HTH CENPB-type domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30008448 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD1 (tigger transposable element derived 1 [Source:HGNC Symbol;Acc:HGNC:14523]) HSP 1 Score: 88.9669 bits (219), Expect = 9.907e-46 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH--TYLE-HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAF 1171 F WF +F P V+ Y EK + FKILLLIDNAP H +E + + ++F+P NTTS+L+P DQG+I+TFK+YYL+ F Sbjct: 272 FTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTF 351 HSP 2 Score: 56.6102 bits (135), Expect = 9.907e-46 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 735 VTRSQKVASGFKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFT 947 + R +K GFKASK+R+TL +N + D LKP+ I + PRA+KN TL V + N+KA +TA +FT Sbjct: 202 IAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFT 273 HSP 3 Score: 45.8246 bits (107), Expect = 9.907e-46 Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 2 Query: 506 AKKTVFSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERK 721 A + F AS GW F R+ HN+ + E SA+ ++A +PE LA+II+E G T ++ N DET F+ +K Sbjct: 124 AAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTKQQIFNVDETAFYWKK 195 HSP 4 Score: 45.0542 bits (105), Expect = 9.907e-46 Identity = 28/109 (25.69%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIK 479 RK R ++L K++++ E G S +G+R + + L+ V T ++ + R ++ EK L VWI D + +PL + I+ KAL ++ +K Sbjct: 9 RKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK 117 HSP 5 Score: 29.261 bits (64), Expect = 9.907e-46 Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD 1344 WK F+I+D +K + + +K STL WK + P + D Sbjct: 375 WKGFTILDAIKNIRDS-WEEVKLSTLTGVWKKLIPTLIDD 413
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 87.4261 bits (215), Expect = 4.200e-24 Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKCQKERD*ITKSRQWI*---SI*RTYYFILQQRFTGSH-VKTSIY**NV*TTCNEK*KRK-------NLACSLDGQ*QSMGNSISFYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH---TYLEHTNVKI--VFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQ 1174 F+ S GWL F R+SI + I+ E + ++ + +F IE P ++ NADETG F KC R + K + + SI + TG H +K + K R NL S Q + + F +WF+ F+P+V+ Y+ KGL+ K +LL+DN+P H L + +I +LPPN SL++P DQG+IAT K Y Q Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFW-KCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCV-------VGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQ 344 HSP 2 Score: 38.5058 bits (88), Expect = 4.200e-24 Identity = 24/110 (21.82%), Postives = 52/110 (47.27%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMV--GT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGI 476 ++KR ++++ K+ I+ ++E+G SS L + E +R I++N + Y T L K ++ + E+ ++A+ W K P+ G ++A + + Sbjct: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL 113 HSP 3 Score: 26.1794 bits (56), Expect = 4.200e-24 Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 1329 WKK +++D + + +A + +KP T++ WK + P Sbjct: 357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKKILP 390
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333]) HSP 1 Score: 66.6254 bits (161), Expect = 6.375e-21 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLID---NAPGHTYLEHTNVKIV--FLPPNTTSLLRPQDQGIIATFKTYY 1156 F +WF +F+P+V+ +++ KGL K +LL+D P L + +I+ +LPPN TSL++P QG++AT K YY Sbjct: 262 FRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYY 338 HSP 2 Score: 40.817 bits (94), Expect = 6.375e-21 Identity = 21/69 (30.43%), Postives = 35/69 (50.72%), Query Frame = 3 Query: 741 RSQKVASGFKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 + + SG ++S+ERI + C +N + L + K KPRA K ++ L V + + AW+ VF Sbjct: 194 ETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVF 262 HSP 3 Score: 33.8834 bits (76), Expect = 6.375e-21 Identity = 20/64 (31.25%), Postives = 31/64 (48.44%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F+AS+GWL F R+ I K ++ +A EF +E+ P ++ AD+TG F Sbjct: 119 FNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLF 182
