS GP L+F PV+GSFEANPPFCEEL+ V++ E LL S LSFIVFIP+WRDPP EAL LE S F R Q+T+ EHEYR + E+ +S H TLV+FLQN +GF +W PTTER+NEL+ Y Sbjct: 81 SQMSPPQSTNESEAE------LPMELLQAGWRRFWSKREGRPYYFNKLTNQSLWDLQQLLDTQLDPLSDPLGIATPSPPPMSPSDIRMTRLSVDIPSPQVGNKRRSSGEALASPVKRPMQQPVPIISPTWNFEIPTNVVIYER---AMSHILPPHPEVEVLRAQLILKLRQQYQEMCHSREGIDSPLESFNRWLLERKVIDKGNDCMFPSNCSPEISQSMYREIVNDIPIKLVKPKYSADARRQLSKYAEAAKKMVETRNASPESRKLVKWHAEDTFQWLRKQPNATYDDYLERLAHLKRQCQPYLIEAAKGSVEGICSKIYALSCEYAKKVNEKSWQILQEHGVKDPDL---------PEPPRRKVM---------------------CYPVLLGVPCPRMPTVEHH----IEGETTYVRFKGETMKI----------NTSHFQKLEQLYRWNCKDDPRFDKFLARVWCLLRRYQTYFGPQQNE--GFLLQGALPVPVFECLHRLFGVTFECFASPLNCFYKQYCSAFADIDSYFGSRGPILDFHPVSGSFEANPPFCEELMEAMVDHFESLLAESSEPLSFIVFIPEWRDPPTEALVRLENSVFKRGQVTIPPFEHEYRHG---------FQHICPKTELNVKSSHGTLVIFLQNEAGFVKWAPTTERVNELLLAY 694
BLAST of phosphorylated CTD-interacting factor 1 vs. TrEMBL
Match: T1J547 (WW domain-containing protein OS=Strigamia maritima OX=126957 PE=4 SV=1) HSP 1 Score: 464.537 bits (1194), Expect = 9.164e-149 Identity = 265/677 (39.14%), Postives = 369/677 (54.51%), Query Frame = 1 Query: 145 SMDNSSYLSPATHDSEGSIEK-------DYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKR---------KASGDSDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 S D S SPA G D AH+LP+ L+N GW+KFWSKRENR Y++NK+T SLW++ + S Y+ +T S + I KR ++ P FV G ++ + + I ++ R P S+ PPHP IE RAN + +LR + C +RE I P SFNRWLL+ K D G DP+ PS C + I SM RE++ +P +V+PKY A+ QL +Y+E+ K ++E RN SP RKI+K NV++ +W+R + ++DDY+E+L +K CQPH+ + + SVE IC+K+Y+LS +Y ++ H L ++GI EI + L V NP L C+P+ LA P ++ + D ++++ + I +F+KLE LY + DD + F +R+WCLL+RY +Y G N G Q ALPV+VF+ L R FDV+FE FASPLNCYF Q+CSAF DTD +FGS GP L+F PV+GSFEANPPFCEEL+ V + EKLL +S LSFIVF+ +WRDP AL LE S F RH + + A EHEYR N+ E+ +S H T+ V+LQN +G+ RW PT ER+ + Y Sbjct: 31 SNDGSRDSSPAAATPTGDFASPQHPLSLDPAHELPQELINQGWKKFWSKRENRPYFWNKMTNESLWEMPRM-ANSSQYDPMTDPLGIQCSPMPSESPATPVIAAKRRASDTDGSSSPS-AKRFVLGGPWD-LEVQTIAVMWERTP--SLLPPPHPQIELLRANYVGRLRQHYQEMCHSREGIDAPKESFNRWLLERKVADTGSDPVLPSACFREISMSMYREIMNDIPIKLVRPKYSGDARKQLSKYAEAAKKMIESRNVSPRSRKIVKWNVEDAFQWLRKTQNATYDDYLERLAHLKHQCQPHLTEAAKSSVEGICLKIYHLSIDYAKKIHDKHWALLNEHGI--AEIRSSLQ----VTNPKKVL----------------------CYPVQLALSSPRLPTVEF-----------VQDKDMTILTF---NGDSVRINSLYFQKLEQLYRWNCSDDRKFENFLSRVWCLLKRYQTYFGVSNNE--GHCTQGALPVSVFQALQRNFDVSFECFASPLNCYFRQFCSAFPDTDGFFGSRGPILDFRPVSGSFEANPPFCEELMETVVEHFEKLLSHSNEPLSFIVFMAEWRDPTPVALAKLEASSFRRHHVVVSAMEHEYRHG---------FQHVCNRTEVNIKSAHGTVAVWLQNEAGYSRWGPTKERIEAFLDSY 649
BLAST of phosphorylated CTD-interacting factor 1 vs. TrEMBL
