40S ribosomal protein S10
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30008769 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 17
Homology
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10-NUDT3 (RPS10-NUDT3 readthrough [Source:HGNC Symbol;Acc:HGNC:49181]) HSP 1 Score: 124.79 bits (312), Expect = 2.053e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383]) HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383]) HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383]) HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383]) HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Celegans
Match: rps-10 (Ribosomal Protein, Small subunit [Source:UniProtKB/TrEMBL;Acc:O01869]) HSP 1 Score: 117.857 bits (294), Expect = 9.976e-34 Identity = 68/147 (46.26%), Postives = 83/147 (56.46%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRG 550 M IP IYE LF GV AKKD T V NL VIK L+SL S+ V+EQFAWR YYW+L + GI YLREYL LPAEIVPAT+K ++P P +PR A + A +E V + PG + ++ G GRG Sbjct: 1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELVKEQFAWRHYYWYLTDAGILYLREYLALPAEIVPATIK-TKPREIRVPHEDRAPRAA--QGEKGDREAYRTEKVTEAGPGGAPVYRAGFGRG 144
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0074732) HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38 Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556 M +P R IYE LF+ GV+ AKKD + + NL+VIKA+QSL S+ V+EQFAWR YYW+L NEGI LR YLHLP EIVP+T+K A RP VGG PR P A +TG + + APG S V+F+GG GRG+R Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0344339) HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38 Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556 M +P R IYE LF+ GV+ AKKD + + NL+VIKA+QSL S+ V+EQFAWR YYW+L NEGI LR YLHLP EIVP+T+K A RP VGG PR P A +TG + + APG S V+F+GG GRG+R Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0074731) HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38 Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556 M +P R IYE LF+ GV+ AKKD + + NL+VIKA+QSL S+ V+EQFAWR YYW+L NEGI LR YLHLP EIVP+T+K A RP VGG PR P A +TG + + APG S V+F+GG GRG+R Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0308192) HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38 Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556 M +P R IYE LF+ GV+ AKKD + + NL+VIKA+QSL S+ V+EQFAWR YYW+L NEGI LR YLHLP EIVP+T+K A RP VGG PR P A +TG + + APG S V+F+GG GRG+R Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10a (gene:FBgn0027494 transcript:FBtr0085194) HSP 1 Score: 110.538 bits (275), Expect = 1.545e-30 Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV-KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGGSPRPAPTGAYRT----GNTANMSEAVMKDAPGD------SVQFKGGMGRGNR 556 M IP R IYE LF+ GV+ AKKD P H E+ K+ NL VIK +QSL S+ +V+EQFAWR +YW L NEGI LR YLHLP EIVP+T+ + +R +A G P GA +T N A D GD V+++GG GR +R Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKD-SPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGAYGMDKKGDVGAGTGRVEYRGGFGRASR 160
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]) HSP 1 Score: 117.857 bits (294), Expect = 2.782e-33 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ ARP G RPA Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGLEGERPA 116
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]) HSP 1 Score: 117.857 bits (294), Expect = 2.782e-33 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ ARP G RPA Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGLEGERPA 116
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]) HSP 1 Score: 68.9366 bits (167), Expect = 1.771e-15 Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYY 307 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +Y Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAK-HPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFY 68
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:549472]) HSP 1 Score: 124.79 bits (312), Expect = 7.222e-36 Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKDRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:549472]) HSP 1 Score: 124.02 bits (310), Expect = 1.705e-35 Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKDRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Match: ENSXETT00000037604.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV462160.1:431:1455:1 gene:ENSXETG00000014685.1 transcript:ENSXETT00000037604.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 117.472 bits (293), Expect = 5.410e-33 Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV-KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK 388 ML+P D IYE +F GVM AK D RP + H EV V NL V KA+ SLKS+ FVRE F WR YW+L NEGI YLR+YLHLP EIVPA+++ Sbjct: 1 MLMPLDQLRAIYEVIFRDGVMVAKNDQRPQSRHAEVPAVTNLQVTKAMGSLKSRGFVRETFVWRHCYWYLTNEGIAYLRQYLHLPPEIVPASLQ 94