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333]) HSP 1 Score: 66.6254 bits (161), Expect = 6.375e-21 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLID---NAPGHTYLEHTNVKIV--FLPPNTTSLLRPQDQGIIATFKTYY 1156 F +WF +F+P+V+ +++ KGL K +LL+D P L + +I+ +LPPN TSL++P QG++AT K YY Sbjct: 262 FRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYY 338 HSP 2 Score: 40.817 bits (94), Expect = 6.375e-21 Identity = 21/69 (30.43%), Postives = 35/69 (50.72%), Query Frame = 3 Query: 741 RSQKVASGFKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 + + SG ++S+ERI + C +N + L + K KPRA K ++ L V + + AW+ VF Sbjct: 194 ETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVF 262 HSP 3 Score: 33.8834 bits (76), Expect = 6.375e-21 Identity = 20/64 (31.25%), Postives = 31/64 (48.44%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F+AS+GWL F R+ I K ++ +A EF +E+ P ++ AD+TG F Sbjct: 119 FNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLF 182
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Match: TIGD6 (tigger transposable element derived 6 [Source:HGNC Symbol;Acc:HGNC:18332]) HSP 1 Score: 50.447 bits (119), Expect = 2.558e-19 Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTYLEH-TNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 F EW ++V K E +ILLLIDN H L H +++ +LP N T++L+P + GII T K Y + I Sbjct: 261 FNEWL-------MQVDARMKRAERRILLLIDNCSAHNMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQI 334 HSP 2 Score: 41.2022 bits (95), Expect = 2.558e-19 Identity = 20/61 (32.79%), Postives = 32/61 (52.46%), Query Frame = 3 Query: 762 GFKASKERITLFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 G KA + LFC N S ++PL + ++ P + KN+ +L + AN AW+T +F Sbjct: 203 GKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCL--KNIHSLPCDYRANQWAWMTRDLF 261 HSP 3 Score: 37.7354 bits (86), Expect = 2.558e-19 Identity = 24/106 (22.64%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 156 KKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDS---INLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHI 464 KKR+ SLE K++++ +++G ++ K F + + T ++ + +R VG + +R + + +KA+ W + + K + + G+ I++KAL++ Sbjct: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGP----QRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNL 108 HSP 4 Score: 25.7942 bits (55), Expect = 2.558e-19 Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSAN-------DKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F AS GWL F +R+ I L C S DK ++ ++I A +P + NADETG F Sbjct: 117 FQASVGWLNRFRDRHGIA-LKAVCREDSDRLMNGLGIDKINEWHAGEIIKLI--ADYSPDDIFNADETGVF 184
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: kif6 (kinesin family member 6 [Source:Xenbase;Acc:XB-GENE-1014042]) HSP 1 Score: 63.929 bits (154), Expect = 5.629e-16 Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGL--EFKILLLIDNAPGHTYLE---HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 F +WF F+PE + + GL + K++L++D+ P H E NV V LPP+ TS ++P DQGI+ FK+ Y + Q + Sbjct: 437 FQDWFENHFVPEARAHCMSVGLSQDAKVMLILDHCPTHPSAEFLVKDNVFAVCLPPDCTSFIQPLDQGILRLFKSNYKSEFLQRM 521 HSP 2 Score: 41.2022 bits (95), Expect = 5.629e-16 Identity = 29/84 (34.52%), Postives = 45/84 (53.57%), Query Frame = 3 Query: 705 VFLKENAKKNVTRSQKV-ASGFKASKERIT-LFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFTN 950 +F + +K V +QK +SG + KER+T L CSN + + L I K+ PRA K V+ V + AN +A +T +F + Sbjct: 358 LFWRHLPQKLVATAQKPPSSGLEDPKERLTVLACSNAAGTHKARLLVIGKSRNPRAF--KGVRVFPVTYTANKQAGITREIFQD 439
