MyoD-like protein

Overview
NameMyoD-like protein (AAN03696.1)
Smed IDSMED30008639
Length (bp)1606
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of MyoD-like protein (SMED30008639) t-SNE clustered cells

Violin plots show distribution of expression levels for MyoD-like protein (SMED30008639) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of MyoD-like protein (SMED30008639) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for MyoD-like protein (SMED30008639) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryogenesis

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Expression Details

Click to see image symbols and abbreviations
Abbreviation or symbolDefinition
Ooral hemisphere
Aaboral hemisphere
Ddorsal
Vventral
Llateral
black arrowheadembryonic pharynx
red arrowheaddefinitive pharynx
black arrowsprimitive gut
yellow arrowsprimitive ectoderm cells
cyan arrowsbrain
cyan arrowheadsnerve cords
blue arrowheadseye progenitors (trail cells)
purple arrowheadseyes
scale bar100 µm

 

Muscle progenitors arise in the piwi-1+ blastomere population during S5. 

SPIM reconstructed S5 embryo costained with piwi-1 and VAL-like (both in red) and myoD (green). Muscle progenitors, coexpressing piwi-1 and myoD, are dispersed in the embryonic wall. As muscle progenitors differentiate, they are predicted to downregulate piwi-1 and retain expression of myoD. VAL-like is expressed the temporary embryonic pharynx (at bottom) and is not detected in piwi-1+ blastomeres

Anatomical Expression

PAGE et. al., 2020



SMED30008639

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 51

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
Smed sexual biotypeSMED30008639h1SMcG0013330 Contig54307newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008639h1SMcG0013330 Contig54307uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
muscle cellSMED30008639h1SMcG0013330 dd_Smed_v4_12634_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
progenitor cellSMED30008639h1SMcG0013330 KF487099smed_ncbi_20240424PMID:24173799
Cowles et al., 2013		whole organism asexual adult colorimetric in situ hybridization evidence
stem cellSMED30008639h1SMcG0013330 KF487099smed_ncbi_20240424PMID:24173799
Cowles et al., 2013		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30008639h1SMcG0013330 KF487099smed_ncbi_20240424PMID:24173799
Cowles et al., 2013		whole organism asexual adult colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 5 fluorescence in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 5 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 5 fluorescence in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 5 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 KF487099.1smed_ncbi_20240424PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 5 fluorescence in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
cephalic gangliaSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
ventral nerve cordSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 7 colorimetric in situ hybridization evidence
pharynx nerve plexusSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 6 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 5 colorimetric in situ hybridization evidence
muscle progenitor cellSMED30008639h1SMcG0013330 SMED30008639smed_20140614PMID:28072387
Davies et al., 2017		whole organism Stage 8 colorimetric in situ hybridization evidence
musculature systemSMED30008639h1SMcG0013330 myoDsmed_ncbi_20240424PMID:25254346
Scimone et al., 2014		whole organism asexual adult colorimetric in situ hybridization evidence
body wall musculatureSMED30008639h1SMcG0013330 dd_Smed_v4_12634_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
longitudinal muscle cellSMED30008639h1SMcG0013330 dd_Smed_v4_12634_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYOD1 (myogenic differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7611])

HSP 1 Score: 88.9669 bits (219), Expect = 7.647e-19
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 3 
Query:  903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            ++EHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIE L+ LL
Sbjct:   77 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALL 164
[Close]
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYF5 (myogenic factor 5 [Source:HGNC Symbol;Acc:HGNC:7565])

HSP 1 Score: 87.8113 bits (216), Expect = 8.390e-19
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 3 
Query:  900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTT 1442
            +++EHV  P  H   G CL+WACKACK+K+  +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+EL             L+E+ +N       + +    P +  +D     N       +  +T  S    D+   +Y ++    S+LD LS+IVD+I+++
Sbjct:   50 DEDEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQEL-------------LREQVENYYSLPGQSCSEPTSPTSNCSDGMPECNS--PVWSRKSSTFDSIYCPDV-SNVYATDKNSLSSLDCLSNIVDRITSS 217
[Close]
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYF6 (myogenic factor 6 [Source:HGNC Symbol;Acc:HGNC:7566])

HSP 1 Score: 82.0333 bits (201), Expect = 5.547e-17
Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 3 
Query:  906 EEHVLVPGSH------GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EEHVL P         GQCL+WACK CK+K+   DRRKAAT+RERRRL+K+NEAFE LKRRT  NPNQR+PKVEIL++AI YIE L++LL+ +
Sbjct:   59 EEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRL 151
[Close]
BLAST of MyoD-like protein vs. Ensembl Human
Match: MYOG (myogenin [Source:HGNC Symbol;Acc:HGNC:7612])

HSP 1 Score: 75.485 bits (184), Expect = 7.195e-15
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 3 
Query:  936 GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            GQCL WACK CK+K+V VDRR+AAT+RE+RRL+KVNEAFE LKR T  NPNQR+PKVEIL++AI YIE L+ LL+S+
Sbjct:   63 GQCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
[Close]
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980])

HSP 1 Score: 70.0922 bits (170), Expect = 6.384e-13
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3 
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
            VNEAFE +K+RT  NPNQR+PKVEIL++AIDYI +LE +L   GK+
Sbjct:  171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
[Close]
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980])

