40S ribosomal protein S10

Overview
Name40S ribosomal protein S10
Smed IDSMED30008769
Length (bp)609
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 40S ribosomal protein S10 (SMED30008769) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S10 (SMED30008769) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S10 (SMED30008769) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S10 (SMED30008769) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30008769

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 17

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30008769h1SMcG0020171 dd_Smed_v4_117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30008769h1SMcG0020171 dd_Smed_v4_1117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30008769h1SMcG0020171 dd_Smed_v4_1117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30008769h1SMcG0020171 dd_Smed_v4_1117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30008769h1SMcG0020171 dd_Smed_v4_1117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult fluorescence in situ hybridization evidence
non-ciliated neuronSMED30008769h1SMcG0020171 dd_Smed_v4_1117_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cement glandSMED30008769h1SMcG0020171 BK007027smed_ncbi_20240424PMID:20967238
Collins JJ et al., 2010		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
gamma neoblastSMED30008769h1SMcG0020171 dd_Smed_v6_117_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30008769h1SMcG0020171 dd_Smed_v6_117_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10-NUDT3 (RPS10-NUDT3 readthrough [Source:HGNC Symbol;Acc:HGNC:49181])

HSP 1 Score: 124.79 bits (312), Expect = 2.053e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383])

HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383])

HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383])

HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Match: RPS10 (ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC:10383])

HSP 1 Score: 126.331 bits (316), Expect = 2.174e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Celegans
Match: rps-10 (Ribosomal Protein, Small subunit [Source:UniProtKB/TrEMBL;Acc:O01869])

HSP 1 Score: 117.857 bits (294), Expect = 9.976e-34
Identity = 68/147 (46.26%), Postives = 83/147 (56.46%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRG 550
            M IP      IYE LF  GV  AKKD    T      V NL VIK L+SL S+  V+EQFAWR YYW+L + GI YLREYL LPAEIVPAT+K ++P     P    +PR A     +    A  +E V +  PG +  ++ G GRG
Sbjct:    1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELVKEQFAWRHYYWYLTDAGILYLREYLALPAEIVPATIK-TKPREIRVPHEDRAPRAA--QGEKGDREAYRTEKVTEAGPGGAPVYRAGFGRG 144
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0074732)

HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38
Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556
            M +P   R  IYE LF+ GV+ AKKD       +   + NL+VIKA+QSL S+  V+EQFAWR YYW+L NEGI  LR YLHLP EIVP+T+K  A       RP VGG PR  P  A +TG       +  + APG S              V+F+GG GRG+R
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0344339)

HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38
Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556
            M +P   R  IYE LF+ GV+ AKKD       +   + NL+VIKA+QSL S+  V+EQFAWR YYW+L NEGI  LR YLHLP EIVP+T+K  A       RP VGG PR  P  A +TG       +  + APG S              V+F+GG GRG+R
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0074731)

HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38
Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556
            M +P   R  IYE LF+ GV+ AKKD       +   + NL+VIKA+QSL S+  V+EQFAWR YYW+L NEGI  LR YLHLP EIVP+T+K  A       RP VGG PR  P  A +TG       +  + APG S              V+F+GG GRG+R
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10b (gene:FBgn0285947 transcript:FBtr0308192)

HSP 1 Score: 129.028 bits (323), Expect = 8.411e-38
Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556
            M +P   R  IYE LF+ GV+ AKKD       +   + NL+VIKA+QSL S+  V+EQFAWR YYW+L NEGI  LR YLHLP EIVP+T+K  A       RP VGG PR  P  A +TG       +  + APG S              V+F+GG GRG+R
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Match: RpS10a (gene:FBgn0027494 transcript:FBtr0085194)

HSP 1 Score: 110.538 bits (275), Expect = 1.545e-30
Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV-KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGGSPRPAPTGAYRT----GNTANMSEAVMKDAPGD------SVQFKGGMGRGNR 556
            M IP   R  IYE LF+ GV+ AKKD  P   H E+ K+ NL VIK +QSL S+ +V+EQFAWR +YW L NEGI  LR YLHLP EIVP+T+ + +R +A       G P     GA +T     N      A   D  GD       V+++GG GR +R
Sbjct:    1 MFIPKANRVAIYEYLFKEGVLVAKKD-SPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGAYGMDKKGDVGAGTGRVEYRGGFGRASR 160
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481])

