G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30008484 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A193KUC7 (GCR117 OS=Schmidtea mediterranea OX=79327 GN=gcr117 PE=2 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 4.444e-166 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 1 Query: 271 MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXQREXXXXXXXXXXXXXXXXXXXPNTCLFFIMKSLQNDSTINQNYLQ 1194 MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTILLSYLALADLLNILAFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIISNLALILKLVLLSKTNLLLIKTKSNNIQREIRSTITILILSLIFLSGSLPNTCLFFIMKSLQNDSTINQNYLQ Sbjct: 1 MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTILLSYLALADLLNILAFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIISNLALILKLVLLSKTNLLLIKTKSNNIQREIRSTITILILSLIFLSGSLPNTCLFFIMKSLQNDSTINQNYLQ 308 HSP 2 Score: 90.8929 bits (224), Expect = 2.928e-16 Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 3 Query: 1197 LYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALILSNSTKNLSITS 1334 LYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALILSNSTKNLSITS Sbjct: 310 LYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALILSNSTKNLSITS 355
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A183SIW2 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS4160 PE=4 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.850e-39 Identity = 90/224 (40.18%), Postives = 135/224 (60.27%), Query Frame = 1 Query: 298 NYSYIDSPYDMLYLC-DPKTENINI--NCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFT 960 N+ Y+DSP+D+L C D +T N C +S ILG +S YIFP VG GVVSN + Y+FLF + + +RQ I L +A+AD++ I++FGW+W+FPAKGLPY T+G +YFF++N + + C VFR +Y FTS ++ ++FL+ DRC +YFP + R++ K + + L C L + Y R C + +K L +Y VL+ +S +L T Sbjct: 8 NWLYVDSPWDLLRDCKDYQTGNSTKFGACVLSHILGITSAYIFPIVGTFGVVSNFLVFYVFLFVFRRSSRQMIYLGCVAIADMMTIVSFGWMWMFPAKGLPYATSGRVYFFVLNVNDLSCKVFRYVYSFTSCLSSSLFLVTACDRCLCVYFPLKFSRLSKKRAWQAVGLTILCCSLLMLPYPILARHDKFQGKMICWVHEGEK----VLQIYHVLLANSSLLQT 227
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3SM37 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS6000 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.864e-39 Identity = 92/231 (39.83%), Postives = 137/231 (59.31%), Query Frame = 1 Query: 298 NYSYIDSPYDMLYLCD---PKTENINI---NCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGII 972 N+ Y+DSP+D+L C N +I C +S +LGF S YIFPFVGF GV+SNI++ Y+FLF + K +RQ I L+ +A AD+ ++ FGW+W+FPAKGLPY T ++YFFI N ++ C +FR LY FTS V+ +IFLL DRC IYFP + RI+ K + + L + + + I + C + + + L +Y VL+ +S ++ T+ +I Sbjct: 16 NWPYLDSPWDLLRDCQYLASGAANASIYRGACILSHMLGFVSAYIFPFVGFFGVLSNIFVTYVFLFVFRKPSRQMIYLACVAAADVATVILFGWIWMFPAKGLPYATGAHVYFFIFNVNNYSCKIFRYLYSFTSCVSSSIFLLTAFDRCLCIYFPLQFARISRKRAWEAVGVTTLLSALMMLPFGIMIGHGPSNGKIICWVQVEPNA----LQIYHVLLANSSLVQTILVI 242