HSP 1 Score: 70.0922 bits (170), Expect = 6.384e-13
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3 
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
            VNEAFE +K+RT  NPNQR+PKVEIL++AIDYI +LE +L   GK+
Sbjct:  171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
[Close]
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980])

HSP 1 Score: 69.707 bits (169), Expect = 8.245e-13
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3 
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
            VNEAFE +K+RT  NPNQR+PKVEIL++AIDYI +LE +L   GK+
Sbjct:  167 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 212
[Close]
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980])

HSP 1 Score: 69.707 bits (169), Expect = 8.617e-13
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3 
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
            VNEAFE +K+RT  NPNQR+PKVEIL++AIDYI +LE +L   GK+
Sbjct:  171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
[Close]
BLAST of MyoD-like protein vs. Ensembl Celegans
Match: hlh-1 (Myoblast determination protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P22980])

HSP 1 Score: 69.707 bits (169), Expect = 8.617e-13
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 3 
Query: 1038 VNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL 1175
            VNEAFE +K+RT  NPNQR+PKVEIL++AIDYI +LE +L   GK+
Sbjct:  171 VNEAFEVVKQRTCPNPNQRLPKVEILRSAIDYINNLERMLQQAGKM 216
[Close]
BLAST of MyoD-like protein vs. Ensembl Fly
Match: nau (gene:FBgn0002922 transcript:FBtr0301445)

HSP 1 Score: 91.2781 bits (225), Expect = 8.880e-20
Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 3 
Query:  906 EEHVLVP------GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            EEHVL P       S   CL WACKACKKK+V VDRRKAATMRERRRLRKVNEAFE LKRRTS NPNQR+PKVEIL+NAI+YIESLE+LL
Sbjct:  127 EEHVLAPLVCSSAQSSRPCLTWACKACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVEILRNAIEYIESLEDLL 216
[Close]
BLAST of MyoD-like protein vs. Ensembl Fly
Match: nau (gene:FBgn0002922 transcript:FBtr0084472)

HSP 1 Score: 90.8929 bits (224), Expect = 9.998e-20
Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 3 
Query:  906 EEHVLVP------GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            EEHVL P       S   CL WACKACKKK+V VDRRKAATMRERRRLRKVNEAFE LKRRTS NPNQR+PKVEIL+NAI+YIESLE+LL
Sbjct:  127 EEHVLAPLVCSSAQSSRPCLTWACKACKKKSVTVDRRKAATMRERRRLRKVNEAFEILKRRTSSNPNQRLPKVEILRNAIEYIESLEDLL 216
[Close]
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:30513])

HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-19
Identity = 66/90 (73.33%), Postives = 75/90 (83.33%), Query Frame = 3 
Query:  903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNS 1163
            ++EHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL S
Sbjct:   52 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSTNPNQRLPKVEILRNAISYIESLQALLRS 141
[Close]
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myf5 (myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6])

HSP 1 Score: 84.3445 bits (207), Expect = 6.212e-18
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 3 
Query:  840 TSSNSSPQKLSLAIEQHLCPNKE-EHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            ++  SSP+ L       L  ++E EHV  PG+    G CL WACKACK+K   VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL+ELL
Sbjct:   13 STCASSPEDLEFGASGELTGSEEDEHVRAPGAPHQPGHCLQWACKACKRKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQELL 122
[Close]
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myf5 (myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6])

HSP 1 Score: 84.3445 bits (207), Expect = 6.212e-18
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 3 
Query:  840 TSSNSSPQKLSLAIEQHLCPNKE-EHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            ++  SSP+ L       L  ++E EHV  PG+    G CL WACKACK+K   VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL+ELL
Sbjct:   13 STCASSPEDLEFGASGELTGSEEDEHVRAPGAPHQPGHCLQWACKACKRKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQELL 122
[Close]
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:404208])

HSP 1 Score: 79.7221 bits (195), Expect = 2.028e-16
Identity = 58/92 (63.04%), Postives = 75/92 (81.52%), Query Frame = 3 
Query:  906 EEHVLVPGS-----HGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EEHVL P        GQCL+WACK CK+K+   DRRKAAT+RERRRL+K+NEAF+ LK++T  NPNQR+PKVEIL++AI+YIE L++LL+S+
Sbjct:   59 EEHVLAPPGLQAHCEGQCLMWACKICKRKSAPTDRRKAATLRERRRLKKINEAFDALKKKTVPNPNQRLPKVEILRSAINYIEKLQDLLHSL 150
[Close]
BLAST of MyoD-like protein vs. Ensembl Zebrafish
Match: myog (myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265])

HSP 1 Score: 73.9442 bits (180), Expect = 7.915e-15
Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 3 
Query:  882 EQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EQ  CP            GQCL WACK CK+K+V +DRRKAAT+RE+RRL+KVNEAFE LKR T  NPNQR+PKVEIL++AI YIE L+ L++S+
Sbjct:   78 EQQHCP------------GQCLPWACKVCKRKSVTMDRRKAATLREKRRLKKVNEAFEALKRSTLMNPNQRLPKVEILRSAIQYIERLQALVSSL 160
[Close]
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: dbndd1 (dysbindin (dystrobrevin binding protein 1) domain containing 1 [Source:Xenbase;Acc:XB-GENE-983679])

