F-box domain-containing protein

Overview


Name	F-box domain-containing protein
Smed ID	SMED30008707
Length (bp)	1880

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of F-box domain-containing protein (SMED30008707) t-SNE clustered cells

Violin plots show distribution of expression levels for F-box domain-containing protein (SMED30008707) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of F-box domain-containing protein (SMED30008707) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for F-box domain-containing protein (SMED30008707) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30008707

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
cephalic ganglia	SMED30008707	SMESG000026800.1	dd_Smed_v4_3719_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30008707	SMESG000026800.1	dd_Smed_v4_3719_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Human
Match: FBXL20 (F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679])

HSP 1 Score: 60.077 bits (144), Expect = 6.716e-9
Identity = 78/372 (20.97%), Postives = 150/372 (40.32%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            + +++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+         T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G             E   +  I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   14 KATMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGC---------TQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 374

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Human
Match: FBXL20 (F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679])

HSP 1 Score: 60.077 bits (144), Expect = 7.619e-9
Identity = 79/372 (21.24%), Postives = 151/372 (40.59%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+         T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 372

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Human
Match: FBXL20 (F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679])

HSP 1 Score: 60.077 bits (144), Expect = 7.619e-9
Identity = 79/372 (21.24%), Postives = 151/372 (40.59%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+         T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 372

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Human
Match: FBXL20 (F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679])

HSP 1 Score: 59.6918 bits (143), Expect = 8.723e-9
Identity = 77/353 (21.81%), Postives = 150/353 (42.49%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNL---RQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDL-ITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ ++L   ++D +G  + +       +    G  L+ + +   L +    L   A     ++ L L+           D    P  L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVEN-------ISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKT-----TDAEGCPL-LEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 340

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Human
Match: SKP2 (S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901])

HSP 1 Score: 55.0694 bits (131), Expect = 2.521e-7
Identity = 34/120 (28.33%), Postives = 65/120 (54.17%), Query Frame = 2

Query:  359 ITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL-----NLRQDCKG-------LAINSTEVFLDILLPITGSTLK--YIEMASDLITIPVLEELANRSPQLKYLILD 676
            ++++ L D+L+L IFS L   +L K++ VC++WY++A D +LWQ L     NL  D  G       +A      F+D  L    S  +  ++++++ +I +  L  + ++  +L+ L L+
Sbjct:   95 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE 214

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Celegans
Match: T28B4.1 (pep chromosome:WBcel235:X:6592579:6596135:1 gene:WBGene00020884.1 transcript:T28B4.1a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T28B4.1)

HSP 1 Score: 405.216 bits (1040), Expect = 8.130e-135
Identity = 214/501 (42.71%), Postives = 333/501 (66.47%), Query Frame = 2

Query:  329 NSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITG---STLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            N  Y ++    T  +L DK++  IF YL+ + + ++ +VC++W   + +  LW++++ R +  G+ +N     +D  + + G   S L+ +E+A+DLIT  VL ELAN++P+L+YL LDFS AMQLHDF DL SFP+ L  L +CLS+ IF+EG +RK+Y F+SS+E LH+IGT+E   +EEEE+YE +N+ K+K   PNLRV+NL+G+ F+ D HV+ +++NC HLE + +N+C KV GS L+++L+RC K+++L + H  L +  +  V+WEK +IEELDI  TEL+S  L  IL R+ +L++L     +  TD++L     +  +  ++ +++    S+ E  ++  +  +G Q  G+ L G+  L EYFW N+I  L+NIR+ V+G A+    K   ++H+DQ V+  AQ+CP L  LE++WD +T+RFSDKS KFID +R+KC  L +  LSDG+YYE+V+SNFERAD++ VVRTT    T ++   R +  L+FN
Sbjct:   37 NQQYYTERNQYTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGGIQVNPQ--CIDHFIQLIGTRFSELRIVELATDLITPNVLYELANKAPKLQYLTLDFSTAMQLHDFTDLQSFPSRLKSLTLCLSENIFLEGFLRKVYTFISSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQFLPNLRVVNLWGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEYFWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLRFSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCSRYFNKLLFN 535

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Celegans
Match: T28B4.1 (pep chromosome:WBcel235:X:6590192:6596135:1 gene:WBGene00020884.1 transcript:T28B4.1b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T28B4.1)

HSP 1 Score: 404.445 bits (1038), Expect = 1.283e-134
Identity = 212/490 (43.27%), Postives = 329/490 (67.14%), Query Frame = 2

Query:  362 TFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITG---STLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            T  +L DK++  IF YL+ + + ++ +VC++W   + +  LW++++ R +  G+ +N     +D  + + G   S L+ +E+A+DLIT  VL ELAN++P+L+YL LDFS AMQLHDF DL SFP+ L  L +CLS+ IF+EG +RK+Y F+SS+E LH+IGT+E   +EEEE+YE +N+ K+K   PNLRV+NL+G+ F+ D HV+ +++NC HLE + +N+C KV GS L+++L+RC K+++L + H  L +  +  V+WEK +IEELDI  TEL+S  L  IL R+ +L++L     +  TD++L     +  +  ++ +++    S+ E  ++  +  +G Q  G+ L G+  L EYFW N+I  L+NIR+ V+G A+    K   ++H+DQ V+  AQ+CP L  LE++WD +T+RFSDKS KFID +R+KC  L +  LSDG+YYE+V+SNFERAD++ VVRTT    T ++   R +  L+FN
Sbjct:   31 TIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGGIQVNPQ--CIDHFIQLIGTRFSELRIVELATDLITPNVLYELANKAPKLQYLTLDFSTAMQLHDFTDLQSFPSRLKSLTLCLSENIFLEGFLRKVYTFISSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQFLPNLRVVNLWGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEYFWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLRFSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCSRYFNKLLFN 518

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Celegans
Match: T28B4.1 (pep chromosome:WBcel235:X:6588800:6596133:1 gene:WBGene00020884.1 transcript:T28B4.1c.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T28B4.1)

HSP 1 Score: 404.445 bits (1038), Expect = 2.848e-134
Identity = 212/490 (43.27%), Postives = 329/490 (67.14%), Query Frame = 2

Query:  362 TFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITG---STLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            T  +L DK++  IF YL+ + + ++ +VC++W   + +  LW++++ R +  G+ +N     +D  + + G   S L+ +E+A+DLIT  VL ELAN++P+L+YL LDFS AMQLHDF DL SFP+ L  L +CLS+ IF+EG +RK+Y F+SS+E LH+IGT+E   +EEEE+YE +N+ K+K   PNLRV+NL+G+ F+ D HV+ +++NC HLE + +N+C KV GS L+++L+RC K+++L + H  L +  +  V+WEK +IEELDI  TEL+S  L  IL R+ +L++L     +  TD++L     +  +  ++ +++    S+ E  ++  +  +G Q  G+ L G+  L EYFW N+I  L+NIR+ V+G A+    K   ++H+DQ V+  AQ+CP L  LE++WD +T+RFSDKS KFID +R+KC  L +  LSDG+YYE+V+SNFERAD++ VVRTT    T ++   R +  L+FN
Sbjct:   65 TIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGGIQVNPQ--CIDHFIQLIGTRFSELRIVELATDLITPNVLYELANKAPKLQYLTLDFSTAMQLHDFTDLQSFPSRLKSLTLCLSENIFLEGFLRKVYTFISSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQFLPNLRVVNLWGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEYFWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLRFSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCSRYFNKLLFN 552

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Celegans
Match: T28B4.1 (pep chromosome:WBcel235:X:6587898:6596135:1 gene:WBGene00020884.1 transcript:T28B4.1c.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T28B4.1)

HSP 1 Score: 404.445 bits (1038), Expect = 2.848e-134
Identity = 212/490 (43.27%), Postives = 329/490 (67.14%), Query Frame = 2

Query:  362 TFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITG---STLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            T  +L DK++  IF YL+ + + ++ +VC++W   + +  LW++++ R +  G+ +N     +D  + + G   S L+ +E+A+DLIT  VL ELAN++P+L+YL LDFS AMQLHDF DL SFP+ L  L +CLS+ IF+EG +RK+Y F+SS+E LH+IGT+E   +EEEE+YE +N+ K+K   PNLRV+NL+G+ F+ D HV+ +++NC HLE + +N+C KV GS L+++L+RC K+++L + H  L +  +  V+WEK +IEELDI  TEL+S  L  IL R+ +L++L     +  TD++L     +  +  ++ +++    S+ E  ++  +  +G Q  G+ L G+  L EYFW N+I  L+NIR+ V+G A+    K   ++H+DQ V+  AQ+CP L  LE++WD +T+RFSDKS KFID +R+KC  L +  LSDG+YYE+V+SNFERAD++ VVRTT    T ++   R +  L+FN
Sbjct:   65 TIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGGIQVNPQ--CIDHFIQLIGTRFSELRIVELATDLITPNVLYELANKAPKLQYLTLDFSTAMQLHDFTDLQSFPSRLKSLTLCLSENIFLEGFLRKVYTFISSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQFLPNLRVVNLWGVPFITDEHVDAISSNCAHLECLCVNYCPKVTGSCLKLVLQRCRKLKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLECMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEYFWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLRFSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCSRYFNKLLFN 552

