Geranylgeranyl transferase type-1 subunit beta

Overview
NameGeranylgeranyl transferase type-1 subunit beta
Smed IDSMED30008852
Length (bp)1253
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Geranylgeranyl transferase type-1 subunit beta (SMED30008852) t-SNE clustered cells

Violin plots show distribution of expression levels for Geranylgeranyl transferase type-1 subunit beta (SMED30008852) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Geranylgeranyl transferase type-1 subunit beta (SMED30008852) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Geranylgeranyl transferase type-1 subunit beta (SMED30008852) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30008852

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30008852SMESG000057312.1 dd_Smed_v4_4004_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008852SMESG000057312.1 Contig28693newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008852SMESG000057312.1 Contig28693uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Human
Match: PGGT1B (protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895])

HSP 1 Score: 237.269 bits (604), Expect = 4.906e-74
Identity = 132/324 (40.74%), Postives = 194/324 (59.88%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDLSRV+K   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +++I R  +YD G  Q    ESHGGST+C IASL ++ KL   F E   N+  + RW I RQ  G+HGRP+K  D+CY+FW+GA+LK+L   Q  +F    ++I ST + L GGF K  +   S  D +H Y  + G+S
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR--IKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLS 330
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Human
Match: RABGGTB (Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796])

HSP 1 Score: 134.42 bits (337), Expect = 2.517e-35
Identity = 98/318 (30.82%), Postives = 148/318 (46.54%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCD-LKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            +E + D I+ Y  K  +Y       Y  S  + +     GL +++ +  L   ++ EI+ +I   Q                    C  +   I    H+  T S  V ++ L D ++ +D   V+E  K LQ  EDG F   +   E D RF F A+A+ A++     ++V+  + F+L C N+DGGFG RP  ESH G  YC    L I S+L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L +FI +  +   GGF    +      DP HT   +AG+S L
Sbjct:   20 LEKHADYIASYGSKKDDY------EYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQ------------------HECGGISASIGHDPHLLYTLSA-VQILTLYDSINVIDVNKVVEYVKGLQK-EDGSFAGDI-WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL------HQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGF---ADRPGDMVDPFHTLFGIAGLSLL 301
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Human
Match: PGGT1B (protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895])

HSP 1 Score: 128.642 bits (322), Expect = 1.519e-33
Identity = 74/191 (38.74%), Postives = 115/191 (60.21%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILR 611
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDLSRV+K   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +++I R
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRR 202
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Human
Match: FNTB (farnesyltransferase, CAAX box, beta [Source:HGNC Symbol;Acc:HGNC:3785])

HSP 1 Score: 94.3597 bits (233), Expect = 2.221e-20
Identity = 84/285 (29.47%), Postives = 133/285 (46.67%), Query Frame = 3 
Query:  363 HVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDV-DAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRIENLST 1160
            H+  TY+ +  L I+G + +   +++  +L+   +L+   DG F   +   E DVR  + A AS A + +  T D+ +    +I RCQN++GG G  P  E+HGG T+C +A+L IL +      E S N   +L+W+ +RQ     GF GR +K  D CY+FW    L +L                 +    +L ++I    +  AGG   L   G S  D  HT  CL+G+S         S + LH+   + +  N     LQP  P  N+   ++   +T
Sbjct:  149 HLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP-DGSFLMHVGG-EVDVRSAYCA-ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKR------ERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGL--LDKPGKS-RDFYHTCYCLSGLSIAQ---HFGSGAMLHDV-VLGVPEN----ALQPTHPVYNIGPDKVIQATT 413
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Human
Match: CHURC1-FNTB (CHURC1-FNTB readthrough [Source:HGNC Symbol;Acc:HGNC:42960])

HSP 1 Score: 93.5893 bits (231), Expect = 3.749e-20
Identity = 84/285 (29.47%), Postives = 133/285 (46.67%), Query Frame = 3 
Query:  363 HVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDV-DAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRIENLST 1160
            H+  TY+ +  L I+G + +   +++  +L+   +L+   DG F   +   E DVR  + A AS A + +  T D+ +    +I RCQN++GG G  P  E+HGG T+C +A+L IL +      E S N   +L+W+ +RQ     GF GR +K  D CY+FW    L +L                 +    +L ++I    +  AGG   L   G S  D  HT  CL+G+S         S + LH+   + +  N     LQP  P  N+   ++   +T
Sbjct:  183 HLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP-DGSFLMHVG-GEVDVRSAYCA-ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKR------ERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGL--LDKPGKS-RDFYHTCYCLSGLSIAQ---HFGSGAMLHDV-VLGVPEN----ALQPTHPVYNIGPDKVIQATT 447
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Celegans
Match: Y48E1B.3 (pep chromosome:WBcel235:II:13547751:13567999:-1 gene:WBGene00013002.1 transcript:Y48E1B.3a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y48E1B.3)

HSP 1 Score: 216.468 bits (550), Expect = 1.441e-66
Identity = 130/338 (38.46%), Postives = 191/338 (56.51%), Query Frame = 3 
Query:  102 YFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDL-SEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIIN--DFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQ 1106
            +  + +N  P  + + +TSR  I  FA+S LDLL  +D+L + + +   IDWIY LQ  N   G + GFRG     +C+  N  Y   ++  TYS L+ L ILGDDL +VD+  +L++ K  Q  ++GCF +     E+D+RF+F A+A   I++     T+D   +  F+ +  N DGG GQ P +ESHGGST+CAIASL + ++L         + + ++RW I +Q  GFHGR HK DDSCY FWIGA+LK+L    L+    L +F+        GGFCK    G  ++D +HTY  +A + SL+ +   N    +H S  +SM   + I  LQ
Sbjct:   35 FLIRHLNVFPQPYNTLETSRNTIFLFAISSLDLLGELDNLLTPERRQAYIDWIYGLQFTN---GNVCGFRGS---HSCE--NSGYDEANLAQTYSALLSLAILGDDLKKVDRKAILKTVKTAQR-DNGCFWSQGVGSESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQDIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREFLMICQHPHIGGFCKYPEPG-GYSDILHTYFSIAAL-SLLGEPAVNP---VHPSLNVSMRVAERIARLQ 358
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Celegans
Match: Y48E1B.3 (pep chromosome:WBcel235:II:13547739:13567971:-1 gene:WBGene00013002.1 transcript:Y48E1B.3a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y48E1B.3)

HSP 1 Score: 216.468 bits (550), Expect = 1.441e-66
Identity = 130/338 (38.46%), Postives = 191/338 (56.51%), Query Frame = 3 
Query:  102 YFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDL-SEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIIN--DFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQ 1106
            +  + +N  P  + + +TSR  I  FA+S LDLL  +D+L + + +   IDWIY LQ  N   G + GFRG     +C+  N  Y   ++  TYS L+ L ILGDDL +VD+  +L++ K  Q  ++GCF +     E+D+RF+F A+A   I++     T+D   +  F+ +  N DGG GQ P +ESHGGST+CAIASL + ++L         + + ++RW I +Q  GFHGR HK DDSCY FWIGA+LK+L    L+    L +F+        GGFCK    G  ++D +HTY  +A + SL+ +   N    +H S  +SM   + I  LQ
Sbjct:   35 FLIRHLNVFPQPYNTLETSRNTIFLFAISSLDLLGELDNLLTPERRQAYIDWIYGLQFTN---GNVCGFRGS---HSCE--NSGYDEANLAQTYSALLSLAILGDDLKKVDRKAILKTVKTAQR-DNGCFWSQGVGSESDMRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQDIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREFLMICQHPHIGGFCKYPEPG-GYSDILHTYFSIAAL-SLLGEPAVNP---VHPSLNVSMRVAERIARLQ 358
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Celegans
Match: Y48E1B.3 (pep chromosome:WBcel235:II:13547751:13553464:-1 gene:WBGene00013002.1 transcript:Y48E1B.3b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y48E1B.3)

HSP 1 Score: 135.961 bits (341), Expect = 8.155e-38
Identity = 78/198 (39.39%), Postives = 112/198 (56.57%), Query Frame = 3 
Query:  519 VRFIFSALASCAIIN--DFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQ 1106
            +RF+F A+A   I++     T+D   +  F+ +  N DGG GQ P +ESHGGST+CAIASL + ++L         + + ++RW I +Q  GFHGR HK DDSCY FWIGA+LK+L    L+    L +F+        GGFCK    G  ++D +HTY  +A + SL+ +   N    +H S  +SM   + I  LQ
Sbjct:    1 MRFVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQDIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREFLMICQHPHIGGFCKYPEPG-GYSDILHTYFSIAAL-SLLGEPAVNP---VHPSLNVSMRVAERIARLQ 193
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Celegans
Match: ggtb-1 (Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992])

HSP 1 Score: 138.658 bits (348), Expect = 2.957e-37
Identity = 96/321 (29.91%), Postives = 160/321 (49.84%), Query Frame = 3 
Query:   75 EMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVT--MTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDD 1025
            +++ + I++Y K   +Y   + E     RV  + + ++ +DL  +++ +S +   EI++++   +  +          GG+ P+           GH +  +   C V  +I+ + + + D   + E  K LQ  EDG FC  L   E D RF   +LA+C ++   ST+++D+ V F++RC N DGGFG RP  ESH G  YC + +L I  +L+        +++    WL  RQ +  G +GRP K  D CY++W+ ASL +LG    ID  ++  FI +  ++  GGF          ADP HT   +A +S   DD
Sbjct:   27 DLHANFINQYEKNKNSYHYIMAEHL---RVSGIYWCVNAMDLSKQLERMSTE---EIVNYVLGCRNTD----------GGYGPA----------PGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKGLQQ-EDGSFCGDLS-GEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEI------DRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPG---DCADPFHTVFGIAALSLFGDD 310
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Celegans
Match: ggtb-1 (Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992])

HSP 1 Score: 130.954 bits (328), Expect = 1.651e-34
Identity = 89/310 (28.71%), Postives = 155/310 (50.00%), Query Frame = 3 
Query:   75 EMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVT--MTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYL 992
            +++ + I++Y K   +Y   + E     RV  + + ++ +DL  +++ +S +   EI++++   +  +          GG+ P+           GH +  +   C V  +I+ + + + D   + E  K LQ  EDG FC  L   E D RF   +LA+C ++   ST+++D+ V F++RC N DGGFG RP  ESH G  YC + +L I  +L+        +++    WL  RQ +  G +GRP K  D CY++W+ ASL +LG    ID  ++  FI +  ++  GGF        SF + +  ++
Sbjct:   27 DLHANFINQYEKNKNSYHYIMAEHL---RVSGIYWCVNAMDLSKQLERMSTE---EIVNYVLGCRNTD----------GGYGPA----------PGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKGLQQ-EDGSFCGDLS-GEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEI------DRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPGDCVSFLNNIQKFI 302
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Fly
Match: betaggt-I (gene:FBgn0015000 transcript:FBtr0330714)