Match: K1QQ00 (Phosphorylated CTD-interacting factor 1 OS=Crassostrea gigas OX=29159 GN=CGI_10011691 PE=4 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 1.108e-147 Identity = 268/659 (40.67%), Postives = 355/659 (53.87%), Query Frame = 1 Query: 199 IEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSI----------------TKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIP---MVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELM 2118 + D HDLP LL GWR+FWSKRE R Y++NK T SLWD+ S N+ + S S +I Q + + +E L P+ P Y+ + IP ++ R P PP P +E R +NKLR Q+ C TRE I P SFNRWLL+ K D G DP+ PS+C + SM RE++ +P +VKPKY A+ QL +Y+ES K ++E R+AS RKI+K NV++T+ W+R + S++DY+E+L +KR CQPH+ + + SVE IC KMYN+S E ++ H +L +++GI P D IN C+PI + PCP TV + ++ K + EI I HF KLE LY ++ RDDP F R+WCLL+RY++ G G G Q AL V+VFE L+R+F V FE FASPLNCYF QYCSAF DTD YFGS GP L F PV+GSFEANPPF EEL+ V++ E LLQ S+ LSF VF+P+WRDPP EAL LE S + R + L EHEYR + ++ +S H TLVVFLQN++GFQRW PT E++ EL+ Sbjct: 76 MSPDPVHDLPVELLQMGWRRFWSKREQRPYFFNKNTNESLWDMPHFPGMSSPQNNFLTDPLGIGGEGPTPHHMDARLSRPSTDIPQPQTGEKRRASMEGLGSPSKRPAFAYSPFWNFDIPTNVVIFERVP--CCLPPPMPEVEKFRTQFVNKLRQQYQELCHTREGIDAPSESFNRWLLERKVCDRGKDPMLPSQCTPEVSQSMYREIMNDIPVKLVKPKYTGDARKQLFKYAESAKRMIETRSASSDSRKIVKWNVEDTITWLRKQGSPSYEDYLERLAHLKRQCQPHLTETAKSSVEGICSKMYNISCESVRKIHEFHWQLLKEHGIKEPAKFPDP----------------------------INPRKVLCYPIQMCVPCPRL------QTVELMQDKETHTLKCN---GEI-----LKINSSHFCKLEQLYKLNCRDDPRFDHFLGRVWCLLRRYHTLFGL--GPNEGFGLQGALSVSVFECLHRVFGVTFECFASPLNCYFKQYCSAFEDTDGYFGSRGPVLNFKPVSGSFEANPPFSEELMEAMVDHFENLLQESKEPLSFCVFVPEWRDPPTEALIRLESSRYKRKSVVLPPYEHEYRHG---------FQHMCPKDDMNVKSSHGTLVVFLQNDAGFQRWNPTPEKIKELL 679
BLAST of phosphorylated CTD-interacting factor 1 vs. TrEMBL
Match: A0A267DFP2 (WW domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig032164g4 PE=4 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 9.394e-147 Identity = 259/639 (40.53%), Postives = 365/639 (57.12%), Query Frame = 1 Query: 214 AHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLY-LVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 +HDL E LL AGWRKFWSKRENR YY+NK+T SLW+ L A + + ++ + P G + +NF S + V RP + +F P HP E RA L+ KLR + C++RENI PP SFNRWL++ D G DP+FPS CD + ++ RE++ LP + +PK AK QL RY+E+ K ++E R A+P RKI+K NV++T +++R + +++D +E+L +KR CQPHI++ +ESVEKIC K+Y+LS EY ++R LF+ V NP + D+ PK C+P+ + P P + Q+ E +D + V + ++ I + F KL+ LY L T +DP F RLWC+L RY ++LG ++ + QAALP+ VFE ++RLF V FE+FASPLNCYF QYCSAF DTD YFGS GP LEF+P+ GSFEANPPF EEL++ VN++E LL+ + LSF+VF+PDWRDPP EAL LE SP+NR