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000046714.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460367.1:582927:585046:-1 gene:ENSXETG00000018570.1 transcript:ENSXETT00000046714.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 63.1586 bits (152), Expect = 5.187e-10 Identity = 78/271 (28.78%), Postives = 112/271 (41.33%), Query Frame = 3 Query: 162 RKCISLETKIQILDRIENGDSS-TNLGKRFDANEAMIRTI-KRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYA--GIKQLQPSDSTRPR-----KLFFLQVQGG*EHF*TETRSITYKSNVK*AQLTINLLKNXXXXXXXXXXXXDALHKKFVMQMKLVFLKENAKKNVTRSQKVASGFKASKERIT-LFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 RK +SLE KI ILDR ++ + L K + + TI K+ S G + K YV E+ EK L W A + VP+ G +++KA+HI GI S+ R + + V G E++S+ I+ + N + + L F +F K + G K SK R+T LF +N LKPL I K+ KPR KNV TL ++ AN KAW+T +F Sbjct: 8 RKSLSLEEKIAILDRADSYHGTRVALAKELGIPVSTLGTIIKQRASTEGSADKCGP-QAKKRKYVTQSKYEQMEKLLQEWFAGLHASNVPISGIMLREKAVHIATRLGIDNFTASNGWIDRFKKRYNVVYKAVCG-------ESKSVD-----------IDTVTNWKTNQLPCYLEGYELKNIFNTDETGLFFNVLPGKTFCFRGEDCHGGKLSKLRLTVLFTTNADGSEKLKPLVIGKSVKPRCF--KNVNTLPTNYTANTKAWMTTKLF 257
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Match: apmapl (adipocyte plasma membrane associated protein LIKE [Source:Xenbase;Acc:XB-GENE-5754317]) HSP 1 Score: 54.299 bits (129), Expect = 9.369e-10 Identity = 27/78 (34.62%), Postives = 44/78 (56.41%), Query Frame = 2 Query: 947 EWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTYLE-----HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQ 1165 EWF F+P VK Y++ L+ K +LL++ PG E N++++FL T S + DQG+I++FK Y ++ Sbjct: 231 EWFLEEFVPAVKRYLKRCCLQQKAVLLVNQCPGKPPEEDLQTADGNIRVLFLSKTTRSKIPSMDQGVISSFKQLYRRE 308 HSP 2 Score: 29.6462 bits (65), Expect = 9.369e-10 Identity = 16/58 (27.59%), Postives = 27/58 (46.55%), Query Frame = 3 Query: 759 SGFKASKERITLFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVT 932 SG+ E L +N++ LKPL + K P ++++ N + + AWVT Sbjct: 170 SGY--GDEVTVLLAANLTGSHKLKPLVVGKLRDPPSLRHHNQDKFPAVYHYSRNAWVT 225
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Jrkl (Jrk-like [Source:MGI Symbol;Acc:MGI:1924782]) HSP 1 Score: 81.6481 bits (200), Expect = 7.391e-23 Identity = 66/226 (29.20%), Postives = 107/226 (47.35%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKCQKERD*ITKSRQWI*SI*RTYYFILQQRFT--GSHVKTSIY**NV*TTCNEK*KRK-------NLACSLDGQ*QSMGNSISFYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH---TYLEHTNVKI--VFLPPNTTSLLRPQDQGIIATFKTYY 1156 F+ S GWL F R+SI + I+ E + ++ + +F IE+ P ++ NADETG F KC R + K + + + + ++R T T ++ + + R NL S Q + + F +WF+ F+P+V+ Y+ KGL+ K +LL+DN+P H L + +I +LPPN SL++P QG+IA K Y Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQPEQIYNADETGLF-WKCLPSRTTVIKGKCTV-----PGHNLGEERITVMCCTNATGLHKLKLCVVGKARKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPLGQGVIAAMKRNY 338 HSP 2 Score: 39.2762 bits (90), Expect = 7.391e-23 Identity = 25/110 (22.73%), Postives = 52/110 (47.27%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMV--GT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGI 476 ++KR ++++ K+ I+ ++E+G SS L + E +R I++N + Y T L K ++ + E+ +KA+ W K P+ G ++A + + Sbjct: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPSMYEELDKAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL 113 HSP 3 Score: 26.5646 bits (57), Expect = 7.391e-23 Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 1329 WKK +++D + + +A + +KP T++ WK + P Sbjct: 357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKQILP 390