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Celegans
Match: fbxl-1 (Uncharacterized F-box/LRR-repeat protein C02F5.7 [Source:UniProtKB/Swiss-Prot;Acc:P34284])

HSP 1 Score: 63.929 bits (154), Expect = 1.719e-10
Identity = 86/377 (22.81%), Postives = 157/377 (41.64%), Query Frame = 2

Query:  302 ARRCSVYPRNSIYPSDVTYITFNE-LQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITSTEL-SSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTET 1354
            A++  +Y   ++ P+ V     N  L  +++LK+FS+L  + L + A VCR W  +A D + WQ +               NL + C G    L++   E   D  L    S    +E  S      +T    E L     +L YL L+  +++       +     +L YL I   D I   G ++ I     SL+ L L G          E         ++AH   ++ +NL     + D  V+ +AN    LE + ++ C ++   SL  L +  + ++ L +  C  L D   + +     ++E LD+    L S   +  +      L+ L++ HC+  TD+ + + + + +   +  ++L   P LT++
Sbjct:   35 AKQNQMYLITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRG-VQIILSNCKSLDTLILRGC---------EGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESI-QNLASKHRETLNVLELDNCPQLTDS 400

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Fly
Match: CG2010 (gene:FBgn0039667 transcript:FBtr0333187)

HSP 1 Score: 453.751 bits (1166), Expect = 5.531e-154
Identity = 234/490 (47.76%), Postives = 348/490 (71.02%), Query Frame = 2

Query:  353 TYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            T +T  +L DK++L IFSYL+ R++ ++A +CR+W QIA+D+ LW+ ++LR +  GL + S E+ L ++    G TL+YIE+  +LIT  VL EL+ + P L +++LDFS AMQLHDF+++ +FP  L Y+C+CLS+VIFMEG MRKIY F++ LEVLHLIGT+E   EEEEEIYEVIN+ K+K+ TPNLRVINLYGI F+DDSH++  ++NCI LE +A+NFC KV GS+L+ L++R  ++  L+M    L+ ++++   W+K  ++ELDIT+T+LS+ CL D+L RI +LK+L+ G  + F D +L + ME+G    + ++DL  + ++++  +LKF+   G QL+   L G   + +  W +++  L N +I V+G A+    K    +H+DQ+++  A +C  LE LE++WDPD +RFSDKS+K ID +R+KC +L+   LSDG+YYE VK+NFERAD++ VVRTTT    S   LLR+Y DL+FN
Sbjct:   26 TRLTIEKLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEMLLQLISVRFGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVINLYGINFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTSLKSEFVMQAEWDKCALQELDITATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWMESGTTRSLISLDLDSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITDQLWMSILPLLGNCKIIVMGTAE----KLGVNIHVDQLMDTIASNCGNLERLELRWDPDNLRFSDKSQKAIDILRVKCLKLRCMVLSDGRYYETVKANFERADRITVVRTTTCCRVSPYHLLRNYNDLIFN 511

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Fly
Match: CG2010 (gene:FBgn0039667 transcript:FBtr0085427)

HSP 1 Score: 453.751 bits (1166), Expect = 5.531e-154
Identity = 234/490 (47.76%), Postives = 348/490 (71.02%), Query Frame = 2

Query:  353 TYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            T +T  +L DK++L IFSYL+ R++ ++A +CR+W QIA+D+ LW+ ++LR +  GL + S E+ L ++    G TL+YIE+  +LIT  VL EL+ + P L +++LDFS AMQLHDF+++ +FP  L Y+C+CLS+VIFMEG MRKIY F++ LEVLHLIGT+E   EEEEEIYEVIN+ K+K+ TPNLRVINLYGI F+DDSH++  ++NCI LE +A+NFC KV GS+L+ L++R  ++  L+M    L+ ++++   W+K  ++ELDIT+T+LS+ CL D+L RI +LK+L+ G  + F D +L + ME+G    + ++DL  + ++++  +LKF+   G QL+   L G   + +  W +++  L N +I V+G A+    K    +H+DQ+++  A +C  LE LE++WDPD +RFSDKS+K ID +R+KC +L+   LSDG+YYE VK+NFERAD++ VVRTTT    S   LLR+Y DL+FN
Sbjct:   26 TRLTIEKLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEMLLQLISVRFGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVINLYGINFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTSLKSEFVMQAEWDKCALQELDITATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWMESGTTRSLISLDLDSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITDQLWMSILPLLGNCKIIVMGTAE----KLGVNIHVDQLMDTIASNCGNLERLELRWDPDNLRFSDKSQKAIDILRVKCLKLRCMVLSDGRYYETVKANFERADRITVVRTTTCCRVSPYHLLRNYNDLIFN 511

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Fly
Match: CG2010 (gene:FBgn0039667 transcript:FBtr0085428)

HSP 1 Score: 453.366 bits (1165), Expect = 1.222e-153
Identity = 236/502 (47.01%), Postives = 350/502 (69.72%), Query Frame = 2

Query:  317 VYPRNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            VY  +    S     T  +L DK++L IFSYL+ R++ ++A +CR+W QIA+D+ LW+ ++LR +  GL + S E+ L ++    G TL+YIE+  +LIT  VL EL+ + P L +++LDFS AMQLHDF+++ +FP  L Y+C+CLS+VIFMEG MRKIY F++ LEVLHLIGT+E   EEEEEIYEVIN+ K+K+ TPNLRVINLYGI F+DDSH++  ++NCI LE +A+NFC KV GS+L+ L++R  ++  L+M    L+ ++++   W+K  ++ELDIT+T+LS+ CL D+L RI +LK+L+ G  + F D +L + ME+G    + ++DL  + ++++  +LKF+   G QL+   L G   + +  W +++  L N +I V+G A+    K    +H+DQ+++  A +C  LE LE++WDPD +RFSDKS+K ID +R+KC +L+   LSDG+YYE VK+NFERAD++ VVRTTT    S   LLR+Y DL+FN
Sbjct:   18 VYLSDGTVRSPFADTTIEKLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEMLLQLISVRFGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVINLYGINFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTSLKSEFVMQAEWDKCALQELDITATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWMESGTTRSLISLDLDSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITDQLWMSILPLLGNCKIIVMGTAE----KLGVNIHVDQLMDTIASNCGNLERLELRWDPDNLRFSDKSQKAIDILRVKCLKLRCMVLSDGRYYETVKANFERADRITVVRTTTCCRVSPYHLLRNYNDLIFN 515

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Fly
Match: FBXO11 (gene:FBgn0037760 transcript:FBtr0334684)

HSP 1 Score: 52.7582 bits (125), Expect = 1.078e-6
Identity = 22/52 (42.31%), Postives = 39/52 (75.00%), Query Frame = 2

Query:  341 PSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL 496
            P+   Y+ + EL D+++L IFSYL ++DL ++A+VC+++  IA+D+ LW+ L
Sbjct:  361 PTAAQYLQY-ELPDEVLLAIFSYLMEQDLCRLALVCKRFNTIANDTELWKRL 411

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Fly
Match: FBXO11 (gene:FBgn0037760 transcript:FBtr0082155)

HSP 1 Score: 52.7582 bits (125), Expect = 1.078e-6
Identity = 22/52 (42.31%), Postives = 39/52 (75.00%), Query Frame = 2

Query:  341 PSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL 496
            P+   Y+ + EL D+++L IFSYL ++DL ++A+VC+++  IA+D+ LW+ L
Sbjct:  361 PTAAQYLQY-ELPDEVLLAIFSYLMEQDLCRLALVCKRFNTIANDTELWKRL 411

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Zebrafish
Match: fbxl20 (F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27])

HSP 1 Score: 65.4698 bits (158), Expect = 8.916e-11
Identity = 80/370 (21.62%), Postives = 152/370 (41.08%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTET 1354
            R  ++ ++   +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S      IT      L+   P+LK+L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G             E   +  I  H P L  +NL     + D  +  +   C  L+++ ++ C  +  + L  L + C ++R L +  C  L D    ++     ++E++D+    +++ + L  + +    L+ L++ HC+  TD  + R + +G  A  R   I+L   P +T+ 
Sbjct:   12 RFEMFSNNDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIELLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRCCPGLKGLFLKGC---------TQLEDEALKHIGGHCPELVTLNLQTCSQITDEGLITICRGCHRLQSLCVSGCANITDAILNALGQNCPRLRILEVARCSQLTDVGFTSLARNCHELEKMDLEECVQITDATLIQLSIHCPRLQVLSLSHCELITDDGI-RQLGSGPCAHDRLEVIELDNCPLITDA 370

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Zebrafish
Match: fbxl20 (F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27])

