MyoD-like protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryogenesis
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Expression Details MyoD-like protein ( myoD ) is expressed during Stage 5, Stage 6, Stage 7 and Stage 8 in the musculature system, muscle progenitor cell and obsolete body wall musculature compartment
Click to see image symbols and abbreviations
Muscle progenitors arise in the piwi-1+ blastomere population during S5. SPIM reconstructed S5 embryo costained with piwi-1 and VAL-like (both in red) and myoD (green). Muscle progenitors, coexpressing piwi-1 and myoD, are dispersed in the embryonic wall. As muscle progenitors differentiate, they are predicted to downregulate piwi-1 and retain expression of myoD. VAL-like is expressed the temporary embryonic pharynx (at bottom) and is not detected in piwi-1+ blastomeres Anatomical Expression
PAGE et. al., 2020SMED30008639 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 60Note: Hover over icons to view figure legend
Homology
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYOD1 (myogenic differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7611]) HSP 1 Score: 88.9669 bits (219), Expect = 7.647e-19 Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 3
Query: 903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
++EHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIE L+ LL
Sbjct: 77 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALL 164
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYF5 (myogenic factor 5 [Source:HGNC Symbol;Acc:HGNC:7565]) HSP 1 Score: 87.8113 bits (216), Expect = 8.390e-19 Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 3
Query: 900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTT 1442
+++EHV P H G CL+WACKACK+K+ +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+EL L+E+ +N + + P + +D N + +T S D+ +Y ++ S+LD LS+IVD+I+++
Sbjct: 50 DEDEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQEL-------------LREQVENYYSLPGQSCSEPTSPTSNCSDGMPECNS--PVWSRKSSTFDSIYCPDV-SNVYATDKNSLSSLDCLSNIVDRITSS 217
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYF6 (myogenic factor 6 [Source:HGNC Symbol;Acc:HGNC:7566]) HSP 1 Score: 82.0333 bits (201), Expect = 5.547e-17 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 3
Query: 906 EEHVLVPGSH------GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EEHVL P GQCL+WACK CK+K+ DRRKAAT+RERRRL+K+NEAFE LKRRT NPNQR+PKVEIL++AI YIE L++LL+ +
Sbjct: 59 EEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRL 151
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYOG (myogenin [Source:HGNC Symbol;Acc:HGNC:7612]) HSP 1 Score: 75.485 bits (184), Expect = 7.195e-15 Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 3
Query: 936 GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
GQCL WACK CK+K+V VDRR+AAT+RE+RRL+KVNEAFE LKR T NPNQR+PKVEIL++AI YIE L+ LL+S+
Sbjct: 63 GQCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980]) HSP 1 Score: 70.0922 bits (170), Expect = 6.384e-13 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
VNEAFE +K+RT NPNQR+PKVEIL++AIDYI +LE +L GK+
Sbjct: 171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980]) HSP 1 Score: 70.0922 bits (170), Expect = 6.384e-13 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
VNEAFE +K+RT NPNQR+PKVEIL++AIDYI +LE +L GK+
Sbjct: 171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980]) HSP 1 Score: 69.707 bits (169), Expect = 8.245e-13 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
VNEAFE +K+RT NPNQR+PKVEIL++AIDYI +LE +L GK+
Sbjct: 167 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 212
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980]) HSP 1 Score: 69.707 bits (169), Expect = 8.617e-13 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
VNEAFE +K+RT NPNQR+PKVEIL++AIDYI +LE +L GK+
Sbjct: 171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980]) HSP 1 Score: 69.707 bits (169), Expect = 8.617e-13 Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
VNEAFE +K+RT NPNQR+PKVEIL++AIDYI +LE +L GK+
Sbjct: 171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
BLAST of MyoD-like protein vs. Ensembl Fly
Match: nau (gene:FBgn0002922 transcript:FBtr0301445) HSP 1 Score: 91.2781 bits (225), Expect = 8.880e-20 Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 3