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3T6L1 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS2698 PE=4 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.258e-37 Identity = 88/224 (39.29%), Postives = 132/224 (58.93%), Query Frame = 1 Query: 298 NYSYIDSPYDMLYLC---DPKTENINI---NCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGV 951 N++Y+DSP+D+L C + N +I C +S +LGF S +IFPFVG GV+SNI++ Y+FLF + K +RQ I L+ +A AD+ I+ FGW+W+FP+KGLPY T ++YFFI N S+ C +FR Y FTS V+ +IFLL DRC IYFP + RI+ K + + L L + + + + C + + + L +Y VL+ +S + Sbjct: 16 NWAYLDSPWDLLRDCQYLNSGAANASIYRGACILSHMLGFVSAFIFPFVGVFGVISNIFVTYVFLFVFRKPSRQMIYLACVAAADVATIILFGWIWMFPSKGLPYATGAHVYFFIFNVSNYSCKIFRYFYSFTSCVSSSIFLLTAFDRCLCIYFPLQFARISRKRAWEAVGVTTLLSALLMLPFGIMVEHGPSNGKIICWVQVEANT----LQIYHVLLANSSL 235
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A3P6PGL7 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS266 PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.198e-34 Identity = 93/230 (40.43%), Postives = 135/230 (58.70%), Query Frame = 1 Query: 298 NYSYIDSPYDMLYLCDPKTENININ---CAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFI--RTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGII 972 ++ YIDSP+D+ CD + N C I+ +LG S YIFPF+G G++SN + Y+F F Y K TRQ I L +A AD+L ++ FGW+W+FPAKGLPY T +YFFI N + V C VFR Y FT++++ ++FLL LDRC +IYFP R RI+ + + I+ L L +L G + ++ Q + K FL +Y VL+ +S +L T+ +I Sbjct: 8 DWPYIDSPWDLFLECDRYNSTVRKNFGACIIAHMLGIVSAYIFPFIGAFGLISNFLVLYVFFFVYRKPTRQMIYLGSIAGADILTLITFGWIWLFPAKGLPYATLARVYFFIFNFNDVTCKVFRYAYSFTASLSSSLFLLTALDRCLSIYFPLRFSRISTRRAWEAVLIITLVS-ALAMLPFGLMVGHSLSQGKIICWVLEQKT-----FLQIYHVLLSNSSLLQTLLVI 231
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022744.1 (SMESG000022744.1) HSP 1 Score: 481.1 bits (1237), Expect = 1.236e-169 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 1 Query: 271 MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXQREXXXXXXXXXXXXXXXXXXXPNTCLFFIMKSLQNDSTINQNYLQ 1194 MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTILLSYLALADLLNILAFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIISNLALILKLVLLSKTNLLLIKTKSNNIQREIRSTITILILSLIFLSGSLPNTCLFFIMKSLQNDSTINQNYLQ Sbjct: 1 MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTILLSYLALADLLNILAFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGIIISNLALILKLVLLSKTNLLLIKTKSNNIQREIRSTITILILSLIFLSGSLPNTCLFFIMKSLQNDSTINQNYLQ 308 HSP 2 Score: 90.8929 bits (224), Expect = 8.143e-20 Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 3 Query: 1197 LYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALILSNSTKNLSITS 1334 LYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALILSNSTKNLSITS Sbjct: 310 LYSLTDAFYQLLIWIESFSFLVYVIRMKNFRALILSNSTKNLSITS 355
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000055742.1 (SMESG000055742.1) HSP 1 Score: 161.77 bits (408), Expect = 4.075e-45 Identity = 100/226 (44.25%), Postives = 134/226 (59.29%), Query Frame = 1 Query: 292 KLNYSYIDSPYDMLYLCDPKTENININ----CAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFIRTIYQHPYFFCTIGNK-DKSLNLFLNLYRVLIVHSGVL 954 K NYSYID+PYD+LY C + EN + C +S I G S YIFP G +SN+ ICYIF+ +Y K+TRQTILL+ L+ ADLL IL+ GWLW+FPAKGLPY + G IY FIIN S C +FR F+ + F FLLVCLDR AIY+P + + K ++ C+ + + F+R+I FCT + D FL +R+L ++SG + Sbjct: 8 KSNYSYIDTPYDLLYFCHSEDENNPKSDTQLCVLSHIFGIISVYIFPIFASFGFISNLLICYIFIVKYSKKTRQTILLAVLSFADLLFILSLGWLWMFPAKGLPYASQGMIYLFIINLSDFSCRLFRGFCSFSFSWIFGAFLLVCLDRMLAIYYPMKMINFGYKSAVYASLVMLGLCICCSTVMNVFLRSIKIGSKIFCTATSGYDVHTIEFLKTWRLLFLNSGAI 233