HSP 1 Score: 89.7373 bits (221), Expect = 1.690e-19
Identity = 89/190 (46.84%), Postives = 114/190 (60.00%), Query Frame = 3 
Query:  900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLP------TTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTT 1442
            +++EHV  P  H   G CL+WACKACK+K+  +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL++LL           E  E   + P  S T       P +  +D          T C  P      ++  +   SDL Q  + S  L  S+LD LSSIVD+IS++
Sbjct:   50 DEDEHVRAPIGHHQAGNCLMWACKACKRKSSTMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIKYIESLQDLLQ----------EQVENYYSLPGQSCTEPGS---PTSSCSDGM--------TDCSSPQWSGRNSSFDNVYCSDL-QTSFSSTKLTLSSLDCLSSIVDRISSS 217
[Close]
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: cuzd1.2 (CUB and zona pellucida-like domains 1, gene 2 [Source:Xenbase;Acc:XB-GENE-5998436])

HSP 1 Score: 91.2781 bits (225), Expect = 6.224e-19
Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 3 
Query:  900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
            N++EHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL 
Sbjct:   62 NEDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSTNPNQRLPKVEILRNAIRYIESLQSLLR 151
[Close]
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:549914])

HSP 1 Score: 85.1149 bits (209), Expect = 5.091e-18
Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 3 
Query:  900 NKEEHVLVPGS-----HGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            ++EEHVL P        GQCL+WACK CK+K+   DRRKAAT+RERRRL+K+NEAFE LKRRT  NPNQR+PKVEIL++AI+YIE L++LL+S+
Sbjct:   56 SEEEHVLAPPGLQPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAINYIERLQDLLHSL 149
[Close]
BLAST of MyoD-like protein vs. Ensembl Xenopus
Match: myog (myogenin (myogenic factor 4) [Source:NCBI gene;Acc:549479])

HSP 1 Score: 75.485 bits (184), Expect = 9.369e-15
Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 3 
Query:  936 GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGK 1172
            GQCL WACK CK+KTV +DRR+AAT+RE+RRL+KVNEAFE LKR T  NPNQR+PKVEIL++AI YIE L+ LL S+ +
Sbjct:   74 GQCLPWACKVCKRKTVSMDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQTLLASLNQ 152
[Close]
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myod1 (myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275])

HSP 1 Score: 93.5893 bits (231), Expect = 1.756e-20
Identity = 87/188 (46.28%), Postives = 106/188 (56.38%), Query Frame = 3 
Query:  903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAG---KQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKS---STLDQLSSIVDKIST 1439
            ++EHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIE L+ LL      P             P       +G      P +  +D     +  P      P  +  Y  +   +   +S   KS   S+LD LSSIV++IST
Sbjct:   77 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAFYAPGPLPPGRGSEHYSGDSDASSPRSNCSDGMMDYSGPPSG----PRRQNGYDTAYYSEAARESRPGKSAAVSSLDCLSSIVERIST 260
[Close]
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myf5 (myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252])

HSP 1 Score: 88.5817 bits (218), Expect = 3.016e-19
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 3 
Query:  900 NKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            + EEHV  P  H   G CL+WACKACK+K+  +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+ELL
Sbjct:   50 DDEEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQELL 138
[Close]
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myf6 (myogenic factor 6 [Source:MGI Symbol;Acc:MGI:97253])

HSP 1 Score: 82.4185 bits (202), Expect = 2.605e-17
Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 3 
Query:  906 EEHVLVPGSH------GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EEHVL P         GQCL+WACK CK+K+   DRRKAAT+RERRRL+K+NEAFE LKRRT  NPNQR+PKVEIL++AI YIE L++LL+ +
Sbjct:   59 EEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRL 151
[Close]
BLAST of MyoD-like protein vs. Ensembl Mouse
Match: Myog (myogenin [Source:MGI Symbol;Acc:MGI:97276])

