SMED30008627

Overview
NameSMED30008627
Smed IDSMED30008627
Length (bp)2183
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30008627 (SMED30008627) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30008627 (SMED30008627) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30008627 (SMED30008627) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30008627 (SMED30008627) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30008627

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30008627SMESG000041685.1 SmedASXL_007633SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30008627SMESG000041685.1 SMESG000041696.1 dd_Smed_v4_13591_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30008627SMESG000041685.1 SMESG000041696.1 dd_Smed_v4_13591_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30008627SMESG000041685.1 SMESG000041696.1 dd_Smed_v4_13591_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30008627SMESG000041685.1 SMESG000041696.1 dd_Smed_v4_13591_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30008627SMESG000041685.1 SMESG000041696.1 dd_Smed_v4_13591_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30008627SMESG000041685.1 SMESG000041696.1 dd_Smed_v6_13591_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30008627 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.002312:14306..37087 +9641
Homology
[Close]
BLAST of SMED30008627 vs. Ensembl Human
Match: C11orf65 (chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:HGNC:28519])

HSP 1 Score: 193.356 bits (490), Expect = 3.614e-55
Identity = 99/263 (37.64%), Postives = 155/263 (58.94%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            ++K+   IQ+ W+S+++  +F+++  LI+ + +G+P  +++ INPKE EL D+A G  V+FRLGG  FPP+IYYKIFTHRPI+DLCANSP+NY ++  K     HNK           WY RIENNGWR +SD     + +D +  E   K   F +   ++ ++   +RK  K++W+R+MY    L+ K                +++T  L+  AT+ +I   E  G   + +W VDE+LNWT+ L+++ Y+  W  +ATS
Sbjct:   12 QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAK--HTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFW--LSTDGMVVEDK-KESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST--------------HHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATS 255
[Close]
BLAST of SMED30008627 vs. Ensembl Human
Match: C11orf65 (chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:HGNC:28519])

HSP 1 Score: 193.356 bits (490), Expect = 3.614e-55
Identity = 99/263 (37.64%), Postives = 155/263 (58.94%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            ++K+   IQ+ W+S+++  +F+++  LI+ + +G+P  +++ INPKE EL D+A G  V+FRLGG  FPP+IYYKIFTHRPI+DLCANSP+NY ++  K     HNK           WY RIENNGWR +SD     + +D +  E   K   F +   ++ ++   +RK  K++W+R+MY    L+ K                +++T  L+  AT+ +I   E  G   + +W VDE+LNWT+ L+++ Y+  W  +ATS
Sbjct:   12 QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAK--HTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFW--LSTDGMVVEDK-KESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST--------------HHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATS 255
[Close]
BLAST of SMED30008627 vs. Ensembl Human
Match: C11orf65 (chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:HGNC:28519])

HSP 1 Score: 193.356 bits (490), Expect = 3.614e-55
Identity = 99/263 (37.64%), Postives = 155/263 (58.94%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            ++K+   IQ+ W+S+++  +F+++  LI+ + +G+P  +++ INPKE EL D+A G  V+FRLGG  FPP+IYYKIFTHRPI+DLCANSP+NY ++  K     HNK           WY RIENNGWR +SD     + +D +  E   K   F +   ++ ++   +RK  K++W+R+MY    L+ K                +++T  L+  AT+ +I   E  G   + +W VDE+LNWT+ L+++ Y+  W  +ATS
Sbjct:   12 QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAK--HTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFW--LSTDGMVVEDK-KESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST--------------HHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATS 255
[Close]
BLAST of SMED30008627 vs. Ensembl Human
Match: C11orf65 (chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:HGNC:28519])

HSP 1 Score: 193.356 bits (490), Expect = 3.614e-55
Identity = 99/263 (37.64%), Postives = 155/263 (58.94%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            ++K+   IQ+ W+S+++  +F+++  LI+ + +G+P  +++ INPKE EL D+A G  V+FRLGG  FPP+IYYKIFTHRPI+DLCANSP+NY ++  K     HNK           WY RIENNGWR +SD     + +D +  E   K   F +   ++ ++   +RK  K++W+R+MY    L+ K                +++T  L+  AT+ +I   E  G   + +W VDE+LNWT+ L+++ Y+  W  +ATS
Sbjct:   12 QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAK--HTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFW--LSTDGMVVEDK-KESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST--------------HHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATS 255
[Close]
BLAST of SMED30008627 vs. Ensembl Human
Match: C11orf65 (chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:HGNC:28519])

HSP 1 Score: 132.109 bits (331), Expect = 4.533e-34
Identity = 73/196 (37.24%), Postives = 108/196 (55.10%), Query Frame = 3 
Query:  276 FPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            FPP+IYYKIFTHRPI+DLCANSP+NY ++  K     HNK           WY RIENNGWR +SD     + +D +  E   K   F +   ++ ++   +RK  K++W+R+MY    L+ K                +++T  L+  AT+ +I   E  G   + +W VDE+LNWT+ L+++ Y+  W  +ATS
Sbjct:   30 FPPDIYYKIFTHRPIEDLCANSPRNYAKLPAK--HTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFW--LSTDGMVVEDK-KESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST--------------HHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATS 206
[Close]
BLAST of SMED30008627 vs. Ensembl Celegans
Match: glc-3 (Glutamate-gated ChLoride channel; Glutamate-gated chloride channel subunit [Source:UniProtKB/TrEMBL;Acc:G5EEZ3])

HSP 1 Score: 58.151 bits (139), Expect = 1.375e-8
Identity = 74/325 (22.77%), Postives = 136/325 (41.85%), Query Frame = -1 
Query: 1245 VYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSL------DNVKDFK-SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQ----DLSIVVSTELSADEMIFVEYPNDIS-KLNLSDAIDSQEWDLHSHV-DVEIKEVISDCNIGPEKRYTITFTCRAS-----RRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLD---KAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLV 2144
            VY+  +   I  +D VN  +S ++  + +W +  L      D+  DF       ++W P    ++ ++  KQ    ++  P+          ++   RI+ +    + L+ +P D Q    DL+    TE            NDI  +   +D +  ++  LHS +   E+  V  D  +   K  T T++C  +     R+F Y++L   + S+M V++++ SF +       R+ L +  LLT  T    ++  LP + Y   +D    A L  IF  +    W   T I    F   N    +R   +I   + ++IP+ +V
Sbjct:   61 VYVNMLIRSISKIDDVNMEYSVQLTFREEWVDGRLAYGFPGDSTPDFLILTAGQQIWMP----DSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASYAYTE------------NDIEYRWKKTDPVQLKK-GLHSSLPSFELNNV--DTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGALLEFAW--VTYISSRSFYKRNKNCSSRNSLLIETKQALIIPNTVV 364
[Close]
BLAST of SMED30008627 vs. Ensembl Celegans
Match: glc-4 (Glutamate-gated ChLoride channel [Source:UniProtKB/TrEMBL;Acc:Q95QT7])

HSP 1 Score: 54.299 bits (129), Expect = 2.527e-7
Identity = 53/242 (21.90%), Postives = 103/242 (42.56%), Query Frame = -1 
Query: 1311 LWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTEL--SADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVI-SDCNIGPEKRYTITFTC-----RASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFY----DFKTLNYI 2000
            LW P    +N        + +E  +   +    +I  RR+      ++ L ++P D Q+  I  ++    +AD    +EY  D+  + + +  +       +  + EI     + C     K  T T++C     R +R F +F+L   + SSM V + + S+ +   +T  R+ L ++ LLT +T   A++ NLP + Y   +D              +W  A  +F +    ++  +NY+
Sbjct:  137 LWIPDTFFQNEKNGWYHMLNQENRFLKIRSDGKLIYDRRLTLHLACSMHLSRYPMDHQNCEIAFASYAYTTAD----IEYIWDVPAIQIHEGANG------ALPNFEIASFKNASCT---SKTNTGTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIVTLLTMITTSHAINSNLPPVSYAKSID--------------IWVGACVVFIFFSLIEYAVVNYV 351
[Close]
BLAST of SMED30008627 vs. Ensembl Celegans
Match: glc-1 (Glutamate-gated chloride channel alpha [Source:UniProtKB/Swiss-Prot;Acc:G5EBR3])

HSP 1 Score: 52.7582 bits (125), Expect = 7.659e-7
Identity = 61/308 (19.81%), Postives = 123/308 (39.94%), Query Frame = -1 
Query: 1272 DKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSL------DNVKDFKSKEIS-KLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSAD---EMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIE 2165
            D    + V +  +   I  +D VN  +SA++ L+  W +  L      D   DF    +  ++W P     N  +  K T+ +            ++   RI+ +    + L+ +P D Q  SI +++        E ++ E+     K+ LS ++ S +    ++        +++  I    R TI    +  R F +++L   + S M V++++ SF         R+ L +  LLT       ++  LP + Y+  +D  +   +  I C  +          +F  +N+I   + +E   + E
Sbjct:   84 DNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQL---TNTSTTYCTSVTNTGIYSCLRTTI----QLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL----------EFALVNHIANKQGVERKARTE 374
[Close]
BLAST of SMED30008627 vs. Ensembl Celegans
Match: glc-1 (Glutamate-gated chloride channel alpha [Source:UniProtKB/Swiss-Prot;Acc:G5EBR3])

HSP 1 Score: 52.7582 bits (125), Expect = 7.659e-7
Identity = 61/308 (19.81%), Postives = 123/308 (39.94%), Query Frame = -1 
Query: 1272 DKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSL------DNVKDFKSKEIS-KLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSAD---EMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIE 2165
            D    + V +  +   I  +D VN  +SA++ L+  W +  L      D   DF    +  ++W P     N  +  K T+ +            ++   RI+ +    + L+ +P D Q  SI +++        E ++ E+     K+ LS ++ S +    ++        +++  I    R TI    +  R F +++L   + S M V++++ SF         R+ L +  LLT       ++  LP + Y+  +D  +   +  I C  +          +F  +N+I   + +E   + E
Sbjct:   84 DNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQL---TNTSTTYCTSVTNTGIYSCLRTTI----QLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALL----------EFALVNHIANKQGVERKARTE 374
[Close]
BLAST of SMED30008627 vs. Ensembl Celegans
Match: lgc-35 (Ligand-Gated ion Channel [Source:UniProtKB/TrEMBL;Acc:Q9U2E2])