HSP 1 Score: 56.9954 bits (136), Expect = 4.147e-8
Identity = 78/360 (21.67%), Postives = 145/360 (40.28%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGF------VDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTET 1354
            +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S      IT      L+   P+LK+L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G             E   +  I  H P L  +N   +        + D  +  +   C  L+++ ++ C  +  + L  L + C ++R L +  C  L D    ++     ++E++D+    ++ + L  + +    L+ L++ HC+  TD  + R + +G  A  R   I+L   P +T+ 
Sbjct:   13 KLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIELLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRCCPGLKGLFLKGC---------TQLEDEALKHIGGHCPELVTLNFMIVCLCVNEQQITDEGLITICRGCHRLQSLCVSGCANITDAILNALGQNCPRLRILEVARCSQLTDVGFTSLARNCHELEKMDLEEC-ITDATLIQLSIHCPRLQVLSLSHCELITDDGI-RQLGSGPCAHDRLEVIELDNCPLITDA 360

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Xenopus
Match: adcy3 (adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-1007339])

HSP 1 Score: 62.3882 bits (150), Expect = 9.588e-10
Identity = 78/351 (22.22%), Postives = 150/351 (42.74%), Query Frame = 2

Query:  332 SIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNL---RQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDL-ITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTETPV 1360
            S++ ++   +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ ++L   ++D +G  + +            G  L+ + +   L +    L   A     ++ L L+    +      D    P  L  L I   D I  +G+ + + +    L +L L G  ++  E  +          I +H P L  +NL     + D  +  +   C  L+++  + C  +  S L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  R   I+L   P +T+  +
Sbjct:   11 SMFSNNDEALINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENIS-------KRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKI-----TDAEGCP-QLEQLNISWCDQISKDGI-QALVKGCGGLRLLSLKGCTQLEDEALKF---------IGSHCPELVTLNLQACSQITDDGLITICRGCHKLQSLCASGCSNITDSILNALGQNCPRLRILEVARCSQLTDLGFTTLAKNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDRLEVIELDNCPLITDASL 337

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Xenopus
Match: adcy3 (adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-1007339])

HSP 1 Score: 62.003 bits (149), Expect = 2.019e-9
Identity = 79/355 (22.25%), Postives = 144/355 (40.56%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTET 1354
            +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+        IT      L+    +L+ L L    ++       ++     L  L I   D I  +G+ + + +    L +L L G  ++  E  +          I +H P L  +NL     + D  +  +   C  L+++  + C  +  S L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  R   I+L   P +T+ 
Sbjct:  106 KLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKITDATSTSLSKFCSKLRQLDLASCTSITNLSLKAISEGCPQLEQLNISWCDQISKDGI-QALVKGCGGLRLLSLKGCTQLEDEALKF---------IGSHCPELVTLNLQACSQITDDGLITICRGCHKLQSLCASGCSNITDSILNALGQNCPRLRILEVARCSQLTDLGFTTLAKNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDRLEVIELDNCPLITDA 449

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Xenopus
Match: adcy3 (adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-1007339])

HSP 1 Score: 61.2326 bits (147), Expect = 2.777e-9
Identity = 80/370 (21.62%), Postives = 151/370 (40.81%), Query Frame = 2

Query:  332 SIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTETPV 1360
            S++ ++   +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+        IT      L+    +L+ L L    ++       ++     L  L I   D I  +G+ + + +    L +L L G  ++  E  +          I +H P L  +NL     + D  +  +   C  L+++  + C  +  S L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  R   I+L   P +T+  +
Sbjct:   11 SMFSNNDEALINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKITDATSTSLSKFCSKLRQLDLASCTSITNLSLKAISEGCPQLEQLNISWCDQISKDGI-QALVKGCGGLRLLSLKGCTQLEDEALKF---------IGSHCPELVTLNLQACSQITDDGLITICRGCHKLQSLCASGCSNITDSILNALGQNCPRLRILEVARCSQLTDLGFTTLAKNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDRLEVIELDNCPLITDASL 369

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Xenopus
Match: adcy3 (adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-1007339])

HSP 1 Score: 60.8474 bits (146), Expect = 3.050e-9
Identity = 80/368 (21.74%), Postives = 150/368 (40.76%), Query Frame = 2

Query:  332 SIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTET 1354
            S++ ++   +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+        IT      L+    +L+ L L    ++       ++     L  L I   D I  +G+ + + +    L +L L G  ++  E  +          I +H P L  +NL     + D  +  +   C  L+++  + C  +  S L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  R   I+L   P +T+ 
Sbjct:   10 SMFSNNDEALINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKITDATSTSLSKFCSKLRQLDLASCTSITNLSLKAISEGCPQLEQLNISWCDQISKDGI-QALVKGCGGLRLLSLKGCTQLEDEALKF---------IGSHCPELVTLNLQACSQITDDGLITICRGCHKLQSLCASGCSNITDSILNALGQNCPRLRILEVARCSQLTDLGFTTLAKNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDRLEVIELDNCPLITDA 366

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Xenopus
Match: adcy3 (adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-1007339])

HSP 1 Score: 59.6918 bits (143), Expect = 7.215e-9
Identity = 79/357 (22.13%), Postives = 145/357 (40.62%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTETPV 1360
            +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+        IT      L+    +L+ L L    ++       ++     L  L I   D I  +G ++ + +    L +L L G  ++  E  +          I +H P L  +NL     + D  +  +   C  L+++  + C  +  S L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  R   I+L   P +T+  +
Sbjct:   14 KLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKITDATSTSLSKFCSKLRQLDLASCTSITNLSLKAISEGCPQLEQLNISWCDQISKDG-IQALVKGCGGLRLLSLKGCTQLEDEALKF---------IGSHCPELVTLNLQACSQITDDGLITICRGCHKLQSLCASGCSNITDSILNALGQNCPRLRILEVARCSQLTDLGFTTLAKNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDRLEVIELDNCPLITDASL 359

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Mouse
Match: Fbxl20 (F-box and leucine-rich repeat protein 20 [Source:MGI Symbol;Acc:MGI:1919444])

HSP 1 Score: 60.4622 bits (145), Expect = 3.495e-9
Identity = 80/372 (21.51%), Postives = 152/372 (40.86%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S       T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 372

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Mouse
Match: Skp2 (S-phase kinase-associated protein 2 (p45) [Source:MGI Symbol;Acc:MGI:1351663])

HSP 1 Score: 50.8322 bits (120), Expect = 3.713e-6
Identity = 19/48 (39.58%), Postives = 36/48 (75.00%), Query Frame = 2

Query:  359 ITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNL 502
            ++++ L D+L+L IFS L   +L +++ VC++WY+++ D +LWQ L+L
Sbjct:   60 VSWDSLPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLWQSLDL 107

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Mouse
Match: Skp2 (S-phase kinase-associated protein 2 (p45) [Source:MGI Symbol;Acc:MGI:1351663])

HSP 1 Score: 50.447 bits (119), Expect = 4.190e-6
Identity = 19/48 (39.58%), Postives = 36/48 (75.00%), Query Frame = 2

Query:  359 ITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNL 502
            ++++ L D+L+L IFS L   +L +++ VC++WY+++ D +LWQ L+L
Sbjct:   95 VSWDSLPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLWQSLDL 142

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Mouse
Match: AC139209.1 (pep chromosome:GRCm38:CHR_MG4288_PATCH:9113664:9139711:-1 gene:ENSMUSG00000111328.2 transcript:ENSMUST00000230506.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AC139209.1)

HSP 1 Score: 50.447 bits (119), Expect = 4.510e-6
Identity = 19/48 (39.58%), Postives = 36/48 (75.00%), Query Frame = 2

Query:  359 ITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNL 502
            ++++ L D+L+L IFS L   +L +++ VC++WY+++ D +LWQ L+L
Sbjct:   93 VSWDSLPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLWQSLDL 140

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Mouse
Match: AC139209.1 (pep chromosome:GRCm38:CHR_MG4288_PATCH:9113664:9139711:-1 gene:ENSMUSG00000111328.2 transcript:ENSMUST00000213567.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AC139209.1)

HSP 1 Score: 50.447 bits (119), Expect = 4.510e-6
Identity = 19/48 (39.58%), Postives = 36/48 (75.00%), Query Frame = 2

Query:  359 ITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNL 502
            ++++ L D+L+L IFS L   +L +++ VC++WY+++ D +LWQ L+L
Sbjct:   93 VSWDSLPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLWQSLDL 140

[Close]

BLAST of F-box domain-containing protein vs. UniProt/SwissProt
Match: sp|P34284|FBXL_CAEEL (F-box/LRR-repeat protein fbxl-1 OS=Caenorhabditis elegans OX=6239 GN=fbxl-1 PE=2 SV=3)

HSP 1 Score: 63.5438 bits (153), Expect = 2.707e-9
Identity = 86/377 (22.81%), Postives = 157/377 (41.64%), Query Frame = 2

Query:  302 ARRCSVYPRNSIYPSDVTYITFNE-LQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITSTEL-SSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTET 1354
            A++  +Y   ++ P+ V     N  L  +++LK+FS+L  + L + A VCR W  +A D + WQ +               NL + C G    L++   E   D  L    S    +E  S      +T    E L     +L YL L+  +++       +     +L YL I   D I   G ++ I     SL+ L L G          E         ++AH   ++ +NL     + D  V+ +AN    LE + ++ C ++   SL  L +  + ++ L +  C  L D   + +     ++E LD+    L S   +  +      L+ L++ HC+  TD+ + + + + +   +  ++L   P LT++
Sbjct:   35 AKQNQMYLITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRG-VQIILSNCKSLDTLILRGC---------EGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESI-QNLASKHRETLNVLELDNCPQLTDS 400