HSP 1 Score: 215.312 bits (547), Expect = 9.398e-66
Identity = 130/356 (36.52%), Postives = 198/356 (55.62%), Query Frame = 3 
Query:   69 KIEMNPDLISKYFK---KFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYD-LQIFNSRSGRLEGFRG--GFFPSNCDLK----NQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQ 1106
            + +  P L+SK+ K   +F+N +P+   S+D +R  I+ FA+ GLD+LN +  +  Q + +IIDWIY  L +         GF G     P   D +     + Y  GH+ MTY+ L  L+ LGDDLSR+D+  +++    +Q  E G F A +D  E D+RF++ A   C +++ +  V+ + +  FI R   YD GF Q    E+HGG+T+CA+A+L +  +L+     ++     M RWLI RQ +GF GRP+K  D+CY+FWIGASL +L   +L D+    +FI ST + L GGF K      +  DP HTYL L G++   +   S  N +L+    +SMAA   ++ L 
Sbjct:    4 RTDTEPVLLSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLGDDLSRLDRKSIVDGVAAVQKPE-GSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRL---DATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCILDGFELTDYARNREFILSTQDKLIGGFAKWPQ---ATPDPFHTYLGLCGLAFTGEPGLSPVNPSLN----MSMAAYAHLQHLH 348
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Fly
Match: betaggt-I (gene:FBgn0015000 transcript:FBtr0078991)

HSP 1 Score: 215.312 bits (547), Expect = 1.307e-65
Identity = 131/358 (36.59%), Postives = 199/358 (55.59%), Query Frame = 3 
Query:   69 KIEMNPDLISKYFK---KFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYD-LQIFNSRSGRLEGFRG--GFFPSNCD------LKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQ 1106
            + +  P L+SK+ K   +F+N +P+   S+D +R  I+ FA+ GLD+LN +  +  Q + +IIDWIY  L +         GF G     P   D      ++N  Y  GH+ MTY+ L  L+ LGDDLSR+D+  +++    +Q  E G F A +D  E D+RF++ A   C +++ +  V+ + +  FI R   YD GF Q    E+HGG+T+CA+A+L +  +L+     ++     M RWLI RQ +GF GRP+K  D+CY+FWIGASL +L   +L D+    +FI ST + L GGF K      +  DP HTYL L G++   +   S  N +L+    +SMAA   ++ L 
Sbjct:    4 RTDTEPVLLSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRN--YQWGHLAMTYTSLAVLVTLGDDLSRLDRKSIVDGVAAVQKPE-GSFSACIDGSEDDMRFVYCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRL---DATTVERMKRWLIFRQMDGFQGRPNKPVDTCYSFWIGASLCILDGFELTDYARNREFILSTQDKLIGGFAKWP---QATPDPFHTYLGLCGLAFTGEPGLSPVNPSLN----MSMAAYAHLQHLH 348
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Fly
Match: betaggt-II (gene:FBgn0028970 transcript:FBtr0077631)

HSP 1 Score: 107.457 bits (267), Expect = 1.122e-25
Identity = 92/316 (29.11%), Postives = 142/316 (44.94%), Query Frame = 3 
Query:  105 FKKFVNYIPSVFESYDTSRVIILQF--------ALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDF-STVDVDAVVSFILRCQNY-DGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            F K V YI +  +  D     + +F          + LD++ +++ L   ++  II+++   Q  N+         GGF P      + +Y     T++   ++C     D L  +D+  V+     LQ   DG F       E D RF F A+AS  ++     T+DV+  V F+L C N  DGGFG +P  ESH G  YC +    +  +L++       + + +  WL  RQ    G +GRP K  D CY++W+ ASL ++G    I    L  FI S  +   GGF     TG +  D  HT   + G+S L
Sbjct:   31 FWKHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERL---ERKSIIEFVKRCQCPNT---------GGFAPCEGHDPHLLY-----TLSAIQILCTY---DALEEIDREAVVRFVVGLQQP-DGSFFGD-KWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLL------DVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGFS--DRTG-NMPDIFHTLFGIGGLSLL 315
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Fly
Match: CG17565 (gene:FBgn0038424 transcript:FBtr0083286)

HSP 1 Score: 97.0561 bits (240), Expect = 9.553e-22
Identity = 94/368 (25.54%), Postives = 168/368 (45.65%), Query Frame = 3 
Query:  102 YFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLS--RVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVS---FILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQ--YE-GFHGRPHKDDDSCYTFWIGASLKML-----GYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADP------MHTYLCLAGIS-SLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRI 1145
            Y    +  +PS +E  D+SR   + + L    LL+   +  +Q  N ++ ++      N RS                         H+  TY+ +  L I+G + +   +D+  +++   ++++S DG F   +D  E DVR  + A++   ++N    V  +       +I +CQ Y+GGFG  P  E+HGG T+C IA L +L++       +  ++  +L+W + RQ  YE GF GR +K  D CY+FW+GA++ +      G  + ++  +LFD +E+  E +    C  K +G     P       HT   L+G+S +   +C S       + + +    N+L+    P  P  N+  K +
Sbjct:   68 YLDAMLRRLPSNYECLDSSRAWCVYWILQAAQLLSF--NFDDQTLNHVVQFLS-----NCRS------------PTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPTLVQFLFSVRDS-DGSFRLHVD-GETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNE------ADKCDRQALLKWTLRRQMTYEGGFQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEH-TLFD-VEALQEYIL--LCCQKQSGGLIDKPGKPQDLYHTCYTLSGVSIAQHSECAS-------SPQVLGDTINELL----PTHPLFNIPPKSV 393
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Zebrafish
Match: pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85])

HSP 1 Score: 207.994 bits (528), Expect = 1.683e-63
Identity = 119/292 (40.75%), Postives = 171/292 (58.56%), Query Frame = 3 
Query:  162 VIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIF-NSRSGRLE--GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            + I  F+LSGLD+L  +D +   D++ +I+WIY LQI   +    L+  GFRG       +  S        Y SGHVTMTY+ L CL+ILGDDL RVD+   +   + LQ  EDG F A  +  E D+RF++ A   C +++D+S +D    + +I R  ++D G GQ    ESHGGST+CA+ASL ++ KL   F E    +  + RW + RQ  GF GRP+K  D+CY+FW+GA+L++L   Q  +F    ++I ST + L GGF K  +   S  DP+HTY  + G+S
Sbjct:    2 LTIAFFSLSGLDVLGALDVV---DRHSLIEWIYSLQILPTADQSNLQRCGFRGSSHIGVPYSSSKGPGAPHPYDSGHVTMTYTGLACLLILGDDLGRVDRAACVSGLRALQ-LEDGSFYAVPEGSENDMRFVYCAACICFMLDDWSGMDRQKTIDYIRRSTSFDFGIGQGAGLESHGGSTFCAVASLCMMGKLQEVFSERELGR--LRRWCVLRQQNGFQGRPNKPVDTCYSFWVGATLQLLDVFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDPLHTYFGICGLS 284
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Zebrafish
Match: rabggtb (Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116])

HSP 1 Score: 136.732 bits (343), Expect = 2.229e-36
Identity = 99/321 (30.84%), Postives = 151/321 (47.04%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCD-LKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDD 1025
            ++ + D I+ Y  K  +Y       Y  S  + +     GL +++ +  LS  ++ EII++I   Q                   +C  +   I    H+  T S  + ++ L D ++ +D   V+E  K LQ  EDG F A     E D RF F A+A+ A++     ++VD  V F++ C N+DGGFG RP  ESH G  YC    L +  +L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L +FI +  +   GGF           DP HT   +AG+S L D+
Sbjct:   20 LDKHADYIAAYGSKKDDY------EYTLSEYLRMSGIYWGLTVMDLMGQLSRMNREEIIEFIKSCQ------------------HDCGGISASIGHDPHLLYTLSA-IQILSLYDSVNAIDVDKVVEYVKGLQQ-EDGSF-AGDKWGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCCTGFLSVTGQL------HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDKAKLRNFILACQDEETGGFADRPG---DMVDPFHTLFGVAGLSLLGDE 304
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Zebrafish
Match: rabggtb (Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116])

HSP 1 Score: 114.005 bits (284), Expect = 1.325e-29
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 3 
Query:  510 EADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLA 1001
            E D RF F A+A+ A++     ++VD  V F++ C N+DGGFG RP  ESH G  YC    L +  +L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L +FI +  +   GGF    +      DP HT   +A
Sbjct:   16 EIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCCTGFLSVTGQL------HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDKAKLRNFILACQDEETGGF---ADRPGDMVDPFHTLFGVA 172
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Zebrafish
Match: fntb (farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220])

HSP 1 Score: 106.301 bits (264), Expect = 7.449e-25
Identity = 92/366 (25.14%), Postives = 157/366 (42.90%), Query Frame = 3 
Query:  102 YFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRI 1145
            Y KK + ++   +E  D SR  +  + L  L+LL   + +     +++  ++   Q                               H+  TY+ +  L ILG + +   +++  +L+   +++   DG F   +   E DVR  + A +  ++ N  +    D   ++I+ CQN++GG G  P  E+HGG T+C  A+L IL K      E+  +   +LRW+ +RQ     GF GR +K  D CY+FW    L +L                 + +  +L ++I    +N  GG   L   G S  D  HT  CL+G+S      +   N +LHN   +    N+L     P  P  N+C +++
Sbjct:   66 YLKKGLRHLSDAYECLDASRPWLCYWILHSLELLE--EPVPAAVASDVCQFLARCQA-----------------PTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQP-DGSFVMHIGG-EVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVPGLEAHGGYTFCGTAALVILGK------EHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALFKEGDSTLSVSSWMFERKALQEYILLCCQNPGGGL--LDKPGKS-RDFYHTSYCLSGLSV----AQHFGNKDLHNELILGRDENKLA----PTHPVYNICPEKV 393
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Zebrafish
Match: fntb (farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220])