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347]) HSP 1 Score: 124.79 bits (312), Expect = 1.081e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347]) HSP 1 Score: 126.716 bits (317), Expect = 1.229e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347]) HSP 1 Score: 126.716 bits (317), Expect = 1.229e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347]) HSP 1 Score: 126.716 bits (317), Expect = 1.229e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347]) HSP 1 Score: 126.331 bits (316), Expect = 1.569e-36 Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTG 454 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP P G Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRPKGPEG 111
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|Q962R9|RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda OX=7108 GN=RpS10 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.237e-38 Identity = 78/162 (48.15%), Postives = 94/162 (58.02%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKAS------------RPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKD-APGDS-VQFKGGMGRGN 553 ML+P R IYE LF+ GVM AKKD K+ NL VIKA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR +LHLP EIVPAT+K S RPDAPAR S AYR T + D PG + ++F+GG GRG Sbjct: 1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRAETVRRGAVGRPDAPARSAEDRS-------AYRRAPTTPAAHDKKADVGPGSADLEFRGGFGRGR 155
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|O77302|RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus OX=35632 GN=RPS10 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.444e-37 Identity = 76/155 (49.03%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK-ASRPDAPARPT-VGGSPRPAPTGAYRTGNTANMSEAVMKDAPG----DSVQFKGGMGRGNR 556 ML+ R IYE LF+ GV+ AKKD H E+ V NL+VI+A+QSL S+ +V+EQF WR YYW+L NEGI YLR++LHLP EIVPAT+K +RP+A ARP G+PR A G R G + K G + QF+GG GRG + Sbjct: 1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPK-HGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRPEA-ARPRPKEGAPR-AQVGEDRAGYRRGFGGSDKKGEAGAGADTNFQFRGGFGRGRQ 152
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|Q9VWG3|RS10B_DROME (40S ribosomal protein S10b OS=Drosophila melanogaster OX=7227 GN=RpS10b PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 8.431e-37 Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556 M +P R IYE LF+ GV+ AKKD + + NL+VIKA+QSL S+ V+EQFAWR YYW+L NEGI LR YLHLP EIVP+T+K A RP VGG PR P A +TG + + APG S V+F+GG GRG+R Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|P63326|RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.594e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|P63325|RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.594e-36 Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+ G PRP Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A182YEX1 (S10_plectin domain-containing protein OS=Anopheles stephensi OX=30069 PE=4 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.907e-41 Identity = 76/159 (47.80%), Postives = 95/159 (59.75%), Query Frame = 2 Query: 104 LKMLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTGAYRTGNTANMSEAVMKDAPGD------SVQFKGGMGRGNRM 559 L+M +P R IYE LF+ GV+ A+KD + + NL+VIK +QSLKSKNFV+EQFAWR YYW+L NEGI YLR YLHLPAEIVP+T+K + P R PRP P M +A D GD ++++GG GRGNRM Sbjct: 1 LQMFMPKAHRVAIYEYLFKEGVLVAQKDFYAPKHPELENIPNLHVIKTMQSLKSKNFVKEQFAWRHYYWYLTNEGIEYLRAYLHLPAEIVPSTLKRAARSEPQRARTQAGPRPEGPKSGEDRQAYRRMQQAAPADKKGDVGVGAGELEYRGGFGRGNRM 159
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A504YVP2 (Ribosomal protein S10 OS=Fasciola gigantica OX=46835 GN=FGIG_06337 PE=4 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.747e-40 Identity = 80/170 (47.06%), Postives = 101/170 (59.41%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPD-----------APARPTVGG--------SPRPAPTGA-YRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 559 ML+P D+RN IYE + + GV+ A+ D+RP H + V+NL+VIK ++SLKSK VREQ+AWR+YYWFLNN+GITYLRE LHLP++I+PATMKA D A PT G +P AP GA + G T E V F+GG GRG M Sbjct: 1 MLLPVDVRNSIYEKIIQDGVLCARNDIRPCYNHPTINVRNLFVIKTMRSLKSKGCVREQYAWRTYYWFLNNDGITYLREVLHLPSDIIPATMKAPARDPRLAGMGMEHAAHRGPTDGRVAFRRGPVAPTGAPFGAPEKEGATVGEGE----------VHFRGGYGRGRPM 160