HSP 1 Score: 117.857 bits (294), Expect = 2.782e-33
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+  ARP   G    RPA
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGLEGERPA 116
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481])

HSP 1 Score: 117.857 bits (294), Expect = 2.782e-33
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+  ARP   G    RPA
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGLEGERPA 116
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481])

HSP 1 Score: 68.9366 bits (167), Expect = 1.771e-15
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYY 307
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +Y
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAK-HPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFY 68
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:549472])

HSP 1 Score: 124.79 bits (312), Expect = 7.222e-36
Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKDRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:549472])

HSP 1 Score: 124.02 bits (310), Expect = 1.705e-35
Identity = 64/114 (56.14%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKDRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Match: ENSXETT00000037604.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV462160.1:431:1455:1 gene:ENSXETG00000014685.1 transcript:ENSXETT00000037604.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 117.472 bits (293), Expect = 5.410e-33
Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV-KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK 388
            ML+P D    IYE +F  GVM AK D RP + H EV  V NL V KA+ SLKS+ FVRE F WR  YW+L NEGI YLR+YLHLP EIVPA+++
Sbjct:    1 MLMPLDQLRAIYEVIFRDGVMVAKNDQRPQSRHAEVPAVTNLQVTKAMGSLKSRGFVRETFVWRHCYWYLTNEGIAYLRQYLHLPPEIVPASLQ 94
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347])

HSP 1 Score: 124.79 bits (312), Expect = 1.081e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347])

HSP 1 Score: 126.716 bits (317), Expect = 1.229e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347])

HSP 1 Score: 126.716 bits (317), Expect = 1.229e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347])

HSP 1 Score: 126.716 bits (317), Expect = 1.229e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Match: Rps10 (ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1914347])