HSP 1 Score: 100.138 bits (248), Expect = 1.309e-22
Identity = 88/349 (25.21%), Postives = 150/349 (42.98%), Query Frame = 3 
Query:  102 YFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLI 1094
            Y KK + ++   +E  D SR  +  + L  L+LL   + +     +++  ++   Q                               H+  TY+ +  L ILG + +   +++  +L+   +++   DG F   +   E DVR  + A +  ++ N  +    D   ++I+ CQN++GG G  P  E+HGG T+C  A+L IL K      E+  +   +LRW+ +RQ     GF GR +K  D CY+FW    L +L                 + +  +L ++I    +N  GG   L   G S  D  HT  CL+G+S      +   N +LHN   +    N+L+
Sbjct:   66 YLKKGLRHLSDAYECLDASRPWLCYWILHSLELLE--EPVPAAVASDVCQFLARCQA-----------------PTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQP-DGSFVMHIGG-EVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVPGLEAHGGYTFCGTAALVILGK------EHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALFKEGDSTLSVSSWMFERKALQEYILLCCQNPGGGL--LDKPGKS-RDFYHTSYCLSGLSV----AQHFGNKDLHNELILGRDENKLV 380
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Xenopus
Match: pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:NCBI gene;Acc:493499])

HSP 1 Score: 225.713 bits (574), Expect = 1.384e-69
Identity = 128/318 (40.25%), Postives = 186/318 (58.49%), Query Frame = 3 
Query:   84 PDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSR-SGRLE--GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            PD   +YF++ +  +P    S +TSR+ I  FALSGLD+L   D L+  +K+EII+WIY LQ+  +     L+  GFRG       F PS        + SGH+ MTY+ +  L+ILGDDLSRV+K   L   + LQ   DG FCA  +  E D+RF++ A   C ++ND+S +D++  + +I R  +Y+   GQ    E+HGGST+C IASL ++ KL   F E   N+  + RW + RQ  GFHGRP+K  D+CY+FW+GA+L +L   +  +F    +FI ST + + GGF K  +   S  D +H Y  + G+S
Sbjct:   20 PDRHVRYFQRSLQLLPEQCASLETSRLTIAFFALSGLDML---DSLNVINKSEIIEWIYSLQVLPTEDKSNLDRCGFRGSSCLGLPFNPSKGHGLYHPHDSGHIAMTYTAIASLLILGDDLSRVNKEACLAGLRALQ-LPDGSFCAVPEGSENDMRFVYCAACICYMLNDWSGMDMERSIDYIRRSMSYENALGQGAGLEAHGGSTFCGIASLCLMGKLEEVFSEKELNR--IGRWCLMRQQNGFHGRPNKPVDTCYSFWVGATLMLLDIFKYTNFEKNRNFILSTQDRIVGGFAKWPD---SHPDALHAYFGICGLS 328
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Xenopus
Match: pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:NCBI gene;Acc:493499])

HSP 1 Score: 211.46 bits (537), Expect = 1.907e-60
Identity = 120/293 (40.96%), Postives = 172/293 (58.70%), Query Frame = 3 
Query:  159 RVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSR-SGRLE--GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            R+ I  FALSGLD+L   D L+  +K+EII+WIY LQ+  +     L+  GFRG       F PS        + SGH+ MTY+ +  L+ILGDDLSRV+K   L   + LQ   DG FCA  +  E D+RF++ A   C ++ND+S +D++  + +I R  +Y+   GQ    E+HGGST+C IASL ++ KL   F E   N+  + RW + RQ  GFHGRP+K  D+CY+FW+GA+L +L   +  +F    +FI ST + + GGF K  +   S  D +H Y  + G+S
Sbjct:  486 RLTIAFFALSGLDML---DSLNVINKSEIIEWIYSLQVLPTEDKSNLDRCGFRGSSCLGLPFNPSKGHGLYHPHDSGHIAMTYTAIASLLILGDDLSRVNKEACLAGLRALQLP-DGSFCAVPEGSENDMRFVYCAACICYMLNDWSGMDMERSIDYIRRSMSYENALGQGAGLEAHGGSTFCGIASLCLMGKLEEVFSEKELNR--IGRWCLMRQQNGFHGRPNKPVDTCYSFWVGATLMLLDIFKYTNFEKNRNFILSTQDRIVGGFAKWPD---SHPDALHAYFGICGLS 769
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Xenopus
Match: sgo1 (shugoshin 1 [Source:Xenbase;Acc:XB-GENE-940795])

HSP 1 Score: 130.954 bits (328), Expect = 4.909e-34
Identity = 92/278 (33.09%), Postives = 136/278 (48.92%), Query Frame = 3 
Query:  189 GLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            GL +++ + +L   +K EI+ +I   Q             GGF  S       I    H+  T S  V ++ L D LS VD   +++  ++LQ  EDG F A     E D RF F A+A+ A++     ++++  + F+L C N+DGGFG RP  ESH G  YC    L I  +L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L  F+ +  +   GGF    +      DP HT   +AG+S L
Sbjct:   66 GLTVMDLMGELQRMNKEEILAFIKSCQ----------HDCGGFSAS-------IGHDPHLLYTLSA-VQILTLYDSLSAVDSNRIVDYVQSLQK-EDGSF-AGDKWGEIDTRFSFCAVATLALLGRLDAINIEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQL------HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRLFVLACQDEETGGF---ADRPGDMVDPFHTLFGIAGLSLL 314
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Xenopus
Match: sgo1 (shugoshin 1 [Source:Xenbase;Acc:XB-GENE-940795])

HSP 1 Score: 130.954 bits (328), Expect = 5.129e-34
Identity = 92/278 (33.09%), Postives = 136/278 (48.92%), Query Frame = 3 
Query:  189 GLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            GL +++ + +L   +K EI+ +I   Q             GGF  S       I    H+  T S  V ++ L D LS VD   +++  ++LQ  EDG F A     E D RF F A+A+ A++     ++++  + F+L C N+DGGFG RP  ESH G  YC    L I  +L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L  F+ +  +   GGF    +      DP HT   +AG+S L
Sbjct:   57 GLTVMDLMGELQRMNKEEILAFIKSCQHDC----------GGFSAS-------IGHDPHLLYTLSA-VQILTLYDSLSAVDSNRIVDYVQSLQK-EDGSF-AGDKWGEIDTRFSFCAVATLALLGRLDAINIEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQL------HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRLFVLACQDEETGGF---ADRPGDMVDPFHTLFGIAGLSLL 305
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Xenopus
Match: sgo1 (shugoshin 1 [Source:Xenbase;Acc:XB-GENE-940795])

HSP 1 Score: 130.954 bits (328), Expect = 8.794e-34
Identity = 99/317 (31.23%), Postives = 148/317 (46.69%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            +E +   I  Y  K  +Y       Y  S  + +     GL +++ + +L   +K EI+ +I   Q             GGF  S       I    H+  T S  V ++ L D LS VD   +++  ++LQ  EDG F A     E D RF F A+A+ A++     ++++  + F+L C N+DGGFG RP  ESH G  YC    L I  +L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L  F+ +  +   GGF    +      DP HT   +AG+S L
Sbjct:   56 LEKHAQYIESYGAKKDDY------EYCMSEYLRMSGIYWGLTVMDLMGELQRMNKEEILAFIKSCQHDC----------GGFSAS-------IGHDPHLLYTLSA-VQILTLYDSLSAVDSNRIVDYVQSLQK-EDGSF-AGDKWGEIDTRFSFCAVATLALLGRLDAINIEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQL------HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRLFVLACQDEETGGF---ADRPGDMVDPFHTLFGIAGLSLL 337
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Mouse
Match: Pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:MGI Symbol;Acc:MGI:1917514])

HSP 1 Score: 237.654 bits (605), Expect = 2.718e-74
Identity = 133/324 (41.05%), Postives = 193/324 (59.57%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDL RVDK   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +S+I R  +YD G  Q    ESHGGST+C IASL ++ KL   F E   N+  + RW I RQ  G+HGRP+K  D+CY+FW+GA+LK+L   Q  +F    ++I ST + L GGF K  +   S  D +H Y  + G+S
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLSRCGFRGSSYLGIPFNPSKNPGAAHPYDSGHIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR--IKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLS 330
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Mouse
Match: Pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:MGI Symbol;Acc:MGI:1917514])

HSP 1 Score: 129.028 bits (323), Expect = 8.236e-34
Identity = 75/191 (39.27%), Postives = 114/191 (59.69%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILR 611
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDL RVDK   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +S+I R
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLSRCGFRGSSYLGIPFNPSKNPGAAHPYDSGHIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRR 202
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Mouse
Match: Rabggtb (Rab geranylgeranyl transferase, b subunit [Source:MGI Symbol;Acc:MGI:99537])

HSP 1 Score: 127.872 bits (320), Expect = 3.977e-33
Identity = 95/318 (29.87%), Postives = 145/318 (45.60%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCD-LKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            +E + D I+ Y  K  +Y       Y  S  + +     GL +++ +  L   ++ EI+ +I   Q                    C  +   I    H+  T S  V ++ L D +  ++   V+   ++LQ  EDG F   +   E D RF F A+A+ A++     ++V+  + F+L C N+DGGFG RP  ESH G  YC    L I S+L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L  FI +  +   GGF           DP HT   +AG+S L
Sbjct:   20 LEKHADYIASYGSKKDDY------EYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKSCQ------------------HECGGISASIGHDPHLLYTLSA-VQILTLYDSVHVINVDKVVAYVQSLQK-EDGSFAGDI-WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL------HQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG---DMVDPFHTLFGIAGLSLL 301
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Mouse
Match: Rabggtb (Rab geranylgeranyl transferase, b subunit [Source:MGI Symbol;Acc:MGI:99537])

HSP 1 Score: 127.487 bits (319), Expect = 6.456e-33
Identity = 95/318 (29.87%), Postives = 145/318 (45.60%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCD-LKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            +E + D I+ Y  K  +Y       Y  S  + +     GL +++ +  L   ++ EI+ +I   Q                    C  +   I    H+  T S  V ++ L D +  ++   V+   ++LQ  EDG F   +   E D RF F A+A+ A++     ++V+  + F+L C N+DGGFG RP  ESH G  YC    L I S+L      +  N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L  FI +  +   GGF           DP HT   +AG+S L
Sbjct:   28 LEKHADYIASYGSKKDDY------EYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKSCQ------------------HECGGISASIGHDPHLLYTLSA-VQILTLYDSVHVINVDKVVAYVQSLQK-EDGSFAGDI-WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQL------HQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPG---DMVDPFHTLFGIAGLSLL 309
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Mouse
Match: Fntb (farnesyltransferase, CAAX box, beta [Source:MGI Symbol;Acc:MGI:1861305])