HSP 1 Score: 52.7582 bits (125), Expect = 8.000e-7
Identity = 63/276 (22.83%), Postives = 117/276 (42.39%), Query Frame = -1 
Query: 1365 IRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKD-FKSK-EIS-------KLWNPKIHIENI--YKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKE--VISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCM 2150
            + V +  V   I  V  V   +S E+F +  WR+P L   +D FK+K EIS        LW+P   + N    K  ++  +        + +  ++  RR++ I    ++L  FPFD Q   +   S   +AD++ ++     I  L L               D ++KE  V S         Y+  + C    R   F    ++I S  V++T      + N T  +  + +I+ +T + F  + +E +P++ Y+  +D      +++ +C C+
Sbjct:   98 VHVNVSIVVSNIRSVSEVTMDYSIEMFYRESWRDPRLTYSRDKFKNKTEISLHESYSNYLWHPDTFVPNAISSKNPRRQSITHRSLLRLRNNGSILYSRRLSLILTCGMDLTLFPFDTQLCKMGFESYGYTADKVKYLWSTGAIQSLKLHKI---------RLPDFQVKEAYVTSRVESYATGDYSRLYVCFVFNRAAGFCFLQLIIPSTAVVITSWVSLWMENETSFQDMISIILTITFLLF--SYNEVMPRVSYIKAMD------VYLGVCFCI 356
[Close]
BLAST of SMED30008627 vs. Ensembl Fly
Match: CG6927 (gene:FBgn0029733 transcript:FBtr0070721)

HSP 1 Score: 66.6254 bits (161), Expect = 4.349e-11
Identity = 61/276 (22.10%), Postives = 130/276 (47.10%), Query Frame = -1 
Query: 1395 DKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLD--NVKDFKSKEI-------SKLWNPKIHIEN-----IYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTEL--SADEMIFVEYPNDIS---KLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLG 2165
             ++  + VY+R     + +++  +  F     LQ ++ +P L+  NV   + + I       + LW P I + N     I    ++ ++  +  PD      +I   RI A  +  L LK+FPFD Q  S V+ + +  +++ ++  E    I+    L+L++ +  + W   + ++ ++ ++      G     +++FT   +R  G++++++ L S + V +++ SF + ++    R+ L    LLT +T   A  + LPK+ Y+   +   LG
Sbjct:   62 GQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSIS-PD----GTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAG--NYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLG 330
[Close]
BLAST of SMED30008627 vs. Ensembl Fly
Match: pHCl-2 (gene:FBgn0039840 transcript:FBtr0347502)

HSP 1 Score: 59.3066 bits (142), Expect = 9.187e-9
Identity = 57/261 (21.84%), Postives = 120/261 (45.98%), Query Frame = -1 
Query: 1419 VYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSL------DNVKD--FKSKEISK-LWNPKIHIENIYKENKQTVVREVHYPDKKGSAY----MIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDL-----HSHVDVEIKEVISDCNIGPEKRYTI-TFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLT 2144
            +Y R     + ++D+ +  F+ +  LQ ++ +P L       N +       E+ K LW P I + N     + + V      D+  S Y    ++   R+ A  +  +  ++FPFD Q     + + +    ++ + +  D + ++    +   E++L     +  + V  +  +S  ++  E  Y+I +FT   +R  GY+++++ L S M V +++ SF + ++ T  R  L    LL+ +T  ++   NL K+ Y+T
Sbjct:  105 IYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTN----EQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETD-NPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSL--EGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVT 358
[Close]
BLAST of SMED30008627 vs. Ensembl Fly
Match: pHCl-2 (gene:FBgn0039840 transcript:FBtr0085766)

HSP 1 Score: 59.3066 bits (142), Expect = 9.187e-9
Identity = 57/261 (21.84%), Postives = 120/261 (45.98%), Query Frame = -1 
Query: 1419 VYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSL------DNVKD--FKSKEISK-LWNPKIHIENIYKENKQTVVREVHYPDKKGSAY----MIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDL-----HSHVDVEIKEVISDCNIGPEKRYTI-TFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLT 2144
            +Y R     + ++D+ +  F+ +  LQ ++ +P L       N +       E+ K LW P I + N     + + V      D+  S Y    ++   R+ A  +  +  ++FPFD Q     + + +    ++ + +  D + ++    +   E++L     +  + V  +  +S  ++  E  Y+I +FT   +R  GY+++++ L S M V +++ SF + ++ T  R  L    LL+ +T  ++   NL K+ Y+T
Sbjct:  105 IYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTN----EQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETD-NPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSL--EGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVT 358
[Close]
BLAST of SMED30008627 vs. Ensembl Fly
Match: HisCl1 (gene:FBgn0037950 transcript:FBtr0082471)

HSP 1 Score: 58.9214 bits (141), Expect = 9.217e-9
Identity = 62/281 (22.06%), Postives = 124/281 (44.13%), Query Frame = -1 
Query: 1410 SK*MDKKRQIRVYIRCVFVKIFHV-----DTVNEH---FSAEIFLQSKWREPSLDNVKDFKSKE-------ISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAY----MIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRA-----SRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLD 2177
            SK  DK R  ++  +   V  FHV     D++NE    +  +IFL   WR+P L   ++   +        +  +W P    +  +K  K+    E+  P+     Y    ++   ++  +    ++ + +P D Q  S+++ S   + ++++F+   N    L ++  I+  + D+ ++         +DC I   +  T  FTC A      RR GY + +  + S++ V++++ SF +       R+ L +  LLT  T      ++LP + Y+  +D
Sbjct:   64 SKTYDKNRAPKLLGQPTVV-YFHVTVLSLDSINEESMTYVTDIFLAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRP----DCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIW--NMTDPLVVNTEIELPQLDISNNY-------TTDCTI---EYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAID 327
[Close]
BLAST of SMED30008627 vs. Ensembl Fly
Match: CG8916 (gene:FBgn0030707 transcript:FBtr0301233)

HSP 1 Score: 58.9214 bits (141), Expect = 9.856e-9
Identity = 53/242 (21.90%), Postives = 103/242 (42.56%), Query Frame = -1 
Query: 1410 VDTVNEHFSAEIFLQSKWREPSLDNVKDFKS-----KEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLD 2108
            V  ++  +S + + +  WR+  L      KS     K + K+W P  +  N     K + +  +  P+K      +  ++   R+       +EL+ FP D Q   +V+ +    ++ +  E+ N    ++    +   ++DL S +      V  +   G      + F  +  R  GYF++   +   + V+L++ SF +    T  R+ LC+  +LT  T  +    +LPK+ Y T LD
Sbjct:   45 VSELDMDYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYN----GKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRRE---GDFSVLHVAFNLK--RHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALD 277
[Close]
BLAST of SMED30008627 vs. Ensembl Zebrafish
Match: gabrb4 (gamma-aminobutyric acid type A receptor beta4 subunit [Source:ZFIN;Acc:ZDB-GENE-070424-211])

HSP 1 Score: 71.2478 bits (173), Expect = 1.848e-12
Identity = 59/264 (22.35%), Postives = 114/264 (43.18%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            +  VN  ++  ++ Q  WR+  L   +        ++   +LW P  +  N  K     V  +           ++   RI       ++L+++P D Q+ ++ + S   + D+++F     D    N    +D  E    S V++ +         G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     +FF
Sbjct:   76 ISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGD----NAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFF 333
[Close]
BLAST of SMED30008627 vs. Ensembl Zebrafish
Match: gabrb4 (gamma-aminobutyric acid type A receptor beta4 subunit [Source:ZFIN;Acc:ZDB-GENE-070424-211])

HSP 1 Score: 70.8626 bits (172), Expect = 2.651e-12
Identity = 59/264 (22.35%), Postives = 114/264 (43.18%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            +  VN  ++  ++ Q  WR+  L   +        ++   +LW P  +  N  K     V  +           ++   RI       ++L+++P D Q+ ++ + S   + D+++F     D    N    +D  E    S V++ +         G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     +FF
Sbjct:   76 ISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGD----NAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFF 333
[Close]
BLAST of SMED30008627 vs. Ensembl Zebrafish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230])

HSP 1 Score: 68.1662 bits (165), Expect = 1.759e-11
Identity = 61/268 (22.76%), Postives = 122/268 (45.52%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L            ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F  Y    S +   D I+  ++ +  +  +  K V +    G   R +++F  +  R  GYFIL   + S++  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   83 VSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPDTYFIN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEF--YWQGGSSVTGVDNIELPQFSIIDYKTLSKKVVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFF 339
[Close]
BLAST of SMED30008627 vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66])

HSP 1 Score: 67.3958 bits (163), Expect = 3.214e-11
Identity = 67/288 (23.26%), Postives = 118/288 (40.97%), Query Frame = -1 
Query: 1299 IFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFK-----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK------KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYP-NDIS---KLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENR 2117
            I  VD +N  ++ +IF    W +  L      K     S  + K+W P    +  ++ ++++    +  P++       G      +  INA  +  L+L  FP D     +  S+           YP N+I    +    +  D + W L+    V ++      N    +   +T     SRR GYF +   +  SM V+L++ SF +  +    R  L +  +LT  T      ++LPK+ Y+T +D      +F+ +C     AA      ++ TL+Y T NR
Sbjct:   95 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIP----DTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECY--LKLHNFPMDEHSCPLEFSS---------YGYPKNEIQYRWQRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD------LFVSVCFIFTFAA----LMEYGTLHYFTSNR 357
[Close]
BLAST of SMED30008627 vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66])

HSP 1 Score: 67.0106 bits (162), Expect = 3.448e-11
Identity = 67/288 (23.26%), Postives = 118/288 (40.97%), Query Frame = -1 
Query: 1299 IFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFK-----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK------KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYP-NDIS---KLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENR 2117
            I  VD +N  ++ +IF    W +  L      K     S  + K+W P    +  ++ ++++    +  P++       G      +  INA  +  L+L  FP D     +  S+           YP N+I    +    +  D + W L+    V ++      N    +   +T     SRR GYF +   +  SM V+L++ SF +  +    R  L +  +LT  T      ++LPK+ Y+T +D      +F+ +C     AA      ++ TL+Y T NR
Sbjct:   95 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIP----DTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECY--LKLHNFPMDEHSCPLEFSS---------YGYPKNEIQYRWQRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD------LFVSVCFIFTFAA----LMEYGTLHYFTSNR 357
[Close]
BLAST of SMED30008627 vs. Ensembl Xenopus
Match: helq (helicase, POLQ like [Source:Xenbase;Acc:XB-GENE-993428])