Q + EH YR R++ ++ +S H TL+VFLQN++GF +WTPT+E++ +L+ + Sbjct: 106 SHDLSEELLAAGWRKFWSKRENRPYYFNKLTNQSLWEPPTAALPGVKRTLSDPAAAVPNHHHHHHQQG---PSAPKRPSFGGPQALDAAWNF--SVHSNCVTLERPPRRLFQP-HPETELLRAQLIAKLRQHYSELCVSRENIQPPPDSFNRWLIERYLSDKGSDPLFPSDCDNELSYALFREIINDLPVRLCRPKLSADAKKQLYRYAEASKAMIESRVANPESRKIVKWNVEQTYQFLRQAKMPTYEDCLERLAHLKRTCQPHIEEAAKESVEKICTKLYHLSVEYAKKVRELQETLFK------------------VTNPTDPWADLPPWSGDPKRR-------VRCYPVQICSPAPR-PAAQQQLV-----ETGCTD-RMQFVRYGRDNSSQQGICRSVFAKLQQLYTLHCTEEDPSMEKFFPRLWCMLTRYQAFLGQQSQN-----TQAALPIPVFEAISRLFGVTFELFASPLNCYFKQYCSAFPDTDCYFGSRGPVLEFYPLEGSFEANPPFSEELMVAMVNHMENLLKEATGPLSFMVFLPDWRDPPTEALVRLEASPYNRRQTCVLPFEHSYRNG-------MQHCLERDE-DLYVKSAHGTLIVFLQNDAGFMKWTPTSEKIKDLLIAF 693
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Cavefish
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:103029407]) HSP 1 Score: 421.009 bits (1081), Expect = 2.351e-135 Identity = 217/528 (41.10%), Postives = 305/528 (57.77%), Query Frame = 1 Query: 544 FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 +LPPHP IE +RA L KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + KY A+ L +Y+E+ K ++E RNA+P RK++K NV++T+ W+R + S +DY+++L +++ C PH+ + ++SVE IC K+Y++S EY R+R HL L ++ I + + N + L C+P+ L+ P ++ + + E+ K +V + ++ HF KLE LY S DDP F +R+WCL++RY G +G G Q ALPV VFE LN+ F V+FE FASPLNCY+ Q+CSAF D D +FGS GP L F PV+GSFEANPPFCEE + V + E LL+ S LSFI+F+P+WRDPP ALT +E S F RHQMT+ A EHEYR + + E+ ++ H T V+FLQNN+GF +W PTTER+ EL+A Y Sbjct: 197 YLPPHPEIELQRAQLTTKLRQHYHELCSQREGIEPPRESFNRWLLERKVVDKGVDPLLPSECDPAVSPSMFREVMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMIESRNATPDSRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQCGPHVTAVAKDSVEGICSKIYHISAEYVRRIRQAHLNLLKECNITVDGV----------------------------ENAEVQDRLVYCYPVRLSIASPP----QPRVELHFENEVACLRYKGEMVKV----------SRGHFNKLELLYRYSCIDDPRFEKFLSRVWCLIKRYQVMFG--SGVNEGTGLQGALPVPVFEALNKQFGVSFECFASPLNCYYKQFCSAFPDIDGFFGSRGPFLSFSPVSGSFEANPPFCEEFMDAMVTHFEDLLEKSSEPLSFIIFVPEWRDPPTPALTRMESSRFRRHQMTVPAFEHEYRSGS---------QHVCKREEMYYKAVHGTAVIFLQNNAGFAKWEPTTERIQELLAAY 671 HSP 2 Score: 57.7658 bits (138), Expect = 4.808e-8 Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 154 NSSYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL 327 +SS +P T + +I+ +LP+ L+ AGW K WSKRENR YY+N+ T SLW++ Sbjct: 22 SSSQAAPLTPSTSKAIQ-----ELPDELIQAGWAKCWSKRENRPYYFNRFTNQSLWEM 74
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Cavefish
