60S ribosomal protein L13-like protein

Overview
Name60S ribosomal protein L13-like protein
Smed IDSMED30008987
Length (bp)750
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60S ribosomal protein L13-like protein (SMED30008987) t-SNE clustered cells

Violin plots show distribution of expression levels for 60S ribosomal protein L13-like protein (SMED30008987) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 60S ribosomal protein L13-like protein (SMED30008987) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 60S ribosomal protein L13-like protein (SMED30008987) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30008987

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30008987h1SMcG0010939 SmedASXL_003637SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30008987h1SMcG0010939 Contig35550newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008987h1SMcG0010939 Contig35550uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
pharynxSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30008987h1SMcG0010939 dd_Smed_v4_145_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30008987h1SMcG0010939 dd_Smed_v6_145_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Human
Match: RPL13 (ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303])

HSP 1 Score: 176.022 bits (445), Expect = 1.330e-54
Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  +   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ + N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Human
Match: RPL13 (ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303])

HSP 1 Score: 176.022 bits (445), Expect = 1.330e-54
Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  +   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ + N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Human
Match: RPL13 (ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303])

HSP 1 Score: 176.022 bits (445), Expect = 1.330e-54
Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  +   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ + N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Human
Match: RPL13 (ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303])

HSP 1 Score: 128.642 bits (322), Expect = 3.503e-37
Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLV 485
            M  SR+  +   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLIL 126
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Human
Match: RPL13 (ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303])

HSP 1 Score: 98.9821 bits (245), Expect = 3.021e-25
Identity = 76/202 (37.62%), Postives = 103/202 (50.99%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKK-FKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  +   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++                                               K +++AEE   A Q +   ++ + N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHK-----------------------------------------------KGDSSAEELKLATQ-LTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 154
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Celegans
Match: rpl-13 (60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128])

HSP 1 Score: 161.77 bits (408), Expect = 1.890e-49
Identity = 89/192 (46.35%), Postives = 119/192 (61.98%), Query Frame = 3 
Query:  123 RHNQ-IANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKF-KPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVGK 692
            R NQ + N H+ K W K +KT F+QPARKLRR   R+AK   +APRP+    +  VRCP  RYN K RLGRGFSL ELK AGI++  AR +GI+VD RR N + EG + N  RLKEY   L++FP+    P K +++AEE   A Q +  D++ +++ I  +  R  T+AE+K   F  LR+ R   K  GK
Sbjct:    4 RGNQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVRCPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQ-LRGDVLPLSHTITFDEPRQVTDAERKVEIFRLLRKERADKKYRGK 194
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Celegans
Match: rpl-13 (60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128])

HSP 1 Score: 161.77 bits (408), Expect = 1.890e-49
Identity = 89/192 (46.35%), Postives = 119/192 (61.98%), Query Frame = 3 
Query:  123 RHNQ-IANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKF-KPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVGK 692
            R NQ + N H+ K W K +KT F+QPARKLRR   R+AK   +APRP+    +  VRCP  RYN K RLGRGFSL ELK AGI++  AR +GI+VD RR N + EG + N  RLKEY   L++FP+    P K +++AEE   A Q +  D++ +++ I  +  R  T+AE+K   F  LR+ R   K  GK
Sbjct:    4 RGNQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVRCPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQ-LRGDVLPLSHTITFDEPRQVTDAERKVEIFRLLRKERADKKYRGK 194
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Fly
Match: RpL13 (gene:FBgn0011272 transcript:FBtr0079888)

HSP 1 Score: 174.866 bits (442), Expect = 2.926e-54
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 3 
Query:  129 NQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQ-RVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            N I N HYHK WQ+ VKT FNQPARK+RR   R  K  A+ PRP     +P VRCPT RY+ KLR GRGF+L+ELK AGI  N+A+ +GI+VD RR+N SLE +Q N+QRLKEY + L++FP N  K    E++ EEC  A Q + P   IK N    V   R  T+ EKKF AF  LR+AR  A+ VG +A ++KE
Sbjct:    6 NMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIK-NEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Fly
Match: RpL13 (gene:FBgn0011272 transcript:FBtr0100164)