HSP 1 Score: 75.0998 bits (183), Expect = 6.443e-15
Identity = 55/77 (71.43%), Postives = 67/77 (87.01%), Query Frame = 3 
Query:  936 GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            GQCL WACK CK+K+V VDRR+AAT+RE+RRL+KVNEAFE LKR T  NPNQR+PKVEIL++AI YIE L+ LL+S+
Sbjct:   63 GQCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
[Close]
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|Q00492|SUM1_LYTVA (Transcription factor SUM-1 OS=Lytechinus variegatus OX=7654 GN=SUM-1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.807e-21
Identity = 66/87 (75.86%), Postives = 73/87 (83.91%), Query Frame = 3 
Query:  909 EHVLVPGSHGQ----CLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            EHVL PG HGQ    CL+WACKACK+K V VD+RKAAT+RERRRLRKVNEAFE LKR T  NPNQR+PKVEIL+NAI+YIE LE LL
Sbjct:   81 EHVLAPGFHGQGERRCLMWACKACKRKNVAVDKRKAATLRERRRLRKVNEAFEALKRHTCANPNQRLPKVEILRNAIEYIEKLERLL 167
[Close]
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|P16075|MYOD1_CHICK (Myoblast determination protein 1 homolog OS=Gallus gallus OX=9031 GN=MYOD1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 8.499e-21
Identity = 91/192 (47.40%), Postives = 113/192 (58.85%), Query Frame = 3 
Query:  897 PNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV--GKLPATVGELKERRKNNPE-NSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTI 1454
            P +EEHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVNEAFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL        P       E   ++P  N    +     P      +   ++ Y             Y  S  D +  +S+++  S+LD LSSIV++IST N+T 
Sbjct:   66 PTEEEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSTNPNQRLPKVEILRNAIRYIESLQALLREQEDAYYPVLEHYSGESDASSPRSNCSDGMMEYSGPPCSSRRRNSYDSSY-------------YTESPNDPKHGKSSVV--SSLDCLSSIVERISTDNSTC 242
[Close]
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|Q08856|MYF5_CHICK (Myogenic factor 5 OS=Gallus gallus OX=9031 GN=MYF5 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.498e-20
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 3 
Query:  894 CPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
            CP +EEHV  P  H   G CL+WACKACK+K+  +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+ELL 
Sbjct:   50 CPEEEEHVRAPSGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTANPNQRLPKVEILRNAIRYIESLQELLR 141
[Close]
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|P34061|MYF5_COTJA (Myogenic factor 5 (Fragment) OS=Coturnix japonica OX=93934 GN=MYF5 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.684e-20
Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 3 
Query:  894 CPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
            CP +EEH+  P  H   G CL+WACKACK+K+  +DRRKAATMRERRRL+KVN+AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+ELL 
Sbjct:   38 CPEEEEHIRAPSGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTANPNQRLPKVEILRNAIRYIESLQELLR 129
[Close]
BLAST of MyoD-like protein vs. UniProt/SwissProt
Match: sp|Q91154|MYF5_NOTVI (Myogenic factor 5 OS=Notophthalmus viridescens OX=8316 GN=MYF-5 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.958e-20
Identity = 90/186 (48.39%), Postives = 117/186 (62.90%), Query Frame = 3 
Query:  894 CPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKS-STLDQLSSIVDKIST 1439
            C ++EEHV  P  H   G CLLWACKACK+K+  +DRRKAATMRERRRL+KVN AFETLKR T+ NPNQR+PKVEIL+NAI YIESL+EL             L+E+ +N         +    PL+  +D   AE   P    +  +   +Y  SD+   +Y ++ L + S+LD LSSIVD+IS+
Sbjct:   48 CSDEEEHVRAPSGHHQAGHCLLWACKACKRKSSTMDRRKAATMRERRRLKKVNSAFETLKRCTTANPNQRLPKVEILRNAISYIESLQEL-------------LREQVENYYTLPGQRCSEPGSPLSNCSDGM-AECNSPAWSRRNGSFDSAY-CSDI-PTMYPTDKLSTLSSLDCLSSIVDRISS 217
[Close]
BLAST of MyoD-like protein vs. TrEMBL
Match: Q8MWP6 (MyoD-like protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 774.622 bits (1999), Expect = 0.000e+0
Identity = 465/466 (99.79%), Postives = 466/466 (100.00%), Query Frame = 3 
Query:   93 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 1490
            MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASD+DQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS
Sbjct:    1 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDIDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 466
[Close]
BLAST of MyoD-like protein vs. TrEMBL
Match: U5YTB0 (MyoD protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=myoD PE=2 SV=1)

HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0
Identity = 406/408 (99.51%), Postives = 407/408 (99.75%), Query Frame = 3 
Query:  111 FPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTR 1334
            FPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQ+INDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV KLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTR
Sbjct:    1 FPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQAINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVRKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTR 408
[Close]
BLAST of MyoD-like protein vs. TrEMBL
Match: G1EN33 (Myogenic determinant factor OS=Dugesia japonica OX=6161 GN=MDF PE=2 SV=1)

HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0
Identity = 404/507 (79.68%), Postives = 440/507 (86.79%), Query Frame = 3 
Query:   93 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYS-------PTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDK--QKAENKYPETICKLPTTRKSYVASDLDQQ-IYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS*IHNKTQQILY*PINFVLNSFALIHIVHF 1577
            MIHSGSFPGSTCPI+YDYSGPYSAGLEAAPFLVNQ CPY   TN MPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKI+QKLPTT SKT+PSTLVSTSSNS+SN+E     S SSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSP FAL+QYD++ ++QPSMTDLYHSSLAASS LNLNYSQHKSRHLSED GSC D Q+Q   SNN   N+ +       PTTADFGSPKALSSSSQSINDGRQPTSS+SSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPA++GELK+RRKNN EN+R+ I GKQKP NKINDK  QK EN     +CK+ + RKSY+AS+LD Q +YQ+NMLKSSTLDQLSSIVDKIST N+T+ D+S++ KPE     N    + Y  +   LN+ ALI+IV+F
Sbjct:    1 MIHSGSFPGSTCPISYDYSGPYSAGLEAAPFLVNQNCPYTGSTNPMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIDQKLPTTVSKTSPSTLVSTSSNSLSNAEFNSTRSSSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPSFALRQYDSSSSTQPSMTDLYHSSLAASSTLNLNYSQHKSRHLSEDTGSCPDQQNQTNYSNNTTTNNSNNHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSHSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPASMGELKDRRKNNTENTRSTITGKQKPSNKINDKIIQKTEN-----LCKMTSNRKSYIASELDHQVVYQANMLKSSTLDQLSSIVDKISTNNSTLLDNSVETKPEKK--LNLWNYLFY--LFHFLNTPALINIVNF 498
[Close]
BLAST of MyoD-like protein vs. TrEMBL
Match: A0A158QDV4 (BHLH domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS3801 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.106e-26
Identity = 96/170 (56.47%), Postives = 110/170 (64.71%), Query Frame = 3 
Query:  807 SSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKL--------PATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAE 1292
            SS  +++ R P S   S      + ++H   +KEEHVL PGSHGQCLLWACKACKKKT+ VDRRKAATMRERRRLRKVNEAFETLKRRT  NPNQRMPKVEIL+ AIDYIE+LEE+L+  G L        P T G L       P  + +       P NKIN    A 
Sbjct:  298 SSLGMSEDRSPISMGDSGDDTCSSDDEHGPGSKEEHVLAPGSHGQCLLWACKACKKKTMQVDRRKAATMRERRRLRKVNEAFETLKRRTCSNPNQRMPKVEILRTAIDYIENLEEMLHRNGVLLGASPTVTPPTAGNLLRSAGRYPSTNPST------PSNKINSVDGAR 461
[Close]
BLAST of MyoD-like protein vs. TrEMBL
Match: A0A419Q881 (Transcription factor SUM-1 OS=Clonorchis sinensis OX=79923 GN=SUM-1 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.192e-25
Identity = 81/98 (82.65%), Postives = 86/98 (87.76%), Query Frame = 3 
Query:  903 KEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGEL 1196
            KEEHV+VPGSHGQCLLWACKACKKKT+ VDRRKAATMRERRRLRKVNEAFETLKRRT  NPNQRMPKVEIL+NAIDYIE+LEE+L   G LP     L
Sbjct:  598 KEEHVIVPGSHGQCLLWACKACKKKTMQVDRRKAATMRERRRLRKVNEAFETLKRRTCANPNQRMPKVEILRNAIDYIENLEEMLQHNGVLPIGTSPL 695
[Close]
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:103033512])