Query: 906 EEHVLVP------GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
EEHVL P S CL WACKACKKK+V VDRRKAATMRERRRLRKVNEAFE LKRRTS NPNQR+PKVEIL+NAI+YIESLE+LL
Sbjct: 127 EEHVLAPLVCSSAQSSRPCLTWACKACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVEILRNAIEYIESLEDLL 216
BLAST of MyoD-like protein vs. Ensembl Fly
Match: nau (gene:FBgn0002922 transcript:FBtr0084472) HSP 1 Score: 90.8929 bits (224), Expect = 9.998e-20 Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 3
Query: 906 EEHVLVP------GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
EEHVL P S CL WACKACKKK+V VDRRKAATMRERRRLRKVNEAFE LKRRTS NPNQR+PKVEIL+NAI+YIESLE+LL
Sbjct: 127 EEHVLAPLVCSSAQSSRPCLTWACKACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVEILRNAIEYIESLEDLL 216
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:30513]) HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-19 Identity = 66/90 (73.33%), Postives = 75/90 (83.33%), Query Frame = 3
Query: 903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNS 1163
++EHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL S
Sbjct: 52 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSTNPNQRLPKVEILRNAISYIESLQALLRS 141
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myf5 (myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]) HSP 1 Score: 84.3445 bits (207), Expect = 6.212e-18 Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 3
Query: 840 TSSNSSPQKLSLAIEQHLCPNKE-EHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
++ SSP+ L L ++E EHV PG+ G CL WACKACK+K VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL+ELL
Sbjct: 13 STCASSPEDLEFGASGELTGSEEDEHVRAPGAPHQPGHCLQWACKACKRKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQELL 122
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myf5 (myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]) HSP 1 Score: 84.3445 bits (207), Expect = 6.212e-18 Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 3
Query: 840 TSSNSSPQKLSLAIEQHLCPNKE-EHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
++ SSP+ L L ++E EHV PG+ G CL WACKACK+K VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL+ELL
Sbjct: 13 STCASSPEDLEFGASGELTGSEEDEHVRAPGAPHQPGHCLQWACKACKRKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQELL 122
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:404208]) HSP 1 Score: 79.7221 bits (195), Expect = 2.028e-16 Identity = 58/92 (63.04%), Postives = 75/92 (81.52%), Query Frame = 3
Query: 906 EEHVLVPGS-----HGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EEHVL P GQCL+WACK CK+K+ DRRKAAT+RERRRL+K+NEAF+ LK++T NPNQR+PKVEIL++AI+YIE L++LL+S+
Sbjct: 59 EEHVLAPPGLQAHCEGQCLMWACKICKRKSAPTDRRKAATLRERRRLKKINEAFDALKKKTVPNPNQRLPKVEILRSAINYIEKLQDLLHSL 150
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myog (myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265]) HSP 1 Score: 73.9442 bits (180), Expect = 7.915e-15 Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 3
Query: 882 EQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EQ CP GQCL WACK CK+K+V +DRRKAAT+RE+RRL+KVNEAFE LKR T NPNQR+PKVEIL++AI YIE L+ L++S+
Sbjct: 78 EQQHCP------------GQCLPWACKVCKRKSVTMDRRKAATLREKRRLKKVNEAFEALKRSTLMNPNQRLPKVEILRSAIQYIERLQALVSSL 160
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: dbndd1 (dysbindin (dystrobrevin binding protein 1) domain containing 1 [Source:Xenbase;Acc:XB-GENE-983679]) HSP 1 Score: 89.7373 bits (221), Expect = 1.690e-19 Identity = 89/190 (46.84%), Postives = 114/190 (60.00%), Query Frame = 3
Query: 900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLP------TTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTT 1442
+++EHV P H G CL+WACKACK+K+ +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL++LL E E + P S T P + +D T C P ++ + SDL Q + S L S+LD LSSIVD+IS++
Sbjct: 50 DEDEHVRAPIGHHQAGNCLMWACKACKRKSSTMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIKYIESLQDLLQ----------EQVENYYSLPGQSCTEPGS---PTSSCSDGM--------TDCSSPQWSGRNSSFDNVYCSDL-QTSFSSTKLTLSSLDCLSSIVDRISSS 217
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: cuzd1.2 (CUB and zona pellucida-like domains 1, gene 2 [Source:Xenbase;Acc:XB-GENE-5998436]) HSP 1 Score: 91.2781 bits (225), Expect = 6.224e-19 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 3
Query: 900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
N++EHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL
Sbjct: 62 NEDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSTNPNQRLPKVEILRNAIRYIESLQSLLR 151
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:549914]) HSP 1 Score: 85.1149 bits (209), Expect = 5.091e-18 Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 3
Query: 900 NKEEHVLVPGS-----HGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
++EEHVL P GQCL+WACK CK+K+ DRRKAAT+RERRRL+K+NEAFE LKRRT NPNQR+PKVEIL++AI+YIE L++LL+S+
Sbjct: 56 SEEEHVLAPPGLQPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAINYIERLQDLLHSL 149
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: myog (myogenin (myogenic factor 4) [Source:NCBI gene;Acc:549479]) HSP 1 Score: 75.485 bits (184), Expect = 9.369e-15 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 3
Query: 936 GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGK 1172
GQCL WACK CK+KTV +DRR+AAT+RE+RRL+KVNEAFE LKR T NPNQR+PKVEIL++AI YIE L+ LL S+ +
Sbjct: 74 GQCLPWACKVCKRKTVSMDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQTLLASLNQ 152
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myod1 (myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275]) HSP 1 Score: 93.5893 bits (231), Expect = 1.756e-20 Identity = 87/188 (46.28%), Postives = 106/188 (56.38%), Query Frame = 3
Query: 903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAG---KQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKS---STLDQLSSIVDKIST 1439
++EHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIE L+ LL P P +G P + +D + P P + Y + + +S KS S+LD LSSIV++IST
Sbjct: 77 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAFYAPGPLPPGRGSEHYSGDSDASSPRSNCSDGMMDYSGPPSG----PRRQNGYDTAYYSEAARESRPGKSAAVSSLDCLSSIVERIST 260
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myf5 (myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]) HSP 1 Score: 88.5817 bits (218), Expect = 3.016e-19 Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 3
Query: 900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
+ EEHV P H G CL+WACKACK+K+ +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+ELL
Sbjct: 50 DDEEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQELL 138
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myf6 (myogenic factor 6 [Source:MGI Symbol;Acc:MGI:97253]) HSP 1 Score: 82.4185 bits (202), Expect = 2.605e-17 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 3
Query: 906 EEHVLVPGSH------GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EEHVL P GQCL+WACK CK+K+ DRRKAAT+RERRRL+K+NEAFE LKRRT NPNQR+PKVEIL++AI YIE L++LL+ +
Sbjct: 59 EEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRL 151
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myog (myogenin [Source:MGI Symbol;Acc:MGI:97276]) HSP 1 Score: 75.0998 bits (183), Expect = 6.443e-15 Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 3
Query: 936 GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
GQCL WACK CK+K+V VDRR+AAT+RE+RRL+KVNEAFE LKR T NPNQR+PKVEIL++AI YIE L+ LL+S+
Sbjct: 63 GQCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|Q00492|SUM1_LYTVA (Transcription factor SUM-1 OS=Lytechinus variegatus OX=7654 GN=SUM-1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.807e-21 Identity = 66/87 (75.86%), Postives = 73/87 (83.91%), Query Frame = 3
Query: 909 EHVLVPGSHGQ----CLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
EHVL PG HGQ CL+WACKACK+K V VD+RKAAT+RERRRLRKVNEAFE LKR T NPNQR+PKVEIL+NAI+YIE LE LL
Sbjct: 81 EHVLAPGFHGQGERRCLMWACKACKRKNVAVDKRKAATLRERRRLRKVNEAFEALKRHTCANPNQRLPKVEILRNAIEYIEKLERLL 167
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|P16075|MYOD1_CHICK (Myoblast determination protein 1 homolog OS=Gallus gallus OX=9031 GN=MYOD1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 8.499e-21 Identity = 91/192 (47.40%), Postives = 113/192 (58.85%), Query Frame = 3
Query: 897 PNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV--GKLPATVGELKERRKNNPE-NSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTI 1454
P +EEHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL P E ++P N + P + ++ Y Y S D + +S+++ S+LD LSSIV++IST N+T
Sbjct: 66 PTEEEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSTNPNQRLPKVEILRNAIRYIESLQALLREQEDAYYPVLEHYSGESDASSPRSNCSDGMMEYSGPPCSSRRRNSYDSSY-------------YTESPNDPKHGKSSVV--SSLDCLSSIVERISTDNSTC 242