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Tigd2 (tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390]) HSP 1 Score: 62.7734 bits (151), Expect = 1.805e-18 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 947 EWFNTFFIPEVKVYMEEKGLEFKILLLID---NAPGHTYLEHTNVKIV--FLPPNTTSLLRPQDQGIIATFKTYY 1156 +WF F+P+V+ +++ KGL K +LL+D P L + +I+ +LPPN TSL++P QG++ T K YY Sbjct: 264 QWFEKCFVPQVQKHLKSKGLREKAVLLLDFPAAHPAEELLSSDDGRIIVKYLPPNVTSLIQPMSQGVLTTVKRYY 338 HSP 2 Score: 36.5798 bits (83), Expect = 1.805e-18 Identity = 17/61 (27.87%), Postives = 30/61 (49.18%), Query Frame = 3 Query: 765 FKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 ++ S+ERI + C +N + L + K +PRA K ++ L V + + AW+ V Sbjct: 202 YRTSRERIIIMCCANATGSHKLNLCVVGKAKRPRAFKGTDLSNLPVTYFSQKSAWIEPSVL 262 HSP 3 Score: 33.113 bits (74), Expect = 1.805e-18 Identity = 20/64 (31.25%), Postives = 30/64 (46.88%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F+AS+GWL F R+ I K ++ +A EF +E P ++ AD+TG F Sbjct: 119 FNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGNFQEFVERENLLPEQIYGADQTGLF 182
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Match: Jrk (jerky [Source:MGI Symbol;Acc:MGI:106214]) HSP 1 Score: 52.373 bits (124), Expect = 1.056e-13 Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGL--EFKILLLIDNAPGHTY---LEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYL 1159 F +WF+ F+P V+ + GL + K +LL+D++ H+ L NV +FLP + TSLL+P +QGI F ++ Sbjct: 267 FSDWFHHIFVPSVREHFRTIGLPEDSKAILLLDHSRAHSQESELVSENVFTIFLPSSVTSLLQPTEQGIRRAFMRLFI 344 HSP 2 Score: 44.2838 bits (103), Expect = 1.056e-13 Identity = 22/63 (34.92%), Postives = 35/63 (55.56%), Query Frame = 3 Query: 765 FKASKERIT-LFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFTN 950 FK K+R+T L C+N + +KPL I K PRA + ++ L + + A AWV +F++ Sbjct: 209 FKQGKDRLTVLMCANATGSHRIKPLAIGKGGGPRAF--RGIQHLPIAYKAQGNAWVDKEIFSD 269
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96MW7|TIGD1_HUMAN (Tigger transposable element-derived protein 1 OS=Homo sapiens OX=9606 GN=TIGD1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.338e-45 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH--TYLE-HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAF 1171 F WF +F P V+ Y EK + FKILLLIDNAP H +E + + ++F+P NTTS+L+P DQG+I+TFK+YYL+ F Sbjct: 272 FTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTF 351 HSP 2 Score: 56.6102 bits (135), Expect = 4.338e-45 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 735 VTRSQKVASGFKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFT 947 + R +K GFKASK+R+TL +N + D LKP+ I + PRA+KN TL V + N+KA +TA +FT Sbjct: 202 IAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFT 273 HSP 3 Score: 45.8246 bits (107), Expect = 4.338e-45 Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 2 Query: 506 AKKTVFSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERK 721 A + F AS GW F R+ HN+ + E SA+ ++A +PE LA+II+E G T ++ N DET F+ +K Sbjct: 124 AAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTKQQIFNVDETAFYWKK 195 HSP 4 Score: 45.0542 bits (105), Expect = 4.338e-45 Identity = 28/109 (25.69%), Postives = 51/109 (46.79%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIK 479 RK R ++L K++++ E G S +G+R + + L+ V T ++ + R ++ EK L VWI D + +PL + I+ KAL ++ +K Sbjct: 9 RKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK 117 HSP 5 Score: 29.261 bits (64), Expect = 4.338e-45 Identity = 14/40 (35.00%), Postives = 22/40 (55.00%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD 1344 WK F+I+D +K + + +K STL WK + P + D Sbjct: 375 WKGFTILDAIKNIRDS-WEEVKLSTLTGVWKKLIPTLIDD 413