HSP 1 Score: 174.866 bits (442), Expect = 2.926e-54
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 3 
Query:  129 NQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQ-RVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            N I N HYHK WQ+ VKT FNQPARK+RR   R  K  A+ PRP     +P VRCPT RY+ KLR GRGF+L+ELK AGI  N+A+ +GI+VD RR+N SLE +Q N+QRLKEY + L++FP N  K    E++ EEC  A Q + P   IK N    V   R  T+ EKKF AF  LR+AR  A+ VG +A ++KE
Sbjct:    6 NMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIK-NEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Fly
Match: RpL13 (gene:FBgn0011272 transcript:FBtr0310482)

HSP 1 Score: 174.866 bits (442), Expect = 2.926e-54
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 3 
Query:  129 NQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQ-RVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            N I N HYHK WQ+ VKT FNQPARK+RR   R  K  A+ PRP     +P VRCPT RY+ KLR GRGF+L+ELK AGI  N+A+ +GI+VD RR+N SLE +Q N+QRLKEY + L++FP N  K    E++ EEC  A Q + P   IK N    V   R  T+ EKKF AF  LR+AR  A+ VG +A ++KE
Sbjct:    6 NMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIK-NEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Zebrafish
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:378961])

HSP 1 Score: 181.03 bits (458), Expect = 1.229e-56
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I N H+HKDWQK V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK AGIN+  AR +GISVD RRRN S E  Q NVQRLKEY   L++FPR   KP K ++T EE   A Q +   ++ I    + E ARV +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQ-LTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Zebrafish
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:378961])

HSP 1 Score: 181.03 bits (458), Expect = 1.229e-56
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I N H+HKDWQK V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK AGIN+  AR +GISVD RRRN S E  Q NVQRLKEY   L++FPR   KP K ++T EE   A Q +   ++ I    + E ARV +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQ-LTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Zebrafish
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:378961])

HSP 1 Score: 159.844 bits (403), Expect = 4.666e-49
Identity = 87/149 (58.39%), Postives = 105/149 (70.47%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQ 554
            M  SR+  I N H+HKDWQK V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK AGIN+  AR +GISVD RRRN S E  Q NVQRLKEY   L++FPR   KP K ++T EE   A Q
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQ 149
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Xenopus
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:394716])

HSP 1 Score: 181.8 bits (460), Expect = 6.590e-57
Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+ K   +APRP+    +P V+CPT RY+ K+R+GRGFSL+ELK AGIN+  AR +GISVD RRRN S EG Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ I +  + E  RV TE EK F AF +LR AR  A+  G +A K+KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQVKARLVAPRPVSGPVRPVVKCPTIRYHTKVRMGRGFSLEELKAAGINKKVARTIGISVDPRRRNRSTEGLQTNVQRLKEYRSKLIIFPRKPAAPKKGDSSAEELKLATQ-LKGPVMPIRSVYKKEKPRVITEEEKNFKAFASLRMARANARLFGIRAKKAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Xenopus
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:394716])

HSP 1 Score: 160.229 bits (404), Expect = 1.210e-48
Identity = 101/202 (50.00%), Postives = 126/202 (62.38%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+ K   +APRP+    +P V+CPT RY+ K+R+GRGFSL+ELK AGIN+  AR +GISVD RRRN S EG Q NVQRLKEY + L++FPR P         A    +  Q        + N  + E  RV TE EK F AF +LR AR  A+  G +A K+KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQVKARLVAPRPVSGPVRPVVKCPTIRYHTKVRMGRGFSLEELKAAGINKKVARTIGISVDPRRRNRSTEGLQTNVQRLKEYRSKLIIFPRKP---------ALHFMTMTQ-------NLFNVYKKEKPRVITEEEKNFKAFASLRMARANARLFGIRAKKAKE 186
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Xenopus
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:394716])