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|Q08856|MYF5_CHICK (Myogenic factor 5 OS=Gallus gallus OX=9031 GN=MYF5 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.498e-20 Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 3
Query: 894 CPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
CP +EEHV P H G CL+WACKACK+K+ +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+ELL
Sbjct: 50 CPEEEEHVRAPSGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTANPNQRLPKVEILRNAIRYIESLQELLR 141
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|P34061|MYF5_COTJA (Myogenic factor 5 (Fragment) OS=Coturnix japonica OX=93934 GN=MYF5 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.684e-20 Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 3
Query: 894 CPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
CP +EEH+ P H G CL+WACKACK+K+ +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+ELL
Sbjct: 38 CPEEEEHIRAPSGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTANPNQRLPKVEILRNAIRYIESLQELLR 129
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|Q91154|MYF5_NOTVI (Myogenic factor 5 OS=Notophthalmus viridescens OX=8316 GN=MYF-5 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.958e-20 Identity = 90/186 (48.39%), Postives = 117/186 (62.90%), Query Frame = 3
Query: 894 CPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKS-STLDQLSSIVDKIST 1439
C ++EEHV P H G CLLWACKACK+K+ +DRRKAATMRERRRL+KVN AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+EL L+E+ +N + PL+ +D AE P + + +Y SD+ +Y ++ L + S+LD LSSIVD+IS+
Sbjct: 48 CSDEEEHVRAPSGHHQAGHCLLWACKACKRKSSTMDRRKAATMRERRRLKKVNSAFETLKRCTTANPNQRLPKVEILRNAISYIESLQEL-------------LREQVENYYTLPGQRCSEPGSPLSNCSDGM-AECNSPAWSRRNGSFDSAY-CSDI-PTMYPTDKLSTLSSLDCLSSIVDRISS 217
BLAST of MyoD-like protein vs. TrEMBL
Match: Q8MWP6 (MyoD-like protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 774.622 bits (1999), Expect = 0.000e+0 Identity = 465/466 (99.79%), Postives = 466/466 (100.00%), Query Frame = 3
Query: 93 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 1490
MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASD+DQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS
Sbjct: 1 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDIDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 466
BLAST of MyoD-like protein vs. TrEMBL
Match: U5YTB0 (MyoD protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=myoD PE=2 SV=1) HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0 Identity = 406/408 (99.51%), Postives = 407/408 (99.75%), Query Frame = 3
Query: 111 FPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTR 1334
FPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQ+INDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV KLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTR
Sbjct: 1 FPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQAINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVRKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTR 408
BLAST of MyoD-like protein vs. TrEMBL
Match: G1EN33 (Myogenic determinant factor OS=Dugesia japonica OX=6161 GN=MDF PE=2 SV=1) HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0 Identity = 404/507 (79.68%), Postives = 440/507 (86.79%), Query Frame = 3
Query: 93 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYS-------PTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDK--QKAENKYPETICKLPTTRKSYVASDLDQQ-IYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS*IHNKTQQILY*PINFVLNSFALIHIVHF 1577
MIHSGSFPGSTCPI+YDYSGPYSAGLEAAPFLVNQ CPY TN MPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKI+QKLPTT SKT+PSTLVSTSSNS+SN+E S SSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSP FAL+QYD++ ++QPSMTDLYHSSLAASS LNLNYSQHKSRHLSED GSC D Q+Q SNN N+ + PTTADFGSPKALSSSSQSINDGRQPTSS+SSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPA++GELK+RRKNN EN+R+ I GKQKP NKINDK QK EN +CK+ + RKSY+AS+LD Q +YQ+NMLKSSTLDQLSSIVDKIST N+T+ D+S++ KPE N + Y + LN+ ALI+IV+F
Sbjct: 1 MIHSGSFPGSTCPISYDYSGPYSAGLEAAPFLVNQNCPYTGSTNPMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIDQKLPTTVSKTSPSTLVSTSSNSLSNAEFNSTRSSSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPSFALRQYDSSSSTQPSMTDLYHSSLAASSTLNLNYSQHKSRHLSEDTGSCPDQQNQTNYSNNTTTNNSNNHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSHSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPASMGELKDRRKNNTENTRSTITGKQKPSNKINDKIIQKTEN-----LCKMTSNRKSYIASELDHQVVYQANMLKSSTLDQLSSIVDKISTNNSTLLDNSVETKPEKK--LNLWNYLFY--LFHFLNTPALINIVNF 498