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:103029407]) HSP 1 Score: 419.083 bits (1076), Expect = 1.020e-134 Identity = 217/528 (41.10%), Postives = 304/528 (57.58%), Query Frame = 1 Query: 544 FLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 +LPPHP IE +RA L KLR + C RE I PP SFNRWLL+ K +D G DP+ PS CD ++ SM RE++ +P + + KY A+ L +Y+E+ K ++E RNA+P RK++K NV++T+ W+R + S +DY+++L +++ C PH+ + ++SVE IC K+Y++S EY R+R HL L ++ I + N + L C+P+ L+ P ++ + + E+ K +V + ++ HF KLE LY S DDP F +R+WCL++RY G +G G Q ALPV VFE LN+ F V+FE FASPLNCY+ Q+CSAF D D +FGS GP L F PV+GSFEANPPFCEE + V + E LL+ S LSFI+F+P+WRDPP ALT +E S F RHQMT+ A EHEYR + + E+ ++ H T V+FLQNN+GF +W PTTER+ EL+A Y Sbjct: 185 YLPPHPEIELQRAQLTTKLRQHYHELCSQREGIEPPRESFNRWLLERKVVDKGVDPLLPSECDPAVSPSMFREVMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMIESRNATPDSRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQCGPHVTAVAKDSVEGICSKIYHISAEYVRRIRQAHLNLLKECNITV-------------------------------ENAEVQDRLVYCYPVRLSIASPP----QPRVELHFENEVACLRYKGEMVKV----------SRGHFNKLELLYRYSCIDDPRFEKFLSRVWCLIKRYQVMFG--SGVNEGTGLQGALPVPVFEALNKQFGVSFECFASPLNCYYKQFCSAFPDIDGFFGSRGPFLSFSPVSGSFEANPPFCEEFMDAMVTHFEDLLEKSSEPLSFIIFVPEWRDPPTPALTRMESSRFRRHQMTVPAFEHEYRSGS---------QHVCKREEMYYKAVHGTAVIFLQNNAGFAKWEPTTERIQELLAAY 656 HSP 2 Score: 57.7658 bits (138), Expect = 4.153e-8 Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 154 NSSYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDL 327 +SS +P T + +I+ +LP+ L+ AGW K WSKRENR YY+N+ T SLW++ Sbjct: 22 SSSQAAPLTPSTSKAIQ-----ELPDELIQAGWAKCWSKRENRPYYFNRFTNQSLWEM 74
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Sea Lamprey
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:553360]) HSP 1 Score: 375.941 bits (964), Expect = 3.831e-119 Identity = 210/526 (39.92%), Postives = 295/526 (56.08%), Query Frame = 1 Query: 553 PHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACP-CPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 PHP +E RA L +LR Q+ C RE + P SFNRWLL+ K ID G DP+ PS C+ + SM RE+L +P + + KY + AK QL +Y+E+ K +++ RNASP RKI+K NV+ET W+R E S +DY+++L ++R C PH+ ++ +ESVE IC K++ LS +Y R+R +L + ++N + L + + L C P L+ P PL ++ + + ++ + +V I + +F KLE LY + + DDP F R+WCLL+RY + GS G ++ ALPV VFE L+R F V FE FASPLNCYF QYCSAF DTD YFGS GP L+F PV+GSFEANPPF EEL+ V++ E L+ +S LSFIVF+P+WR+P AL +E S F R Q+ + A EHEYR + ++ R+ H T ++FLQN++GF RW PT +RL L+ Y Sbjct: 177 