HSP 1 Score: 100.908 bits (250), Expect = 5.813e-26
Identity = 77/202 (38.12%), Postives = 103/202 (50.99%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKK-FKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+ K   +APRP+    +P V+CPT RY+ K+R+GRGFSL+ELK AGIN+                                               K +++AEE   A Q +   ++ I +  + E  RV TE EK F AF +LR AR  A+  G +A K+KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQVKARLVAPRPVSGPVRPVVKCPTIRYHTKVRMGRGFSLEELKAAGINK-----------------------------------------------KGDSSAEELKLATQ-LKGPVMPIRSVYKKEKPRVITEEEKNFKAFASLRMARANARLFGIRAKKAKE 154
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Mouse
Match: Rpl13 (ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:105922])

HSP 1 Score: 177.178 bits (448), Expect = 3.119e-55
Identity = 106/202 (52.48%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ I N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. UniProt/SwissProt
Match: sp|Q90Z10|RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio OX=7955 GN=rpl13 PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 9.274e-56
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I N H+HKDWQK V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK AGIN+  AR +GISVD RRRN S E  Q NVQRLKEY   L++FPR   KP K ++T EE   A Q +   ++ I    + E ARV +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQ-LTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. UniProt/SwissProt
Match: sp|P41125|RL13_CHICK (60S ribosomal protein L13 OS=Gallus gallus OX=9031 GN=RPL13 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 2.995e-55
Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGFSL+ELK AGIN+ +AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++ EE   A Q +   ++ I N  + E ARV +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPVAGPIRPIVRCPTVRYHKKVRAGRGFSLEELKLAGINKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEELKMATQ-LSGPVMPIRNVFKREKARVISEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. UniProt/SwissProt
Match: sp|Q9Z313|RL13_CRIGR (60S ribosomal protein L13 OS=Cricetulus griseus OX=10029 GN=RPL13 PE=2 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 7.213e-55
Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   +++I N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQRRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMRIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. UniProt/SwissProt
Match: sp|P47963|RL13_MOUSE (60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 2.182e-54
Identity = 106/202 (52.48%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ I N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. UniProt/SwissProt
Match: sp|P26373|RL13_HUMAN (60S ribosomal protein L13 OS=Homo sapiens OX=9606 GN=RPL13 PE=1 SV=4)