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000022976.1 (SMESG000022976.1) HSP 1 Score: 140.198 bits (352), Expect = 4.231e-37 Identity = 96/240 (40.00%), Postives = 133/240 (55.42%), Query Frame = 1 Query: 286 SKKLNYSYIDSPYDMLYLCDP-----KTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPK--RTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLTVLYTGFI----RTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGII 972 KK + YIDSP+D+L C+ + E + C S ILG SGYIFPFVG G++ N I Y+F+ RYP RTRQ I LS LA+AD +I+ FGWLWIFPAKGLPY++ G IY+F N+++ C R +Y F ST+ +FLL +DRC +IY P L+ + K ++V + + +L T F + + C I D + LY VL + G + T+ II Sbjct: 4 EKKNAWLYIDSPWDLLVPCEDLNTTIEDERTSALCISSHILGVFSGYIFPFVGVFGIIFNFMIFYVFMIRYPPKLRTRQLIYLSALAIADNFSIITFGWLWIFPAKGLPYISKGLIYYFTFNENNPTCKAHRYIYSFASTLAVNLFLLTSIDRCLSIYKP---LKYSKKGKTFAWTLVAITTVISGILMTPFAIIISLNVNKQNLIICWI--DDARFAVSGQLYHVLFSNCGFIQTIAII 238
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000053055.1 (SMESG000053055.1) HSP 1 Score: 129.413 bits (324), Expect = 3.199e-33 Identity = 84/240 (35.00%), Postives = 127/240 (52.92%), Query Frame = 1 Query: 280 FTSKKLNYSYIDSPYDMLYLCDP-----KTENININCAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFL-TCSIV---FLFCLPLTVLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGII 972 F+ +K + Y+DSP+D+L C+ T N + C S I+GF S YI P + G+VSN+ YI + RTRQ I LS++A D +NI+ +GW+WIF AKGLPY + G + FF NQ + C + R S +IFLL +DR FAI++P + L I + + + ++ F+ P + Y G+ T Q + + ++ L +FL +Y VL G T+ II Sbjct: 6 FSEQKARWKYVDSPWDLLTACEELRLSKTTGNTLVFCIFSHIMGFWSAYILPIISLFGIVSNMVTIYILSSKLHDRTRQYIYLSFIAGCDSVNIICYGWIWIFFAKGLPYASLGKVSFFTYNQGEISCKLHRYFIAAISCSASSIFLLASVDRWFAIFWPLKCLNIPLRRAWQYSIGVIISSFILMSPFAI-YMGYTETGNQKTLCWIKVSTDEQGLAIFLQVYNVLFSFCGSFQTIAII 244
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000052989.1 (SMESG000052989.1) HSP 1 Score: 125.946 bits (315), Expect = 4.360e-32 Identity = 87/244 (35.66%), Postives = 128/244 (52.46%), Query Frame = 1 Query: 265 PKMGYFTSKKLNYSYIDSPYDMLYLCDP-KTENININ----CAISEILGFSSGYIFPFVGFIGVVSNIYICYIFLFRYPKRTRQTIXXXXXXXXXXXXXXXFGWLWIFPAKGLPYMTNGNIYFFIINQSSVYCTVFRTLYFFTSTVTFAIFLLVCLDRCFAIYFPFRSLRITNKMTFLTCSIVFLFCLPLT---VLYTGFIRTIYQHPYFFCTIGNKDKSLNLFLNLYRVLIVHSGVLFTVGII 972 P + Y + K + +IDSP+D+L C+ K + N N C S+I+GF S ++FP + G+ NI I YIF F++ +TRQ I LS+LA D N++ GW+WIF AKGLPY ++G +YFF NQ + C + R S +IFLL +DR FAI++P + L I K + S+V L + ++Y T + ++L FL +Y VL G T+ II Sbjct: 2 PNLTY-SDLKAQWKFIDSPWDLLISCEEVKLKQTNENNYLFCVFSQIMGFWSAFVFPVISIFGIFLNILIIYIFNFKFRDKTRQYIYLSFLAAFDSFNLICSGWMWIFFAKGLPYASSGVLYFFTYNQGVIPCKLHRYFTAAISCSAISIFLLTSIDRYFAIFWPLKCLNIPLKKAWQYSSMVVLLSFIMMSPFIVYMDHSETGNHKTICWLEASKDKETLGTFLQIYNVLFSFCGSFQTLAII 244 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008484 ID=SMED30008484|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1336bpback to top protein sequence of SMED30008484-orf-1 >SMED30008484-orf-1 ID=SMED30008484-orf-1|Name=SMED30008484-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=313bp MGYFTSKKLNYSYIDSPYDMLYLCDPKTENININCAISEILGFSSGYIFPback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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