[Close]

BLAST of F-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9CZV8|FXL20_MOUSE (F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3)

HSP 1 Score: 60.4622 bits (145), Expect = 2.445e-8
Identity = 80/372 (21.51%), Postives = 152/372 (40.86%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S       T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 372

[Close]

BLAST of F-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96IG2|FXL20_HUMAN (F-box/LRR-repeat protein 20 OS=Homo sapiens OX=9606 GN=FBXL20 PE=1 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 3.659e-8
Identity = 79/372 (21.24%), Postives = 151/372 (40.59%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+         T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 372

[Close]

BLAST of F-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q58DG6|FXL20_BOVIN (F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 3.659e-8
Identity = 79/372 (21.24%), Postives = 151/372 (40.59%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEM----ASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLA--QIRAIDLSYTPSLTETPV 1360
            R  ++ +    +   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+         T      L+    +L++L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G  ++  E  +          I AH P L  +NL     + D  +  +   C  L+++  + C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ S L  + +    L+ L++ HC+  TD  + R + NG  A  Q+  I+L   P +T+  +
Sbjct:   12 RFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRGCGGLKALFLKGCTQLEDEALKY---------IGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGNGACAHDQLEVIELDNCPLITDASL 372

[Close]

BLAST of F-box domain-containing protein vs. UniProt/SwissProt
Match: sp|Q32PG9|FXL12_BOVIN (F-box/LRR-repeat protein 12 OS=Bos taurus OX=9913 GN=FBXL12 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.404e-6
Identity = 39/136 (28.68%), Postives = 62/136 (45.59%), Query Frame = 2

Query:  362 TFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDL--------ITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYL 745
            TF +L D ++L+IFSYL  RD  +I+ VC  W ++  D  LW++++L      L     +V   +L     S L  + M   L        ++  ++  L  + P LK L L  +N         +TS P +L  L
Sbjct:    3 TFADLPDSVLLEIFSYLPVRDRIRISRVCHHWKKLVDDRWLWRHVDL-----TLYTMRPKVMWHLLRRYMASRLHSLRMGGYLFSGSQAPQLSPALMRALGQKCPNLKRLCLHVANL----SMVPITSLPCTLRTL 129

[Close]

BLAST of F-box domain-containing protein vs. TrEMBL
Match: H2KRS8 (F-box/LRR-repeat protein 7 OS=Clonorchis sinensis OX=79923 GN=FBXL7 PE=4 SV=1)

HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0
Identity = 336/512 (65.62%), Postives = 407/512 (79.49%), Query Frame = 2

Query:  287 DLANNARRCSVYPRNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            D+  + RR SV  R S++ +D        L DKL+L+I SYL Q +L  IA VC++W + A+D +LWQ LN+R +  GL + S +  L+++   +G+ L++I+++SDLIT+PVLEEL NR P L+ L LDFSNAMQLHDFN+L +FP SL +LCICLSDVIFMEGLMRKIY  LSSLEVLHLIGTFE ++EEEEEIYEVINISKIKAHTPNLRVINLYGI F++DSHVELLA NCIHLE VALNFCL VKGSS  +L+  C K+++L+++HCGL+D+YM+A  WEK+KI ELDITSTELS+ CLE+ + RI    YLAVGH DFF DK+L  + E G   ++RAIDLS+TPSL E  +  FL  YG  L G+ML GKASLAEYFWTNVI  L++++ICVLGAA GWF+KYNTRVHID+I+E FA HCP LE+LEIQWDPDTIRFSDKSRKFID IRLKCSRLK+ TLSDGKYYEMVK NFERA+  RVVRT T+Y TSIV+LL  Y+DL FN
Sbjct:    8 DVVRDMRRTSVMRRASVFNAD---FLITRLPDKLMLQILSYLNQSELCNIARVCKQWRRFAYDPSLWQSLNMRPEYGGLYVRSVDDLLNLIHHRSGAGLRHIDLSSDLITVPVLEELGNRCPVLRNLTLDFSNAMQLHDFNELAAFPTSLRWLCICLSDVIFMEGLMRKIYSCLSSLEVLHLIGTFEQATEEEEEIYEVINISKIKAHTPNLRVINLYGINFIEDSHVELLATNCIHLECVALNFCLNVKGSSFALLIANCTKVKTLLLEHCGLKDEYMMAAPWEKSKICELDITSTELSAECLENFIPRIPYFTYLAVGHSDFFNDKLLNHLCETGKFHKLRAIDLSFTPSLGEQSITNFLKTYGNNLEGLMLHGKASLAEYFWTNVISSLRSVKICVLGAAHGWFFKYNTRVHIDKILESFAAHCPNLEALEIQWDPDTIRFSDKSRKFIDRIRLKCSRLKSLTLSDGKYYEMVKGNFERANCPRVVRTNTTYNTSIVSLLEHYKDLRFN 516

[Close]

BLAST of F-box domain-containing protein vs. TrEMBL
Match: A0A075A8I1 (F-box domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_14565 PE=4 SV=1)

HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0
Identity = 336/512 (65.62%), Postives = 405/512 (79.10%), Query Frame = 2

Query:  287 DLANNARRCSVYPRNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            D+  + RR SV  R S++  D        L DKL+L+I SYL Q +L  IA VC++W + A+D +LWQ LN+R +  GL + S +  L+++   +G+ L++I+++SDLIT+PVLEEL NR P L+ L LDFSNAMQLHDFN+L +FP SL +LCICLSDVIFMEGLMRKIY  LSSLEVLHLIGTFE ++EEEEEIYEVINISKIKAHTPNLRVINLYGI F++DSHVELLA NCIHLE VALNFCL VKGSS  +L+  C K+++L+++HCGL+D+YM+A  WEK+KI ELDITSTELS+ CLE+ + RI    YLAVGH DFF DK+L  + E G   ++RAIDLS+TPSL E  +  FL  YG  L G+ML GKASLAEYFWTNVI  L++++ICVLGAA GWF+KYNTRVHID+I+E FA HCP LE+LEIQWDPDTIRFSDKSRKFID IRLKCSRLK+ TLSDGKYYEMVK NFERA   RVVRT T+Y TSIV+LL  Y+DL FN
Sbjct:    8 DVVRDMRRTSVMRRTSVFNVD---FLITRLPDKLMLQILSYLNQSELCNIARVCKQWRRFAYDPSLWQSLNMRPEYGGLYVRSVDDLLNLIHHRSGAGLRHIDLSSDLITVPVLEELGNRCPVLRNLTLDFSNAMQLHDFNELAAFPTSLRWLCICLSDVIFMEGLMRKIYSCLSSLEVLHLIGTFEQATEEEEEIYEVINISKIKAHTPNLRVINLYGINFIEDSHVELLATNCIHLECVALNFCLNVKGSSFSLLIANCTKVKTLLLEHCGLKDEYMMAAPWEKSKICELDITSTELSAECLENFIPRIPYFTYLAVGHSDFFNDKLLNHLCEAGKFHKLRAIDLSFTPSLGEQSITNFLKTYGNNLEGLMLHGKASLAEYFWTNVISSLRSVKICVLGAAHGWFFKYNTRVHIDKILESFAAHCPNLEALEIQWDPDTIRFSDKSRKFIDRIRLKCSRLKSLTLSDGKYYEMVKGNFERAHCPRVVRTNTTYNTSIVSLLEHYKDLRFN 516

[Close]

BLAST of F-box domain-containing protein vs. TrEMBL
Match: A0A4S2LWF1 (F-box domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005840 PE=4 SV=1)

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 335/512 (65.43%), Postives = 405/512 (79.10%), Query Frame = 2

Query:  287 DLANNARRCSVYPRNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            D+  + RR S+  R S++  D        L DKL+L+I SYL Q +L  IA VC++W + A+D +LWQ LN+R +  GL + S +  L+++   +G+ L++I+++SDLIT+PVLEEL NR P L+ L LDFSNAMQLHDFN+L +FP SL +LCICLSDVIFMEGLMRKIY  LSSLEVLHLIGTFE ++EEEEEIYEVINISKIKAHTPNLRVINLYGI F++DSHVELLA NCIHLE VALNFCL VKGSS  +L+  C K+++L+++HCGL+D+YM+A  WEK+KI ELDITSTELS+ CLE+ + RI    YLAVGH DFF DK+L  + E G   ++RAIDLS+TPSL E  +  FL  YG  L G+ML GKASLAEYFWTNVI  L++++ICVLGAA GWF+KYNTRVHID+I+E FA HCP LE+LEIQWDPDTIRFSDKSRKFID IRLKCSRLK+ TLSDGKYYEMVK NFERA   RVVRT T+Y TSIV+LL  Y+DL FN
Sbjct:    8 DVVRDMRRTSIMRRTSVFNVD---FLITRLPDKLMLQILSYLNQSELCSIARVCKQWRRFAYDPSLWQSLNMRPEYGGLYVRSVDDLLNLIHHRSGAGLRHIDLSSDLITVPVLEELGNRCPVLRNLTLDFSNAMQLHDFNELAAFPTSLRWLCICLSDVIFMEGLMRKIYSCLSSLEVLHLIGTFEQATEEEEEIYEVINISKIKAHTPNLRVINLYGINFIEDSHVELLATNCIHLECVALNFCLNVKGSSFALLIANCTKVKTLLLEHCGLKDEYMMAAPWEKSKICELDITSTELSAECLENFIPRIPYFTYLAVGHSDFFNDKLLNHLCEAGKFHKLRAIDLSFTPSLGEQSITNFLKTYGNNLEGLMLHGKASLAEYFWTNVISSLRSVKICVLGAAHGWFFKYNTRVHIDKILESFAAHCPNLEALEIQWDPDTIRFSDKSRKFIDRIRLKCSRLKSLTLSDGKYYEMVKGNFERAQCPRVVRTNTTYNTSIVSLLEHYKDLRFN 516