HSP 1 Score: 176.022 bits (445), Expect = 6.386e-54
Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  +   H+HKDWQ+ V T FNQPARK+RR  AR+AK   +APRP     +P VRCPT RY+ K+R GRGFSL+EL+ AGI++  AR +GISVD RRRN S E  Q NVQRLKEY + L++FPR P  P K +++AEE   A Q +   ++ + N  + E ARV TE EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQ-LTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. TrEMBL
Match: A0A226F274 (60S ribosomal protein L13 OS=Folsomia candida OX=158441 GN=Fcan01_03501 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.469e-62
Identity = 112/198 (56.57%), Postives = 136/198 (68.69%), Query Frame = 3 
Query:  123 RHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKK-FKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            R+N I N H+HKDWQ  VKT FNQPARK RR   R  K   +APRP     +P VRCPT RY+ K+R GRGF+L+E+K AG+NR +AR +GISVDHRR+N SLE  Q NVQRLKEY + L++FP N  KP K ++TAEE   A Q V   ++ I    R E ARVPTE EK FGAF A R+AR  AK VG +A ++KE
Sbjct:    5 RNNMIPNGHFHKDWQSYVKTWFNQPARKKRRHLKRLEKARTIAPRPAAGPLRPVVRCPTVRYHTKVRSGRGFTLEEIKRAGLNRGFARTIGISVDHRRKNRSLESLQQNVQRLKEYRSKLILFPLNAKKPAKGDSTAEEIKLASQ-VKGTLMPIRQTSRKEKARVPTEEEKNFGAFTAQRKARIDAKLVGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. TrEMBL
Match: A0A2R5LF22 (60S ribosomal protein L13 OS=Ornithodoros turicata OX=34597 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.202e-61
Identity = 106/194 (54.64%), Postives = 134/194 (69.07%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            M   R+N + N H+HKDWQ+ VKT FNQP RK RR   R  K  A+APRP+K   +P VRCPT RYN K RLG+GFS++ELK AGI + YAR VGI+VD+RR N S+E +QLNVQRLKEY + L++FPR   KP K + TAEE   A Q + H I+ I  +   + +RVPTE EKK+ A+  LRQA+ RA+  G
Sbjct:    1 MAPKRNNMVPNGHFHKDWQRYVKTWFNQPMRKKRRHIKRIKKARAIAPRPVKGNLRPIVRCPTFRYNTKQRLGKGFSVEELKAAGIPKRYARTVGIAVDYRRHNKSVESRQLNVQRLKEYKSKLILFPRKQSKPGKLDATAEEMKVATQ-LKHVIMPIKKSKHHDKSRVPTEDEKKYQAYVHLRQAKARARLWG 193
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. TrEMBL
Match: A6N9Y6 (60S ribosomal protein L13 OS=Ornithodoros parkeri OX=140564 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.202e-61
Identity = 106/194 (54.64%), Postives = 134/194 (69.07%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            M   R+N + N H+HKDWQ+ VKT FNQP RK RR   R  K  A+APRP+K   +P VRCPT RYN K RLG+GFS++ELK AGI + YAR VGI+VD+RR N S+E +QLNVQRLKEY + L++FPR   KP K + TAEE   A Q + H I+ I  +   + +RVPTE EKK+ A+  LRQA+ RA+  G
Sbjct:    1 MAPKRNNMVPNGHFHKDWQRYVKTWFNQPMRKKRRHIKRIKKARAIAPRPVKGNLRPIVRCPTFRYNTKQRLGKGFSVEELKAAGIPKRYARTVGIAVDYRRHNKSVESRQLNVQRLKEYKSKLILFPRKQSKPGKLDATAEEMKVATQ-LKHVIMPIKKSKHHDKSRVPTEDEKKYQAYVHLRQAKARARLWG 193
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. TrEMBL
Match: A0A165PD41 (60S ribosomal protein L13 OS=Exidia glandulosa HHB12029 OX=1314781 GN=EXIGLDRAFT_715481 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.144e-60
Identity = 107/193 (55.44%), Postives = 130/193 (67.36%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            MG   +N +   H+ KDWQ+ VKT FNQP RKLRR NARKAKTA L  RPL   +P+VR PT RYN K+R GRGF+L ELKEAGI R  AR VGI VDHRRRNLS EGK+LNV+RLK Y + L+VFPRN  KP K+++T ++ A+A  R     I +      EA R  TE E++F A+  LR AR  A+  G
Sbjct:    1 MGFRHNNVLPANHFRKDWQRRVKTWFNQPGRKLRRRNARKAKTALLGARPLTLLRPAVRAPTLRYNTKIREGRGFTLAELKEAGIGRKQARGVGIVVDHRRRNLSEEGKKLNVERLKAYKSRLVVFPRNAKKPAKSDSTGDDLAAATTRAS---IPLPAPYVAEAPRKITEEEREFKAYRTLRDARAAARYDG 190
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. TrEMBL
Match: A0A132AHY0 (60S ribosomal protein L13-like protein OS=Sarcoptes scabiei OX=52283 GN=QR98_0091600 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.593e-60
Identity = 102/191 (53.40%), Postives = 131/191 (68.59%), Query Frame = 3 
Query:  123 RHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEEC--ASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            R+  + N H+HKDWQ+ VKT FNQP RK RR NAR AK   +APRP  K +P V CPT +YN K+RLGRGFS+DELK AGI R +A  +GI VD+RR+N S+E  Q NV RLKEY + L++FP+N  K    E+ AEE   A  V  +   I+K   +++ E ARVPT+ EKKF A+H+LR+AR  A+ VG
Sbjct:    5 RNGMVPNGHFHKDWQRFVKTWFNQPMRKKRRHNARVAKAKLIAPRPTHKLRPLVHCPTIKYNSKIRLGRGFSIDELKSAGIPRKFAPTIGIRVDYRRKNRSVESIQRNVARLKEYRSRLILFPKNAKKLRSGESNAEELKMAQQVSGIIFPIVKNKKSLKSEKARVPTDEEKKFNAYHSLRRARANARLVG 195
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Cavefish
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:103043439])