HSP 1 Score: 126.331 bits (316), Expect = 1.569e-36
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTG 454
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP  P G
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRPKGPEG 111
[Close]
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|Q962R9|RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda OX=7108 GN=RpS10 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.237e-38
Identity = 78/162 (48.15%), Postives = 94/162 (58.02%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKAS------------RPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKD-APGDS-VQFKGGMGRGN 553
            ML+P   R  IYE LF+ GVM AKKD          K+ NL VIKA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR +LHLP EIVPAT+K S            RPDAPAR     S       AYR   T   +     D  PG + ++F+GG GRG 
Sbjct:    1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRAETVRRGAVGRPDAPARSAEDRS-------AYRRAPTTPAAHDKKADVGPGSADLEFRGGFGRGR 155
[Close]
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|O77302|RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus OX=35632 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.444e-37
Identity = 76/155 (49.03%), Postives = 97/155 (62.58%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK-ASRPDAPARPT-VGGSPRPAPTGAYRTGNTANMSEAVMKDAPG----DSVQFKGGMGRGNR 556
            ML+    R  IYE LF+ GV+ AKKD      H E+ V NL+VI+A+QSL S+ +V+EQF WR YYW+L NEGI YLR++LHLP EIVPAT+K  +RP+A ARP    G+PR A  G  R G       +  K   G     + QF+GG GRG +
Sbjct:    1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPK-HGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRPEA-ARPRPKEGAPR-AQVGEDRAGYRRGFGGSDKKGEAGAGADTNFQFRGGFGRGRQ 152
[Close]
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|Q9VWG3|RS10B_DROME (40S ribosomal protein S10b OS=Drosophila melanogaster OX=7227 GN=RpS10b PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 8.431e-37
Identity = 76/165 (46.06%), Postives = 94/165 (56.97%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMK--ASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDS--------------VQFKGGMGRGNR 556
            M +P   R  IYE LF+ GV+ AKKD       +   + NL+VIKA+QSL S+  V+EQFAWR YYW+L NEGI  LR YLHLP EIVP+T+K  A       RP VGG PR  P  A +TG       +  + APG S              V+F+GG GRG+R
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGG-PR-GPGDASKTGE----DRSAYRRAPGGSGVDKKGDVGPGAGEVEFRGGFGRGSR 159
[Close]
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|P63326|RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.594e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Match: sp|P63325|RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.594e-36
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP 442
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS+ +V+EQFAWR +YW+L NEGI YLR+YLHLP EIVPAT++ SRP+        G PRP
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET-------GRPRP 106
[Close]
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A182YEX1 (S10_plectin domain-containing protein OS=Anopheles stephensi OX=30069 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.907e-41
Identity = 76/159 (47.80%), Postives = 95/159 (59.75%), Query Frame = 2 
Query:  104 LKMLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTGAYRTGNTANMSEAVMKDAPGD------SVQFKGGMGRGNRM 559
            L+M +P   R  IYE LF+ GV+ A+KD       +   + NL+VIK +QSLKSKNFV+EQFAWR YYW+L NEGI YLR YLHLPAEIVP+T+K +    P R      PRP  P           M +A   D  GD       ++++GG GRGNRM
Sbjct:    1 LQMFMPKAHRVAIYEYLFKEGVLVAQKDFYAPKHPELENIPNLHVIKTMQSLKSKNFVKEQFAWRHYYWYLTNEGIEYLRAYLHLPAEIVPSTLKRAARSEPQRARTQAGPRPEGPKSGEDRQAYRRMQQAAPADKKGDVGVGAGELEYRGGFGRGNRM 159
[Close]