HSP 1 Score: 97.8265 bits (242), Expect = 9.118e-22
Identity = 85/285 (29.82%), Postives = 133/285 (46.67%), Query Frame = 3 
Query:  363 HVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDV-DAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRIENLST 1160
            H+  TY+ +  L I+G + +   +++  +L+   +L+   DG F   +   E DVR  + A AS A + +  T D+ +    +I RCQN++GG G  P  E+HGG T+C +A+L IL K      E S N   +L+W+ +RQ     GF GR +K  D CY+FW    L +L                 +    +L ++I    +  AGG   L   G S  D  HT  CL+G+S         S + LH+     M       +LQP  P  N+  +++   +T
Sbjct:  149 HLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQP-DGSFLMHVGG-EVDVRSAYCA-ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKK------ERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGL--LDKPGKS-RDFYHTCYCLSGLSIAQ---HFGSGAMLHD-----MVMGVPENVLQPTHPVYNIGPEKVIQATT 413
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. UniProt/SwissProt
Match: sp|P53610|PGTB1_RAT (Geranylgeranyl transferase type-1 subunit beta OS=Rattus norvegicus OX=10116 GN=Pggt1b PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 6.573e-74
Identity = 133/324 (41.05%), Postives = 194/324 (59.88%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSR-SGRLE--GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +     L+  GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDLSRVDK   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +S+I R  +YD G  Q    ESHGGST+C IASL ++ KL   F E   N+  + RW I RQ  G+HGRP+K  D+CY+FW+GA+LK+L   Q  +F    ++I ST + L GGF K  +   S  D +H Y  + G+S
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR--IKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLS 330
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. UniProt/SwissProt
Match: sp|Q8BUY9|PGTB1_MOUSE (Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus OX=10090 GN=Pggt1b PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.901e-73
Identity = 133/324 (41.05%), Postives = 193/324 (59.57%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDL RVDK   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +S+I R  +YD G  Q    ESHGGST+C IASL ++ KL   F E   N+  + RW I RQ  G+HGRP+K  D+CY+FW+GA+LK+L   Q  +F    ++I ST + L GGF K  +   S  D +H Y  + G+S
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLSRCGFRGSSYLGIPFNPSKNPGAAHPYDSGHIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR--IKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLS 330
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. UniProt/SwissProt
Match: sp|P53609|PGTB1_HUMAN (Geranylgeranyl transferase type-1 subunit beta OS=Homo sapiens OX=9606 GN=PGGT1B PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 2.356e-73
Identity = 132/324 (40.74%), Postives = 194/324 (59.88%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDLSRV+K   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +++I R  +YD G  Q    ESHGGST+C IASL ++ KL   F E   N+  + RW I RQ  G+HGRP+K  D+CY+FW+GA+LK+L   Q  +F    ++I ST + L GGF K  +   S  D +H Y  + G+S
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR--IKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLS 330
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. UniProt/SwissProt
Match: sp|Q5EAD5|PGTB1_BOVIN (Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus OX=9913 GN=PGGT1B PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.046e-72
Identity = 132/324 (40.74%), Postives = 194/324 (59.88%), Query Frame = 3 
Query:   66 QKIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNS--RSGRLE-GFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++++   D   ++F++ +  +P  + S +TSR+ I  FALSGLD+L+ +D +   +K++II+WIY LQ+  +  RS     GFRG       F PS        Y SGH+ MTY+ L CL+ILGDDLSRV+K   L   + LQ  EDG FCA  +  E D+RF++ A   C ++N++S +D+   +++I R  +YD G  Q    ESHGGST+C IASL ++ KL   F E   N+  + RW I RQ  G+HGRP+K  D+CY+FW+GA+LK+L   Q  +F    ++I ST + L GGF K  +   S  D +H Y  + G+S
Sbjct:   16 ERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVV---NKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQ-LEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR--IKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLS 330
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. UniProt/SwissProt
Match: sp|Q55DA3|PGTB1_DICDI (Geranylgeranyl transferase type-1 subunit beta OS=Dictyostelium discoideum OX=44689 GN=pggt1b PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 8.075e-63
Identity = 123/326 (37.73%), Postives = 185/326 (56.75%), Query Frame = 3 
Query:   78 MNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSG---RLE--GFRGGFFPSN---CDLKNQIYMSGHVTM-------TYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            +N + ++K+F++ +N +P+ + S   + + ++ F +SGLDLLN+ D L E++K +II+W+Y  QI  S+      LE  GFRG  F      CD       +G +         TY  L+ L ILGDD S V+K  +++S +  Q   DG    + +  + D+R +FSA A   I++D+S ++ ++ + +I  C +Y+  FGQ P++E+HGG TYCAIASL +L +L+V  P     K  +  WL+ +Q  GF GR +KD D+CY FWIGASL M+    LIDF S+  FI S      GG  K         D MH+YL L G+S
Sbjct:    5 INEEKLAKFFQRSLNALPAPYTSGLPNHLSLIFFVVSGLDLLNKTDIL-EKEKQDIINWVYSRQILPSKDNPEINLENCGFRGYNFLGQEFCCDKSVHTSENGPLEYDLPSTPNTYCALLILRILGDDFSGVNKKAIIDSLRKRQRESDGAISGSPNVGDYDLRHLFSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASLSLLGRLDVLEP----FKEQLTFWLVKKQITGFCGRTNKDPDTCYAFWIGASLMMIDRYDLIDFASINAFIGSAQHEAIGGVAKEPG---QLPDVMHSYLSLVGLS 322
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. TrEMBL
Match: A0A267GLT5 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig015285g2 PE=4 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 6.983e-91
Identity = 149/308 (48.38%), Postives = 201/308 (65.26%), Query Frame = 3 
Query:   93 ISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLE---GFRGGFF---PSN--CDLKNQI-YMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTY 989
            ++KY ++ +  +PS    YD +R++   FA+S +D+L+R  +L+ Q   EIIDW+Y LQI  S SGR     GFRG      P++   D +N + Y + H+TM ++ L  L++LGDDL RVD+  VL     LQ    GCF A    PE+D+RF+FSA  SC  +NDF+ +DVD  V+F+L CQ Y+GGFGQRP  E+HGGST+CAIASLK+L +L+   P +S  ++ +LRWL  RQ+ GFHGRP+KDDDSCYTFWIGASL  LG   LID  +L +F+ S Y  + GGF K        ADP+HTY
Sbjct:   41 LTKYCRRVLTCLPSHCSGYDQNRLVFAWFAISTMDMLDRTQELNRQ---EIIDWVYSLQILPS-SGRPVANCGFRGAPLLGSPADPHLDAENPLPYDASHLTMVFAGLGILLMLGDDLQRVDRDAVLSGVAALQTPA-GCFTAGKFAPESDLRFVFSACVSCYYLNDFTKIDVDRSVAFLLACQTYEGGFGQRPGSEAHGGSTFCAIASLKLLGRLDSALPADSRQRSRLLRWLCQRQHRGFHGRPYKDDDSCYTFWIGASLAALGRANLIDRSALVEFVFSCYSGMEGGFSKYPGDS---ADPLHTY 340
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. TrEMBL
Match: A0A267F9I5 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig003594g3 PE=4 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.111e-90
Identity = 149/308 (48.38%), Postives = 201/308 (65.26%), Query Frame = 3 
Query:   93 ISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLE---GFRGGFF---PSN--CDLKNQI-YMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTY 989
            ++KY ++ +  +PS    YD +R++   FA+S +D+L+R  +L+ Q   EIIDW+Y LQI  S SGR     GFRG      P++   D +N + Y + H+TM ++ L  L++LGDDL RVD+  VL     LQ    GCF A    PE+D+RF+FSA  SC  +NDF+ +DVD  V+F+L CQ Y+GGFGQRP  E+HGGST+CAIASLK+L +L+   P +S  ++ +LRWL  RQ+ GFHGRP+KDDDSCYTFWIGASL  LG   LID  +L +F+ S Y  + GGF K        ADP+HTY
Sbjct:   41 LTKYCRRVLTCLPSHCSGYDQNRLVFAWFAISTMDMLDRTQELNRQ---EIIDWVYSLQILPS-SGRPVANCGFRGAPLLGSPADPHLDAENPLPYDASHLTMVFAGLGILLMLGDDLQRVDRDAVLSGVAALQTPA-GCFTAGKFAPESDLRFVFSACVSCYYLNDFTKIDVDRSVAFLLACQTYEGGFGQRPGSEAHGGSTFCAIASLKLLGRLDSALPADSRQRSRLLRWLCQRQHRGFHGRPYKDDDSCYTFWIGASLAALGRANLIDRSALVEFVFSCYSGMDGGFSKYPGDS---ADPLHTY 340
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. TrEMBL
Match: A0A067RGQ2 (Geranylgeranyl transferase type-1 subunit beta OS=Zootermopsis nevadensis OX=136037 GN=L798_07188 PE=4 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.340e-81
Identity = 141/338 (41.72%), Postives = 211/338 (62.43%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIF---NSRSGRLEGFRGG---FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNI--MLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQ 1088
            KYF++F+N +P    SYD++R+ I  FA+SGLD+LN +D L E+ K  IIDWIY LQ+    +  S +  GF+G     FP +    + +Y  GH+ MTY+ L  L+ILGDDLSRV +  ++E  K LQ  EDG FCA L   E+D+RF++ A   C I+ND+S ++++  + +I+R  +YD G  Q P  ESHGG+T+CA+A+L ++++LN  F     NK +  + RW + RQ  GF GRP+K  D+CY+FW+GA LK+LG  ++ID+    +FI ST +++ GG  K  +T     DP+HTY+ L G+S +    K      +H +  +S  A+Q
Sbjct:   17 KYFQRFLNLLPRRLSSYDSTRLTIAFFAISGLDILNALDVLDEKKKRLIIDWIYRLQVVPDGSEPSWKRCGFQGSSTLIFPPDETKCSPLYECGHLAMTYTGLASLVILGDDLSRVYRAAIIEGVKALQQ-EDGSFCATLAGSESDMRFLYCAACICYILNDWSGMNIEKTMDYIVRSMSYDYGIAQAPELESHGGTTFCAVATLALMNQLNTCF----TNKQLDGLRRWGLARQISGFQGRPNKPVDTCYSFWLGAVLKILGVFEMIDYQQNKNFILSTQDSIVGGLSKWVDTT---PDPLHTYMGLCGLSLM----KIEGLLEVHPALNVSQRAHQ 342
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. TrEMBL
Match: A0A1I8IPY6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.852e-81
Identity = 134/260 (51.54%), Postives = 171/260 (65.77%), Query Frame = 3 
Query:  237 NEIIDWIYDLQIFNSRSGRLE---GFRGGFF---PSN--CDLKNQI-YMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTY 989
             EIIDW+Y LQI  S SGR     GFRG      P++   D +N + Y + H+TM ++ L  L++LGDDL RVD+  VL     LQ    GCF A    PE+D+RF+FSA  SC  +NDF+ +DVD  V+F+L CQ Y+GGFGQRP  E+HGGST+CAIASLK+L +L+   P +S  ++ +LRWL  RQ+ GFHGRP+KDDDSCYTFWIGASL  LG   LID  +L +F+ S Y  + GGF K        ADP+HTY
Sbjct:    1 QEIIDWVYSLQILPS-SGRPVANCGFRGAPLLGSPADPHLDAENPLPYDASHLTMVFAGLGILLMLGDDLQRVDRDAVLSGVAALQTPA-GCFTAGKFAPESDLRFVFSACVSCYYLNDFTKIDVDRSVAFLLACQTYEGGFGQRPGSEAHGGSTFCAIASLKLLGRLDSALPADSRQRSRLLRWLCQRQHRGFHGRPYKDDDSCYTFWIGASLAALGRANLIDRSALVEFVFSCYSGMEGGFSKYPGDS---ADPLHTY 255
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. TrEMBL
Match: A0A1B6I2N9 (Uncharacterized protein OS=Homalodisca liturata OX=320908 GN=g.46094 PE=4 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.596e-80
Identity = 139/327 (42.51%), Postives = 197/327 (60.24%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQ--------IYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLH 1055
            KYF   +N IPS    +D +R+ I  FA+SGLD+LN +D+LS   K EI DWIY LQI  + +      R GF  SN    N+        +Y  GH+ MTY+ +  L+ILGDDLSRVD+   ++  + LQ  +DG FCA L   E D+RF++ A   C +++D+S +D++  +S+I R  +YD G    P  ESHGG TYCA+A+L ++ KLN  F         + RW I RQ  GF GRP+K +D+CY+FW+GA+LK+LG   ++DF    D++ ST     GGF K  +   S+ADPMHTYL L+G+S + +   S  N+ L+
Sbjct:   18 KYFMHHLNMIPSSLAHFDATRLTIAFFAISGLDILNGVDELSAAKKKEICDWIYSLQILPNNNEVDITKRCGFQGSNTLTYNENGERSSIPLYSCGHLAMTYTGIGSLVILGDDLSRVDRQACIQGVRALQQ-DDGSFCATLSGSENDMRFVYCAACICYMLDDWSGMDIEKTISYITRSMSYDYGIAPGPDLESHGGVTYCAVAALALMDKLNDVFTHKQLEG--LKRWTIMRQVTGFQGRPNKQEDTCYSFWVGATLKLLGIFDMVDFDKNRDYVMSTQYATTGGFSKWPD---SYADPMHTYLGLSGLSLMGEPGLSEMNAALN 338
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Cavefish
Match: pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85])