HSP 1 Score: 179.489 bits (454), Expect = 3.473e-56
Identity = 107/202 (52.97%), Postives = 136/202 (67.33%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I N H+HKDWQK V+T FNQPARKLRR  AR+AK   +APRP+    +P+VRCPT RY  K+R GRGFSL+ELK AGINR  AR +GI+VD RRRN S E  Q+NVQRLK Y + L++FPR    P K +++ EE   A Q +   I+ + N  + E ARV +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPAVRCPTIRYQSKIRAGRGFSLEELKAAGINRKVARTIGIAVDPRRRNRSTESLQVNVQRLKVYRSKLIIFPRKASAPKKGDSSEEEIKMATQ-LTGPIMPLKNVYKREKARVISEDEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Sea Lamprey
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:378961])

HSP 1 Score: 97.0561 bits (240), Expect = 2.699e-26
Identity = 49/82 (59.76%), Postives = 58/82 (70.73%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPL-KKFKPSVRCPTNRYNMKLRLGRGFSLDELK 353
            M   R+N I N H+HKDWQK V+T FNQPARK RR   R AK   +APRP+    +P VRCPT RY+ K+R GRGFSL+ELK
Sbjct:    1 MAPKRNNMIPNAHFHKDWQKRVRTWFNQPARKERRRKNRLAKARKIAPRPVGGDLRPIVRCPTLRYHTKVRSGRGFSLEELK 82
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Sea Lamprey
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:378961])

HSP 1 Score: 85.5001 bits (210), Expect = 1.608e-21
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 3 
Query:  387 VGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            +GI+VDHRRRN S E  Q NVQRLK Y + L++FP+   KP K +++ EE   A Q +   ++ I+ + RVE AR  TE EK F AF  LR AR  A+  G
Sbjct:    2 IGIAVDHRRRNKSTESLQANVQRLKIYRSKLILFPKKASKPAKGDSSPEELKLATQ-LKGTVMPISQHQRVEKARKITEDEKNFKAFVTLRVARSHARLFG 101
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Yeast
Match: RPL13A (Ribosomal 60S subunit protein L13A; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13A has a paralog, RPL13B, that arose from the whole genome duplication [Source:SGD;Acc:S000002240])

HSP 1 Score: 130.568 bits (327), Expect = 4.009e-38
Identity = 85/193 (44.04%), Postives = 112/193 (58.03%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            M +S++  I   H+ K WQ+ VK +F+Q  +K+ R NAR  + A +APRPL   +P VR PT +YN K+R GRGF+L E+K AG+   YAR +GI+VDHRR+N + E    NVQRLKEY + ++VFPRN   P      AE+  SA    P  I +   +  VEA  V    E    AF  LR AR   K  G
Sbjct:    1 MAISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARATRAAKIAPRPLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRNGKAP-----EAEQVLSAAATFP--IAQPATD--VEARAVQDNGE---SAFRTLRLARSEKKFRG 181
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Yeast
Match: RPL13B (Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication [Source:SGD;Acc:S000004750])

HSP 1 Score: 120.939 bits (302), Expect = 2.214e-34
Identity = 85/193 (44.04%), Postives = 113/193 (58.55%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            M +S++  I   H+ K WQ+ VK +F+Q  +K+ R NAR A+ A +APRPL   +P VR PT +YN K+R GRGF+L E+K AG+   YAR +GI+VDHRR+N + E    NVQRLKEY + ++VFPR+   P      AE+  SA    P  I +   +  VEA  V    E    AF  LR AR   K  G
Sbjct:    1 MAISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAARAAKIAPRPLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRDGKAP-----EAEQVLSAAATFP--IAQPATD--VEARAVQDNGE---SAFRTLRLARSEKKFRG 181
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Nematostella
Match: EDO41580 (60S ribosomal protein L13 [Source:UniProtKB/TrEMBL;Acc:A7S405])