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A504YVP2 (Ribosomal protein S10 OS=Fasciola gigantica OX=46835 GN=FGIG_06337 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.747e-40
Identity = 80/170 (47.06%), Postives = 101/170 (59.41%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPD-----------APARPTVGG--------SPRPAPTGA-YRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 559
            ML+P D+RN IYE + + GV+ A+ D+RP   H  + V+NL+VIK ++SLKSK  VREQ+AWR+YYWFLNN+GITYLRE LHLP++I+PATMKA   D           A   PT G         +P  AP GA  + G T    E          V F+GG GRG  M
Sbjct:    1 MLLPVDVRNSIYEKIIQDGVLCARNDIRPCYNHPTINVRNLFVIKTMRSLKSKGCVREQYAWRTYYWFLNNDGITYLREVLHLPSDIIPATMKAPARDPRLAGMGMEHAAHRGPTDGRVAFRRGPVAPTGAPFGAPEKEGATVGEGE----------VHFRGGYGRGRPM 160
[Close]
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A2H1CQZ0 (Plectin/S10 domain protein OS=Fasciola hepatica OX=6192 GN=D915_001745 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.079e-40
Identity = 80/170 (47.06%), Postives = 101/170 (59.41%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPD-----------APARPTVGG--------SPRPAPTGA-YRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 559
            ML+P D+RN IYE + + GV+ A+ D+RP   H  + V+NL+VIK ++SLKSK  VREQ+AWR+YYWFLNN+GITYLRE LHLP++I+PATMKA   D           A   PT G         +P  AP GA  + G T    E          V F+GG GRG  M
Sbjct:    1 MLLPIDVRNSIYEKIIQDGVLCARNDIRPCYNHPTINVRNLFVIKTMRSLKSKGCVREQYAWRTYYWFLNNDGITYLREVLHLPSDIIPATMKAPARDPRLAGMGMEHAAHRGPTDGRVAFRRGPVAPTGAPFGAPEKEGATVGEGE----------VHFRGGYGRGRPM 160
[Close]
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A182T8Q5 (S10_plectin domain-containing protein OS=Anopheles maculatus OX=74869 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.659e-40
Identity = 75/157 (47.77%), Postives = 93/157 (59.24%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTGAYRTGNTANMSEAVMKDAPGD------SVQFKGGMGRGNRM 559
            M +P   R  IYE LF+ GV+ A+KD       +   + NL+VIK +QSLKSKNFV+EQFAWR YYW+L NEGI YLR YLHLPAEIVP+T+K +    P R      PRP  P           M +A   D  GD       ++++GG GRGNRM
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVLVAQKDFYAPKHPELENIPNLHVIKTMQSLKSKNFVKEQFAWRHYYWYLTNEGIEYLRAYLHLPAEIVPSTLKRAARSEPQRARTQAGPRPEGPKAGEDRQAYRRMQQAAPADKKGDVGVGAGELEYRGGFGRGNRM 157
[Close]
BLAST of 40S ribosomal protein S10 vs. TrEMBL
Match: A0A182RL72 (40S ribosomal protein S10 OS=Anopheles funestus OX=62324 PE=4 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 3.933e-40
Identity = 75/157 (47.77%), Postives = 93/157 (59.24%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRP-APTGAYRTGNTANMSEAVMKDAPGD------SVQFKGGMGRGNRM 559
            M +P   R  IYE LF+ GV+ A+KD       +   + NL+VIK +QSLKSKNFV+EQFAWR YYW+L NEGI YLR YLHLPAEIVP+T+K +    P R      PRP  P           M +A   D  GD       ++++GG GRGNRM
Sbjct:    1 MFMPKAHRVAIYEYLFKEGVLVAQKDFYAPKHPELENIPNLHVIKTMQSLKSKNFVKEQFAWRHYYWYLTNEGIEYLRAYLHLPAEIVPSTLKRAARSEPQRARTQAGPRPEGPKSGEDRQAYRRMQQAAPADKKGDVGVGTGELEYRGGFGRGNRM 157
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Cavefish
Match: ENSAMXT00000049382.1 (pep primary_assembly:Astyanax_mexicanus-2.0:10:24652399:24660217:-1 gene:ENSAMXG00000037914.1 transcript:ENSAMXT00000049382.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 119.398 bits (298), Expect = 6.664e-34
Identity = 57/100 (57.00%), Postives = 70/100 (70.00%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDA 406
            M++P +    IYE LF  GVM AKKD RP T H E++ V NL VI+A+ SLKS+ FVRE F WR +YW+L NEGI YLR+YLHLP EIVP  ++  R  A
Sbjct:    1 MVMPLNHLRAIYERLFRDGVMVAKKDKRPQTKHPEIQGVGNLQVIRAMGSLKSRGFVRETFTWRHFYWYLTNEGIVYLRDYLHLPPEIVPTPLQRVRKPA 100
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Cavefish
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:103038289])