HSP 1 Score: 94.7449 bits (234), Expect = 2.298e-21
Identity = 85/182 (46.70%), Postives = 109/182 (59.89%), Query Frame = 3 
Query:  903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKIST 1439
            ++EHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL S       V + +    ++  + R+  +      N ++   +  N Y            SY     +  +  S     S+LD LSSIV++IST
Sbjct:   52 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRSQEDSYYPVLD-QYSGDSDASSPRSNCSDGMMDFNGLSCPSRRRNSY----------DSSYFNESQNVDVRSSKSTVVSSLDCLSSIVERIST 222
[Close]
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:103033512])

HSP 1 Score: 92.4337 bits (228), Expect = 1.683e-20
Identity = 85/182 (46.70%), Postives = 113/182 (62.09%), Query Frame = 3 
Query:  903 KEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKIST 1439
            ++EHV  P  H   G+CLLWACKACK+KT + DRRKAATMRERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL S       V + +    ++  + R+  +      N ++   +  N Y  +          +  S  D +  +S ++  S+LD LSSIV++IST
Sbjct:   55 EDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRSQEDSYYPVLD-QYSGDSDASSPRSNCSDGMMDFNGLSCPSRRRNSYDSSY---------FNESQNDVRSSKSTVV--SSLDCLSSIVERIST 224
[Close]
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myf5 (myogenic factor 5 [Source:NCBI gene;Acc:103046186])

HSP 1 Score: 79.7221 bits (195), Expect = 1.739e-16
Identity = 66/108 (61.11%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:  849 NSSPQKLSLAIEQHLCPNKE-EHVLVP-GSH--GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLN 1160
             SSP+ L       L  ++E EH+  P G H  G CL WACKACK+K   VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL++LL 
Sbjct:   12 TSSPEDLDFGPSGELTGSEEDEHIRAPDGLHQPGHCLQWACKACKRKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQDLLR 119
[Close]
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myog (myogenin [Source:NCBI gene;Acc:103037490])

HSP 1 Score: 74.7146 bits (182), Expect = 1.299e-14
Identity = 57/95 (60.00%), Postives = 71/95 (74.74%), Query Frame = 3 
Query:  882 EQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EQ  CP            GQCL WACK CK+K+V +DRR+AAT+RE+RRL+KVNEAFE LKR T  NPNQR+PKVEIL++AI YIE L+ L++S+
Sbjct:   79 EQQHCP------------GQCLPWACKVCKRKSVTMDRRRAATLREKRRLKKVNEAFEALKRSTLMNPNQRLPKVEILRSAIQYIEKLQALVSSL 161
[Close]
BLAST of MyoD-like protein vs. Ensembl Cavefish
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:404208])

HSP 1 Score: 74.3294 bits (181), Expect = 1.326e-14
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 3 
Query:  906 EEHVLVP-----GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EEHV  P        G CL+WACK CK+K    DRRKAAT+RERRRL+K+NEAFE LK++T  NPNQR+PKVEIL++AI+YIE L++LL+S+
Sbjct:   62 EEHVPAPPGLQAHCEGHCLIWACKICKRKCAPNDRRKAATLRERRRLKKINEAFEALKKKTVPNPNQRLPKVEILRSAINYIEKLQDLLHSL 153
[Close]
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:101171160])