HSP 1 Score: 220.32 bits (560), Expect = 1.955e-65
Identity = 108/265 (40.75%), Postives = 166/265 (62.64%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQ--VRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            +E++   IQR +R  +D Q+F++Y  L++FK KGDP ++L+C+NP E EL D+A G   +FRLGG  FPPNIYYK+FTHRPI D+CANSPK+Y Q  +++  P+Q+HN+  +        WY R+ENNGWR ++ R+   +  D +T   S K + F +   ++ ++   ++K  K++W++KMY        E +   E  D        +  +LV++ATE +I+T E+ G   + DW VDELL+WT+ LSYE Y++ W  + TS
Sbjct:   16 RERAARVIQRAFRRILDIQIFQFYKNLLSFKGKGDPRLLLKCVNPCEAELIDAAAGVHARFRLGGTQFPPNIYYKLFTHRPIVDMCANSPKDYTQNCLKQLLPKQMHNRGLVP-KQDLSGWYARVENNGWRLLTPRISHSL--DLVTIADSRKRIPFHHSKLQRRQDVEKRQKYRKIEWMKKMYY-------EGSLHAETSDP-------EIALLVQQATEGVIQTAEEHGANTVMDWEVDELLSWTNALSYEEYISTWKEIGTS 263
[Close]
BLAST of SMED30008627 vs. Ensembl Xenopus
Match: ENSXETT00000004017.1 (gamma-aminobutyric acid (GABA) A receptor, beta 1 [Source:NCBI gene;Acc:100489344])

HSP 1 Score: 68.1662 bits (165), Expect = 2.157e-11
Identity = 65/283 (22.97%), Postives = 125/283 (44.17%), Query Frame = -1 
Query: 1338 QIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2153
             + V +R     I  V  VN  ++  ++ Q  WR+  L            ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F  Y N   K      ++  E    S +D ++       + G   R +++F  R  R  GYFIL   + S++  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   60 SVEVGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLN----DKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKF--YWNGGDKA--ITGVEKIELPQFSIIDYKMVSRNVIFSTGAYPRLSLSF--RLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFF 332
[Close]
BLAST of SMED30008627 vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027])

HSP 1 Score: 68.1662 bits (165), Expect = 2.526e-11
Identity = 62/269 (23.05%), Postives = 119/269 (44.24%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD------NVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L       N+    ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F     +    N    ++  E    S +D  +       + G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   51 VSEVNMDYTLTMYFQQAWRDKRLSYSVIPLNLT-LDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGN----NAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLR--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 308
[Close]
BLAST of SMED30008627 vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027])

HSP 1 Score: 67.781 bits (164), Expect = 2.667e-11
Identity = 62/269 (23.05%), Postives = 119/269 (44.24%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD------NVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L       N+    ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F     +    N    ++  E    S +D  +       + G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   57 VSEVNMDYTLTMYFQQAWRDKRLSYSVIPLNLT-LDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGN----NAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLR--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 314
[Close]
BLAST of SMED30008627 vs. Ensembl Xenopus
Match: gabrb2 (gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:NCBI gene;Acc:100125027])

HSP 1 Score: 67.781 bits (164), Expect = 3.110e-11
Identity = 62/269 (23.05%), Postives = 119/269 (44.24%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD------NVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L       N+    ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F     +    N    ++  E    S +D  +       + G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   74 VSEVNMDYTLTMYFQQAWRDKRLSYSVIPLNLT-LDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGN----NAVTGVERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLR--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 331
[Close]
BLAST of SMED30008627 vs. Ensembl Mouse
Match: 4930550C14Rik (RIKEN cDNA 4930550C14 gene [Source:MGI Symbol;Acc:MGI:1922561])

HSP 1 Score: 190.66 bits (483), Expect = 2.338e-54
Identity = 96/256 (37.50%), Postives = 152/256 (59.38%), Query Frame = 3 
Query:   96 IQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            IQR W+++++  V++++  LI+ + +G+P  ++R INPKE +L D+A G +V+FRLGG  FPP IYYKIFTHR I+DLCANSP++Y ++  +     HNK           WY+R+ENNGWR +S R    + S  +    S K   F +   ++ ++   +RK  K+ W+R+MY +  L+ K                 N+T  L+ KAT+ +I+++E  G   + +W VDE+LNWT+ L+++ Y+  W   ATS
Sbjct:   19 IQRAWKTFLNVSVYQHFKSLIDLRRQGEPRQIVRYINPKEAQLLDAAAGVQVRFRLGGVRFPPEIYYKIFTHRHIEDLCANSPRDYTKLPAR--YTSHNKDDPPQVEDNSGWYRRVENNGWRPVSYRFWMPLESGVV---DSTKESEFHFSKLKRKQDLEKKRKIKKIDWMRQMYYMGSLEAKATD--------------NETLGLIHKATKGLIKSIEDGGVDSVMEWEVDEVLNWTNTLNFDEYIASWRETATS 255
[Close]
BLAST of SMED30008627 vs. Ensembl Mouse
Match: Gabrb2 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620])

HSP 1 Score: 69.3218 bits (168), Expect = 6.993e-12
Identity = 66/270 (24.44%), Postives = 124/270 (45.93%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD-NVKDFK----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEI--KEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L  NV        ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F    +D    N    +   E    S VD ++  K+V+   + G   R +++F  +  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   74 VSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD----NAVTGVTKIELPQFSIVDYKLITKKVV--FSTGSYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 331
[Close]
BLAST of SMED30008627 vs. Ensembl Mouse
Match: Gabrb2 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620])

HSP 1 Score: 69.3218 bits (168), Expect = 9.526e-12
Identity = 66/270 (24.44%), Postives = 124/270 (45.93%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD-NVKDFK----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEI--KEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L  NV        ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F    +D    N    +   E    S VD ++  K+V+   + G   R +++F  +  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   74 VSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD----NAVTGVTKIELPQFSIVDYKLITKKVV--FSTGSYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 331
[Close]
BLAST of SMED30008627 vs. Ensembl Mouse
Match: Gabrg3 (gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3 [Source:MGI Symbol;Acc:MGI:95624])

HSP 1 Score: 67.781 bits (164), Expect = 2.438e-11
Identity = 65/299 (21.74%), Postives = 119/299 (39.80%), Query Frame = -1 
Query: 1257 IFHVDTVNEHFSAEIFLQSKWREPSLD-----NVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK------KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVST-ELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIP 2117
            I  V ++N  +  +IF    W +  L       +    S  +  +W P    + I++ +K      +  P++       G      +  INA     L+L  FP D     +  S+     +EMI+    N +      +A D + W L+    + ++               +T     SRR GYF +   +   + V+L++ SF +  + T  R  L +  +LT  T      ++LP++ Y+T +D      +F+ +C     AA      ++ TLNY +  R   + +K   +L P
Sbjct:   82 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINA--ECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSV------EAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMD------LFVTVCFLFVFAA----LMEYATLNYYSSCRKPTIRKKKTSLLHP 358
[Close]
BLAST of SMED30008627 vs. Ensembl Mouse
Match: Gabrb1 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 1 [Source:MGI Symbol;Acc:MGI:95619])