HSP 1 Score: 232.261 bits (591), Expect = 1.948e-72
Identity = 134/314 (42.68%), Postives = 187/314 (59.55%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIF----NSRSGRLEGFRGG------FFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            ++F++ +  +P  + SY+TSR+ I+ FALSGLD+L   D L   DK  +I+WIY LQ+      S  GR  GFRG       +  S        Y SGHV MTY+ L CL+ILGDDLSRV+K   L   K LQ  EDG F +  +  E D+RF++ A   C +++D+S +D    + +I +  +YD G GQ    ESHGGST+CAIA+L ++ KL   F E   N+  + RW I RQ  GFHGRP+K  D+CY+FW+GA+L++L   Q   F    ++I ST ++L GGF K  +   S  DP+HTY  + G+S
Sbjct:   23 RFFQRCLQVLPERYSSYETSRLTIVFFALSGLDVL---DALEVVDKPSLIEWIYSLQVVPTEDQSNLGRC-GFRGSSHIGVPYSTSKGPGSPHPYDSGHVAMTYTGLACLIILGDDLSRVNKEACLAGLKALQ-LEDGSFYSVPEGSENDMRFVYCAACICYMLDDWSGMDCMKAIDYIRKSMSYDNGIGQGAGLESHGGSTFCAIATLCLMGKLEDKFSERELNR--IRRWCILRQQNGFHGRPNKPVDTCYSFWVGATLELLDVFQYTHFEKNRNYILSTQDSLVGGFAKWPD---SHPDPLHTYFGICGLS 326
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Cavefish
Match: rabggtb (Rab geranylgeranyltransferase subunit beta [Source:NCBI gene;Acc:103042989])

HSP 1 Score: 135.576 bits (340), Expect = 5.444e-36
Identity = 98/321 (30.53%), Postives = 150/321 (46.73%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCD-LKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDD 1025
            ++ + D I+ Y  K  +Y       Y  S  + +     GL +++ +  L   ++ EI+D+I   Q                   +C  +   I    H+  T S  V ++ L D++  +D   V++  + LQ  EDG F A     E D RF F A+A+ A++     VDV+  V F+L C N+DGGFG RP  ESH G  YC    L I  +L      +  N +++  WL  RQ    G +GRP K  D CY++W+ A+LK++G    ID   L +FI +  +   GGF           DP HT   +AG+S + D+
Sbjct:   20 LDKHADYIAAYGSKKDDY------EYTLSEYLRMSGIYWGLTVMDLMGQLHRMNREEIVDFIKSCQ------------------HDCGGISASIGHDPHLLYTLSA-VQILTLYDNVKAIDVDKVVDYVRGLQQ-EDGSF-AGDKWGEIDTRFSFCAVATLALLGRLDAVDVEKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLSITGQL------HQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLAALKIIGRIHWIDKAKLRNFILACQDEETGGFADRPG---DMVDPFHTLFGVAGLSLMGDE 304
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Cavefish
Match: fntb (protein farnesyltransferase subunit beta [Source:NCBI gene;Acc:103033540])

HSP 1 Score: 111.694 bits (278), Expect = 9.170e-27
Identity = 98/367 (26.70%), Postives = 167/367 (45.50%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRI 1145
            +Y KK + ++   +E  D SR  +  + L  L+LL   + +     +++  ++   Q   S +G   GF GG  P             H+  TY+ +  L ILG + +   +++  +L+   +++   DG F   +   E DVR  + A +  ++ N  +    +   ++I+ CQN++GG G  P  E+HGG T+C  A+L IL K      E+  +   +LRW+ +RQ     GF GR +K  D CY+FW    L +L                 + +  +L ++I    +N AGG   L   G S  D  HT  CL+G+S      +   N +LH+   +    N+L     P  P  N+C +++
Sbjct:   67 QYLKKGLRHLSDAYECLDASRPWLCYWILHSLELLE--EPVPAAVASDVCQFLARCQ---SPTG---GFAGG--PGQ---------HAHLAPTYAAVNALCILGTEEAYNVINREKLLDFLYSVKQP-DGSFVMHVGG-EVDVRSAYCAASVASLTNIITPTLFEGTHNWIISCQNWEGGLGGVPGLEAHGGYTFCGTAALVILGK------EHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALFKDGDMTLSLSSWMFEQQALQEYILLCCQNPAGGL--LDKPGKS-RDFYHTCYCLSGLSV----AQHFGNKDLHHELILGKEENRLA----PTHPVYNICPEKV 395
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Sea Lamprey
Match: pggt1b (protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85])

HSP 1 Score: 221.09 bits (562), Expect = 9.792e-69
Identity = 126/314 (40.13%), Postives = 181/314 (57.64%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIF-NSRSGRLE--GFRGGFFPSNCDLKN-----QIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            ++F + +  +P  + + +TSR+ +  FALSGLD+LN    L + DK  II+WIY LQ+  N  +  L   GFRG        L         Y S H+ MTY+ L CL+ILGDDLSRVDK   L   + LQ   DG F A  +  E D+RF++ A   C +++D+S +D+   + +I    +YD G  Q P  ESHGGST+CAIASL ++ KL+    +    +  + RW I RQ  GF+GRP+K  D+CY+FW+GA+L++L   +  DF     +I ST +NL GGF K  +   S  D +H+Y  + G+S L
Sbjct:   24 RFFSRCLQVLPERYAALETSRLTVAFFALSGLDVLN---ALGQVDKERIIEWIYSLQVLPNENNSNLHCCGFRGSSQLGTTRLSQVTGEMHPYDSAHIAMTYTGLACLIILGDDLSRVDKRACLAGLRALQ-LLDGSFSAVPEGSENDMRFVYCASCICYMLDDWSGMDLQKTIDYIRNSLSYDSGLAQGPGLESHGGSTFCAIASLCLMEKLHSVLSDRQLRR--IQRWSILRQQSGFNGRPNKPVDTCYSFWVGATLQLLDIFRFTDFEKNRQYILSTQDNLVGGFAKWPD---SHPDALHSYFGVCGLSLL 328
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Sea Lamprey
Match: fntb (farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220])

HSP 1 Score: 102.064 bits (253), Expect = 2.707e-24
Identity = 93/361 (25.76%), Postives = 146/361 (40.44%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLS-RVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG-------------QLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNV 1130
            +Y KK ++++   +E  D SR  I  + L GL+LL                   D  + +S +  +  F       +           H+  TY+ +  L ILG + S  V     L+SF       +G FC      E DVR  + A +  ++         +    +++ CQN++GG G  P  E+HGG T+C +A+L IL K      E   +   +LRW++NRQ     GF GR +K  D CY+FW    L +L                 +    +L +++    +++AGG          F    HT  CL+G+S     CK      L     +   +N     LQP  P  N+
Sbjct:   13 QYLKKGLHHLSDAYECLDASRPWICYWILHGLELL-------------------DEPVPDSLASDVCAFLKLCQCPDGGFGGGPGQQAHLAPTYAAVNALCILGTEESYAVIDREKLQSFLYRIKQPNGDFCMHQG-GETDVRSAYCAASVASLTYIMEPKLFEGTADWVVSCQNWEGGIGGVPGMEAHGGYTFCGLAALVILRK------ERMLDLQRLLRWVVNRQMRFEGGFQGRTNKLVDGCYSFWQAGLLPLLHRSLMNEGDQALSEQRWMFHQEALQEYLLMCCQHVAGGLLDKPGKARDF---YHTCYCLSGLSVAQHFCK----DGLSKDTIVGKESN----ALQPTHPIYNI 336
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Sea Lamprey
Match: rabggtb (Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116])