HSP 1 Score: 90.1225 bits (222), Expect = 7.271e-20
Identity = 84/187 (44.92%), Postives = 111/187 (59.36%), Query Frame = 3 
Query:  906 EEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENS-RTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTI 1454
            +EHV  P  H   G+CLLWACKACK+KT + DRRKAAT+RERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL + G+       L+    ++  +S R+  +      N    +   +  Y            SY +  L+           S+LD LSSIV++IST ++ +
Sbjct:   41 DEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATLRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRA-GQEDGFYPVLEHYSGDSDASSPRSNCSDGMTDFNGPRCQTTQKGSY---------DGGSYFSEALNGGHRNDRSSVVSSLDCLSSIVERISTDSSCL 217
[Close]
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myod1 (myogenic differentiation 1 [Source:NCBI gene;Acc:101171160])

HSP 1 Score: 89.7373 bits (221), Expect = 1.656e-19
Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 3 
Query:  873 LAIEQHLCPNKEEHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNS 1163
            L + Q      +EHV  P  H   G+CLLWACKACK+KT + DRRKAAT+RERRRL KVN+AFETLKR TS NPNQR+PKVEIL+NAI YIESL+ LL +
Sbjct:   67 LHVHQRAEVEDDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATLRERRRLSKVNDAFETLKRCTSANPNQRLPKVEILRNAISYIESLQALLRA 166
[Close]
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myf5 (myogenic factor 5 [Source:NCBI gene;Acc:101161281])

HSP 1 Score: 85.5001 bits (210), Expect = 1.732e-18
Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 3 
Query:  855 SPQKLSLAIEQHLCPNKE-EHVLVPGSH---GQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNS-VGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASD-LDQQIYQSNMLKSSTLDQLSSIVDKISTTNTT 1451
            SP  L       L  ++E EHV VPG+    G CL WACKACK+K+  VDRR+AATMRERRRL+KVN AFE L+R TS NP+QR+PKVEIL+NAI YIESL+ELL   V       GE      +   +    +AG   P+      Q+    Y        ++  SY  ++ LD +        +S+L+ LSSIVD++S+  ++
Sbjct:   18 SPDDLEFGSSLELTGSEEDEHVRVPGAPHQPGHCLQWACKACKRKSSFVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQELLREQVENFYGLPGESSSEPGSPLSSCSDGMAGGSSPV-----WQQLNANY--------SSSYSYTKNESLDNKT-----AGASSLECLSSIVDRLSSVESS 204
[Close]
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: ENSORLT00000036191.1 (myoblast determination protein 1 homolog 1-like [Source:NCBI gene;Acc:105357454])

HSP 1 Score: 85.1149 bits (209), Expect = 2.605e-18
Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 3 
Query:  903 KEEHVLVPGS---HGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELL 1157
            +++HV  PG     G CLLWACKACK+KT H DRRKAATMRERRRL KVN AFETLKR T  NP+QR+PKVEIL+NAI YIESL+ LL
Sbjct:   59 EDQHVRAPGGPHQAGHCLLWACKACKRKTTHADRRKAATMRERRRLSKVNNAFETLKRCTVSNPSQRLPKVEILRNAISYIESLQALL 146
[Close]
BLAST of MyoD-like protein vs. Ensembl Medaka
Match: myf6 (myogenic factor 6 [Source:NCBI gene;Acc:105353543])

HSP 1 Score: 80.4925 bits (197), Expect = 1.101e-16
Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 3 
Query:  906 EEHVLVP-----GSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSV 1166
            EEHVL P        GQCL+WACK CKKK+   DRRKAAT+RERRRL+K+NEAF+ LKR+T  NPNQR+PKVEIL++AI YIE L++LL ++
Sbjct:   78 EEHVLAPPGLQAHCEGQCLMWACKICKKKSAPTDRRKAATLRERRRLKKINEAFDALKRKTVANPNQRLPKVEILRSAISYIERLQDLLQTL 169
[Close]
BLAST of MyoD-like protein vs. Planmine SMEST
Match: SMESG000034317.1 (SMESG000034317.1)

HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0
Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 3 
Query:   93 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHXXXXXXXXXXXXXXQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWXXXXXXXXTVHVDXXXXXXXXXXXXXXXVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 1490
            MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKP NKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS
Sbjct:    1 MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSLSLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTLVSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAGYYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSEDAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPTSSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVDRRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIESLEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPPNKINDKQKAENKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTTNTTIADHSMDAKPENS 466
The following BLAST results are available for this feature:
BLAST of MyoD-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
MYOD17.647e-1973.86myogenic differentiation 1 [Source:HGNC Symbol;Acc... [more]
MYF58.390e-1944.02myogenic factor 5 [Source:HGNC Symbol;Acc:HGNC:756... [more]
MYF65.547e-1764.52myogenic factor 6 [Source:HGNC Symbol;Acc:HGNC:756... [more]
MYOG7.195e-1571.43myogenin [Source:HGNC Symbol;Acc:HGNC:7612][more]
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BLAST of MyoD-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hlh-16.384e-1365.22Myoblast determination protein 1 homolog [Source:... [more]
hlh-16.384e-1365.22Myoblast determination protein 1 homolog [Source:... [more]
hlh-18.245e-1365.22Myoblast determination protein 1 homolog [Source:... [more]
hlh-18.617e-1365.22Myoblast determination protein 1 homolog [Source:... [more]
hlh-18.617e-1365.22Myoblast determination protein 1 homolog [Source:... [more]
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BLAST of MyoD-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
nau8.880e-2077.78gene:FBgn0002922 transcript:FBtr0301445[more]
nau9.998e-2077.78gene:FBgn0002922 transcript:FBtr0084472[more]
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BLAST of MyoD-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
myod11.483e-1973.33myogenic differentiation 1 [Source:NCBI gene;Acc:3... [more]
myf56.212e-1860.91myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616... [more]
myf56.212e-1860.91myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616... [more]
myf62.028e-1663.04myogenic factor 6 [Source:NCBI gene;Acc:404208][more]
myog7.915e-1561.05myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265][more]
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BLAST of MyoD-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
dbndd11.690e-1946.84dysbindin (dystrobrevin binding protein 1) domain ... [more]
cuzd1.26.224e-1974.44CUB and zona pellucida-like domains 1, gene 2 [Sou... [more]
myf65.091e-1864.89myogenic factor 6 [Source:NCBI gene;Acc:549914][more]
myog9.369e-1569.62myogenin (myogenic factor 4) [Source:NCBI gene;Acc... [more]
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BLAST of MyoD-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Myod11.756e-2046.28myogenic differentiation 1 [Source:MGI Symbol;Acc:... [more]
Myf53.016e-1971.91myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252... [more]
Myf62.605e-1764.52myogenic factor 6 [Source:MGI Symbol;Acc:MGI:97253... [more]
Myog6.443e-1571.43myogenin [Source:MGI Symbol;Acc:MGI:97276][more]
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BLAST of MyoD-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q00492|SUM1_LYTVA7.807e-2175.86Transcription factor SUM-1 OS=Lytechinus variegatu... [more]
sp|P16075|MYOD1_CHICK8.499e-2147.40Myoblast determination protein 1 homolog OS=Gallus... [more]
sp|Q08856|MYF5_CHICK1.498e-2071.74Myogenic factor 5 OS=Gallus gallus OX=9031 GN=MYF5... [more]
sp|P34061|MYF5_COTJA1.684e-2070.65Myogenic factor 5 (Fragment) OS=Coturnix japonica ... [more]
sp|Q91154|MYF5_NOTVI1.958e-2048.39Myogenic factor 5 OS=Notophthalmus viridescens OX=... [more]
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BLAST of MyoD-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q8MWP60.000e+099.79MyoD-like protein OS=Schmidtea mediterranea OX=793... [more]
U5YTB00.000e+099.51MyoD protein (Fragment) OS=Schmidtea mediterranea ... [more]
G1EN330.000e+079.68Myogenic determinant factor OS=Dugesia japonica OX... [more]
A0A158QDV47.106e-2656.47BHLH domain-containing protein OS=Hymenolepis dimi... [more]
A0A419Q8811.192e-2582.65Transcription factor SUM-1 OS=Clonorchis sinensis ... [more]
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BLAST of MyoD-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
myod12.298e-2146.70myogenic differentiation 1 [Source:NCBI gene;Acc:1... [more]
myod11.683e-2046.70myogenic differentiation 1 [Source:NCBI gene;Acc:1... [more]
myf51.739e-1661.11myogenic factor 5 [Source:NCBI gene;Acc:103046186][more]
myog1.299e-1460.00myogenin [Source:NCBI gene;Acc:103037490][more]
myf61.326e-1461.96myogenic factor 6 [Source:NCBI gene;Acc:404208][more]
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BLAST of MyoD-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of MyoD-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of MyoD-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of MyoD-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
myod17.271e-2044.92myogenic differentiation 1 [Source:NCBI gene;Acc:1... [more]
myod11.656e-1966.00myogenic differentiation 1 [Source:NCBI gene;Acc:1... [more]
myf51.732e-1842.93myogenic factor 5 [Source:NCBI gene;Acc:101161281][more]
ENSORLT00000036191.12.605e-1871.59myoblast determination protein 1 homolog 1-like [S... [more]
myf61.101e-1664.13myogenic factor 6 [Source:NCBI gene;Acc:105353543][more]
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BLAST of MyoD-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000034317.10.000e+099.79SMESG000034317.1[more]
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Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30008639
GenBankAAN03696.1
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30008639 ID=SMED30008639|Name=MyoD-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1606bp
GTTCATATTACCAACTGTTCGCCATTAATTCAGCCTGTTTTACGCCTCGT
AACAACTGTTACTTCAACAATACCGATCCAGCCCAATAAACAATGATACA
CTCCGGATCATTTCCAGGTTCCACTTGTCCGATTAACTATGACTATTCCG
GTCCATACTCAGCAGGTCTTGAGGCAGCTCCATTTTTAGTCAATCAAACC
TGTCCATATAACACTGGAACAAATACAATGCCTCCTTCGTTGTCACTAGT
AGATAATATGATGATGAATAATTCCATGCATCTTTATGATAGACTGAATA
CTCATCATTCAGCGTCGTATTTTCCTCAGATTTTAAACAAAATCGAACAG
AAATTACCAACAACCTCGAGTAAAACCACTCCATCAACATTGGTTTCAAC
ATCCTCCAATTCCATATCGAATTCTGAGTTTAATTCGTCGCGATCTTCGT
CACAATTTCCAACATACGATTTGATTTCGTCACTCAATAATAGCAACTAC
GACATGTACGATTCGCCCTATGCCGCCTATCTGGCCGCTGGTTATTATCA
ATCTCCTGGATTTGCGCTCAAACAGTACGACGCTGCTGGAACATCTCAAC
CATCAATGACAGATTTGTACCATTCATCACTAGCAGCCAGTTCAGGCTTA
AATTTGAATTATTCACAGCATAAATCGAGACATTTATCAGAAGATGCTGG
ATCATGCCAAGATCCGCAGTCTCAAAATATCACAAGCAATAATCATCATA
ACAATTCGTATAGTCCAACAACTGCTGATTTCGGATCACCAAAAGCCTTA
TCAAGTAGCAGCCAGTCCATAAATGATGGAAGACAACCGACCAGTAGTAA
TTCCAGTCCTCAAAAACTATCACTAGCAATTGAACAACACTTATGTCCAA
ATAAAGAGGAACATGTGCTAGTTCCAGGGTCACATGGTCAATGCTTGTTG
TGGGCCTGTAAAGCTTGCAAAAAGAAAACGGTTCACGTTGATCGCCGCAA
AGCGGCAACAATGCGTGAAAGACGTCGATTGAGAAAAGTGAATGAAGCTT
TTGAAACATTGAAACGAAGAACGAGCGGTAACCCAAATCAAAGAATGCCA
AAAGTCGAAATTCTAAAGAACGCGATTGATTACATTGAGAGTTTGGAAGA
GTTGTTGAATTCCGTGGGAAAATTACCTGCAACCGTTGGAGAATTGAAAG
AACGCCGCAAAAACAACCCAGAAAATTCGAGAACAGCAATCGCCGGAAAA
CAAAAGCCACTAAATAAAATTAATGATAAACAGAAAGCTGAAAACAAATA
TCCCGAGACCATCTGCAAACTCCCGACGACTAGGAAATCCTATGTTGCTT
CCGACCTTGATCAGCAGATTTATCAATCAAACATGTTGAAGAGTTCAACT
CTTGATCAACTTTCCTCGATAGTAGACAAAATCTCTACGACTAATACAAC
AATTGCCGACCATTCAATGGACGCTAAGCCCGAAAATAGTTGAATACATA
ACAAAACGCAACAAATATTATATTAACCTATTAATTTTGTTCTAAACTCG
TTTGCCCTGATACATATTGTACATTTTCTTTCAATAGAATGTTCTTATAA
TTATAA
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protein sequence of SMED30008639-orf-1