HSP 1 Score: 67.0106 bits (162), Expect = 4.667e-11
Identity = 66/286 (23.08%), Postives = 125/286 (43.71%), Query Frame = -1 
Query: 1338 IRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVH--------YPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2150
            + V +R     I  V  VN  ++  ++ Q  W++  L            ++   +LW P  +  N    +K++ V  V         +PD      ++   RI       ++L+++P D Q+ ++ + S   + D++ F  Y N          ++  E    S VD ++     +   G   R +++F  R  R  GYFIL   + S++  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   61 VDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPD----GTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEF--YWN--GGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSF--RLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFF 332
[Close]
BLAST of SMED30008627 vs. UniProt/SwissProt
Match: sp|Q8NCR3|MFI_HUMAN (Protein MFI OS=Homo sapiens OX=9606 GN=MFI PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.736e-54
Identity = 99/263 (37.64%), Postives = 155/263 (58.94%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            ++K+   IQ+ W+S+++  +F+++  LI+ + +G+P  +++ INPKE EL D+A G  V+FRLGG  FPP+IYYKIFTHRPI+DLCANSP+NY ++  K     HNK           WY RIENNGWR +SD     + +D +  E   K   F +   ++ ++   +RK  K++W+R+MY    L+ K                +++T  L+  AT+ +I   E  G   + +W VDE+LNWT+ L+++ Y+  W  +ATS
Sbjct:   12 QDKAARVIQQAWKSFLNVAIFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGIHVRFRLGGVKFPPDIYYKIFTHRPIEDLCANSPRNYAKLPAK--HTSHNKNDHLQEEDHSGWYHRIENNGWRPVSDTFW--LSTDGMVVEDK-KESEFHFSKLKRRQDLEKKRKLRKIEWMRQMYYSGSLEAKST--------------HHETLGLIHTATKGLIRAFEDGGIDSVMEWEVDEVLNWTNTLNFDEYIASWKEIATS 255
[Close]
BLAST of SMED30008627 vs. UniProt/SwissProt
Match: sp|Q9D4W2|MFI_MOUSE (Protein MFI OS=Mus musculus OX=10090 GN=Mfi PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.636e-53
Identity = 96/256 (37.50%), Postives = 152/256 (59.38%), Query Frame = 3 
Query:   96 IQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            IQR W+++++  V++++  LI+ + +G+P  ++R INPKE +L D+A G +V+FRLGG  FPP IYYKIFTHR I+DLCANSP++Y ++  +     HNK           WY+R+ENNGWR +S R    + S  +    S K   F +   ++ ++   +RK  K+ W+R+MY +  L+ K                 N+T  L+ KAT+ +I+++E  G   + +W VDE+LNWT+ L+++ Y+  W   ATS
Sbjct:   19 IQRAWKTFLNVSVYQHFKSLIDLRRQGEPRQIVRYINPKEAQLLDAAAGVQVRFRLGGVRFPPEIYYKIFTHRHIEDLCANSPRDYTKLPAR--YTSHNKDDPPQVEDNSGWYRRVENNGWRPVSYRFWMPLESGVV---DSTKESEFHFSKLKRKQDLEKKRKIKKIDWMRQMYYMGSLEAKATD--------------NETLGLIHKATKGLIKSIEDGGVDSVMEWEVDEVLNWTNTLNFDEYIASWRETATS 255
[Close]
BLAST of SMED30008627 vs. UniProt/SwissProt
Match: sp|Q569B9|MFI_RAT (Protein MFI OS=Rattus norvegicus OX=10116 GN=Mfi PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.458e-51
Identity = 99/256 (38.67%), Postives = 156/256 (60.94%), Query Frame = 3 
Query:   96 IQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            IQ+ W+++++  VF+++  LI+ + +G+P  +++ INPKE EL D+A G +V+FRLGG  FPP IYYKIFTHR I+DLCANSP++Y ++  +     HNK           WY+RIENNGWR +S+R      ++ +    S K   F +   ++ ++   +RK  K++W+R+MY L  L+ K       V D        +T VL+ KAT+ +I+++E  G   + +W VDE+LNWT+ L+++ Y+  W   ATS
Sbjct:   19 IQKAWKTFLNVSVFQHFKSLIDLRRQGEPRQIVKYINPKEAELLDAAAGVQVRFRLGGVKFPPEIYYKIFTHRHIEDLCANSPRDYTKLPAR--YASHNKDDPPQVEDNSGWYRRIENNGWRPVSNRFWMPTENEVL---ESTKESEFHFSKLKRKQDLEKKRKIKKIEWMRQMYYLGSLEAK-------VTD-------RETLVLIHKATKGLIKSIEDGGVDSVMEWEVDEVLNWTNTLNFDDYIASWRETATS 255
[Close]
BLAST of SMED30008627 vs. UniProt/SwissProt
Match: sp|P63138|GBRB2_RAT (Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gabrb2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.892e-11
Identity = 66/270 (24.44%), Postives = 124/270 (45.93%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD-NVKDFK----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEI--KEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L  NV        ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F    +D    N    +   E    S VD ++  K+V+   + G   R +++F  +  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   74 VSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD----NAVTGVTKIELPQFSIVDYKLITKKVV--FSTGSYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 331
[Close]
BLAST of SMED30008627 vs. UniProt/SwissProt
Match: sp|P0C2W5|GBRB2_BOVIN (Gamma-aminobutyric acid receptor subunit beta-2 (Fragment) OS=Bos taurus OX=9913 GN=GABRB2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.053e-11
Identity = 66/270 (24.44%), Postives = 124/270 (45.93%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLD-NVKDFK----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEI--KEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L  NV        ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F    +D    N    +   E    S VD ++  K+V+   + G   R +++F  +  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ M L  +     IFF
Sbjct:   72 VSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD----NAVTGVTKIELPQFSIVDYKLITKKVV--FSTGSYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 329
[Close]
BLAST of SMED30008627 vs. TrEMBL
Match: A0A4E0RSR9 (Uncharacterized protein OS=Fasciola hepatica OX=6192 GN=D915_005714 PE=4 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.673e-77
Identity = 150/373 (40.21%), Postives = 217/373 (58.18%), Query Frame = -1 
Query: 1101 VFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNV-------KDFKSK---------------------EISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRY--TITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEELYCDII 2129
            +FVKI  VDTVNE + A+IFLQ++WREP LD         K+++ K                     +  + WNP++ ++N   E  + V  EV + +    AY++EKRRI  +FHETLELK FPFD QDLS+ V+ + S DE++ V  P ++S+++   A DSQEW +  HVDVE  E+ +  + G  KR    + FT R++RR GYF++N +LIS +  LL+FC F+V  +    RLQ  +++LLT+VTFK A S+NLPKI YLTYLDK VL N FM++ L +WH         +  L    +N         E  ++ +LL  Y     IFGL +Y DAG+RR+LM+ KD+EF +   ++  E+    I+
Sbjct:    3 IFVKIGQVDTVNERYQADIFLQARWREPLLDATWKSERAQKNWRGKSGVENPIQDLVPKRHLHTLGLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPTFEAYLVEKRRIKGVFHETLELKHFPFDVQDLSVTVTCDRSVDEVLLVPSPTEVSQVDRRGAADSQEWKIFHHVDVERMEIQTAYSPGTSKRRHPGLVFTSRSARRSGYFMVNMVLISCVLCLLSFCIFSVPVDGN--RLQQALLLLLTTVTFKFAASQNLPKISYLTYLDKVVLANFFMLVILTVWHTIARSLSASYPKL---LDN---------EKYVVYTLLSSYCLGAVIFGLTVYLDAGSRRRLMQRKDVEFGQLKTRIEREKQRTSIV 361
[Close]
BLAST of SMED30008627 vs. TrEMBL
Match: A0A3R7CFX9 (Neuronal acetylcholine receptor subunit alpha-7 OS=Clonorchis sinensis OX=79923 GN=CHRNA7 PE=4 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.081e-75
Identity = 151/379 (39.84%), Postives = 219/379 (57.78%), Query Frame = -1 
Query: 1101 RVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLD----------NVKDFKSKE------------------ISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRY--TITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEELYCDII 2147
            RV +  +FVKI  VDTVNE + A+IFLQ++WREP LD          N + FK  E                    + WNP++ ++N   E  + V  EV + +    AY++EKRRI  +FHETLELK FPFDCQDLS+ V+ + + +E+  V  P ++S+++   A DSQEW +  HVD+   E+ +  + G  KR    + FT R++RR GYF++N  LIS +  LL+F  F+V  +    RLQL +++LLT+VTFK A S+NLPKI YLTYLDK VL N FM++ L +WH      F  +  L            +  E  ++ +LL  Y     +FGL +Y DAG+RR+LMKSKD++F +   ++  E+ +  I+
Sbjct:   38 RVELMLIFVKIGQVDTVNERYQADIFLQARWREPLLDATWNTSRPRNNFRTFKMVENPVMELAPKRHLHTLKLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPDFEAYLVEKRRIKGVFHETLELKHFPFDCQDLSVTVTCDRTVEEVELVPSPTEVSQVDRRCAADSQEWKIFHHVDIASMEIQTAYSPGTCKRRHPGLVFTSRSARRAGYFMVNMALISCVLSLLSFSVFSVPVDG--NRLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKMVLANFFMLVILTVWHTIARSVFAKYPGL------------KDKEQYVVYTLLSAYCLGAVVFGLTVYLDAGSRRRLMKSKDMDFTQHKQRIELEKQHKSIV 402
[Close]
BLAST of SMED30008627 vs. TrEMBL
Match: R7V9E8 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_228976 PE=4 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.675e-75
Identity = 139/322 (43.17%), Postives = 198/322 (61.49%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQV--RRKDPRQLHNKYQISI-----SNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDW----KLDLLKSKPNNDTDRSMFY----TDCINPSIVDF-QSQ*IVLF 992
            KE++   IQR WR +ID QVFKYY  LINF+ +GDP++MLRCINP E +L D+A G  +KFRL G+ FPPNIYYKIFTHRPIQDLCANSPK+Y +V  +R   R +HNK +  I           WY+R+ENNGWR +SDR++   FSDP+T+E+S K   F +D  ++ ++   ++KK K+ W++KMY   +L  K              +D  +T  L++ A   M  T++ +G + I +W VDELL+WT+ L+++ YL+ W  LATS  S+     +L LL + P      +++     T    P I DF QS  +V++
Sbjct:   21 KEEASKVIQRAWRRHIDVQVFKYYRDLINFRQRGDPSLMLRCINPNEAKLMDAAMGIHIKFRLAGERFPPNIYYKIFTHRPIQDLCANSPKDYTRVNTKRLAARSVHNKGEGQIKAKLPGKDCVGWYQRLENNGWRLVSDRLINHAFSDPVTWETSIKKTEFVHDKLKRRQDVEKKKKKRKIDWMQKMYKQGMLQAK--------------VDDRETIDLIEGAAAGMFATVDSQGPEAIAEWEVDELLDWTTSLNFDEYLSGWRQLATSAPSEGPAEERLKLLTADPYELNFGNVYQKAENTTQPQPEICDFMQSNLVVIY 328
[Close]
BLAST of SMED30008627 vs. TrEMBL
Match: A0A2C9JCJ1 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106077424 PE=4 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.293e-75
Identity = 124/266 (46.62%), Postives = 179/266 (67.29%), Query Frame = 3 
Query:   81 KSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQIS--ISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVS 872
            ++ +KIQR WR +ID QV+KYY  LINFK +GDP+ MLRCINP E +L D+A G  ++FRL G+ FPPNIYYKIFT+RPIQDLCANSPK+Y Q ++  P+  H+  ++     +  + WYKRIENNGWR +SDR++  I +DP+T+E+S K   F++    + ++   ++K  K+KW++K+Y+  LL  K +      E++TQ         L++ AT  MI T+E +G   +E+W VDELL WT+GL+++ Y + W  LATS  S
Sbjct:   93 QAAVKIQRAWRRHIDIQVYKYYRDLINFKCRGDPSAMLRCINPNEAKLLDAAAGINIRFRLAGEKFPPNIYYKIFTNRPIQDLCANSPKDYTQSKKLTPKDTHSHVRVPKIQEDDKQGWYKRIENNGWRLVSDRLIHHILNDPVTWETSRKEYKFDHSRLNRRQDVERRKKXEKIKWMQKLYSQGLLKTKADD-----EETTQ---------LIEGATAGMIATIESQGVDALENWEVDELLAWTTGLNFDEYRDTWRELATSSSS 344
[Close]
BLAST of SMED30008627 vs. TrEMBL
Match: H3AGU7 (Uncharacterized protein OS=Latimeria chalumnae OX=7897 GN=LOC102347917 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 6.526e-73
Identity = 127/265 (47.92%), Postives = 172/265 (64.91%), Query Frame = 3 
Query:   75 KEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQ--VRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATS 863
            +E +   IQR WR  ID  VFK+Y  LINF+ KGDP ++LRCINP+E EL D+A G  V+FRLGG  FPPNIYYKI+THRPI D+CANSPK+Y +  V++  P+QLHN  ++   +    WYKRIENNGWR I++R+L   F DPIT E+  K   F +   R+ +    +RK+ K+ W++KMY   +L+              Q +D N T VL+++ATE M+  ++ KG   + +W VDELL WT+ L+YE YLN W  +ATS
Sbjct:   15 REVAATIIQRAWRKCIDIHVFKFYKSLINFRLKGDPRLLLRCINPREAELLDAAAGIHVRFRLGGIKFPPNIYYKIYTHRPIVDMCANSPKDYTKFCVKQPLPKQLHNVGKLP-KDDYSGWYKRIENNGWRLITNRILK--FLDPITTETIEKRTEFHHSRLRRRQEVERKRKRRKIDWMKKMYQKGILE-------------AQTMDLN-TAVLIQRATEGMMSAVDHKGPDVVMEWEVDELLEWTNSLNYEEYLNSWKEIATS 262
[Close]
BLAST of SMED30008627 vs. Ensembl Cavefish
Match: ENSAMXT00000014478.2 (chromosome 3 C11orf65 homolog [Source:NCBI gene;Acc:103027092])