HSP 1 Score: 62.7734 bits (151), Expect = 2.389e-12
Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 3 
Query:  675 YCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            YC +  L +  +L+        + +++  WL  RQ    G +GRP K  D CY++W+ ASL+M+G    ID   L  FI +  +   GGF    +      DP HT   +AG+S L
Sbjct:    2 YCCVGFLSVTGQLHHI------DADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLQMIGRLHWIDPDKLRRFILACQDEETGGF---ADRPGDMVDPFHTLFGIAGLSLL 108
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Yeast
Match: RAM1 (Beta subunit of the CAAX farnesyltransferase (FTase); this complex prenylates the a-factor mating pheromone and Ras proteins; required for the membrane localization of Ras proteins and a-factor; homolog of the mammalian FTase beta subunit [Source:SGD;Acc:S000002248])

HSP 1 Score: 117.472 bits (293), Expect = 1.448e-29
Identity = 94/343 (27.41%), Postives = 158/343 (46.06%), Query Frame = 3 
Query:   78 MNPDLISKYFKKFVNY-----IPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLS----RVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPR-EESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGAS---LKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHN 1058
            + P L  ++ K +++      +P    + D S+  +L +  + L +++R D LS+  K +I+D ++ +                                H+  TY+ +  L  L D++     R+D+ G+ +   +L+   +G F   L+  E D R I+ AL+   ++N  +    + V++++  CQNY+GGFG  P  +E+HGG T+CA ASL IL  ++        N   +L W   RQ +   GF GR +K  D CY+FW+G S   L+  GYGQ  +  +L D+I    +       + K   HS  D  HT  CL G++          N + HN
Sbjct:   74 IEPALTKEFHKMYLDVAFEISLPPQMTALDASQPWMLYWIANSLKVMDR-DWLSDDTKRKIVDKLFTISPSGGPF-----------------GGGPGQLSHLASTYAAINALS-LCDNIDGCWDRIDRKGIYQWLISLKEP-NGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQI------NVEKLLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHS--DFYHTNYCLLGLAVAESSYSCTPNDSPHN 388
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Yeast
Match: BET2 (Beta subunit of Type II geranylgeranyltransferase; required for vesicular transport between the endoplasmic reticulum and the Golgi; provides a membrane attachment moiety to Rab-like proteins Ypt1p and Sec4p; human homolog RABGGTB can complement yeast BET2 mutant [Source:SGD;Acc:S000006380])

HSP 1 Score: 104.375 bits (259), Expect = 1.296e-25
Identity = 64/201 (31.84%), Postives = 104/201 (51.74%), Query Frame = 3 
Query:  414 DLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            D+   D+   L SF      EDG F       E D RF+++AL++ +I+ + ++  VD  V F+L+C N+DGGFG  P  ESH    +  + +L I +KL++    + +    +  WL  RQ    G +GRP K  D CY++W+ +SL ++G    I++  L +FI    +   GG   + +   +  D  HT   +AG+S
Sbjct:  102 DVLGKDRKVRLISFIRGNQLEDGSFQGD-RFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCLGALAIANKLDML---SDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQDEKKGG---ISDRPENEVDVFHTVFGVAGLS 295
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Yeast
Match: CDC43 (Beta subunit of geranylgeranyltransferase type I; subunit of the Ram2p-Cdc43p heterodimer that catalyzes the geranylgeranylation of the cysteine residue in proteins containing a C-terminal CaaX sequence ending in Leu or Phe; has substrates important for morphogenesis [Source:SGD;Acc:S000003123])

HSP 1 Score: 64.3142 bits (155), Expect = 8.054e-12
Identity = 80/336 (23.81%), Postives = 146/336 (43.45%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLN-----RIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFF-----PSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDL---SRVDKTGVLESFKNLQNSEDGCFCAALD----CPEA----DVRFIFSALA-----SCAIINDFST-VDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKIL---SKLNVFFPENSNNKNIMLRWLINRQYE---------------------GFHGRPHKDDDSCYTFWIGASLKMLG--YGQLIDFPSLFDF-IESTYENLAGGFCK 944
            K+F++ +  +PS  + +D +R+ I+ +++SGL + +     +  D     +   I  + D    ++ +  + GF G         +  +L N ++           L+ +++L D     + +DK  +       Q  + G F + LD    C  +    D+RF + A+A      C    DF   +D + ++ +I+  Q Y+G FG     E H G T CA+++L +L    KL+  F E++      + WL++RQ                       GF GR +K  D+CY FW   SL +L   +  L     + ++ ++ T + L GGF K
Sbjct:   18 KFFERHLQLLPSSHQGHDVNRMAIIFYSISGLSIFDVNVSAKYGDHLGWMRKHYIKTVLD----DTENTVISGFVGSLVMNIPHATTINLPNTLFA----------LLSMIMLRDYEYFETILDKRSLARFVSKCQRPDRGSFVSCLDYKTNCGSSVDSDDLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYNGAFG--AHNEPHSGYTSCALSTLALLSSLEKLSDKFKEDT------ITWLLHRQVSSHGCMKFESELNASYDQSDDGGFQGRENKFADTCYAFWCLNSLHLLTKDWKMLCQTELVTNYLLDRTQKTLTGGFSK 331
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Nematostella
Match: EDO31665 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SXB0])

HSP 1 Score: 239.965 bits (611), Expect = 5.669e-76
Identity = 130/311 (41.80%), Postives = 195/311 (62.70%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSN---CDLKN----QIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            K+FK+ +  +PS + S DTSRV +  FA+S LD+L+ +D + E++K +II+WIY  Q+   +S    G R GF  S+   C+LK+      Y  GH+ MTY+ L  L+ILGDDLSR+++  ++E  ++LQ  EDG FC      E D+RFI+ A     I+ND+S ++++  V +I   Q+YD G  Q P  ESHGGST+CAIASL ++++L+  F ++   K  ++RW I RQ  GFHGRP+K  D+CY FW+GASL++L   ++IDF +  D++  T  N+ GGF K         D +H+Y  + G+S
Sbjct:   26 KFFKRCLAVLPSEYSSLDTSRVTVAFFAISALDVLDALDCI-EKEKKDIIEWIYSHQV-PPKSDGTNGGRCGFRGSSTAGCNLKDPESVHEYEYGHIAMTYTALAMLLILGDDLSRINRPAIIEGLRHLQ-LEDGSFCPTYLGSENDMRFIYCACCISFILNDWSGINIEKAVQYIRNSQSYDYGIAQGPHLESHGGSTFCAIASLSLMNQLDKVFTKSQLEK--LIRWCIFRQKSGFHGRPNKPVDTCYAFWVGASLEILNSFKMIDFTANRDYLMQTQANVTGGFSKWPGI---HPDALHSYFGVCGLS 328
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Nematostella
Match: EDO45865 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRP9])

HSP 1 Score: 102.834 bits (255), Expect = 3.498e-24
Identity = 95/362 (26.24%), Postives = 153/362 (42.27%), Query Frame = 3 
Query:  102 YFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSR--VDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKML-------------GYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVC 1133
            Y ++ +  +   +E  D SR  +  + L  L LL   +++  Q  ++I+ ++   Q          GF GG         NQ+    H+  TY+ +  L ILG + +   +D+  +       +N  DG F   +D  E D+R  + A  S +I N  +         ++  CQ Y+GGF   P  E+HGG T+C  A L +L K      E+  N   +LRW +NRQ +   GF GR +K  D CY++W+G    +L                 + D  +L D++    +  AGG          F    HT  CL+G+S        +       +R I    + L   L+P+ P  N+C
Sbjct:   61 YVRRGLVRLSDSYECLDASRPWLCYWMLHSLKLLG--EEVPLQQVSDIVGFLRRCQHPEG------GFGGG--------PNQV---PHLAPTYAAVCALSILGTEEAYNVIDRPALYNFIMRCRNL-DGGFRMHVD-GEVDIRGAYCAAVSASITNILTPELFAGTADWLKSCQTYEGGFSGEPGLEAHGGYTFCGFACLVLLGK------EHIVNLKQLLRWAVNRQMKAEGGFQGRTNKLVDGCYSYWLGGLFPLLHSVLEAKQDNAISQEKWMFDQVALQDYVLVQCQYHAGGLIDKPGKSRDF---YHTCYCLSGLS-----VAQHFMLGHRMNRNIVGGEHNL---LKPVHPVYNIC 384
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Medaka
Match: pggt1b (protein geranylgeranyltransferase type I subunit beta [Source:NCBI gene;Acc:101167874])

HSP 1 Score: 225.328 bits (573), Expect = 1.036e-69
Identity = 138/355 (38.87%), Postives = 204/355 (57.46%), Query Frame = 3 
Query:   69 KIEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIF----NSRSGRLEGFRGGF---FPSNCDLKNQI--YMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQ 1106
            +I+   D   ++F++ +  +P  + S +T+R+ I+ FALSGLD+L  +D +   DK+ II+WIY  Q+      S  GR  GFRG      P +      +  Y SGHV MTY+ L  L+ILGDDLSRV+K G L   + LQ  EDG F +  +  E D+RFI+ A   C +++D+S +++   + +I    +YD GFGQ    ESHGG TYCAIASL ++ +L         ++  + RW I RQ  GFHGRP+K  D+CY+FW+GA+L++LG  +  +F    +FI ST + L GGF K  +   S  DP+H Y  L G+ SLI +    +   +H +  I+  A Q ++ L 
Sbjct:   13 QIDFLKDRHVRFFQRTLQVLPERYASLETTRLSIVFFALSGLDVLGSLDVI---DKDLIIEWIYSQQVLPTDDKSNLGRC-GFRGSSHIGIPYSTKGPGVLHPYDSGHVAMTYTGLCSLLILGDDLSRVNKQGCLAGLRALQ-LEDGSFYSVPEGSENDIRFIYCAACICFMLDDWSGMNIQKAIEYIRGSLSYDSGFGQGAGRESHGGWTYCAIASLCLMGRLEEALSPRELDR--IRRWCIMRQQSGFHGRPNKPVDTCYSFWVGATLELLGVFRYTNFEKNRNFILSTQDRLVGGFAKWPD---SHPDPLHAYFGLCGL-SLIGE---PNLRKVHPALNITQGAFQHLQQLH 353
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Medaka
Match: rabggtb (Rab geranylgeranyltransferase subunit beta [Source:NCBI gene;Acc:101169143])