>SMED30008639-orf-1 ID=SMED30008639-orf-1|Name=SMED30008639-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=467bp
MIHSGSFPGSTCPINYDYSGPYSAGLEAAPFLVNQTCPYNTGTNTMPPSL
SLVDNMMMNNSMHLYDRLNTHHSASYFPQILNKIEQKLPTTSSKTTPSTL
VSTSSNSISNSEFNSSRSSSQFPTYDLISSLNNSNYDMYDSPYAAYLAAG
YYQSPGFALKQYDAAGTSQPSMTDLYHSSLAASSGLNLNYSQHKSRHLSE
DAGSCQDPQSQNITSNNHHNNSYSPTTADFGSPKALSSSSQSINDGRQPT
SSNSSPQKLSLAIEQHLCPNKEEHVLVPGSHGQCLLWACKACKKKTVHVD
RRKAATMRERRRLRKVNEAFETLKRRTSGNPNQRMPKVEILKNAIDYIES
LEELLNSVGKLPATVGELKERRKNNPENSRTAIAGKQKPLNKINDKQKAE
NKYPETICKLPTTRKSYVASDLDQQIYQSNMLKSSTLDQLSSIVDKISTT
NTTIADHSMDAKPENS*
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Aliases
The feature 'MyoD-like protein' has the following synonyms
Synonym
myoD
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000044cephalic ganglia
PLANA:0000071longitudinal muscle cell
PLANA:0000097ventral nerve cord
PLANA:0000101muscle cell
PLANA:0000120progenitor cell
PLANA:0000121stem cell
PLANA:0000240body wall musculature
PLANA:0000465pharynx nerve plexus
PLANA:0002056medial muscle cell
PLANA:0002142parenchyma
PLANA:0003001lateral region of the whole animal
PLANA:0007549obsolete body wall musculature compartment
PLANA:0000019muscle progenitor cell
PLANA:0000428musculature system
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR039704Myogenic_factor
IPR002546Basic
IPR011598bHLH_dom
Vocabulary: biological process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0007517muscle organ development
Vocabulary: molecular function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
Vocabulary: Schmidtea mediterranea Developmental Stages
TermDefinition
PLANA:0000008Stage 8
PLANA:0000005Stage 5
PLANA:0000007Stage 7
PLANA:0000006Stage 6
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002546Myogenic basic muscle-specific proteinSMARTSM00520basiccoord: 221..305
e-value: 1.8E-9
score: 47.5
IPR002546Myogenic basic muscle-specific proteinPFAMPF01586Basiccoord: 244..300
e-value: 1.1E-10
score: 42.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 306..357
e-value: 1.0E-14
score: 64.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 301..352
e-value: 5.5E-12
score: 45.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 300..351
score: 15.917
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 299..355
e-value: 9.36035E-16
score: 69.5503
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 290..356
e-value: 2.3E-20
score: 74.0
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 300..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..400
IPR039704Myogenic factorPANTHERPTHR11534MYOGENIC FACTORcoord: 211..453