HSP 1 Score: 206.068 bits (523), Expect = 1.229e-59
Identity = 104/274 (37.96%), Postives = 162/274 (59.12%), Query Frame = 3 
Query:   72 IKEKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQV--RRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLD 887
            + +++   IQR WR ++D  VFKY   L+NF+N+GDP  +L+C+ P+E ++ D+A G  ++FRLGG  FPPNIYYKIFTH PI DLC +SP++Y  V  RR  P Q+HN  Q  + +    WY+RIENN WR +S ++      DP T  ++ K   F +    + ++   ++K  K++W++KMY    L    +T+ KE            T  LV+ A + ++  + ++G   + +W VDEL+ WT+ L+++ YLN+W  L TS  S  + D
Sbjct:   47 VYDRAARVIQRTWRRHVDIAVFKYIKSLVNFRNQGDPRFLLKCVKPREADMLDAASGVYIRFRLGGTTFPPNIYYKIFTHHPIVDLCTSSPRDYTHVGQRRPVPIQIHNG-QPVVQDDRSGWYRRIENNSWRLLSGKIYPH--GDPTTQNTNNKRSEFHHCRIHRKQDVERKKKIRKIEWMKKMYGEGAL--HAHTEHKE------------TAQLVENAMQVIMRAVLQQGVDSVLEWEVDELIEWTNALNFDEYLNEWKDLGTSNTSALRKD 303
[Close]
BLAST of SMED30008627 vs. Ensembl Cavefish
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4-like [Source:NCBI gene;Acc:103032374])

HSP 1 Score: 69.707 bits (169), Expect = 5.046e-12
Identity = 59/264 (22.35%), Postives = 114/264 (43.18%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            +  VN  ++  ++ Q  WR+  L  V+        ++   +LW P  +  N  K     V  +           ++   RI       ++L+++P D Q+ ++ + S   + D+++F          N    +D  E    S V++ +         G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     +FF
Sbjct:   75 ISEVNMDYTITMYFQQSWRDKRLAYVEMPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGK----NAVTGVDKLELPQFSIVELHLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFF 332
[Close]
BLAST of SMED30008627 vs. Ensembl Cavefish
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4-like [Source:NCBI gene;Acc:103032374])

HSP 1 Score: 69.3218 bits (168), Expect = 6.841e-12
Identity = 59/264 (22.35%), Postives = 114/264 (43.18%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            +  VN  ++  ++ Q  WR+  L  V+        ++   +LW P  +  N  K     V  +           ++   RI       ++L+++P D Q+ ++ + S   + D+++F          N    +D  E    S V++ +         G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     +FF
Sbjct:   75 ISEVNMDYTITMYFQQSWRDKRLAYVEMPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGK----NAVTGVDKLELPQFSIVELHLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFF 332
[Close]
BLAST of SMED30008627 vs. Ensembl Cavefish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230])

HSP 1 Score: 68.1662 bits (165), Expect = 1.276e-11
Identity = 61/268 (22.76%), Postives = 123/268 (45.90%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L            ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F  Y  + S +   D I+  ++ +  +  +  K V +    G   R +++F  +  R  GYFIL   + S++  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   61 VSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPDTYFIN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEF--YWQEGSSVTGVDNIELPQFSIIDYKTLSKKVVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFF 317
[Close]
BLAST of SMED30008627 vs. Ensembl Cavefish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:NCBI gene;Acc:103030074])

HSP 1 Score: 67.3958 bits (163), Expect = 2.129e-11
Identity = 72/290 (24.83%), Postives = 122/290 (42.07%), Query Frame = -1 
Query: 1299 IFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFK-----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK------KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYP-NDISKLNLSDAI---DSQEWDLHSHVDVEIKEV--ISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENR 2117
            I  VD +N  ++ +IF    W +  L      K     S  + K+W P    +  ++ ++++    +  P++       G      +  INA  +  L+L  FP D     +  S+           YP N+I     S A+   D + W L+    V ++    I+    G     +I FT   SRR GYF +   +  SM V+L++ SF +  +    R  L +  +LT  T      ++LPK+ Y+T +D      +F+ +C     AA      ++ TL+Y T NR
Sbjct:   89 IGPVDPINMEYTIDIFFAQSWYDSRLQFNSSMKVLMLNSNMVGKIWIP----DTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECY--LKLHNFPMDEHSCPLEFSS---------YGYPKNEIEYKWHSRAVQVADQRYWRLYQFAFVGLQNTTGIAHTQSGDYVVMSILFTL--SRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD------LFVSVCFIFTFAA----LMEYGTLHYFTSNR 351
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BLAST of SMED30008627 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006877.1 (pep scaffold:Pmarinus_7.0:GL476643:905844:919619:1 gene:ENSPMAG00000006214.1 transcript:ENSPMAT00000006877.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 151.369 bits (381), Expect = 2.000e-41
Identity = 97/271 (35.79%), Postives = 142/271 (52.40%), Query Frame = 3 
Query:   78 EKSILKIQRFWRSYIDKQVFKYYCKLINFKNKGDPAMMLRCINPK-EIELFDSAFGARVKFRLGGQVFPPNIYYK-IFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTED---WYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSD 875
            ++S + IQR WR YID QVF+YY +L++F+  G+P +MLRC+NP  + EL D A GA V+FRLGG     N++ + IFTHRP+QDLCANSPK Y     K         + S+ +   D   WYKR+ENNGWR +S+R+  +   D I  +++     F    R++     ++R++ +++WLRK+Y        E  Q                     +A  S        G     D  +++LL WT  L +E Y+N W  L T+  SD
Sbjct:   17 QRSAIVIQRAWRRYIDLQVFRYYRELLSFRASGEPRLMLRCVNPNVQAELLDGAAGAHVRFRLGGVEEARNLWLRSIFTHRPVQDLCANSPKEYASAAVK----TLPARERSVRDPDPDRSGWYKRVENNGWRLVSERVSGQ--RDNIFKKTNRSAAPFSPSRRQRRHESSSRRRRRQIQWLRKLY--------EGGQ---------------------QAPASCGSEGTAPGPPV--DSELEDLLTWTKALDFEEYINGWKELGTTNTSD 250
[Close]
BLAST of SMED30008627 vs. Ensembl Sea Lamprey
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:ZFIN;Acc:ZDB-GENE-101102-2])

HSP 1 Score: 58.151 bits (139), Expect = 2.111e-9
Identity = 37/128 (28.91%), Postives = 64/128 (50.00%), Query Frame = -1 
Query: 1272 GPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIE 1655
            G   R +++F  R  R  GYFIL   + S++  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D      I+++ C C    A      ++  +NYI   R  ++ +K E
Sbjct:   46 GSYPRLSLSF--RLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAID------IYLMGCFCFVFLA----LLEYALVNYIFFGRGPQLQKKAE 161
[Close]
BLAST of SMED30008627 vs. Ensembl Sea Lamprey
Match: glra2 (glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1])

HSP 1 Score: 57.3806 bits (137), Expect = 6.632e-9
Identity = 57/275 (20.73%), Postives = 115/275 (41.82%), Query Frame = -1 
Query: 1302 FSAEIFLQSKWREPSL------DNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRY-TITFTC-----RASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITEN 2087
            +   IFL+ +W +P L      D+  D     +  +W P +   N    N   V  +           ++   R+       ++LK FP D Q  ++ + S   + +++IF E+  +   + +++ +   ++ L    D+          +   K Y T  FTC        R+ GY+++   + S + V+L++ SF +  +    R+ L +  +LT  T       +LPK+ Y+  +D      I+M +CL    AA      ++  +N+++  
Sbjct:   27 YRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIF-EWKQE-GAVQVAEGLTLPQFVLKDEKDL----------VYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAID------IWMAVCLLFVFAA----LLEYAAVNFVSRQ 279
[Close]
BLAST of SMED30008627 vs. Ensembl Sea Lamprey
Match: glra4a (glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3])

HSP 1 Score: 53.9138 bits (128), Expect = 8.424e-8
Identity = 60/273 (21.98%), Postives = 119/273 (43.59%), Query Frame = -1 
Query: 1410 VYIRC-VFVKIFH-VDTVNEHFSAEIFLQSKWREPSLDNV----------KDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKR---------RINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTI-TFTCRAS-----RRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLD 2144
            V + C + VK F  V+     +S  IFL+  W +P + NV           D  +  +  +W P     +++ EN+++   ++ Y    G  YM             R++ +    + L+ +P D Q  SI + S   + +++IF    ND   ++    + + ++ L +      +  + +C     K YT  TF+C  +     R  GY+++   + S + V++++ SF +       R+ L +  +LT  T   + +  LPK+ Y+  +D
Sbjct:   69 VVVNCSILVKGFGPVEEATMDYSINIFLRQTWNDPRILNVLKSIEYNTDFLDLGNSFVDSVWKP-----DLFFENEKSAAFQM-YQLVTGFKYMYTFAMWITCFLCFRLSLVLACPMSLEVYPMDAQYCSIYLESYGYTTNDLIFQW--NDTEPVSFGAGVSTPKFTLSN------ETFLGECT----KEYTYGTFSCVKATFFLDRDMGYYLIQVYIPSCLLVIISWLSFWLNVEAAPARVGLGITTILTVTTQMTSANAALPKVSYIKAID 323
[Close]
BLAST of SMED30008627 vs. Ensembl Sea Lamprey
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:ZFIN;Acc:ZDB-GENE-101102-2])