[Close]

BLAST of F-box domain-containing protein vs. TrEMBL
Match: A0A4S2LQK8 (F-box domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005840 PE=4 SV=1)

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 328/483 (67.91%), Postives = 393/483 (81.37%), Query Frame = 2

Query:  374 LQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            L DKL+L+I SYL Q +L  IA VC++W + A+D +LWQ LN+R +  GL + S +  L+++   +G+ L++I+++SDLIT+PVLEEL NR P L+ L LDFSNAMQLHDFN+L +FP SL +LCICLSDVIFMEGLMRKIY  LSSLEVLHLIGTFE ++EEEEEIYEVINISKIKAHTPNLRVINLYGI F++DSHVELLA NCIHLE VALNFCL VKGSS  +L+  C K+++L+++HCGL+D+YM+A  WEK+KI ELDITSTELS+ CLE+ + RI    YLAVGH DFF DK+L  + E G   ++RAIDLS+TPSL E  +  FL  YG  L G+ML GKASLAEYFWTNVI  L++++ICVLGAA GWF+KYNTRVHID+I+E FA HCP LE+LEIQWDPDTIRFSDKSRKFID IRLKCSRLK+ TLSDGKYYEMVK NFERA   RVVRT T+Y TSIV+LL  Y+DL FN
Sbjct:   11 LPDKLMLQILSYLNQSELCSIARVCKQWRRFAYDPSLWQSLNMRPEYGGLYVRSVDDLLNLIHHRSGAGLRHIDLSSDLITVPVLEELGNRCPVLRNLTLDFSNAMQLHDFNELAAFPTSLRWLCICLSDVIFMEGLMRKIYSCLSSLEVLHLIGTFEQATEEEEEIYEVINISKIKAHTPNLRVINLYGINFIEDSHVELLATNCIHLECVALNFCLNVKGSSFALLIANCTKVKTLLLEHCGLKDEYMMAAPWEKSKICELDITSTELSAECLENFIPRIPYFTYLAVGHSDFFNDKLLNHLCEAGKFHKLRAIDLSFTPSLGEQSITNFLKTYGNNLEGLMLHGKASLAEYFWTNVISSLRSVKICVLGAAHGWFFKYNTRVHIDKILESFAAHCPNLEALEIQWDPDTIRFSDKSRKFIDRIRLKCSRLKSLTLSDGKYYEMVKGNFERAQCPRVVRTNTTYNTSIVSLLEHYKDLRFN 493

[Close]

BLAST of F-box domain-containing protein vs. TrEMBL
Match: A0A094ZS91 (F-box/LRR-repeat protein 20 OS=Schistosoma haematobium OX=6185 GN=MS3_04217 PE=4 SV=1)

HSP 1 Score: 614.379 bits (1583), Expect = 0.000e+0
Identity = 324/512 (63.28%), Postives = 407/512 (79.49%), Query Frame = 2

Query:  287 DLANNARRCSVYPRNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            D+  + RR S + R S++  D        L +K++L+IFS+L+  +L  IA VC+ W ++A+D +LWQ LNLR +  G+ + S +  L+++   +GS L+ IE++SDL+TIPVLEEL NR P L+YL LDFSNAMQLHDFN+L SFP+S+ YLCICLSDVIFMEGLMRKIY  LS++E+LHLIGTFE+++EEEEEIYEVINISKIKAHTPNLRVINL+GI F++DSHVELLA+NCIHLE VALNFCL VKGSS  +L+  C K+ +L+++HCGL+D++M+AV WE + I ELDITSTELS+ CLE+ L RI    YLA GH DFFTD IL  + ++G   Q++AIDLS+TP+L E  +   L  +G QL G+ML GKA+LAEYFWT VI YL  I++CVLGA+ GWFYKYNTRVHID+I+E FA +CP LE+LEIQWDPDTIRFSDKSRKFID IR+KC RLK+ TLSDGKYYEMVK NFERA+  RVVRTTT+Y TSI++LL+ Y+DL FN
Sbjct:    8 DVVRDLRRASNFRRTSVFNED---FLITRLPEKIMLQIFSHLSHPELCNIARVCKMWRRLAYDHSLWQSLNLRPEYGGIFVRSIDELLNLIHHRSGSGLRCIELSSDLVTIPVLEELGNRCPNLRYLTLDFSNAMQLHDFNELASFPSSIKYLCICLSDVIFMEGLMRKIYSCLSAVEILHLIGTFELATEEEEEIYEVINISKIKAHTPNLRVINLFGINFIEDSHVELLASNCIHLECVALNFCLNVKGSSFTLLIANCKKLTTLLLEHCGLKDEFMMAVPWENSGICELDITSTELSAECLENFLTRIPYFTYLAAGHTDFFTDHILNTLCDSGKFKQVKAIDLSHTPALNEQSITNLLKLHGHQLHGLMLHGKATLAEYFWTTVIPYLGAIKVCVLGASHGWFYKYNTRVHIDKILESFAGYCPNLEALEIQWDPDTIRFSDKSRKFIDRIRIKCPRLKSLTLSDGKYYEMVKGNFERAECPRVVRTTTTYITSIISLLKRYKDLRFN 516

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Cavefish
Match: fbxl20 (F-box and leucine rich repeat protein 20 [Source:NCBI gene;Acc:103040563])

HSP 1 Score: 65.855 bits (159), Expect = 4.781e-11
Identity = 82/370 (22.16%), Postives = 152/370 (41.08%), Query Frame = 2

Query:  326 RNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTET 1354
            R  ++ ++   I   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S      IT      L+   P+LK+L L    ++       L+     L  L I   D +  +G+ + + +    L+ L L G             E   +  I AH P L  +NL     + D  +  +   C  L+++ ++ C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++ + L  + +    L+ L++ HC+  TD  + R + +G  A  R   I+L   P +T+ 
Sbjct:   12 RFEMFSNNDEAIINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIELLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCDQVTKDGI-QALVRCCPGLKGLFLKGC---------TQLEDEALKHIGAHCPELVTLNLQTCSQITDEGLITICRGCHRLQSLCVSGCANITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDATLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGSGPCAHDRLEVIELDNCPLITDA 370

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Cavefish
Match: fbxl20 (F-box and leucine rich repeat protein 20 [Source:NCBI gene;Acc:103040563])

HSP 1 Score: 58.5362 bits (140), Expect = 1.158e-8
Identity = 80/366 (21.86%), Postives = 147/366 (40.16%), Query Frame = 2

Query:  335 IYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMR-SLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTET 1354
            ++ ++   I   +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S      IT      L+   P+LK+L L    ++       L+     L  L I   D +  +G ++ + +    L+ L L G             E   +  I AH P L  +NL     + D  +  +   C  L+++ ++ C  +  + L  L + C ++R + +     +  K       EK  +EE      +++ + L  + +    L+ L++ HC+  TD  + R + +G  A  R   I+L   P +T+ 
Sbjct:    1 MFSNNDEAIINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIELLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCDQVTKDG-IQALVRCCPGLKGLFLKGC---------TQLEDEALKHIGAHCPELVTLNLQTCSQITDEGLITICRGCHRLQSLCVSGCANITDAILNALGQNCPRLRYTHVHTRKHIDIKCCNCHELEKMDLEE----CVQITDATLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGSGPCAHDRLEVIELDNCPLITDA 351