PHPEVELFRAQLTVRLRHQYQELCQQREGVDAPRESFNRWLLERKVIDKGRDPMLPSDCEPVVSVSMFREILNDIPIRLSRIKYRDDAKKQLFKYAEAAKRMIDNRNASPDSRKIVKWNVEETFNWLRKEPSPSKEDYLDRLDHLRRQCGPHLAEVAKESVEGICAKIFTLSCDYVKRIRDKNLDMLKENKLAL----------------------PEEAAAVAVAVPPAVDRLVYCFPARLSIPPWPL-----PRVEMHTENDMTCLRYRGEMVKI----------NQNYFNKLEHLYRLGSTDDPRFEKFLARVWCLLRRYRQTMFGVGGSEGAGLH-GALPVPVFEALHRHFGVTFECFASPLNCYFRQYCSAFADTDGYFGSRGPILDFNPVSGSFEANPPFGEELMNAMVDHFENLMSSSTEPLSFIVFVPEWREPVTPALLRMEESRFKRRQVLVPAFEHEYRNG---------AQHVCKGEDLHIRAVHGTAIIFLQNDAGFARWEPTADRLRLLLEAY 655 HSP 2 Score: 55.8398 bits (133), Expect = 3.817e-8 Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNEL 336 DLP+ L+ GW K WS+RENR Y+YN+ T SLW+L L Sbjct: 10 QDLPDELIQGGWSKCWSRRENRPYFYNRFTKQSLWELPAL 49
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Sea Lamprey
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:553360]) HSP 1 Score: 374.4 bits (960), Expect = 6.107e-119 Identity = 228/633 (36.02%), Postives = 326/633 (51.50%), Query Frame = 1 Query: 217 HDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYN----------------------------SITKRKASGD---SDEINQKRACYRSNIHIEPLLGPAFVPGSLY-------NFVSSKYIPMVKGR------RPNKSVF--------LPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLAC-PCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYR 1956 DLP+ L+ GW K WS+RENR Y+YN+ T SLW+L L + + ++ KR+ S + R+ +EP + + +F +S+++P+V R P +V PHP +E RA L +LR Q+ C RE + P SFNRWLL+ K ID G DP+ PS C+ + SM RE+L +P + + KY + AK QL +Y+E+ K +++ RNASP RKI+K NV+ET W+R E S +DY+++L ++R C PH+ ++ +ESVE IC K++ LS +Y R+R +L + ++N + L + + L C P L+ P PL ++ + + ++ + +V I + +F KLE LY + + DDP F R+WCLL+RY + GS G ++ ALPV VFE L+R F V FE FASPLNCYF QYCSAF DTD YFGS GP L+F PV+GSFEANPPF EEL+ V++ E L+ +S LSFIVF+P+WR+P AL +E S F R Q+ + A EHEYR Sbjct: 47 QDLPDELIQGGWSKCWSRRENRPYFYNRFTKQSLWELPALGQHDVISDPLGLNAAPVGGVPGAPAAGATGASAEDAALRKRRLSEEIGAGVAGAASAVSKRTKAPMEPKTEASIGATQSFKLYCFNFSFKNSEFLPLVTNRIYWNLEVPTNAVIKERGLFDTFHPHPEVELFRAQLTVRLRHQYQELCQQREGVDAPRESFNRWLLERKVIDKGRDPMLPSDCEPVVSVSMFREILNDIPIRLSRIKYRDDAKKQLFKYAEAAKRMIDNRNASPDSRKIVKWNVEETFNWLRKEPSPSKEDYLDRLDHLRRQCGPHLAEVAKESVEGICAKIFTLSCDYVKRIRDKNLDMLKENKLAL----------------------PEEAAAVAVAVPPAVDRLVYCFPARLSIPPWPL-----PRVEMHTENDMTCLRYRGEMVK----------INQNYFNKLEHLYRLGSTDDPRFEKFLARVWCLLRRYRQTMFGVGGSEGAGLH-GALPVPVFEALHRHFGVTFECFASPLNCYFRQYCSAFADTDGYFGSRGPILDFNPVSGSFEANPPFGEELMNAMVDHFENLMSSSTEPLSFIVFVPEWREPVTPALLRMEESRFKRRQVLVPAFEHEYR 641
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Medaka