HSP 1 Score: 117.857 bits (294), Expect = 2.832e-33
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG 430
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+  ARP   G
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKG 109
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011293.1 (pep scaffold:Pmarinus_7.0:GL478123:50461:51018:-1 gene:ENSPMAG00000010266.1 transcript:ENSPMAT00000011293.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 134.806 bits (338), Expect = 2.040e-40
Identity = 69/124 (55.65%), Postives = 82/124 (66.13%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQE-VKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTA 478
            ML+P D    IYE LF  GVM AKKD RP+++HQE V V NL V +A+ SLKS+ FVRE F WR +YW+L+NEGI YLR+YLHLP EIVP T+   R   PA    G  P+  P GA R   TA
Sbjct:    1 MLMPLDKLRSIYEALFRDGVMVAKKDRRPDSIHQELVGVTNLQVSRAMASLKSRGFVRETFTWRHHYWYLSNEGIGYLRDYLHLPPEIVPVTLHRVRQPLPA-SLPGRRPQTGPLGAGRGRGTA 123
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Match: rps10 (ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481])

HSP 1 Score: 124.405 bits (311), Expect = 1.580e-36
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVR--PNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKAS-RPD-APARPTVGGSPRPAPTG 454
            ML+P   R  IYE LF+ GVM AKKDV    +    E  V NL+V+KA+QSLKS+ FV+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT++   RP+ A  RP   G  RPA  G
Sbjct:    1 MLMPKKDRVAIYELLFKEGVMVAKKDVHLAKHPELAEKNVPNLHVMKAMQSLKSRGFVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQIRPETARPRPKGLGEDRPARLG 119
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003346.1 (pep scaffold:Pmarinus_7.0:GL476750:206073:206612:-1 gene:ENSPMAG00000003064.1 transcript:ENSPMAT00000003346.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 112.464 bits (280), Expect = 5.228e-32
Identity = 64/153 (41.83%), Postives = 88/153 (57.52%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPA-RPTVGGSPRPAPTG-----AYRTGNTANMSEAVMKDAPGDSV-QFKGGMG 544
            ML+PT+    IYE LF  GVM A++D RP + H EV+    L + +A++SL+S+ FVRE  AW+ +YW+L +EGI +LR YL LP EIVPA+M+  R   P+ R   G  P  A        AYR     +  +     A G  V +F+GG G
Sbjct:    1 MLLPTEQLRAIYELLFRDGVMVARRDHRPQSRHAEVRFATQLQIFRAMRSLRSRGFVRETAAWQHHYWYLTDEGIGFLRGYLRLPTEIVPASMQRFRQPTPSVRRLQGRGPGVARGASPDRQAYRRAVAKDEDKVASVGAAGLPVFEFRGGKG 153
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Yeast
Match: RPS10A (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10A has a paralog, RPS10B, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia [Source:SGD;Acc:S000005819])

HSP 1 Score: 110.153 bits (274), Expect = 4.769e-32
Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASR 397
            ML+P + RNKI++ LF+ GV+ AKKD      H+E+  KNLYVIKALQSL SK +V+ QF+W+ YY+ L  EG+ YLREYL+LP  IVP T    R
Sbjct:    1 MLMPKEDRNKIHQYLFQEGVVVAKKDFN-QAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQER 95
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Yeast
Match: RPS10B (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia [Source:SGD;Acc:S000004843])

HSP 1 Score: 109.383 bits (272), Expect = 1.051e-31
Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASR 397
            ML+P   RNKI++ LF+ GV+ AKKD      H+E+  KNLYVIKALQSL SK +V+ QF+W+ YY+ L  EG+ YLREYL+LP  IVP T    R
Sbjct:    1 MLMPKQERNKIHQYLFQEGVVVAKKDFN-QAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQER 95
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Nematostella
Match: EDO47718 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLM9])

HSP 1 Score: 119.783 bits (299), Expect = 1.722e-34
Identity = 70/148 (47.30%), Postives = 83/148 (56.08%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP-ARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRG 550
            MLIP   R  IYE LF+ GV  AKKD       Q   V NL+VIKALQSLKS+ +V E+F W+ YYW L NEGITYLR++LHLP EIVPAT++     A  ARP   G       G    G   +      +  P   V+ KGG G G
Sbjct:    1 MLIPKKNRVIIYEYLFKEGVCVAKKDFNSPKHTQIENVPNLHVIKALQSLKSRGYVEEKFCWKHYYWNLTNEGITYLRDFLHLPTEIVPATLRRQVTRAETARPRPKGM-----DGPRGPGEGGDRDRESYRRGPPPGVEGKGGAGSG 143
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:101158101])

HSP 1 Score: 118.242 bits (295), Expect = 1.489e-33
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+  ARP   G    RPA
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGMEGERPA 116
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BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:101158101])

HSP 1 Score: 119.013 bits (297), Expect = 2.719e-33
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPDAPARPTVGG--SPRPA 445
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+  ARP   G    RPA
Sbjct:   37 MLMPKKNRIAIYELLFKEGVMVAKKDVH-LAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPET-ARPRPKGMEGERPA 152
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: rps10 (ribosomal protein S10 [Source:NCBI gene;Acc:101158101])

HSP 1 Score: 117.857 bits (294), Expect = 4.196e-33
Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEV---KVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATM-KASRPD-APARPTVGGSPRPA 445
            ML+P   R  IYE LF+ GVM AKKDV     H E+    V NL+V+KA+QSLKS  +V+EQFAWR +YW+L NEGI YLR++LHLP EIVPAT+ + +RP+ A  RP      RPA
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHL-AKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPETARPRPKGMEGERPA 116
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: plecb (plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2])