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003881.1 (pep scaffold:Pmarinus_7.0:GL477033:429527:460683:1 gene:ENSPMAG00000003530.1 transcript:ENSPMAT00000003881.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 57.7658 bits (138), Expect = 3.590e-9
Identity = 90/365 (24.66%), Postives = 154/365 (42.19%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---NLRQDCKGLAINST---------EVFLDILLPITGSTLKY-------IEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDK--YMVAVNW---EKAKIEEL----DITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIR--AIDLSYTPSLTETPV 1360
            +L  +L+L+IFS+L    L + A V R W  +A D + WQ +   N ++D +G  + +          ++ L   L +  S L+        IE  S      IT      L     +LK L L    A+  H    L+     L +L +   D +  +G+   + +   S++VL L G +         +   +++ +I  + P L  +NL     V D  V  +   C  L++++++ C  +  + L  L   C  +R L +  C  L D    M+A N    EK  +EE     D T  +LS  C      R+Q L   ++ HC+  TD  + R + NG  +  R   ++L   P +T+  +
Sbjct:   28 KLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQKIDLFNFQRDIEGRVVENISKRCGGFLRQLSLRGCLGVGDSALRTFSQNCRNIETLSLNGCTKITDNTCASLGKFCSKLKQLDLTSCTAITNHSLKALSDGCKGLEHLNVSWCDQVTEDGIT-ALARECHSMKVLLLKGCY---------MVNDVSLKQIGKYCPELVTLNLQNCSRVTDDGVITVCRGCHKLQSLSVSGCNALTDALLNALGHNCYHLRILEVAGCSQLSDTGFQMLARNCHDLEKMDLEECIQITDATLIQLSLHC-----PRLQVLMQ-SLSHCELITDDGI-RHLGNGACSHERLTVLELDNCPLVTDASL 375

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Nematostella
Match: EDO48582 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIW6])

HSP 1 Score: 120.553 bits (301), Expect = 3.670e-29
Identity = 104/461 (22.56%), Postives = 203/461 (44.03%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEG---LMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTE-LSSSCLEDILLRIQNLKYLAVGHCDF---FTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFS---DKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSN 1723
            +L D ++L+IF YL++RDL  +A VC++W +IA+D +LW+ ++L +      I+   + + I   +  +T   + +A   +T  V +ELA +  +LK L+   +     H    +  FP +L      L D+ +  G    MR++ +  +++  L L                   I  I     +LRV        ++D  +  ++ NC  L+++ LN C    G  LR ++E C  + SL+++   L D  +++VNW++ K++ELD+T    ++++ L  +L R+ N++Y  +  C F      +I   +      + +  +DL +   L     L+ L    P L  + +     +       ++ ++ N+++   G            +    +V    Q CP LE++ +      I F    D     +  +R KC  +K   L + +   +   N
Sbjct:    8 KLPDAVLLEIFLYLSRRDLGVVARVCKQWRRIAYDPSLWRTVDLNELLAWTTIDEATLLMLIKTRLASAT--ALNLAGCSVTPKVAKELAKKCRRLKSLVSFGTEVNTEHIRESIRDFPTTLE-----LMDLRYSWGDFSFMRRLPRHFTNVRYLGL-----------GSDAAECLIPDIFTKMRSLRVFECTDSEILNDDALLKISTNCPQLQSLCLNECKNFHGKHLRKVMENCPHITSLLIRFTKLNDVALMSVNWDRTKVQELDLTGCYFVTTTGLSSVLTRLPNVRYFKMNQCGFRHILHLRIYQEIKPTAKYSSLETLDLRWN-FLLSAECLEGLLRQAPNLRYLGVSHSPRIPPAVLAAMLKFVPNLKVLEFGPL------RKESLSESHLVPNLIQSCPSLEAVSL------INFKLIDDVDANMLQELRGKCKNIKEVKLCNPRIEHVAIGN 437

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Nematostella
Match: EDO43574 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RY44])

HSP 1 Score: 97.0561 bits (240), Expect = 2.235e-21
Identity = 96/370 (25.95%), Postives = 174/370 (47.03%), Query Frame = 2

Query:  365 FNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINS--TEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEG---LMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVI--NLYGIGFVDDSHVELLANNCI-------HLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTE-LSSSCLEDILLRIQ---NLKYLA---VGHCDFFTDKILGRMMEN---GNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGV 1402
             +EL + +ILKIFSYL++ DL K A VC++W++++ D +LW+ ++L+  CK L      TEV    L+    S +  ++++  ++T  +L  LAN  P+L+ L++   N  Q         FP  L +L     D+ +  G   + + I + L  ++ L +   F ++               +K    NL  +  +L  I  +D SH +L  +  +        L  + L  C  ++G +L +L+     + +LI+    + D  +  V WE+A +  L++     +SS  L  +  ++    NL+YL    VG     TDK L ++  +   G    + AI+ S   S+T+  +  F+  Y P+L+ V
Sbjct:   46 ISELDNPVILKIFSYLSRADLLKAAEVCKRWHELSFDRSLWRNVDLKGYCKTLMQGERITEVTEKYLV----SNVVALDLSGFMLTDSILGTLANNCPELRKLVVKSVN-FQTQGKEKEVLFPKHLKFL-----DMRYSHGSLQIYKAITRCLQDIKWLGICDGFILA---------------LKCDGSNLSDVLRDLRSIEKLDMSHCKLATDAVLAALSTSERLRVLNLRKCQNIQGEALEVLIPNLQSLETLILDGTSIDDACIAKVPWEQAGLRYLELGWCHFISSDGLSTLFPKVAQMVNLEYLGLCRVGDGRSLTDKNLIQLANHLNYGICTNLNAINFSMCDSITDFGLRAFVRKY-PKLSAV 389

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Nematostella
Match: EDO37350 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFZ7])

HSP 1 Score: 83.9593 bits (206), Expect = 3.940e-17
Identity = 69/300 (23.00%), Postives = 146/300 (48.67%), Query Frame = 2

Query:  362 TFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTE-LSSSCLEDILLRIQNLKYLAVGHCDF 1258
            +   L D ++L++FS+L QR L K+A+VC++W  IA D +LW+ ++L     GL        +   L   G  LK + + +  ++   +  L+    QL+   L   N +++     L   P     L +   D+    G + K+ ++  S+E L L  +            +    S +  +TP+L+ ++      V D  + ++A +C  LE + L  C  + G+SL  ++  C +++SL + +  + ++   + N++ +++ ELD++    +SS+ +  ++ +++++ YL V  C +
Sbjct:   25 SIERLPDSVLLQVFSFLCQRSLCKLALVCKRWRDIAFDGSLWRDVSL----GGLRHYYIRSLIGKPL---GRQLKILSLWTCTVSPENITALSKHCQQLEEFYLR-RNTIKMQKMRSLRR-PRFPRLLILDARDLQENAGFVMKMIRYTPSIEKLALDSSM-----------DGYFDSSVFENTPHLQALDCSRCLAVADKDLGVVAMSCPKLEYLTLVRCYGISGTSLPSIIRSCVRLKSLSLAYTSVTNEAFQSCNFQHSELRELDLSHCPGVSSTGVLSVVTKLKDMTYLNVNGCSY 304

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Nematostella
Match: EDO28471 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T6D4])

HSP 1 Score: 67.3958 bits (163), Expect = 7.783e-12
Identity = 72/295 (24.41%), Postives = 138/295 (46.78%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLR--QDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFND-LTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDIT-STELSSSCLEDILLRIQNLKYLAV 1243
            EL +  +L++F YL +  L ++A  C  W +IA+D +LW  ++LR  QD K   +  T++    + P+    L  + ++   ++  V   LA    +L+ L L+ S  ++   F D + SFP +L YL     D+    G          +L+ +  +G        +    +  N+ K+ +     +++       + D  V  LA   + LE++ L  C  + G SL +L+  C  + SL++    + D  +++V WE + I ++D++    L+   L  IL ++  L+YL +
Sbjct:  196 ELPESCLLRVFFYLDEAQLGRVARTCTTWRRIAYDCSLWTRVDLRRYQD-KIDELRLTKIIQSRMSPL----LYKLNLSGLTLSPRVFRLLAKECKKLRVLSLESSTFVE--QFEDAVNSFPRNLDYL-----DIRHTTGDKSAFKIIALTLQGVRCLG--LNDEIIKSSQDKSENLEKMFSGFSATKILEFSYCTKLSDDMVGHLAAFGLRLESLCLRRCNSIIGKSLPLLINSCTLLTSLVLDGTSIDDDALMSVPWENSIISDVDLSWCRHLTEVGLCAILPKLSRLRYLRI 476

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Nematostella
Match: EDO33222 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSV9])

HSP 1 Score: 53.1434 bits (126), Expect = 2.859e-7
Identity = 39/150 (26.00%), Postives = 77/150 (51.33%), Query Frame = 2

Query:  899 IKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDIT-STELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPS 1342
            I ++ P+L  +N+ G   + D  + ++A  C  LE + +  CL++  SSL  + + C K++ + MQ C  LQD      N  +  +  +D++  T+++  C++ I+     L+++++  C   TD  LG      N   ++ +DLS+  S
Sbjct:  354 IASNCPSLAHLNVCGCLAISDLSMLVVATCCTDLECLEIAECLRITHSSLNRIAQNCVKLKYIDMQVCSYLQDLDFRKDNSVQLAMSHIDLSYCTKINDDCVKHIVTECTQLEFISLAGCHRVTD--LGLKYIACNCPLLQYVDLSFRGS 501

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Medaka
Match: fbxl20 (F-box/LRR-repeat protein 20 [Source:NCBI gene;Acc:101160411])

HSP 1 Score: 64.6994 bits (156), Expect = 1.296e-10
Identity = 79/355 (22.25%), Postives = 147/355 (41.41%), Query Frame = 2