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A2H1CQZ0 (Plectin/S10 domain protein OS=Fasciola hepatica OX=6192 GN=D915_001745 PE=4 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.079e-40 Identity = 80/170 (47.06%), Postives = 101/170 (59.41%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPD-----------APARPTVGG--------SPRPAPTGA-YRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 559 ML+P D+RN IYE + + GV+ A+ D+RP H + V+NL+VIK ++SLKSK VREQ+AWR+YYWFLNN+GITYLRE LHLP++I+PATMKA D A PT G +P AP GA + G T E V F+GG GRG M Sbjct: 1 MLLPIDVRNSIYEKIIQDGVLCARNDIRPCYNHPTINVRNLFVIKTMRSLKSKGCVREQYAWRTYYWFLNNDGITYLREVLHLPSDIIPATMKAPARDPRLAGMGMEHAAHRGPTDGRVAFRRGPVAPTGAPFGAPEKEGATVGEGE----------VHFRGGYGRGRPM 160
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A182T8Q5 (S10_plectin domain-containing protein OS=Anopheles maculatus OX=74869 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.659e-40 Identity = 75/157 (47.77%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTGAYRTGNTANMSEAVMKDAPGD------SVQFKGGMGRGNRM 559 M +P R IYE LF+ GV+ A+KD + + NL+VIK +QSLKSKNFV+EQFAWR YYW+L NEGI YLR YLHLPAEIVP+T+K + P R PRP P M +A D GD ++++GG GRGNRM Sbjct: 1 MFMPKAHRVAIYEYLFKEGVLVAQKDFYAPKHPELENIPNLHVIKTMQSLKSKNFVKEQFAWRHYYWYLTNEGIEYLRAYLHLPAEIVPSTLKRAARSEPQRARTQAGPRPEGPKAGEDRQAYRRMQQAAPADKKGDVGVGAGELEYRGGFGRGNRM 157
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A182RL72 (40S ribosomal protein S10 OS=Anopheles funestus OX=62324 PE=4 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 3.933e-40 Identity = 75/157 (47.77%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTGAYRTGNTANMSEAVMKDAPGD------SVQFKGGMGRGNRM 559 M +P R IYE LF+ GV+ A+KD + + NL+VIK +QSLKSKNFV+EQFAWR YYW+L NEGI YLR YLHLPAEIVP+T+K + P R PRP P M +A D GD ++++GG GRGNRM Sbjct: 1 MFMPKAHRVAIYEYLFKEGVLVAQKDFYAPKHPELENIPNLHVIKTMQSLKSKNFVKEQFAWRHYYWYLTNEGIEYLRAYLHLPAEIVPSTLKRAARSEPQRARTQAGPRPEGPKSGEDRQAYRRMQQAAPADKKGDVGVGTGELEYRGGFGRGNRM 157
BLAST of 40S ribosomal protein S10 vs. Ensembl Cavefish
Match: ENSAMXT00000049382.1 (pep primary_assembly:Astyanax_mexicanus-2.0:10:24652399:24660217:-1 gene:ENSAMXG00000037914.1 transcript:ENSAMXT00000049382.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 119.398 bits (298), Expect = 6.664e-34 Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDA 406 M++P + IYE LF GVM AKKD RP T H E++ V NL VI+A+ SLKS+ FVRE F WR +YW+L NEGI YLR+YLHLP EIVP ++ R A Sbjct: 1 MVMPLNHLRAIYERLFRDGVMVAKKDKRPQTKHPEIQGVGNLQVIRAMGSLKSRGFVRETFTWRHFYWYLTNEGIVYLRDYLHLPPEIVPTPLQRVRKPA 100
BLAST of 40S ribosomal protein S10 vs. Ensembl Cavefish
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:103038289]) HSP 1 Score: 117.857 bits (294), Expect = 2.832e-33 Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG 430 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ ARP G Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKG 109
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011293.1 (pep scaffold:Pmarinus_7.0:GL478123:50461:51018:-1 gene:ENSPMAG00000010266.1 transcript:ENSPMAT00000011293.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 134.806 bits (338), Expect = 2.040e-40 Identity = 69/124 (55.65%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQE-VKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTA 478 ML+P D IYE LF GVM AKKD RP+++HQE V V NL V +A+ SLKS+ FVRE F WR +YW+L+NEGI YLR+YLHLP EIVP T+ R PA G P+ P GA R TA Sbjct: 1 MLMPLDKLRSIYEALFRDGVMVAKKDRRPDSIHQELVGVTNLQVSRAMASLKSRGFVRETFTWRHHYWYLSNEGIGYLRDYLHLPPEIVPVTLHRVRQPLPA-SLPGRRPQTGPLGAGRGRGTA 123
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]) HSP 1 Score: 124.405 bits (311), Expect = 1.580e-36 Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVR--PNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKAS-RPD-APARPTVGGSPRPAPTG 454 ML+P R IYE LF+ GVM AKKDV + E V NL+V+KA+QSLKS+ FV+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT++ RP+ A RP G RPA G Sbjct: 1 MLMPKKDRVAIYELLFKEGVMVAKKDVHLAKHPELAEKNVPNLHVMKAMQSLKSRGFVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQIRPETARPRPKGLGEDRPARLG 119
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003346.1 (pep scaffold:Pmarinus_7.0:GL476750:206073:206612:-1 gene:ENSPMAG00000003064.1 transcript:ENSPMAT00000003346.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 112.464 bits (280), Expect = 5.228e-32 Identity = 64/153 (41.83%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPA-RPTVGGSPRPAPTG-----AYRTGNTANMSEAVMKDAPGDSV-QFKGGMG 544 ML+PT+ IYE LF GVM A++D RP + H EV+ L + +A++SL+S+ FVRE AW+ +YW+L +EGI +LR YL LP EIVPA+M+ R P+ R G P A AYR + + A G V +F+GG G Sbjct: 1 MLLPTEQLRAIYELLFRDGVMVARRDHRPQSRHAEVRFATQLQIFRAMRSLRSRGFVRETAAWQHHYWYLTDEGIGFLRGYLRLPTEIVPASMQRFRQPTPSVRRLQGRGPGVARGASPDRQAYRRAVAKDEDKVASVGAAGLPVFEFRGGKG 153
BLAST of 40S ribosomal protein S10 vs. Ensembl Yeast