HSP 1 Score: 182.956 bits (463), Expect = 6.692e-58
Identity = 99/200 (49.50%), Postives = 126/200 (63.00%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQ------RVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG 689
            M   R+N I N H+HKDWQ+ VKT F+QP RK RR  AR+ K A +APRP+    +P VRCPT +YN K+R GRGF+LDELK AGI R  A  +GI+VDHRR+N S E  Q NVQRLKEY + L+VFPR   KP + ++ A + A+AVQ       +P + + I        AR  TE EKKF  F  +R  R  A+ +G
Sbjct:    1 MAPKRNNIIPNGHFHKDWQRYVKTWFDQPGRKKRRRVARQTKAAKIAPRPVAGSLRPIVRCPTFKYNTKVRAGRGFTLDELKAAGIPRKVAPTIGIAVDHRRKNRSAESLQANVQRLKEYKSKLIVFPRKANKPKQGDSEAADLANAVQLQGPVMPIPQESVPIK-------ARPITEDEKKFSVFKTMRIERANARLIG 193
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Nematostella
Match: EDO28721 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5P0])

HSP 1 Score: 98.9821 bits (245), Expect = 6.159e-27
Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELK 353
            M   R+N I N H+HKDWQ+ VKT F+QP RK RR  AR+ K A +APRP+    +P VRCPT +YN K+R GRGF+LDELK
Sbjct:    1 MAPKRNNIIPNGHFHKDWQRYVKTWFDQPGRKKRRRVARQIKAAKIAPRPVAGSLRPIVRCPTFKYNTKVRAGRGFTLDELK 82
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Medaka
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:101156237])

HSP 1 Score: 172.94 bits (437), Expect = 1.500e-53
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I N H+HKDWQ+ V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK AGI++  AR +GI+VD RRRN S E  Q NVQRLKEY + L++FPR    P K +++ EE   A Q +   ++ I    + E AR+ +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILNPHFHKDWQRRVRTWFNQPARKIRRRKARQAKARRIAPRPIAGPLRPQVRCPTIRYHTKVRSGRGFTLEELKAAGIHKKTARTIGIAVDPRRRNRSTESLQANVQRLKEYRSKLILFPRKASAPKKGDSSEEELKMATQ-LSGPVMPIKTVYKKEKARIISEDEKNFKAFASLRMARANARLFGIRAKRAKE 201
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Medaka
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:101156237])

HSP 1 Score: 171.014 bits (432), Expect = 3.586e-52
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLK-KFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            M  SR+  I N H+HKDWQ+ V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK AGI++  AR +GI+VD RRRN S E  Q NVQRLKEY + L++FPR    P K +++ EE   A Q +   ++ I    + E AR+ +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:    1 MAPSRNGMILNPHFHKDWQRRVRTWFNQPARKIRRRKARQAKARRIAPRPIAGPLRPQVRCPTIRYHTKVRSGRGFTLEELKAAGIHKKTARTIGIAVDPRRRNRSTESLQANVQRLKEYRSKLILFPRKASAPKKGDSSEEELKMATQ-LSGPVMPIKTVYKKEKARIISEDEKNFKAFASLRMARANARLFGIRAKRAKE 201
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Medaka
Match: rpl13 (ribosomal protein L13 [Source:NCBI gene;Acc:101156237])

HSP 1 Score: 94.3597 bits (233), Expect = 8.532e-23
Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 3 
Query:  324 GRGFSLDEL--KEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVG-KAVKSKE 710
            GRG ++  L  + AGI++  AR +GI+VD RRRN S E  Q NVQRLKEY + L++FPR    P K +++ EE   A Q +   ++ I    + E AR+ +E EK F AF +LR AR  A+  G +A ++KE
Sbjct:  129 GRGITMVSLHCEAAGIHKKTARTIGIAVDPRRRNRSTESLQANVQRLKEYRSKLILFPRKASAPKKGDSSEEELKMATQ-LSGPVMPIKTVYKKEKARIISEDEKNFKAFASLRMARANARLFGIRAKRAKE 259