HSP 1 Score: 52.373 bits (124), Expect = 1.621e-7
Identity = 34/126 (26.98%), Postives = 61/126 (48.41%), Query Frame = -1 
Query: 1278 GPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRK 1655
            G   R +++F  R  R  GYFIL   + + +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D      I+++ C C    A      ++  +NY+   R  +  +K
Sbjct:   67 GSYPRLSLSF--RLKRNIGYFILQTYMPTILITILSWVSFWINYDASAARVALGVTTVLTMTTISTHLRETLPKIPYVKAID------IYLMGCFCFVFLA----LLEYAAVNYLFFGRGPQRAKK 180
[Close]
BLAST of SMED30008627 vs. Ensembl Nematostella
Match: EDO32790 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU26])

HSP 1 Score: 117.087 bits (292), Expect = 3.483e-28
Identity = 81/265 (30.57%), Postives = 134/265 (50.57%), Query Frame = -1 
Query: 1380 QIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIF---VEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKR----YTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMI 2153
            ++ V IRC    +  +D + + F+ E+++ + WREP L   K+ + K  ++ W+PKI   N    ++    R ++Y +        E  +I   F E   L+QFP D Q+LSI++S++ S   + F   +  P+ + +   S   D   W L+ HV  +      +  +GP  R    Y IT   R  RR  ++  N  ++ S+   L+F SFA+    T  RL + +++LL SV +K   S +LP+  YLT+LDK  LGN+  I
Sbjct:   15 KVTVLIRCGISFLGDIDVIRQQFTCELWMTASWREPKLAGKKNEEVKWDNE-WSPKISFSNSLLLDRVYKGRRLYYEENSTVPLAQEVYKIRGTFKEQFSLEQFPVDLQELSIIISSDWSDRTVTFEKDMAKPDYLRQQTFSSPRD---WVLYPHVHTDTATQEGE-GLGPNDRSYPVYIITAHVR--RRAVHYFWNTAVVMSVLTALSFASFAIPPQQTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFI 272
[Close]
BLAST of SMED30008627 vs. Ensembl Nematostella
Match: EDO35410 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK4])

HSP 1 Score: 66.6254 bits (161), Expect = 7.693e-12
Identity = 60/274 (21.90%), Postives = 122/274 (44.53%), Query Frame = -1 
Query: 1371 KKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLD------NVKDFKSKEISK-LWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFV--EYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCL 2162
            K   + VY+      I+ +  +N  F+ +I+L+  WR+  L             S +I+K +W P  +     K     V  + +    K    +    R+       L+L+ FP D Q  S+ + S    + ++++V  E  ++ S + + D ++  ++++   + V     ++  NIG        F  R  RR GYF+++  + S++ V++++ SF +       R+ L +  +LT  T   +   NLPK+ Y+  +D       ++++CL
Sbjct:   42 KGEPVVVYVDMYVSNIWAMQEMNMDFTIDIYLRQYWRDERLQFETQTPGAMLTLSSDINKQIWVPSTYFLATKKAYFHDVTTDNYLLQVKPDGSLFYSIRLTITTSCRLDLRDFPHDTQSCSLSLESYGYQSTDVLYVWNERLDNTSAIYIHDDLELPQFEV---LGVSRSAKMNKYNIGNHSSLVANF--RMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLTMTTLISSARANLPKVSYVKAID------WYLLLCL 304
[Close]
BLAST of SMED30008627 vs. Ensembl Nematostella
Match: EDO43147 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZH2])

HSP 1 Score: 64.6994 bits (156), Expect = 2.310e-11
Identity = 61/258 (23.64%), Postives = 113/258 (43.80%), Query Frame = -1 
Query: 1380 KIFHVDTVNE---HFSAEIFLQSKWREPSLDN--VKDFK-SKEISKL-WNPKIHIENIYKENKQTVVRE----VHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMI 2120
            K+  +  +NE    FS +IF +  W EP   +   + F  +++  KL W P  +  N  K N   V +E    + YP   G+ Y     R+       + L+ FP D Q   + + +     E I  ++    +K      I S E      V+   +++ +    G   +   TF+ +  RR  YF +  +  + + V+L++C F ++ +    R+ L +  +L+++     V+  +PK+ Y+  +D  VLGN   I
Sbjct:   35 KVVSLGGINEASMEFSMDIFFRQWWHEPRFTHNYSEPFTMAEDAGKLFWIPDTYFINAKKSNFHKVTKENARIIIYPS--GNVYY--SVRLTLTLQCNMNLQLFPMDVQACPLFIESYAYTSEDIKYKWTPRGTK---GIEIISNETAQFVLVEARTEQIATAKISGHFSQLVATFSLK--RRLEYFAITVVTPAMILVVLSWCCFWIVPDAIPARISLSVTTILSTLLLSGTVNAQMPKVSYMKAIDVFVLGNFAFI 283
[Close]
BLAST of SMED30008627 vs. Ensembl Nematostella
Match: EDO49734 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFJ5])

HSP 1 Score: 62.7734 bits (151), Expect = 1.388e-10
Identity = 59/239 (24.69%), Postives = 106/239 (44.35%), Query Frame = -1 
Query: 1437 KIFHVDTVNEHFSAEIFLQSKWREPSLD-NVKDFKS-----KEISKLWNPKIHIENIYKENKQTVVREVHYPDK---KGSAYMIEKRRINAIFHET--LELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLP 2120
            +I  VD  N    A  +L+ KW  PSL  N  +F        E  +LW P I + N   + K  +     Y  K   +    MI      A+FH    ++++ FPFD Q   +  ++ +     +  E   D ++  + D   ++EW++   + ++ K +   C   P +  TIT +    RR  Y+I+N +   S+   +T+ +F ++   +  R+ LC+ +L+    F+   S  LP
Sbjct:   39 RIAAVDEKNNVVLAHWYLKQKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYN-NADPKNDLAGGFQYKTKIEMQADGTMI--WLAPAMFHSACPMDIRYFPFDEQSCDLQFASWMYDTSKL--EMKIDANETKVMDTFTNKEWEI-PKLTIKKKRIKYTCCPNPYEDVTITMSL--VRRPYYYIMNMIFPCSLIACMTYLTF-ILPAESGERISLCITVLMAMSIFQELTSNKLP 268
[Close]
BLAST of SMED30008627 vs. Ensembl Nematostella
Match: EDO45564 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSH5])

HSP 1 Score: 62.3882 bits (150), Expect = 2.040e-10
Identity = 70/319 (21.94%), Postives = 136/319 (42.63%), Query Frame = -1 
Query: 1281 DKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLD-NVKDFKSKE-----ISKLWNPKIHIEN---------IYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPK----IPYLTYLDKAVLGNI---FMIMCLCM--WHAATSIFFYDFKTLNYITENRVLEVIR 2165
            +K   +RV +   + ++  +D  N+  S++++++  WR P L  N  D+   E      + +W P I + N         +Y  + + V+      D  G+        I +I    +++  FPFD Q   I+  +        ++   N  ++ +LS    S EW+L S   V      S C         +T+T    R+  +++ N +L   +  +LT CSF ++   +  R+ L + ILL    F +  +E++P+    IP +     AV+  +    ++ C+ M  +H  + +       + YI  N +  V+R
Sbjct:   22 NKSEAVRVSLDIAYSQLIDLDGKNQILSSKVWIRQVWRNPFLSWNPDDYGGLESINVNSNLVWKPDIILYNNIGIGQTGAMYNFDTKVVI------DSDGTNSWYAPTEIKSICQ--IDITYFPFDAQSCPIIFGSWTYTGN--YLNLVNARNQSDLSKYTISGEWELKSAPVVRNVVKYSCCK---HPYIDVTYTINIRRKVLFYLNNLILPCMVLAILTVCSF-LLPPASGERISLVITILLGLTVFMLVFTESVPRTSEVIPLIAKYSFAVMCEVAVSLLLTCVVMRIYHKNSPMPL----PMRYIVYNILAPVLR 322
[Close]
BLAST of SMED30008627 vs. Ensembl Medaka
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:NCBI gene;Acc:101154825])

HSP 1 Score: 69.707 bits (169), Expect = 5.087e-12
Identity = 60/268 (22.39%), Postives = 119/268 (44.40%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L            ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F  Y    S       +++ E    S +D +     +    G   R +++F  +  R  GYFIL   + S++  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   72 VSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPDTYFIN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEF--YWQGGSNAGSVTGVENIELPQFSIIDYQTLSTKAVFATGSYPRLSLSFKLK--RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFF 331
[Close]
BLAST of SMED30008627 vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169])

HSP 1 Score: 68.1662 bits (165), Expect = 1.592e-11
Identity = 60/281 (21.35%), Postives = 123/281 (43.77%), Query Frame = -1 
Query: 1338 IRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2150
            +RV +      I  V  VN  ++  ++ Q  WR+  L   +        ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + +     + I   +   +  +   + I+  ++ +  H  +    V S    G   R +++F  +  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   61 VRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVGAVTGVERIELPQFSIVDHKLISKNVVFS---TGAYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFF 332
[Close]
BLAST of SMED30008627 vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169])

HSP 1 Score: 67.781 bits (164), Expect = 2.155e-11
Identity = 60/281 (21.35%), Postives = 123/281 (43.77%), Query Frame = -1 
Query: 1338 IRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2150
            +RV +      I  V  VN  ++  ++ Q  WR+  L   +        ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + +     + I   +   +  +   + I+  ++ +  H  +    V S    G   R +++F  +  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   56 VRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVGAVTGVERIELPQFSIVDHKLISKNVVFS---TGAYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFF 327
[Close]
BLAST of SMED30008627 vs. Ensembl Medaka
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:NCBI gene;Acc:101155813])

HSP 1 Score: 67.0106 bits (162), Expect = 3.325e-11
Identity = 66/282 (23.40%), Postives = 115/282 (40.78%), Query Frame = -1 
Query: 1299 VDTVNEHFSAEIFLQSKWREPSLDNVKDFK-----SKEISKLWNPKIHIENIYKENKQTVVREVHYPDK------KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTI-TFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENR 2108
            VD +N  ++ +IF    W +  L      K     S  + K+W P    +  ++ ++++    +  P++       G      +  INA  +  L+L  FP D     +  S+       I   +     +    +  D + W L+    V ++   SD        Y I T     SRR GYF +   +  SM V+L++ SF +  +    R  L +  +LT  T      ++LPK+ Y+T +D      +F+ +C     AA      ++ TL+Y T NR
Sbjct:   91 VDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIP----DTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECY--LKLHNFPMDEHSCPLEFSSYGYPRNEIMYRW-----QRRAVEVADQRYWRLYQFAFVGMRNT-SDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYITAMD------LFVSVCFIFTFAA----LMEYGTLHYFTSNR 350
[Close]
BLAST of SMED30008627 vs. Ensembl Medaka
Match: gabrb3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:101165384])