Match: pcif1 (PDX1 C-terminal inhibiting factor 1 [Source:NCBI gene;Acc:101156006]) HSP 1 Score: 415.616 bits (1067), Expect = 6.644e-133 Identity = 224/534 (41.95%), Postives = 308/534 (57.68%), Query Frame = 1 Query: 526 RPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVY 2127 RP+ ++ LPPHP IE +RA L+ KLR + C RE I PP SFNRWLL+ K ID G DP+ PS C+ I SM RE++ +P + + KY A+ L +Y+E+ K +++ RNASP RK++K N ++T+ W+R + S +DY+++L +++ C PH+ + ++SVE IC K+Y LS EY+ RLR H+ L Q +PE +P+ + + C+P+ LA P P ++ + + ++ K +V + + HF KLE LY S DDP F +R+WCLL+RY G N G+ Q ALPV+VFE LNR F V+FE FASPLNCYF QYCSAF D D +FGS GP L F PV+GSFEANPPFCEEL+ V + E LL+ S LSFI+FIP+WRDP ALT +E S F RHQ+++ A EHEYR + + ++ R+ H T V+FLQN++GF +W PT ERL EL A Y Sbjct: 211 RPS-AMDLPPHPEIELQRAQLVTKLRQHYHELCHQREGIDPPRESFNRWLLERKVIDKGQDPLLPSDCEPIISPSMFREVMNDIPIRLSRIKYKEEARKLLFKYAEAAKRMIDSRNASPESRKVVKWNAEDTMNWLRRDHSASKEDYMDRLEHLRQQCGPHVTAVAKDSVEGICSKIYQLSAEYSRRLRETHMGLLQDPATEVPE--------------------------SPQPSRLVY-----CYPVRLAIPTPSLP----RVELHFENDVACLRFKGEMVKV----------NRGHFSKLELLYRYSCIDDPRFEKFLSRVWCLLKRYQVMFGNSNNEGTGL--QGALPVSVFEALNRQFGVSFECFASPLNCYFKQYCSAFPDIDGFFGSRGPFLSFRPVSGSFEANPPFCEELMDRMVTHFEDLLEQSSEPLSFIIFIPEWRDPVTPALTRMEESRFLRHQLSVSAYEHEYRSGS---------QHVCKREDMYYRAVHGTAVLFLQNDAGFAKWAPTPERLAELTAAY 687 HSP 2 Score: 56.9954 bits (136), Expect = 8.339e-8 Identity = 29/82 (35.37%), Postives = 42/82 (51.22%), Query Frame = 1 Query: 214 AHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKRKASGDSDEINQKRACYRSNIHIEPLLGP 459 A +LP+ L+ AGW K WS+RENR YY+N+ T SLW++ L + + + A +S E N + E GP Sbjct: 38 APELPDELVQAGWAKCWSRRENRPYYFNRFTNQSLWEVPVLGQHDVISDPLGLNAAPAESGESNLGNGQRKRRSSGEQGAGP 119
BLAST of phosphorylated CTD-interacting factor 1 vs. Planmine SMEST
Match: SMESG000057164.1 (SMESG000057164.1) HSP 1 Score: 1388.63 bits (3593), Expect = 0.000e+0 Identity = 683/684 (99.85%), Postives = 683/684 (99.85%), Query Frame = 1 Query: 148 MDNSSYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTPKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFXXXXXXXXXXTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLSNNIPSRRDFDEEYVNSVS 2199 MDNSSYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLT KSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFPPNNNNPSSSTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLSNNIPSRRDFDEEYVNSVS Sbjct: 1 MDNSSYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNKITGASLWDLNELQLQESSYNSITKRKASGDSDEINQKRACYRSNIHIEPLLGPAFVPGSLYNFVSSKYIPMVKGRRPNKSVFLPPHPLIEFERANLLNKLRSQFVNSCMTRENIHPPDGSFNRWLLQMKTIDYGYDPIFPSRCDKSIGSSMKRELLLSLPFPIVKPKYLNAAKTQLIRYSESVKGLVERRNASPPCRKIIKHNVDETLRWIRSEEYRSFDDYIEKLVSIKRICQPHIQDLVRESVEKICIKMYNLSQEYTMRLRTNHLKLFQQNGIPLPEILNDLNIEHVVQNPYNDLLDIDINQLTQKSNEFINQELTPCHPIGLACPCPLFTSLNTQMTVTIQEELNISDPKASLVSIEIPDLAKFHITKCHFEKLETLYLVSTRDDPEKIAFNNRLWCLLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQYCSAFHDTDRYFGSCGPALEFFPVTGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPFNRHQMTLRAREHEYRIANFPPNNNNPSSSTRNQPEILKRSGHSTLVVFLQNNSGFQRWTPTTERLNELMAVYYTANLSNNIPSRRDFDEEYVNSVS 684