HSP 1 Score: 137.117 bits (344), Expect = 1.578e-36
Identity = 106/317 (33.44%), Postives = 153/317 (48.26%), Query Frame = 3 
Query:   72 IEMNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            ++ + D I+ Y  K  +Y  ++ E    S +    + L+ +DL+ ++D ++ Q   EIID+I   Q             GGF  S       I    H+  T S  V ++ L D L  +D   V+E  K LQ  EDG F A     E D RF F A+A+ A++     ++VD  V F+L C N+DGGFG RP  ESH G  YC    L +  +L+        N +++  WL  RQ    G +GRP K  D CY++W+ ASLK++G    ID   L  FI +  +   GGF    +      DP HT   +AG+S L
Sbjct:   21 LDKHADYIAAYGSKKDDYEYTLSEYLRMSGIY---WGLTVMDLMGQLDRMNLQ---EIIDFIKACQHDC----------GGFSAS-------IGHDPHLLYTLSA-VQILCLYDSLHAIDVDKVVEYVKGLQQ-EDGSF-AGDKWGEIDTRFSFCAVATLALLGKMEMINVDRAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLSLTGQLHQL------NADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDKSRLRQFILACQDEETGGF---ADRPGDMVDPFHTLFGVAGLSLL 302
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Medaka
Match: fntb (protein farnesyltransferase subunit beta [Source:NCBI gene;Acc:101160126])

HSP 1 Score: 107.457 bits (267), Expect = 3.245e-25
Identity = 99/367 (26.98%), Postives = 166/367 (45.23%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDD--LSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKML-------GYGQL------IDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRI 1145
            +Y KK + ++   +E  D SR  +  + L  L+LL   + +     +++  ++   Q   S +G   GF GG  P             H+  TY+ +  L I+G +   S +D+  +L+   +L+   DG F   +   E DVR  + A +  ++ N  +    +   ++ILRCQN++GG    P  E+HGG T+C  A+L IL        E+  +   +LRW+++RQ     GF GR +K  D CY+FW    L +L       G  +L       +  +L ++I    +N  GG   L   G S  D  HT  CL+G++      +   N + H    +    N+    L P  P  N+C +++
Sbjct:   65 QYLKKGLRHLSDAYECLDASRPWLCFWILHSLELLE--EPVPATVASDVCQFLARCQ---SPTG---GFAGG--PGQ---------YAHLAPTYAAVNALCIIGTEEAYSVIDREKLLDFLWSLKQP-DGSFMMHVG-GEVDVRSAYCAASVASLTNILTPKLFEDTTNWILRCQNWEGGLSGVPGLEAHGGYTFCGTAALVILGN------EHMLDLKALLRWVVSRQMRFEGGFQGRCNKLVDGCYSFWQAGVLPLLHRALFKEGESELSRNQWMFEQKALQEYILLCCQNPTGGL--LDKPGKS-RDFYHTCYCLSGLAV----AQHFGNLDHHQEIILGKEENR----LAPTHPVYNICPEKV 393
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Medaka
Match: fntb (protein farnesyltransferase subunit beta [Source:NCBI gene;Acc:101160126])

HSP 1 Score: 107.071 bits (266), Expect = 3.673e-25
Identity = 99/367 (26.98%), Postives = 167/367 (45.50%), Query Frame = 3 
Query:   99 KYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDD--LSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKML-------GYGQL------IDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRI 1145
            +Y KK + ++   +E  D SR  +  + L  L+LL   + +     +++  ++   Q   S +G   GF GG  P             H+  TY+ +  L I+G +   S +D+  +L+   +L+   DG F   +   E DVR  + A +  ++ N  +    +   ++ILRCQN++GG    P  E+HGG T+C  A+L IL        E+  +   +LRW+++RQ     GF GR +K  D CY+FW    L +L       G  +L       +  +L ++I    +N  GG   L   G S  D  HT  CL+G++       +    NL + + I +   +    L P  P  N+C +++
Sbjct:   62 QYLKKGLRHLSDAYECLDASRPWLCFWILHSLELLE--EPVPATVASDVCQFLARCQ---SPTG---GFAGG--PGQ---------YAHLAPTYAAVNALCIIGTEEAYSVIDREKLLDFLWSLKQP-DGSFMMHVG-GEVDVRSAYCAASVASLTNILTPKLFEDTTNWILRCQNWEGGLSGVPGLEAHGGYTFCGTAALVILGN------EHMLDLKALLRWVVSRQMRFEGGFQGRCNKLVDGCYSFWQAGVLPLLHRALFKEGESELSRNQWMFEQKALQEYILLCCQNPTGGL--LDKPGKS-RDFYHTCYCLSGLAV------AQHFGNLDHHQEIILGKEE--NRLAPTHPVYNICPEKV 390
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Planmine SMEST
Match: SMESG000057312.1 (SMESG000057312.1)

HSP 1 Score: 749.584 bits (1934), Expect = 0.000e+0
Identity = 364/366 (99.45%), Postives = 364/366 (99.45%), Query Frame = 3 
Query:   78 MNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRIENLSTENETS 1175
            MNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSN DLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYE LAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRIENLSTENETS
Sbjct:    1 MNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNRDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYEKLAGGFCKLKNTGHSFADPMHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLNVCKKRIENLSTENETS 366
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Planmine SMEST
Match: SMESG000035082.1 (SMESG000035082.1)

HSP 1 Score: 143.28 bits (360), Expect = 6.622e-39
Identity = 96/287 (33.45%), Postives = 146/287 (50.87%), Query Frame = 3 
Query:  171 LQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGV---LESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            + ++++ +DLLN +D      K+EII++I   Q  +          GGF P+       I    H+  T S +  L IL +++ R+DK  V   + S KN+  S +G         E D RF+F+A+A+ A++N    +D D +V ++L+C N+DGGFG +P  ESH G  +  + +L IL +L+        N+ +   WL  RQ    G +GRP K  D CY++W+ + L MLG    ID   L  FI  + +N  GG   + +      DP HT   LAGIS L
Sbjct:   46 IYWSITAMDLLNAVD---LYPKDEIIEFIVKCQQHD----------GGFSPA-------IDHDSHILSTLSAIQILSIL-NEIDRIDKDMVCKYILSLKNINGSFNGDKWG-----EVDTRFVFAAVATLALLNKLELIDADEIVEYVLKCYNFDGGFGTKPLSESHAGQVFVCLGTLSILHQLHRI------NQELTGWWLSERQLPSGGLNGRPEKKPDVCYSWWVLSCLSMLGKLSWIDGNRLVKFILCSQDNETGG---ISDRPGDMTDPFHTLFGLAGISLL 297
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Planmine SMEST
Match: SMESG000035082.1 (SMESG000035082.1)