HSP 1 Score: 120.168 bits (300), Expect = 3.740e-31
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP 409
            ML+P      IYE LF  GVM AKKD RP  +H EV+ V+NL VI+ + SLKS+ +V+E FAWR +YW+L N+GI YLR++LHLPAEIVPA+++  R  AP
Sbjct:    5 MLMPLRDLRAIYEVLFRDGVMVAKKDKRPQIMHPEVQDVRNLQVIRVMASLKSRGYVKETFAWRHFYWYLTNDGIVYLRDFLHLPAEIVPASLQRIRKPAP 105
[Close]
BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Match: plecb (plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2])

HSP 1 Score: 120.168 bits (300), Expect = 3.925e-31
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVK-VKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP 409
            ML+P      IYE LF  GVM AKKD RP  +H EV+ V+NL VI+ + SLKS+ +V+E FAWR +YW+L N+GI YLR++LHLPAEIVPA+++  R  AP
Sbjct:    5 MLMPLRDLRAIYEVLFRDGVMVAKKDKRPQIMHPEVQDVRNLQVIRVMASLKSRGYVKETFAWRHFYWYLTNDGIVYLRDFLHLPAEIVPASLQRIRKPAP 105
[Close]
BLAST of 40S ribosomal protein S10 vs. Planmine SMEST
Match: SMESG000034720.1 (SMESG000034720.1)