HSP 2 Score: 86.6557 bits (213), Expect = 7.809e-20
Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKK-FKPSVRCPTNRYNMKLRLGRGFSLDELK 353
            M  SR+  I N H+HKDWQ+ V+T FNQPARK+RR  AR+AK   +APRP+    +P VRCPT RY+ K+R GRGF+L+ELK
Sbjct:    1 MAPSRNGMILNPHFHKDWQRRVRTWFNQPARKIRRRKARQAKARRIAPRPIAGPLRPQVRCPTIRYHTKVRSGRGFTLEELK 82
[Close]
BLAST of 60S ribosomal protein L13-like protein vs. Planmine SMEST
Match: SMESG000036992.1 (SMESG000036992.1)

HSP 1 Score: 411.379 bits (1056), Expect = 5.320e-148
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 3 
Query:  111 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVGKAVKSKEE 713
            MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVGKAVKSKEE
Sbjct:    1 MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRPLKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHRRRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRVPHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVGKAVKSKEE 201
The following BLAST results are available for this feature:
BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPL131.330e-5451.49ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL131.330e-5451.49ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL131.330e-5451.49ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL133.503e-3757.14ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL133.021e-2537.62ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl-131.890e-4946.3560S ribosomal protein L13 [Source:UniProtKB/Swiss... [more]
rpl-131.890e-4946.3560S ribosomal protein L13 [Source:UniProtKB/Swiss... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpL132.926e-5452.28gene:FBgn0011272 transcript:FBtr0079888[more]
RpL132.926e-5452.28gene:FBgn0011272 transcript:FBtr0100164[more]
RpL132.926e-5452.28gene:FBgn0011272 transcript:FBtr0310482[more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl131.229e-5652.97ribosomal protein L13 [Source:NCBI gene;Acc:378961... [more]
rpl131.229e-5652.97ribosomal protein L13 [Source:NCBI gene;Acc:378961... [more]
rpl134.666e-4958.39ribosomal protein L13 [Source:NCBI gene;Acc:378961... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl136.590e-5752.48ribosomal protein L13 [Source:NCBI gene;Acc:394716... [more]
rpl131.210e-4850.00ribosomal protein L13 [Source:NCBI gene;Acc:394716... [more]
rpl135.813e-2638.12ribosomal protein L13 [Source:NCBI gene;Acc:394716... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Rpl133.119e-5552.48ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:1... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q90Z10|RL13_DANRE9.274e-5652.9760S ribosomal protein L13 OS=Danio rerio OX=7955 G... [more]
sp|P41125|RL13_CHICK2.995e-5552.4860S ribosomal protein L13 OS=Gallus gallus OX=9031... [more]
sp|Q9Z313|RL13_CRIGR7.213e-5552.4860S ribosomal protein L13 OS=Cricetulus griseus OX... [more]
sp|P47963|RL13_MOUSE2.182e-5452.4860S ribosomal protein L13 OS=Mus musculus OX=10090... [more]
sp|P26373|RL13_HUMAN6.386e-5451.4960S ribosomal protein L13 OS=Homo sapiens OX=9606 ... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A226F2742.469e-6256.5760S ribosomal protein L13 OS=Folsomia candida OX=1... [more]
A0A2R5LF228.202e-6154.6460S ribosomal protein L13 OS=Ornithodoros turicata... [more]
A6N9Y68.202e-6154.6460S ribosomal protein L13 OS=Ornithodoros parkeri ... [more]