BLAST of phosphorylated CTD-interacting factor 1 vs. Planmine SMEST
Match: SMESG000072135.1 (SMESG000072135.1) HSP 1 Score: 64.3142 bits (155), Expect = 2.226e-10 Identity = 44/118 (37.29%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 1546 SFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFPQY-----CSAFHDTDRYFGSCGPALEFFPV-----TGSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRD 1869 SFG Q P V +VL F+V E FASP+N F +Y CS F DTDR FGS G FF V +G + NPPF +L+ + + ++L + F F P W D Sbjct: 252 SFGNGSYQWGDPKEVHKVLYDRFNVRHEGFASPVNSRFIEYEQTHFCSLFPDTDRVFGSLG---NFFDVDMRQHSGGWSVNPPFLNDLMKNVADRINQVLDDRCPCYFFCTF-PWWED 365
BLAST of phosphorylated CTD-interacting factor 1 vs. Planmine SMEST
Match: SMESG000035258.1 (SMESG000035258.1) HSP 1 Score: 53.9138 bits (128), Expect = 2.861e-7 Identity = 50/146 (34.25%), Postives = 68/146 (46.58%), Query Frame = 1 Query: 1504 LLQRYYSYLGCENGSFGGVINQAALPVAVFEVLNRLFDVNFEMFASPLNCYFP-----QYCSAFHDTDRYFGSCGPALEFFPVT-----GSFEANPPFCEELLLGFVNYVEKLLQNSELALSFIVFIPDWRDPPFEALTLLEVSPF 1911 +L RY S LG NGS+ Q P+ + R ++V +E FASP+N F ++CS F + D FGS G FF + G + NPPF +L N V L++ + F + P WRD E LLE S F Sbjct: 154 MLLRYES-LG--NGSY-----QWGDPMELHLAYYRHYNVRYEGFASPINSRFLTLQYCRFCSLFPEIDSQFGSLG---NFFDINLAEYPGGWSINPPFVNVVLKDAANKVISTLKSGTKSHFFCTY-PLWRDS--EGWKLLENSSF 285 The following BLAST results are available for this feature:
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of phosphorylated CTD-interacting factor 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 3
BLAST of phosphorylated CTD-interacting factor 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of phosphorylated CTD-interacting factor 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of phosphorylated CTD-interacting factor 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008994 ID=SMED30008994|Name=phosphorylated CTD-interacting factor 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2581bpback to top protein sequence of SMED30008994-orf-1 >SMED30008994-orf-1 ID=SMED30008994-orf-1|Name=SMED30008994-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=685bp MDNSSYLSPATHDSEGSIEKDYAHDLPENLLNAGWRKFWSKRENREYYYNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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