HSP 1 Score: 313.153 bits (801), Expect = 1.129e-110
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 2 
Query:  110 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 559
            MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM
Sbjct:    1 MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSLKSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAPARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM 150
The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S10 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPS10-NUDT32.053e-3657.02RPS10-NUDT3 readthrough [Source:HGNC Symbol;Acc:HG... [more]
RPS102.174e-3657.02ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS102.174e-3657.02ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS102.174e-3657.02ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC... [more]
RPS102.174e-3657.02ribosomal protein S10 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps-109.976e-3446.26Ribosomal Protein, Small subunit [Source:UniProtK... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RpS10b8.411e-3846.06gene:FBgn0285947 transcript:FBtr0074732[more]
RpS10b8.411e-3846.06gene:FBgn0285947 transcript:FBtr0344339[more]
RpS10b8.411e-3846.06gene:FBgn0285947 transcript:FBtr0074731[more]
RpS10b8.411e-3846.06gene:FBgn0285947 transcript:FBtr0308192[more]
RpS10a1.545e-3044.72gene:FBgn0027494 transcript:FBtr0085194[more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rps102.782e-3355.93ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
rps102.782e-3355.93ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
rps101.771e-1555.07ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rps107.222e-3656.14ribosomal protein S10 [Source:NCBI gene;Acc:549472... [more]
rps101.705e-3556.14ribosomal protein S10 [Source:NCBI gene;Acc:549472... [more]
ENSXETT00000037604.15.410e-3359.57pep primary_assembly:Xenopus_tropicalis_v9.1:KV462... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rps101.081e-3657.02ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1... [more]
Rps101.229e-3657.02ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1... [more]
Rps101.229e-3657.02ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1... [more]
Rps101.229e-3657.02ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1... [more]
Rps101.569e-3656.30ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1... [more]
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BLAST of 40S ribosomal protein S10 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q962R9|RS10_SPOFR1.237e-3848.1540S ribosomal protein S10 OS=Spodoptera frugiperda... [more]
sp|O77302|RS10_LUMRU1.444e-3749.0340S ribosomal protein S10 OS=Lumbricus rubellus OX... [more]
sp|Q9VWG3|RS10B_DROME8.431e-3746.0640S ribosomal protein S10b OS=Drosophila melanogas... [more]
sp|P63326|RS10_RAT8.594e-3657.0240S ribosomal protein S10 OS=Rattus norvegicus OX=... [more]
sp|P63325|RS10_MOUSE8.594e-3657.0240S ribosomal protein S10 OS=Mus musculus OX=10090... [more]
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BLAST of 40S ribosomal protein S10 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A182YEX13.907e-4147.80S10_plectin domain-containing protein OS=Anopheles... [more]
A0A504YVP21.747e-4047.06Ribosomal protein S10 OS=Fasciola gigantica OX=468... [more]
A0A2H1CQZ02.079e-4047.06Plectin/S10 domain protein OS=Fasciola hepatica OX... [more]
A0A182T8Q52.659e-4047.77S10_plectin domain-containing protein OS=Anopheles... [more]
A0A182RL723.933e-4047.7740S ribosomal protein S10 OS=Anopheles funestus OX... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSAMXT00000049382.16.664e-3457.00pep primary_assembly:Astyanax_mexicanus-2.0:10:246... [more]
rps102.832e-3356.76ribosomal protein S10 [Source:NCBI gene;Acc:103038... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSPMAT00000011293.12.040e-4055.65pep scaffold:Pmarinus_7.0:GL478123:50461:51018:-1 ... [more]
rps101.580e-3656.30ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-04... [more]
ENSPMAT00000003346.15.228e-3241.83pep scaffold:Pmarinus_7.0:GL476750:206073:206612:-... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPS10A4.769e-3255.21Protein component of the small (40S) ribosomal sub... [more]
RPS10B1.051e-3155.21Protein component of the small (40S) ribosomal sub... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO477181.722e-3447.30Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 40S ribosomal protein S10 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rps101.489e-3355.93ribosomal protein S10 [Source:NCBI gene;Acc:101158... [more]
rps102.719e-3355.93ribosomal protein S10 [Source:NCBI gene;Acc:101158... [more]
rps104.196e-3355.56ribosomal protein S10 [Source:NCBI gene;Acc:101158... [more]
plecb3.740e-3156.44plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2][more]
plecb3.925e-3156.44plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2][more]
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BLAST of 40S ribosomal protein S10 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000034720.11.129e-110100.00SMESG000034720.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30008769 ID=SMED30008769|Name=40S ribosomal protein S10|organism=Schmidtea mediterranea sexual|type=transcript|length=609bp
AAAAGGAATTATATAAATTAGGTTTTTAAAATAAAATCTATCAGTAAAAT
AATTACTAAAAATAACTTGTTTAAATAAGCTTTATAAAGTGTAGTAAAAA
TTTTTAAAAATGCTGATTCCAACAGACATTAGAAATAAAATTTATGAAAA
TTTATTTGAAAGCGGTGTTATGACCGCCAAAAAGGATGTCAGACCAAATA
CTGTCCACCAAGAAGTTAAAGTCAAGAATTTGTATGTGATTAAAGCTTTG
CAATCTTTAAAATCAAAGAACTTTGTTCGAGAGCAATTCGCATGGAGATC
ATATTACTGGTTTTTGAATAATGAAGGAATTACTTATCTTAGAGAATACT
TGCATTTGCCTGCTGAAATTGTTCCAGCTACAATGAAAGCTTCGCGCCCT
GATGCTCCAGCGAGACCAACTGTTGGAGGATCACCAAGACCAGCACCTAC
TGGAGCTTACAGAACTGGCAACACTGCCAATATGTCTGAAGCTGTCATGA
AAGATGCTCCTGGAGATTCAGTTCAATTCAAAGGTGGTATGGGACGAGGA
AACCGCATGTAATTTAAGAATAAATATTGGATTTGATTTAAAAAAAAAAG
ATCGGAAGA
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protein sequence of SMED30008769-orf-1

>SMED30008769-orf-1 ID=SMED30008769-orf-1|Name=SMED30008769-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=151bp
MLIPTDIRNKIYENLFESGVMTAKKDVRPNTVHQEVKVKNLYVIKALQSL
KSKNFVREQFAWRSYYWFLNNEGITYLREYLHLPAEIVPATMKASRPDAP
ARPTVGGSPRPAPTGAYRTGNTANMSEAVMKDAPGDSVQFKGGMGRGNRM
*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000039gamma neoblast
PLANA:0000429neoblast
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR037447Rps10
IPR005326S10_plectin_N
Vocabulary: cellular component
TermDefinition
GO:0005840ribosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005326Plectin/S10, N-terminalPFAMPF03501S10_plectincoord: 3..95
e-value: 2.5E-40
score: 136.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3DG3DSA:1.10.10.10coord: 1..105
e-value: 3.6E-43
score: 147.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..114
IPR03744740S Ribosomal protein S10PANTHERPTHR1214640S RIBOSOMAL PROTEIN S10coord: 1..112