BLAST of MyoD-like protein vs. TrEMBL
Match: A0A158QDV4 (BHLH domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS3801 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 7.106e-26 Identity = 96/170 (56.47%), Postives = 110/170 (64.71%), Query Frame = 3
Query: 807 SSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL--------PATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAE 1292
SS +++ R P S S + ++H +KEEHVL PGSHGQCLLWACKACKKKT+ VDRRKAATMRERRRLRKVNEAFETLKRRT NPNQRMPKVEIL+ AIDYIE+LEE+L+ G L P T G L P + + P NKIN A
Sbjct: 298 SSLGMSEDRSPISMGDSGDDTCSSDDEHGPGSKEEHVLAPGSHGQCLLWACKACKKKTMQVDRRKAATMRERRRLRKVNEAFETLKRRTCSNPNQRMPKVEILRTAIDYIENLEEMLHRNGVLLGASPTVTPPTAGNLLRSAGRYPSTNPST------PSNKINSVDGAR 461
BLAST of MyoD-like protein vs. TrEMBL
Match: A0A419Q881 (Transcription factor SUM-1 OS=Clonorchis sinensis OX=79923 GN=SUM-1 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.192e-25 Identity = 81/98 (82.65%), Postives = 86/98 (87.76%), Query Frame = 3
Query: 903 KEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGEL 1196
KEEHV+VPGSHGQCLLWACKACKKKT+ VDRRKAATMRERRRLRKVNEAFETLKRRT NPNQRMPKVEIL+NAIDYIE+LEE+L G LP L
Sbjct: 598 KEEHVIVPGSHGQCLLWACKACKKKTMQVDRRKAATMRERRRLRKVNEAFETLKRRTCANPNQRMPKVEILRNAIDYIENLEEMLQHNGVLPIGTSPL 695
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:103033512]) HSP 1 Score: 94.7449 bits (234), Expect = 2.298e-21 Identity = 85/182 (46.70%), Postives = 109/182 (59.89%), Query Frame = 3
Query: 903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKIST 1439
++EHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL S V + + ++ + R+ + N ++ + N Y SY + + S S+LD LSSIV++IST
Sbjct: 52 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRSQEDSYYPVLD-QYSGDSDASSPRSNCSDGMMDFNGLSCPSRRRNSY----------DSSYFNESQNVDVRSSKSTVVSSLDCLSSIVERIST 222
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:103033512]) HSP 1 Score: 92.4337 bits (228), Expect = 1.683e-20 Identity = 85/182 (46.70%), Postives = 113/182 (62.09%), Query Frame = 3
Query: 903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKIST 1439
++EHV P H G+CLLWACKACK+KT + DRRKAATMRERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL S V + + ++ + R+ + N ++ + N Y + + S D + +S ++ S+LD LSSIV++IST
Sbjct: 55 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRSQEDSYYPVLD-QYSGDSDASSPRSNCSDGMMDFNGLSCPSRRRNSYDSSY---------FNESQNDVRSSKSTVV--SSLDCLSSIVERIST 224
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myf5 (myogenic factor 5 [Source:NCBI gene;Acc:103046186]) HSP 1 Score: 79.7221 bits (195), Expect = 1.739e-16 Identity = 66/108 (61.11%), Postives = 79/108 (73.15%), Query Frame = 3
Query: 849 NSSPQKLSLAIEQHLCPNKE-EHVLVP-GSH--GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
SSP+ L L ++E EH+ P G H G CL WACKACK+K VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL++LL
Sbjct: 12 TSSPEDLDFGPSGELTGSEEDEHIRAPDGLHQPGHCLQWACKACKRKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQDLLR 119
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myog (myogenin [Source:NCBI gene;Acc:103037490]) HSP 1 Score: 74.7146 bits (182), Expect = 1.299e-14 Identity = 57/95 (60.00%), Postives = 71/95 (74.74%), Query Frame = 3
Query: 882 EQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EQ CP GQCL WACK CK+K+V +DRR+AAT+RE+RRL+KVNEAFE LKR T NPNQR+PKVEIL++AI YIE L+ L++S+
Sbjct: 79 EQQHCP------------GQCLPWACKVCKRKSVTMDRRRAATLREKRRLKKVNEAFEALKRSTLMNPNQRLPKVEILRSAIQYIEKLQALVSSL 161
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:404208]) HSP 1 Score: 74.3294 bits (181), Expect = 1.326e-14 Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 3
Query: 906 EEHVLVP-----GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EEHV P G CL+WACK CK+K DRRKAAT+RERRRL+K+NEAFE LK++T NPNQR+PKVEIL++AI+YIE L++LL+S+
Sbjct: 62 EEHVPAPPGLQAHCEGHCLIWACKICKRKCAPNDRRKAATLRERRRLKKINEAFEALKKKTVPNPNQRLPKVEILRSAINYIEKLQDLLHSL 153
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:101171160]) HSP 1 Score: 90.1225 bits (222), Expect = 7.271e-20 Identity = 84/187 (44.92%), Postives = 111/187 (59.36%), Query Frame = 3
Query: 906 EEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENS-RTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTI 1454
+EHV P H G+CLLWACKACK+KT + DRRKAAT+RERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL + G+ L+ ++ +S R+ + N + + Y SY + L+ S+LD LSSIV++IST ++ +