HSP 1 Score: 65.855 bits (159), Expect = 7.795e-11
Identity = 61/268 (22.76%), Postives = 118/268 (44.03%), Query Frame = -1 
Query: 1338 VDTVNEHFSAEIFLQSKWREPSLDNVK-----DFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDK----KGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVV-STELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGN-IFMIMCLCMWHAATSIFF 2108
            V  VN  ++  ++ Q  WR+  L  +         ++   +LW P  +  N    +K++ V  V   ++         ++   RI       ++L+++P D Q+ ++ + S   + D++ F     D +       +   E    S VD ++       + G   R +++F  R  R  GYFIL   + S +  +L++ SF +  + +  R+ L +  +LT  T    + E LPKIPY+  +D  ++G  +F+ + L  +     IFF
Sbjct:   96 VSEVNMDYTLTMYFQQYWRDKRLAYLGIPLNLTLDNRVADQLWVPDTYFLN----DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTA----VTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLR--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 353
[Close]
BLAST of SMED30008627 vs. Planmine SMEST
Match: SMESG000041696.1 (SMESG000041696.1)

HSP 1 Score: 729.939 bits (1883), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = -1 
Query: 1101 MDKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEELYCDII 2168
            MDKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEELYCDII
Sbjct:    1 MDKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEELYCDII 356
[Close]
BLAST of SMED30008627 vs. Planmine SMEST
Match: SMESG000041685.1 (SMESG000041685.1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 3 
Query:  186 MMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSKPNNDTDRSMFYTDCINPSIVDFQSQ 977
            MMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSKPNNDTDRSMFYTDCINPSIVDFQSQ
Sbjct:    1 MMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSKPNNDTDRSMFYTDCINPSIVDFQSQ 264
[Close]
BLAST of SMED30008627 vs. Planmine SMEST
Match: SMESG000041685.1 (SMESG000041685.1)

HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 3 
Query:  189 MLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSKPNNDTDRSMFYTDCINPSIVDFQSQ 977
            MLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSKPNNDTDRSMFYTDCINPSIVDFQSQ
Sbjct:    1 MLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKIFTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENNGWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLKWLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLEKKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSKPNNDTDRSMFYTDCINPSIVDFQSQ 263
[Close]
BLAST of SMED30008627 vs. Planmine SMEST
Match: SMESG000041740.1 (SMESG000041740.1)

HSP 1 Score: 514.998 bits (1325), Expect = 1.048e-178
Identity = 233/348 (66.95%), Postives = 298/348 (85.63%), Query Frame = -1 
Query: 1104 RVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEELYCDI 2147
            RV+IRCVF+KIF VDTVNE+++AEIFLQ+KWREP LDN  + K+ ++SK WNP++ IEN++KEN +TV+ EV Y +K+G A++++KRR+ AIFHETLEL QFPFDCQDLS+ VS+E S+DE+  VE+P DISKLN SDA++SQEWDLHSHVDVEIK +I+DCNIGP++R +ITFTCRA RRFGYF++NH LIS MF  LTFCSF+VIS+NT GRLQLCMI LLTSVTFKVAVS NLPK+PYLTYLDKA+LGNIFMIMCLC+WHAATS++FYD  TL  I ++  +E ++++E  LIP+LL+FY+ ++ +F L+IYFDAG+RR+ M  KDIEFE+KI ++ NEE +CD+
Sbjct:   15 RVFIRCVFLKIFQVDTVNEYYNAEIFLQAKWREPILDNKLETKNIDLSKFWNPRLVIENLFKENNETVLLEVSYVEKEGVAFVVQKRRVKAIFHETLELNQFPFDCQDLSVTVSSEYSSDEVELVEFPTDISKLNSSDAVESQEWDLHSHVDVEIKRIITDCNIGPKERTSITFTCRAGRRFGYFLVNHFLISCMFFFLTFCSFSVISSNTFGRLQLCMITLLTSVTFKVAVSNNLPKVPYLTYLDKAILGNIFMIMCLCLWHAATSVYFYDSTTLQSINDSIAIEKVKQVEKYLIPALLIFYVTAVVVFALVIYFDAGSRRREMHLKDIEFEQKIKRLKNEERFCDL 362
[Close]
BLAST of SMED30008627 vs. Planmine SMEST
Match: SMESG000064442.1 (SMESG000064442.1)