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQ--IRAIDLSYTPSLTET 1354
            +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S      IT      L+   P+LK+L L    ++       L+    SL  L I   D +  +G+ + + +    L+ L L G             E   + +I A+ P L  +NL     + D  +  +   C  L+++ ++ C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++   L  + +    L+ L++ HC+  TD  + R + +G  A   +  I+L   P +T+ 
Sbjct:   27 KLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIELLSLNGCTKITDSTCSSLSKFCPKLKHLDLASCTSITNLSLKALSEGCHSLEQLNISWCDQVTKDGI-QALVRSCPGLKGLFLKGC---------TQLEDEALKQIGAYCPELVTLNLQTCSQITDEGLITICRGCHRLQSLCVSGCANITDAILHALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDGTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGSGPCAHDCLEVIELDNCPLITDA 370

[Close]

Query:  371 ELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYL---------------NLRQDCKG----LAINSTEVFLDILLPITGSTLKYIEMAS----DLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCG-LQDKYMVAVNWEKAKIEELDITS-TELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQ--IRAIDLSYTPSLTET 1354
            +L  +L+L+IFS+L    L + A V R W  +A D + WQ +               N+ + C G    L++       D  L       + IE+ S      IT      L+   P+LK+L L    ++       L+    SL  L I   D +  +G+ + + +    L+ L L G             E   + +I A+ P L  +NL     + D  +  +   C  L+++ ++ C  +  + L  L + C ++R L +  C  L D     +     ++E++D+    +++   L  + +    L+ L++ HC+  TD  + R + +G  A   +  I+L   P +T+ 
Sbjct:   27 KLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIELLSLNGCTKITDSTCSSLSKFCPKLKHLDLASCTSITNLSLKALSEGCHSLEQLNISWCDQVTKDGI-QALVRSCPGLKGLFLKGC---------TQLEDEALKQIGAYCPELVTLNLQTCSQITDEGLITICRGCHRLQSLCVSGCANITDAILHALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDGTLIQLSIHCPRLQVLSLSHCELITDDGI-RHLGSGPCAHDCLEVIELDNCPLITDA 370

[Close]

BLAST of F-box domain-containing protein vs. Ensembl Medaka
Match: skp2 (S-phase kinase associated protein 2 [Source:NCBI gene;Acc:101156183])

HSP 1 Score: 54.6842 bits (130), Expect = 1.653e-7
Identity = 19/49 (38.78%), Postives = 40/49 (81.63%), Query Frame = 2

Query:  359 ITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLR 505
            I+++ L D+L+L+I+ YL  +DL ++++VC++W+++A D +LWQ ++L+
Sbjct:   91 ISWDHLPDELLLRIYFYLPLQDLLRVSLVCKRWHRLAFDESLWQSVDLQ 139

[Close]

BLAST of F-box domain-containing protein vs. Planmine SMEST
Match: SMESG000026800.1 (SMESG000026800.1)

HSP 1 Score: 1118.61 bits (2892), Expect = 0.000e+0
Identity = 577/578 (99.83%), Postives = 577/578 (99.83%), Query Frame = 2

Query:   89 MPINYWARSDEIGRDFTILVGFVNQYLTKKLNFTLHSSLGKDDEKFECTSFILALNIVRQMQNNFYDLANNARRCSVYPRNSIYPSDVTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            MPINYWARSDEIGRDFTILVGFVNQYLTKKLNFTLHSSLGKDDEKFECTSFILALNIVRQMQNNFYDLANNARRCSVYPRNSIYPSDVTYITFNEL DKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFEMSSEEEEEIYEVINISKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKVRVVRTTTSYTTSIVTLLRDYRDLMFN
Sbjct:    1 MPINYWARSDEIGRDFTILVGFVNQYLTKKLNFTLHSSLGKDDEKFECTSFILALNIVRQMQNNFYDLANNARRCSVYPRNSIYPSDVTYITFNELPDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFEMSSEEEEEIYEVINISKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKVRVVRTTTSYTTSIVTLLRDYRDLMFN 578

[Close]

BLAST of F-box domain-containing protein vs. Planmine SMEST
Match: SMESG000026800.1 (SMESG000026800.1)

HSP 1 Score: 937.176 bits (2421), Expect = 0.000e+0
Identity = 490/491 (99.80%), Postives = 490/491 (99.80%), Query Frame = 2

Query:  350 VTYITFNELQDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFXXXXXXXXXXXXXXXXXKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKXXXXXXXXXXXXXXXXLLRDYRDLMFN 1822
            VTYITFNEL DKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFEMSSEEEEEIYEVINISKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKVRVVRTTTSYTTSIVTLLRDYRDLMFN
Sbjct:   16 VTYITFNELPDKLILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINSTEVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNAMQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIGTFEMSSEEEEEIYEVINISKIKAHTPNLRVINLYGIGFVDDSHVELLANNCIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNWEKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMMENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYFWTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLEIQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERADKVRVVRTTTSYTTSIVTLLRDYRDLMFN 506

The following BLAST results are available for this feature:

BLAST of F-box domain-containing protein vs. Ensembl Human
BLAST of F-box domain-containing protein vs. Ensembl Celegans
BLAST of F-box domain-containing protein vs. Ensembl Fly
BLAST of F-box domain-containing protein vs. Ensembl Zebrafish
BLAST of F-box domain-containing protein vs. Ensembl Xenopus
BLAST of F-box domain-containing protein vs. Ensembl Mouse
BLAST of F-box domain-containing protein vs. UniProt/SwissProt
BLAST of F-box domain-containing protein vs. TrEMBL
BLAST of F-box domain-containing protein vs. Ensembl Cavefish
BLAST of F-box domain-containing protein vs. Ensembl Sea Lamprey
BLAST of F-box domain-containing protein vs. Ensembl Yeast
BLAST of F-box domain-containing protein vs. Ensembl Nematostella
BLAST of F-box domain-containing protein vs. Ensembl Medaka
BLAST of F-box domain-containing protein vs. Planmine SMEST

BLAST of F-box domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
FBXL20	6.716e-9	20.97	F-box and leucine rich repeat protein 20 [Source:H...	[more]
FBXL20	7.619e-9	21.24	F-box and leucine rich repeat protein 20 [Source:H...	[more]
FBXL20	7.619e-9	21.24	F-box and leucine rich repeat protein 20 [Source:H...	[more]
FBXL20	8.723e-9	21.81	F-box and leucine rich repeat protein 20 [Source:H...	[more]
SKP2	2.521e-7	28.33	S-phase kinase associated protein 2 [Source:HGNC S...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
T28B4.1	8.130e-135	42.71	pep chromosome:WBcel235:X:6592579:6596135:1 gene:W...	[more]
T28B4.1	1.283e-134	43.27	pep chromosome:WBcel235:X:6590192:6596135:1 gene:W...	[more]
T28B4.1	2.848e-134	43.27	pep chromosome:WBcel235:X:6588800:6596133:1 gene:W...	[more]
T28B4.1	2.848e-134	43.27	pep chromosome:WBcel235:X:6587898:6596135:1 gene:W...	[more]
fbxl-1	1.719e-10	22.81	Uncharacterized F-box/LRR-repeat protein C02F5.7 ...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CG2010	5.531e-154	47.76	gene:FBgn0039667 transcript:FBtr0333187	[more]
CG2010	5.531e-154	47.76	gene:FBgn0039667 transcript:FBtr0085427	[more]
CG2010	1.222e-153	47.01	gene:FBgn0039667 transcript:FBtr0085428	[more]
FBXO11	1.078e-6	42.31	gene:FBgn0037760 transcript:FBtr0334684	[more]
FBXO11	1.078e-6	42.31	gene:FBgn0037760 transcript:FBtr0082155	[more]

BLAST of F-box domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
fbxl20	8.916e-11	21.62	F-box and leucine-rich repeat protein 20 [Source:Z...	[more]
fbxl20	4.147e-8	21.67	F-box and leucine-rich repeat protein 20 [Source:Z...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
adcy3	9.588e-10	22.22	adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-10...	[more]
adcy3	2.019e-9	22.25	adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-10...	[more]
adcy3	2.777e-9	21.62	adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-10...	[more]
adcy3	3.050e-9	21.74	adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-10...	[more]
adcy3	7.215e-9	22.13	adenylate cyclase 3 [Source:Xenbase;Acc:XB-GENE-10...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Fbxl20	3.495e-9	21.51	F-box and leucine-rich repeat protein 20 [Source:M...	[more]
Skp2	3.713e-6	39.58	S-phase kinase-associated protein 2 (p45) [Source:...	[more]
Skp2	4.190e-6	39.58	S-phase kinase-associated protein 2 (p45) [Source:...	[more]
AC139209.1	4.510e-6	39.58	pep chromosome:GRCm38:CHR_MG4288_PATCH:9113664:913...	[more]
AC139209.1	4.510e-6	39.58	pep chromosome:GRCm38:CHR_MG4288_PATCH:9113664:913...	[more]