Sbjct: 41 DEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATLRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRA-GQEDGFYPVLEHYSGDSDASSPRSNCSDGMTDFNGPRCQTTQKGSY---------DGGSYFSEALNGGHRNDRSSVVSSLDCLSSIVERISTDSSCL 217
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:101171160]) HSP 1 Score: 89.7373 bits (221), Expect = 1.656e-19 Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query: 873 LAIEQHLCPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNS 1163
L + Q +EHV P H G+CLLWACKACK+KT + DRRKAAT+RERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL +
Sbjct: 67 LHVHQRAEVEDDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATLRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRA 166
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myf5 (myogenic factor 5 [Source:NCBI gene;Acc:101161281]) HSP 1 Score: 85.5001 bits (210), Expect = 1.732e-18 Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 3
Query: 855 SPQKLSLAIEQHLCPNKE-EHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNS-VGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASD-LDQQIYQSNMLKSSTLDQLSSIVDKISTTNTT 1451
SP L L ++E EHV VPG+ G CL WACKACK+K+ VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL+ELL V GE + + +AG P+ Q+ Y ++ SY ++ LD + +S+L+ LSSIVD++S+ ++
Sbjct: 18 SPDDLEFGSSLELTGSEEDEHVRVPGAPHQPGHCLQWACKACKRKSSFVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQELLREQVENFYGLPGESSSEPGSPLSSCSDGMAGGSSPV-----WQQLNANY--------SSSYSYTKNESLDNKT-----AGASSLECLSSIVDRLSSVESS 204
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: ENSORLT00000036191.1 (myoblast determination protein 1 homolog 1-like [Source:NCBI gene;Acc:105357454]) HSP 1 Score: 85.1149 bits (209), Expect = 2.605e-18 Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 3
Query: 903 KEEHVLVPGS---HGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
+++HV PG G CLLWACKACK+KT H DRRKAATMRERRRL KVN AFETLKR T NP+QR+PKVEIL+NAI YIESL+ LL
Sbjct: 59 EDQHVRAPGGPHQAGHCLLWACKACKRKTTHADRRKAATMRERRRLSKVNNAFETLKRCTVSNPSQRLPKVEILRNAISYIESLQALL 146
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:105353543]) HSP 1 Score: 80.4925 bits (197), Expect = 1.101e-16 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 3
Query: 906 EEHVLVP-----GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
EEHVL P GQCL+WACK CKKK+ DRRKAAT+RERRRL+K+NEAF+ LKR+T NPNQR+PKVEIL++AI YIE L++LL ++
Sbjct: 78 EEHVLAPPGLQAHCEGQCLMWACKICKKKSAPTDRRKAATLRERRRLKKINEAFDALKRKTVANPNQRLPKVEILRSAISYIERLQDLLQTL 169
BLAST of MyoD-like protein vs. Planmine SMEST
Match: SMESG000034317.1 (SMESG000034317.1) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 3
Query: 93 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 1490
MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKP NKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS
Sbjct: 1 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPPNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 466 The following BLAST results are available for this feature:
BLAST of MyoD-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 4
BLAST of MyoD-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of MyoD-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of MyoD-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 4
BLAST of MyoD-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of MyoD-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of MyoD-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of MyoD-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of MyoD-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of MyoD-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of MyoD-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of MyoD-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of MyoD-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008639 ID=SMED30008639|Name=MyoD-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1606bpback to top protein sequence of SMED30008639-orf-1 >SMED30008639-orf-1 ID=SMED30008639-orf-1|Name=SMED30008639-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=467bp MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLback to top Aliases
The feature 'MyoD-like protein' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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