Match: RPS10A (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10A has a paralog, RPS10B, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia [Source:SGD;Acc:S000005819]) HSP 1 Score: 110.153 bits (274), Expect = 4.769e-32 Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASR 397 ML+P + RNKI++ LF+ GV+ AKKD H+E+ KNLYVIKALQSL SK +V+ QF+W+ YY+ L EG+ YLREYL+LP IVP T R Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFN-QAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQER 95
BLAST of 40S ribosomal protein S10 vs. Ensembl Yeast
Match: RPS10B (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia [Source:SGD;Acc:S000004843]) HSP 1 Score: 109.383 bits (272), Expect = 1.051e-31 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASR 397 ML+P RNKI++ LF+ GV+ AKKD H+E+ KNLYVIKALQSL SK +V+ QF+W+ YY+ L EG+ YLREYL+LP IVP T R Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFN-QAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQER 95
BLAST of 40S ribosomal protein S10 vs. Ensembl Nematostella
Match: EDO47718 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLM9]) HSP 1 Score: 119.783 bits (299), Expect = 1.722e-34 Identity = 70/148 (47.30%), Postives = 83/148 (56.08%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP-ARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRG 550 MLIP R IYE LF+ GV AKKD Q V NL+VIKALQSLKS+ +V E+F W+ YYW L NEGITYLR++LHLP EIVPAT++ A ARP G G G + + P V+ KGG G G Sbjct: 1 MLIPKKNRVIIYEYLFKEGVCVAKKDFNSPKHTQIENVPNLHVIKALQSLKSRGYVEEKFCWKHYYWNLTNEGITYLRDFLHLPTEIVPATLRRQVTRAETARPRPKGM-----DGPRGPGEGGDRDRESYRRGPPPGVEGKGGAGSG 143
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:101158101]) HSP 1 Score: 118.242 bits (295), Expect = 1.489e-33 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ ARP G RPA Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGMEGERPA 116
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:101158101]) HSP 1 Score: 119.013 bits (297), Expect = 2.719e-33 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ ARP G RPA Sbjct: 37 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGMEGERPA 152
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:101158101]) HSP 1 Score: 117.857 bits (294), Expect = 4.196e-33 Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPD-APARPTVGGSPRPA 445 ML+P R IYE LF+ GVM AKKDV H E+ V NL+V+KA+QSLKS +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ A RP RPA Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHL-AKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPETARPRPKGMEGERPA 116
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: plecb (plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]) HSP 1 Score: 120.168 bits (300), Expect = 3.740e-31 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP 409 ML+P IYE LF GVM AKKD RP +H EV+ V+NL VI+ + SLKS+ +V+E FAWR +YW+L N+GI YLR++LHLPAEIVPA+++ R AP Sbjct: 5 MLMPLRDLRAIYEVLFRDGVMVAKKDKRPQIMHPEVQDVRNLQVIRVMASLKSRGYVKETFAWRHFYWYLTNDGIVYLRDFLHLPAEIVPASLQRIRKPAP 105
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: plecb (plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]) HSP 1 Score: 120.168 bits (300), Expect = 3.925e-31 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP 409 ML+P IYE LF GVM AKKD RP +H EV+ V+NL VI+ + SLKS+ +V+E FAWR +YW+L N+GI YLR++LHLPAEIVPA+++ R AP Sbjct: 5 MLMPLRDLRAIYEVLFRDGVMVAKKDKRPQIMHPEVQDVRNLQVIRVMASLKSRGYVKETFAWRHFYWYLTNDGIVYLRDFLHLPAEIVPASLQRIRKPAP 105
BLAST of 40S ribosomal protein S10 vs. Planmine SMEST
Match: SMESG000034720.1 (SMESG000034720.1) HSP 1 Score: 313.153 bits (801), Expect = 1.129e-110 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 2 Query: 110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 559 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM Sbjct: 1 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 150 The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of 40S ribosomal protein S10 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of 40S ribosomal protein S10 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of 40S ribosomal protein S10 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of 40S ribosomal protein S10 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of 40S ribosomal protein S10 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008769 ID=SMED30008769|Name=40S ribosomal protein S10|organism=Schmidtea mediterranea sexual|type=transcript|length=609bpback to top protein sequence of SMED30008769-orf-1 >SMED30008769-orf-1 ID=SMED30008769-orf-1|Name=SMED30008769-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=151bp MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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