BLAST of F-box domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P34284\|FBXL_CAEEL	2.707e-9	22.81	F-box/LRR-repeat protein fbxl-1 OS=Caenorhabditis ...	[more]
sp\|Q9CZV8\|FXL20_MOUSE	2.445e-8	21.51	F-box/LRR-repeat protein 20 OS=Mus musculus OX=100...	[more]
sp\|Q96IG2\|FXL20_HUMAN	3.659e-8	21.24	F-box/LRR-repeat protein 20 OS=Homo sapiens OX=960...	[more]
sp\|Q58DG6\|FXL20_BOVIN	3.659e-8	21.24	F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 ...	[more]
sp\|Q32PG9\|FXL12_BOVIN	1.404e-6	28.68	F-box/LRR-repeat protein 12 OS=Bos taurus OX=9913 ...	[more]

BLAST of F-box domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
H2KRS8	0.000e+0	65.63	F-box/LRR-repeat protein 7 OS=Clonorchis sinensis ...	[more]
A0A075A8I1	0.000e+0	65.63	F-box domain-containing protein OS=Opisthorchis vi...	[more]
A0A4S2LWF1	0.000e+0	65.43	F-box domain-containing protein OS=Opisthorchis fe...	[more]
A0A4S2LQK8	0.000e+0	67.91	F-box domain-containing protein OS=Opisthorchis fe...	[more]
A0A094ZS91	0.000e+0	63.28	F-box/LRR-repeat protein 20 OS=Schistosoma haemato...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
fbxl20	4.781e-11	22.16	F-box and leucine rich repeat protein 20 [Source:N...	[more]
fbxl20	1.158e-8	21.86	F-box and leucine rich repeat protein 20 [Source:N...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000003881.1	3.590e-9	24.66	pep scaffold:Pmarinus_7.0:GL477033:429527:460683:1...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of F-box domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO48582	3.670e-29	22.56	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO43574	2.235e-21	25.95	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37350	3.940e-17	23.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28471	7.783e-12	24.41	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33222	2.859e-7	26.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of F-box domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3


Match Name	E-value	Identity	Description
fbxl20	1.296e-10	22.25	F-box/LRR-repeat protein 20 [Source:NCBI gene;Acc:...	[more]
fbxl20	1.296e-10	22.25	F-box/LRR-repeat protein 20 [Source:NCBI gene;Acc:...	[more]
skp2	1.653e-7	38.78	S-phase kinase associated protein 2 [Source:NCBI g...	[more]

BLAST of F-box domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2


Match Name	E-value	Identity	Description
SMESG000026800.1	0.000e+0	99.83	SMESG000026800.1	[more]
SMESG000026800.1	0.000e+0	99.80	SMESG000026800.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30008707 ID=SMED30008707|Name=F-box domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1880bp
GGTGAATCGAGCGGATGCTGCTTAATATGGGAATATAAATAAAATTCCCA
GTTGACATTGCACATGTGTACTTTTCCTGCTTCCTTAAATGCCAATAAAT
TACTGGGCGAGATCGGACGAGATTGGCCGAGATTTCACCATTCTCGTCGG
ATTTGTCAATCAATATTTAACTAAAAAATTAAATTTCACTCTCCATTCTT
CATTGGGAAAAGATGACGAGAAATTCGAATGCACCAGTTTTATTCTCGCG
TTAAATATCGTTCGACAAATGCAGAATAATTTCTACGATTTGGCAAATAA
TGCTCGGCGGTGCTCGGTATATCCGCGGAATTCCATATATCCTTCCGATG
TAACATATATTACCTTCAATGAGCTTCAGGACAAATTGATTCTAAAGATC
TTTTCATATCTAACTCAAAGGGATTTGTTTAAGATTGCAGTCGTTTGCCG
AAAATGGTATCAAATAGCTCACGATTCCACATTGTGGCAATATTTGAATT
TGCGACAAGACTGTAAGGGGTTAGCCATCAATTCTACAGAGGTATTCCTT
GATATTCTGCTTCCAATCACCGGCTCTACTCTCAAATACATTGAAATGGC
GAGTGACTTAATAACGATACCGGTTTTGGAGGAATTGGCTAATCGTAGTC
CACAACTCAAATATTTGATTTTGGATTTCAGTAATGCCATGCAACTCCAT
GACTTCAATGACTTGACGAGTTTTCCCGCGAGTCTTTATTATCTCTGCAT
CTGTTTAAGTGATGTCATATTTATGGAAGGTTTGATGCGAAAGATTTATC
AATTTTTATCTTCGTTGGAAGTTTTGCATCTAATCGGAACCTTTGAAATG
TCGAGTGAAGAAGAAGAAGAAATATATGAAGTAATCAACATTAGCAAGAT
CAAGGCTCATACCCCTAACCTAAGGGTTATAAATCTCTATGGGATAGGAT
TTGTTGACGATAGCCATGTTGAACTGCTCGCCAATAACTGCATCCACTTA
GAAACGGTTGCTCTTAATTTCTGTCTTAAAGTAAAGGGTTCTTCGTTGAG
AATTTTGCTAGAAAGATGTAACAAAATGAGGTCGCTAATAATGCAACATT
GTGGACTGCAGGACAAGTACATGGTGGCAGTGAACTGGGAAAAGGCTAAA
ATTGAAGAGCTCGATATCACTTCAACCGAATTGAGTAGTTCATGTCTAGA
GGACATTCTGCTGAGAATACAGAACCTGAAATATCTTGCTGTAGGCCATT
GTGACTTTTTCACGGATAAGATACTTGGCAGGATGATGGAAAACGGGAAC
CTGGCTCAGATCAGAGCTATTGATCTCAGCTACACTCCTAGTCTGACAGA
GACACCAGTCCTGAAATTCCTCTGTCATTATGGACCACAATTGACAGGAG
TGATGCTCCAAGGAAAAGCTTCCTTAGCCGAGTATTTCTGGACTAACGTC
ATTCATTATCTCAAAAATATTAGAATTTGCGTACTTGGTGCTGCTGACGG
TTGGTTTTACAAATACAACACCCGGGTTCACATAGATCAAATTGTTGAAG
GATTTGCCCAACATTGCCCGTTTTTGGAATCTTTAGAGATCCAATGGGAT
CCTGACACAATAAGGTTTAGTGATAAAAGTAGAAAATTTATCGATCATAT
AAGATTGAAATGTTCACGGCTTAAAACTTACACGTTAAGCGATGGAAAAT
ATTATGAAATGGTAAAATCAAATTTCGAAAGGGCAGACAAAGTTCGGGTG
GTGCGAACAACGACGAGTTATACAACGAGTATTGTAACCCTTTTGCGAGA
TTACCGGGACCTGATGTTCAATTGAAAGGATCTTAAGTAGCAATATTTAC
ATTTGTATCTAGTTCAATATTTAATAAATT

protein sequence of SMED30008707-orf-1

>SMED30008707-orf-1 ID=SMED30008707-orf-1|Name=SMED30008707-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=579bp
MPINYWARSDEIGRDFTILVGFVNQYLTKKLNFTLHSSLGKDDEKFECTS
FILALNIVRQMQNNFYDLANNARRCSVYPRNSIYPSDVTYITFNELQDKL
ILKIFSYLTQRDLFKIAVVCRKWYQIAHDSTLWQYLNLRQDCKGLAINST
EVFLDILLPITGSTLKYIEMASDLITIPVLEELANRSPQLKYLILDFSNA
MQLHDFNDLTSFPASLYYLCICLSDVIFMEGLMRKIYQFLSSLEVLHLIG
TFEMSSEEEEEIYEVINISKIKAHTPNLRVINLYGIGFVDDSHVELLANN
CIHLETVALNFCLKVKGSSLRILLERCNKMRSLIMQHCGLQDKYMVAVNW
EKAKIEELDITSTELSSSCLEDILLRIQNLKYLAVGHCDFFTDKILGRMM
ENGNLAQIRAIDLSYTPSLTETPVLKFLCHYGPQLTGVMLQGKASLAEYF
WTNVIHYLKNIRICVLGAADGWFYKYNTRVHIDQIVEGFAQHCPFLESLE
IQWDPDTIRFSDKSRKFIDHIRLKCSRLKTYTLSDGKYYEMVKSNFERAD
KVRVVRTTTSYTTSIVTLLRDYRDLMFN*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0019005	SCF ubiquitin ligase complex
GO:0005575	cellular_component
GO:0005737	cytoplasm

Vocabulary: **biological process**
Term	Definition
GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0001662	behavioral fear response
GO:0016567	protein ubiquitination

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell

Vocabulary: **INTERPRO**
Term	Definition
IPR039940	FBXO33
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom
IPR032675	LRR_dom_sf

Vocabulary: **molecular function**
Term	Definition
GO:0005515	protein binding
GO:0004842	ubiquitin-protein transferase activity

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 96..136 e-value: 5.3E-10 score: 49.2
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 94..138 e-value: 2.7E-14 score: 52.8
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 90..136 score: 16.518
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 87..350 e-value: 1.7E-34 score: 121.3
None	No IPR available	PANTHER	PTHR20933:SF4		coord: 86..578
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 272..506
IPR039940	F-box only protein 33	PANTHER	PTHR20933	F-BOX ONLY PROTEIN 33	coord: 86..578
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 90..139

Main menu

F-box domain-containing protein

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Owlery

blazegraph-runner