HSP 1 Score: 460.299 bits (1183), Expect = 1.642e-157
Identity = 224/353 (63.46%), Postives = 271/353 (76.77%), Query Frame = -1 
Query: 1119 SK*MDKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFKSKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIFHETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQEWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLISSMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLTYLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEMILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEE 2177
            SK + KK QI V IRCVFVKI  VDTVNE + A+IFLQSKWREP LD   D    ++  LWNPK+ +EN+YKEN+ T   EV++PD K  AY+IEKRRIN  FHETLELKQFPFDCQDLSI VS+E S +E+  +E   D+S LN+S  ++SQEW++HSHV+V    V+++CNIGP+ +  I FTCRASRRF YF++NH+LIS M  LLTFCSFAV+  NTHGRLQLCMIILLT+VTFKVAVS+NLPKIPYLTYLDKA+LGNIF+IMCLC+WHA TSIFF     LN   +   +E IRKIE  +IP LL  Y+ +IF+FGL IYFDAG RR+LMK KD+EF KK+     E+
Sbjct:    5 SKLIQKKEQIPVEIRCVFVKICQVDTVNEVYYADIFLQSKWREPLLDKSLD-SQVDLKNLWNPKLFVENLYKENQNTTSLEVYFPDGKDGAYVIEKRRINGTFHETLELKQFPFDCQDLSITVSSECSIEEVDLLESKTDLSTLNVSSEVESQEWNIHSHVEVSTMTVVTNCNIGPQMQRIIVFTCRASRRFRYFLINHILISVMLCLLTFCSFAVVPTNTHGRLQLCMIILLTTVTFKVAVSQNLPKIPYLTYLDKAILGNIFVIMCLCLWHALTSIFF-----LNQNLQKSKIENIRKIECFIIPILLTSYIMAIFVFGLAIYFDAGKRRRLMKLKDLEFGKKLKSCKKED 351
The following BLAST results are available for this feature:
BLAST of SMED30008627 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
C11orf653.614e-5537.64chromosome 11 open reading frame 65 [Source:HGNC S... [more]
C11orf653.614e-5537.64chromosome 11 open reading frame 65 [Source:HGNC S... [more]
C11orf653.614e-5537.64chromosome 11 open reading frame 65 [Source:HGNC S... [more]
C11orf653.614e-5537.64chromosome 11 open reading frame 65 [Source:HGNC S... [more]
C11orf654.533e-3437.24chromosome 11 open reading frame 65 [Source:HGNC S... [more]
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BLAST of SMED30008627 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
glc-31.375e-822.77Glutamate-gated ChLoride channel; Glutamate-gated ... [more]
glc-42.527e-721.90Glutamate-gated ChLoride channel [Source:UniProtK... [more]
glc-17.659e-719.81Glutamate-gated chloride channel alpha [Source:Un... [more]
glc-17.659e-719.81Glutamate-gated chloride channel alpha [Source:Un... [more]
lgc-358.000e-722.83Ligand-Gated ion Channel [Source:UniProtKB/TrEMBL... [more]
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BLAST of SMED30008627 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CG69274.349e-1122.10gene:FBgn0029733 transcript:FBtr0070721[more]
pHCl-29.187e-921.84gene:FBgn0039840 transcript:FBtr0347502[more]
pHCl-29.187e-921.84gene:FBgn0039840 transcript:FBtr0085766[more]
HisCl19.217e-922.06gene:FBgn0037950 transcript:FBtr0082471[more]
CG89169.856e-921.90gene:FBgn0030707 transcript:FBtr0301233[more]
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BLAST of SMED30008627 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gabrb41.848e-1222.35gamma-aminobutyric acid type A receptor beta4 subu... [more]
gabrb42.651e-1222.35gamma-aminobutyric acid type A receptor beta4 subu... [more]
gabrb11.759e-1122.76gamma-aminobutyric acid type A receptor beta1 subu... [more]
gabrg13.214e-1123.26gamma-aminobutyric acid type A receptor gamma1 sub... [more]
gabrg13.448e-1123.26gamma-aminobutyric acid type A receptor gamma1 sub... [more]
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BLAST of SMED30008627 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
helq1.955e-6540.75helicase, POLQ like [Source:Xenbase;Acc:XB-GENE-99... [more]
ENSXETT00000004017.12.157e-1122.97gamma-aminobutyric acid (GABA) A receptor, beta 1 ... [more]
gabrb22.526e-1123.05gamma-aminobutyric acid (GABA) A receptor, beta 2 ... [more]
gabrb22.667e-1123.05gamma-aminobutyric acid (GABA) A receptor, beta 2 ... [more]
gabrb23.110e-1123.05gamma-aminobutyric acid (GABA) A receptor, beta 2 ... [more]
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BLAST of SMED30008627 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
4930550C14Rik2.338e-5437.50RIKEN cDNA 4930550C14 gene [Source:MGI Symbol;Acc:... [more]
Gabrb26.993e-1224.44gamma-aminobutyric acid (GABA) A receptor, subunit... [more]
Gabrb29.526e-1224.44gamma-aminobutyric acid (GABA) A receptor, subunit... [more]
Gabrg32.438e-1121.74gamma-aminobutyric acid (GABA) A receptor, subunit... [more]
Gabrb14.667e-1123.08gamma-aminobutyric acid (GABA) A receptor, subunit... [more]
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BLAST of SMED30008627 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q8NCR3|MFI_HUMAN1.736e-5437.64Protein MFI OS=Homo sapiens OX=9606 GN=MFI PE=1 SV... [more]
sp|Q9D4W2|MFI_MOUSE1.636e-5337.50Protein MFI OS=Mus musculus OX=10090 GN=Mfi PE=1 S... [more]
sp|Q569B9|MFI_RAT1.458e-5138.67Protein MFI OS=Rattus norvegicus OX=10116 GN=Mfi P... [more]
sp|P63138|GBRB2_RAT4.892e-1124.44Gamma-aminobutyric acid receptor subunit beta-2 OS... [more]
sp|P0C2W5|GBRB2_BOVIN6.053e-1124.44Gamma-aminobutyric acid receptor subunit beta-2 (F... [more]
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BLAST of SMED30008627 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E0RSR91.673e-7740.21Uncharacterized protein OS=Fasciola hepatica OX=61... [more]
A0A3R7CFX91.081e-7539.84Neuronal acetylcholine receptor subunit alpha-7 OS... [more]
R7V9E81.675e-7543.17Uncharacterized protein OS=Capitella teleta OX=283... [more]
A0A2C9JCJ17.293e-7546.62Uncharacterized protein OS=Biomphalaria glabrata O... [more]
H3AGU76.526e-7347.92Uncharacterized protein OS=Latimeria chalumnae OX=... [more]
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BLAST of SMED30008627 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000014478.21.229e-5937.96chromosome 3 C11orf65 homolog [Source:NCBI gene;Ac... [more]
gabrb45.046e-1222.35gamma-aminobutyric acid receptor subunit beta-4-li... [more]
gabrb46.841e-1222.35gamma-aminobutyric acid receptor subunit beta-4-li... [more]
gabrb11.276e-1122.76gamma-aminobutyric acid type A receptor beta1 subu... [more]
gabrg12.129e-1124.83gamma-aminobutyric acid type A receptor gamma1 sub... [more]
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BLAST of SMED30008627 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000006877.12.000e-4135.79pep scaffold:Pmarinus_7.0:GL476643:905844:919619:1... [more]
gabrb32.111e-928.91gamma-aminobutyric acid type A receptor beta3 subu... [more]
glra26.632e-920.73glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GEN... [more]
glra4a8.424e-821.98glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GE... [more]
gabrb31.621e-726.98gamma-aminobutyric acid type A receptor beta3 subu... [more]
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BLAST of SMED30008627 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30008627 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO327903.483e-2830.57Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO354107.693e-1221.90Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO431472.310e-1123.64Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO497341.388e-1024.69Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO455642.040e-1021.94Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30008627 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gabrb15.087e-1222.39gamma-aminobutyric acid type A receptor beta1 subu... [more]
GABRB21.592e-1121.35gamma-aminobutyric acid receptor subunit beta-2 [S... [more]
GABRB22.155e-1121.35gamma-aminobutyric acid receptor subunit beta-2 [S... [more]
gabrg13.325e-1123.40gamma-aminobutyric acid type A receptor gamma1 sub... [more]
gabrb37.795e-1122.76gamma-aminobutyric acid type A receptor beta3 subu... [more]
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BLAST of SMED30008627 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000041696.10.000e+0100.00SMESG000041696.1[more]
SMESG000041685.10.000e+0100.00SMESG000041685.1[more]
SMESG000041685.10.000e+0100.00SMESG000041685.1[more]
SMESG000041740.11.048e-17866.95SMESG000041740.1[more]
SMESG000064442.11.642e-15763.46SMESG000064442.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30008627 ID=SMED30008627|Name=SMED30008627|organism=Schmidtea mediterranea sexual|type=transcript|length=2183bp
TCTATATAAATCTTATATGGTTGGTTAACTATTTTTATAATATTCAAAAT
ATGGATGATATAAATGAAGTTATTAAAGAGAAATCTATTTTAAAAATTCA
ACGTTTTTGGCGTAGTTATATTGATAAACAAGTTTTTAAATATTATTGTA
AATTAATAAATTTTAAGAATAAAGGTGATCCTGCAATGATGTTAAGATGT
ATAAATCCGAAAGAAATAGAATTATTTGATTCAGCTTTCGGTGCTAGAGT
TAAATTCCGTTTAGGCGGTCAAGTATTTCCCCCAAATATATATTACAAAA
TATTCACTCACAGACCGATTCAAGATCTGTGTGCTAACAGCCCTAAAAAT
TATAACCAAGTTAGAAGAAAAGACCCAAGACAACTTCATAATAAATATCA
GATCAGTATTTCTAATTCCACAGAAGACTGGTATAAAAGAATCGAAAACA
ATGGATGGCGACAGATTTCAGACCGAATGCTGACTAAAATTTTCTCCGAC
CCTATAACATATGAATCCTCGTATAAACCGGTGACTTTTGAATATGATCC
ACGTCGAAAAATTGAAAACAAAAGAGCTCAGAGAAAGAAAATAAAATTGA
AATGGTTGAGGAAAATGTATAACCTAAATTTGTTAGATATTAAAGAAAAT
ACACAGACAAAGGAGGTTGAAGATTCTACTCAAGAGCTGGATTATAATCA
AACCAAAGTTCTTGTTAAAAAAGCCACAGAAAGCATGATCGAAACTTTGG
AAAAGAAAGGTGAAAAATTTATTGAAGATTGGGCAGTCGATGAATTGCTT
AATTGGACTTCGGGACTGAGCTATGAAAGTTATCTCAATGATTGGAGCAC
TTTGGCAACTTCTCTAGTTTCTGATTGGAAATTAGATTTGCTGAAATCAA
AACCGAACAATGATACTGATCGGTCTATGTTTTATACAGATTGCATTAAT
CCATCAATTGTTGATTTTCAATCACAATAAATTGTTTTATTTTGTTTTAA
TGATTTCCAGAAAAATAAATAAAATGATGTATTTATTATGATTAGCTGTT
ATACATAAATAAATCACGGTGATTTTGTTAAATATAAATAAACAATATTA
TATTATATCACAATATAATTCTTCATTGTTCATTTTAATAATTTTCTTTT
CAAATTCAATGTCTTTTGATTTCATTAACTTTCGGCGATTTCCAGCATCA
AAATATATAATTAATCCAAATATGAATATTGAAAATAGATAAAACACTAG
CAAACTCGGAATCAGAATCATTTCTATTTTTCGTATGACTTCTAGCACTC
GGTTTTCGGTGATATAATTTAGAGTTTTGAAGTCGTAAAAAAATATTGAT
GTTGCTGCATGCCACATGCAAAGGCACATTATCATGAAAATATTTCCAAG
AACCGCTTTATCCAAATAAGTTAAGTAAGGAATTTTTGGTAGATTTTCAC
TGACTGCAACTTTGAATGTAACACTTGTTAAAAGTATAATCATACATAAT
TGTAGACGGCCATGTGTATTGTTGGATATAACTGCAAAGCTACAAAAGGT
TAATAAAACAAACATTGAACTGATAAGCATATGATTCAGAATAAAATATC
CAAAACGCCGGCTAGCTCGACAGGTAAAAGTTATCGTATACCGTTTTTCT
GGACCAATGTTGCAATCACTGATAACTTCTTTAATTTCCACATCAACATG
TGAATGTAAATCCCATTCTTGTGAATCTATTGCGTCAGATAAATTGAGTT
TGCTAATATCATTGGGATATTCAACAAATATCATTTCATCAGCTGACAAT
TCTGTAGAAACCACAATTGACAAGTCTTGACAATCAAATGGGAATTGTTT
CAACTCTAAAGTTTCGTGAAAAATTGCATTTATTCTTCTCTTTTCAATCA
TATATGCTGACCCCTTTTTGTCTGGATAATGAACTTCACGTACAACTGTT
TGCTTATTTTCTTTGTAAATGTTTTCAATATGAATTTTCGGATTCCATAA
TTTAGAAATTTCTTTACTTTTAAAATCCTTAACATTATCCAACGAGGGTT
CTCTCCATTTGGACTGCAAAAATATTTCGGCTGAAAAATGTTCATTTACT
GTATCAACGTGGAAAATCTTCACAAAAACACATCTGATATAGACTCGAAT
TTGTCTTTTCTTATCCATTTATTTGGAAATAGT
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protein sequence of SMED30008627-orf-1

>SMED30008627-orf-1 ID=SMED30008627-orf-1|Name=SMED30008627-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=326bp
YINLIWLVNYFYNIQNMDDINEVIKEKSILKIQRFWRSYIDKQVFKYYCK
LINFKNKGDPAMMLRCINPKEIELFDSAFGARVKFRLGGQVFPPNIYYKI
FTHRPIQDLCANSPKNYNQVRRKDPRQLHNKYQISISNSTEDWYKRIENN
GWRQISDRMLTKIFSDPITYESSYKPVTFEYDPRRKIENKRAQRKKIKLK
WLRKMYNLNLLDIKENTQTKEVEDSTQELDYNQTKVLVKKATESMIETLE
KKGEKFIEDWAVDELLNWTSGLSYESYLNDWSTLATSLVSDWKLDLLKSK
PNNDTDRSMFYTDCINPSIVDFQSQ*
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protein sequence of SMED30008627-orf-2

>SMED30008627-orf-2 ID=SMED30008627-orf-2|Name=SMED30008627-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=357bp
MDKKRQIRVYIRCVFVKIFHVDTVNEHFSAEIFLQSKWREPSLDNVKDFK
SKEISKLWNPKIHIENIYKENKQTVVREVHYPDKKGSAYMIEKRRINAIF
HETLELKQFPFDCQDLSIVVSTELSADEMIFVEYPNDISKLNLSDAIDSQ
EWDLHSHVDVEIKEVISDCNIGPEKRYTITFTCRASRRFGYFILNHMLIS
SMFVLLTFCSFAVISNNTHGRLQLCMIILLTSVTFKVAVSENLPKIPYLT
YLDKAVLGNIFMIMCLCMWHAATSIFFYDFKTLNYITENRVLEVIRKIEM
ILIPSLLVFYLFSIFIFGLIIYFDAGNRRKLMKSKDIEFEKKIIKMNNEE
LYCDII*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR006202Neur_chan_lig-bd
IPR006029Neurotrans-gated_channel_TM
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0005230extracellular ligand-gated ion channel activity
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
Vocabulary: biological process
TermDefinition
GO:0006810transport
GO:0006811ion transport
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33504FAMILY NOT NAMEDcoord: 19..302
NoneNo IPR availablePANTHERPTHR33504:SF2coord: 19..302
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 19..47
score: 6.815