A0A165PD411.144e-6055.4460S ribosomal protein L13 OS=Exidia glandulosa HHB... [more]
A0A132AHY01.593e-6053.4060S ribosomal protein L13-like protein OS=Sarcopte... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl133.473e-5652.97ribosomal protein L13 [Source:NCBI gene;Acc:103043... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rpl132.699e-2659.76ribosomal protein L13 [Source:NCBI gene;Acc:378961... [more]
rpl131.608e-2147.52ribosomal protein L13 [Source:NCBI gene;Acc:378961... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPL13A4.009e-3844.04Ribosomal 60S subunit protein L13A; not essential ... [more]
RPL13B2.214e-3444.04Ribosomal 60S subunit protein L13B; not essential ... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO415806.692e-5849.5060S ribosomal protein L13 [Source:UniProtKB/TrEMB... [more]
EDO287216.159e-2758.54Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl131.500e-5350.00ribosomal protein L13 [Source:NCBI gene;Acc:101156... [more]
rpl133.586e-5250.00ribosomal protein L13 [Source:NCBI gene;Acc:101156... [more]
rpl138.532e-2343.18ribosomal protein L13 [Source:NCBI gene;Acc:101156... [more]
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BLAST of 60S ribosomal protein L13-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000036992.15.320e-148100.00SMESG000036992.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30008987 ID=SMED30008987|Name=60S ribosomal protein L13-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=750bp
TTCATTAGTAATTAGTAATCTTTTCTATAATAAGAATAATTAAATATTAT
CTAAAATCTTGTTTTAATAAGATATTCACATAAATTAGTTGTAATTTAAA
TTAATAAGAAATGGGTTTAAGCCGACATAACCAGATCGCTAATGTTCATT
ATCACAAGGATTGGCAAAAGATGGTGAAAACCAACTTTAACCAACCTGCC
AGAAAACTACGTAGATCTAATGCCAGAAAGGCTAAAACAGCTGCTTTGGC
ACCAAGACCATTGAAAAAATTCAAACCATCAGTTAGATGCCCAACCAACA
GATACAACATGAAGTTACGTTTAGGCCGTGGATTTTCTCTTGATGAACTT
AAGGAAGCTGGAATTAACAGAAATTACGCCAGACAAGTTGGTATCTCTGT
CGATCACAGACGTAGAAATCTTTCACTTGAAGGAAAACAATTAAATGTTC
AACGATTGAAGGAATATATGAATAACTTGTTAGTTTTCCCTAGAAATCCC
CTTAAGCCAACTAAAAATGAAAATACCGCTGAAGAATGTGCATCTGCTGT
ACAAAGAGTTCCACACGATATTATTAAAATCAATAATAATATCCGAGTTG
AAGCAGCACGAGTTCCAACTGAAGCTGAAAAGAAATTTGGTGCTTTCCAC
GCTTTGAGACAAGCTCGCAAACGCGCAAAGACTGTTGGAAAAGCAGTTAA
GTCAAAAGAGGAATAATAATTTTTCAATATAATCTGGATTAAGAAAAAAA
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protein sequence of SMED30008987-orf-1

>SMED30008987-orf-1 ID=SMED30008987-orf-1|Name=SMED30008987-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=202bp
MGLSRHNQIANVHYHKDWQKMVKTNFNQPARKLRRSNARKAKTAALAPRP
LKKFKPSVRCPTNRYNMKLRLGRGFSLDELKEAGINRNYARQVGISVDHR
RRNLSLEGKQLNVQRLKEYMNNLLVFPRNPLKPTKNENTAEECASAVQRV
PHDIIKINNNIRVEAARVPTEAEKKFGAFHALRQARKRAKTVGKAVKSKE
E*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR001380Ribosomal_L13e
IPR018256Ribosomal_L13e_CS
Vocabulary: cellular component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0022625cytosolic large ribosomal subunit
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: biological process
TermDefinition
GO:0006412translation
GO:0051726regulation of cell cycle
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001380Ribosomal protein L13ePFAMPF01294Ribosomal_L13ecoord: 8..187
e-value: 8.4E-69
score: 231.0
IPR001380Ribosomal protein L13ePANTHERPTHR1172260S RIBOSOMAL PROTEIN L13coord: 3..200
IPR018256Ribosomal protein L13e, conserved sitePROSITEPS01104RIBOSOMAL_L13Ecoord: 70..84