HSP 1 Score: 130.183 bits (326), Expect = 3.042e-34
Identity = 92/287 (32.06%), Postives = 140/287 (48.78%), Query Frame = 3 
Query:  171 LQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDDLSRVDKTGV---LESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE--GFHGRPHKDDDSCYTFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGISSL 1016
            + ++++ +DLLN +D      K+EII++I   Q  +          GGF P+       I    H+  T S +  L IL +++ R+DK  V   + S KN+  S +G         E D RF+F+A+A+ A++N    +D D +V ++L+C N+DGGFG +P  ESH G  +  + +L IL +L+        N+ +   WL  RQ    G +GRP K  D CY++W+ + L MLG    ID                GG   + +      DP HT   LAGIS L
Sbjct:   46 IYWSITAMDLLNAVD---LYPKDEIIEFIVKCQQHD----------GGFSPA-------IDHDSHILSTLSAIQILSIL-NEIDRIDKDMVCKYILSLKNINGSFNGDKWG-----EVDTRFVFAAVATLALLNKLELIDADEIVEYVLKCYNFDGGFGTKPLSESHAGQVFVCLGTLSILHQLHRI------NQELTGWWLSERQLPSGGLNGRPEKKPDVCYSWWVLSCLSMLGKLSWID----------------GG---ISDRPGDMTDPFHTLFGLAGISLL 281
[Close]
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Planmine SMEST
Match: SMESG000064262.1 (SMESG000064262.1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.710e-22
Identity = 90/322 (27.95%), Postives = 151/322 (46.89%), Query Frame = 3 
Query:  126 IPSVFESYDTSRVIILQFALSGLDLLNRIDDLSEQDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMTYSCLVCLMILGDD--LSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRFIFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTYCAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYE---GFHGRPHKDDDSCYTFWIGASLKMLGYG---------QLIDFPSLFD-------------FIESTYENLAGGFCKLKNTGHSFADPMHTYLCLAGIS 1010
            +P+ +ES D S+  ++ + +  L LLN   ++ +  K  II    D++   +  G   GF GG F  +           H+  TY+ ++ L+ L  +  L  ++K  +L+ F +++  ++G F       E DVR  + A+A       +S         +I  CQ Y+GGFG  P  E+HGG ++CA+A+L +L+ ++        + + +LRW +NRQ     GF GR +K  DSCY++W+GA   ++             + D P LFD              ++  Y N  GG   L +     +DP HT   L+G+S
Sbjct:   67 LPNTYESLDASQSWLIFWNVHTLKLLNF--NIPDNLKCGIIK---DIKSCQNNEG---GFGGGPFQLS-----------HMATTYASVMSLVELQSEEALGVINKETLLKWFLDIK-LDNGAFTMH-SGGEVDVRGCYCAVAVAKATGIYSNELFKNTAKWIASCQTYEGGFGGAPGLEAHGGYSFCALAALILLNGVHCI------DLDRLLRWAVNRQMSSEGGFQGRTNKLVDSCYSYWVGALFPLIQQSLNGNSSIDEMIFDRP-LFDVNALEEYVVACCQMLDQPYHNPNGG--GLIDKPGKKSDPYHTCYGLSGLS 358
The following BLAST results are available for this feature:
BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PGGT1B4.906e-7440.74protein geranylgeranyltransferase type I subunit b... [more]
RABGGTB2.517e-3530.82Rab geranylgeranyltransferase subunit beta [Source... [more]
PGGT1B1.519e-3338.74protein geranylgeranyltransferase type I subunit b... [more]
FNTB2.221e-2029.47farnesyltransferase, CAAX box, beta [Source:HGNC S... [more]
CHURC1-FNTB3.749e-2029.47CHURC1-FNTB readthrough [Source:HGNC Symbol;Acc:HG... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Y48E1B.31.441e-6638.46pep chromosome:WBcel235:II:13547751:13567999:-1 ge... [more]
Y48E1B.31.441e-6638.46pep chromosome:WBcel235:II:13547739:13567971:-1 ge... [more]
Y48E1B.38.155e-3839.39pep chromosome:WBcel235:II:13547751:13553464:-1 ge... [more]
ggtb-12.957e-3729.91Probable geranylgeranyl transferase type-2 subunit... [more]
ggtb-11.651e-3428.71Probable geranylgeranyl transferase type-2 subunit... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4
Match NameE-valueIdentityDescription
betaggt-I9.398e-6636.52gene:FBgn0015000 transcript:FBtr0330714[more]
betaggt-I1.307e-6536.59gene:FBgn0015000 transcript:FBtr0078991[more]
betaggt-II1.122e-2529.11gene:FBgn0028970 transcript:FBtr0077631[more]
CG175659.553e-2225.54gene:FBgn0038424 transcript:FBtr0083286[more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pggt1b1.683e-6340.75protein geranylgeranyltransferase type I, beta sub... [more]
rabggtb2.229e-3630.84Rab geranylgeranyltransferase subunit beta [Source... [more]
rabggtb1.325e-2936.75Rab geranylgeranyltransferase subunit beta [Source... [more]
fntb7.449e-2525.14farnesyltransferase, CAAX box, beta [Source:ZFIN;A... [more]
fntb1.309e-2225.21farnesyltransferase, CAAX box, beta [Source:ZFIN;A... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pggt1b1.384e-6940.25protein geranylgeranyltransferase type I, beta sub... [more]
pggt1b1.907e-6040.96protein geranylgeranyltransferase type I, beta sub... [more]
sgo14.909e-3433.09shugoshin 1 [Source:Xenbase;Acc:XB-GENE-940795][more]
sgo15.129e-3433.09shugoshin 1 [Source:Xenbase;Acc:XB-GENE-940795][more]
sgo18.794e-3431.23shugoshin 1 [Source:Xenbase;Acc:XB-GENE-940795][more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pggt1b2.718e-7441.05protein geranylgeranyltransferase type I, beta sub... [more]
Pggt1b8.236e-3439.27protein geranylgeranyltransferase type I, beta sub... [more]
Rabggtb3.977e-3329.87Rab geranylgeranyl transferase, b subunit [Source:... [more]
Rabggtb6.456e-3329.87Rab geranylgeranyl transferase, b subunit [Source:... [more]
Fntb9.118e-2229.82farnesyltransferase, CAAX box, beta [Source:MGI Sy... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P53610|PGTB1_RAT6.573e-7441.05Geranylgeranyl transferase type-1 subunit beta OS=... [more]
sp|Q8BUY9|PGTB1_MOUSE1.901e-7341.05Geranylgeranyl transferase type-1 subunit beta OS=... [more]
sp|P53609|PGTB1_HUMAN2.356e-7340.74Geranylgeranyl transferase type-1 subunit beta OS=... [more]
sp|Q5EAD5|PGTB1_BOVIN1.046e-7240.74Geranylgeranyl transferase type-1 subunit beta OS=... [more]
sp|Q55DA3|PGTB1_DICDI8.075e-6337.73Geranylgeranyl transferase type-1 subunit beta OS=... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267GLT56.983e-9148.38Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
A0A267F9I51.111e-9048.38Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
A0A067RGQ21.340e-8141.72Geranylgeranyl transferase type-1 subunit beta OS=... [more]
A0A1I8IPY69.852e-8151.54Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1B6I2N91.596e-8042.51Uncharacterized protein OS=Homalodisca liturata OX... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
pggt1b1.948e-7242.68protein geranylgeranyltransferase type I, beta sub... [more]
rabggtb5.444e-3630.53Rab geranylgeranyltransferase subunit beta [Source... [more]
fntb9.170e-2726.70protein farnesyltransferase subunit beta [Source:N... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
pggt1b9.792e-6940.13protein geranylgeranyltransferase type I, beta sub... [more]
fntb2.707e-2425.76farnesyltransferase, CAAX box, beta [Source:ZFIN;A... [more]
rabggtb2.389e-1232.76Rab geranylgeranyltransferase subunit beta [Source... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
RAM11.448e-2927.41Beta subunit of the CAAX farnesyltransferase (FTas... [more]
BET21.296e-2531.84Beta subunit of Type II geranylgeranyltransferase;... [more]
CDC438.054e-1223.81Beta subunit of geranylgeranyltransferase type I; ... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO316655.669e-7641.80Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO458653.498e-2426.24Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
pggt1b1.036e-6938.87protein geranylgeranyltransferase type I subunit b... [more]
rabggtb1.578e-3633.44Rab geranylgeranyltransferase subunit beta [Source... [more]
fntb3.245e-2526.98protein farnesyltransferase subunit beta [Source:N... [more]
fntb3.673e-2526.98protein farnesyltransferase subunit beta [Source:N... [more]
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BLAST of Geranylgeranyl transferase type-1 subunit beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000057312.10.000e+099.45SMESG000057312.1[more]
SMESG000035082.16.622e-3933.45SMESG000035082.1[more]
SMESG000035082.13.042e-3432.06SMESG000035082.1[more]
SMESG000064262.11.710e-2227.95SMESG000064262.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30008852 ID=SMED30008852|Name=Geranylgeranyl transferase type-1 subunit beta|organism=Schmidtea mediterranea sexual|type=transcript|length=1253bp
GAAAAGGTTTTCATTAATTTAAAATCCGCTCAAATTCTAAAGTTTTCAAG
TTAAAGATCAGTTAACAAAAAATTGAAATGAATCCAGATTTAATTTCAAA
ATACTTTAAAAAGTTTGTAAATTATATTCCAAGTGTTTTTGAATCATACG
ATACATCAAGAGTTATAATTTTGCAATTTGCACTATCTGGTCTCGATTTG
TTAAATCGTATTGATGATCTATCGGAACAAGACAAGAATGAAATAATTGA
CTGGATTTACGATCTTCAAATTTTTAATTCTCGATCTGGTCGATTAGAGG
GGTTTCGAGGAGGATTTTTCCCCAGTAATTGTGATCTTAAAAACCAGATT
TACATGTCTGGTCATGTAACGATGACATATTCGTGTTTAGTTTGTTTGAT
GATTTTGGGTGATGATCTTAGTCGAGTTGATAAAACTGGTGTCTTAGAAA
GTTTTAAAAATTTGCAAAATTCTGAGGATGGCTGCTTTTGTGCGGCTCTT
GACTGCCCAGAAGCAGACGTGAGATTTATATTTTCTGCCTTAGCTTCATG
TGCAATTATAAACGATTTCAGCACAGTTGATGTTGATGCTGTTGTATCGT
TTATTTTGAGATGTCAAAATTATGATGGTGGCTTTGGTCAGAGACCTCGT
GAAGAAAGTCACGGAGGCTCCACATATTGTGCAATAGCAAGCTTAAAAAT
TCTATCAAAATTGAATGTTTTCTTTCCTGAAAATTCCAATAACAAAAATA
TAATGCTTCGATGGTTAATAAATCGTCAGTATGAAGGATTTCATGGAAGA
CCACACAAAGACGACGATAGTTGCTATACATTTTGGATTGGAGCCTCTTT
GAAAATGTTGGGATATGGTCAGTTGATAGATTTTCCTTCTTTGTTCGATT
TCATTGAATCTACTTATGAAAATCTGGCTGGGGGATTTTGTAAATTGAAG
AACACAGGGCATTCTTTTGCTGATCCGATGCACACGTATTTGTGTTTGGC
TGGAATTTCTTCACTTATTGACGATTGCAAATCCAATTCAAATTCAAATT
TACACAATTCAAGAACAATTTCAATGGCAGCCAATCAATTAATTGAAATC
CTTCAACCCTTGGAACCGTCTTTGAATGTTTGTAAGAAACGAATTGAGAA
TCTATCAACTGAAAATGAAACTTCATTGAGTATTCTTAGATTGTGAATCT
AATTTTTGAATCTGTTGAAAATAATATATTATTATTTTGATTTTAAAAAA
AAA
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protein sequence of SMED30008852-orf-1

>SMED30008852-orf-1 ID=SMED30008852-orf-1|Name=SMED30008852-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=373bp
MNPDLISKYFKKFVNYIPSVFESYDTSRVIILQFALSGLDLLNRIDDLSE
QDKNEIIDWIYDLQIFNSRSGRLEGFRGGFFPSNCDLKNQIYMSGHVTMT
YSCLVCLMILGDDLSRVDKTGVLESFKNLQNSEDGCFCAALDCPEADVRF
IFSALASCAIINDFSTVDVDAVVSFILRCQNYDGGFGQRPREESHGGSTY
CAIASLKILSKLNVFFPENSNNKNIMLRWLINRQYEGFHGRPHKDDDSCY
TFWIGASLKMLGYGQLIDFPSLFDFIESTYENLAGGFCKLKNTGHSFADP
MHTYLCLAGISSLIDDCKSNSNSNLHNSRTISMAANQLIEILQPLEPSLN
VCKKRIENLSTENETSLSILRL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0004661protein geranylgeranyltransferase activity
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: cellular component
TermDefinition
GO:0005953CAAX-protein geranylgeranyltransferase complex
Vocabulary: biological process
TermDefinition
GO:0018344protein geranylgeranylation
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase
IPR001330PFTB_repeat
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.50.10.20coord: 1..369
e-value: 4.3E-96
score: 323.9
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 8..339
NoneNo IPR availablePANTHERPTHR11774:SF4GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETAcoord: 8..339
IPR001330PFTB repeatPFAMPF00432Prenyltranscoord: 228..262
e-value: 2.3E-4
score: 20.8
coord: 130..161
e-value: 2.9
score: 7.7
coord: 168..209
e-value: 4.9E-14
score: 51.8
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILYSSF48239Terpenoid cyclases/Protein prenyltransferasescoord: 7..358