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9Y4A0|JERKL_HUMAN (Jerky protein homolog-like OS=Homo sapiens OX=9606 GN=JRKL PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.838e-23 Identity = 73/234 (31.20%), Postives = 108/234 (46.15%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKCQKERD*ITKSRQWI*---SI*RTYYFILQQRFTGSH-VKTSIY**NV*TTCNEK*KRK-------NLACSLDGQ*QSMGNSISFYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH---TYLEHTNVKI--VFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQ 1174 F+ S GWL F R+SI + I+ E + ++ + +F IE P ++ NADETG F KC R + K + + SI + TG H +K + K R NL S Q + + F +WF+ F+P+V+ Y+ KGL+ K +LL+DN+P H L + +I +LPPN SL++P DQG+IAT K Y Q Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFW-KCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCV-------VGKAKKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQ 344 HSP 2 Score: 38.5058 bits (88), Expect = 1.838e-23 Identity = 24/110 (21.82%), Postives = 52/110 (47.27%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMV--GT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGI 476 ++KR ++++ K+ I+ ++E+G SS L + E +R I++N + Y T L K ++ + E+ ++A+ W K P+ G ++A + + Sbjct: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL 113 HSP 3 Score: 26.1794 bits (56), Expect = 1.838e-23 Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 1329 WKK +++D + + +A + +KP T++ WK + P Sbjct: 357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKKILP 390
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|B2RRL2|JERKL_MOUSE (Jerky protein homolog-like OS=Mus musculus OX=10090 GN=Jrkl PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.469e-22 Identity = 66/226 (29.20%), Postives = 107/226 (47.35%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKCQKERD*ITKSRQWI*SI*RTYYFILQQRFT--GSHVKTSIY**NV*TTCNEK*KRK-------NLACSLDGQ*QSMGNSISFYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH---TYLEHTNVKI--VFLPPNTTSLLRPQDQGIIATFKTYY 1156 F+ S GWL F R+SI + I+ E + ++ + +F IE+ P ++ NADETG F KC R + K + + + + ++R T T ++ + + R NL S Q + + F +WF+ F+P+V+ Y+ KGL+ K +LL+DN+P H L + +I +LPPN SL++P QG+IA K Y Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQPEQIYNADETGLF-WKCLPSRTTVIKGKCTV-----PGHNLGEERITVMCCTNATGLHKLKLCVVGKARKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPLGQGVIAAMKRNY 338 HSP 2 Score: 39.2762 bits (90), Expect = 4.469e-22 Identity = 25/110 (22.73%), Postives = 52/110 (47.27%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMV--GT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGI 476 ++KR ++++ K+ I+ ++E+G SS L + E +R I++N + Y T L K ++ + E+ +KA+ W K P+ G ++A + + Sbjct: 4 KRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPSMYEELDKAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL 113 HSP 3 Score: 26.5646 bits (57), Expect = 4.469e-22 Identity = 11/35 (31.43%), Postives = 22/35 (62.86%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWP 1329 WKK +++D + + +A + +KP T++ WK + P Sbjct: 357 WKKLTLLDALYEIAMA-WNLVKPVTISRAWKQILP 390
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q4W5G0|TIGD2_HUMAN (Tigger transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=TIGD2 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.791e-20 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLID---NAPGHTYLEHTNVKIV--FLPPNTTSLLRPQDQGIIATFKTYY 1156 F +WF +F+P+V+ +++ KGL K +LL+D P L + +I+ +LPPN TSL++P QG++AT K YY Sbjct: 262 FRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYY 338 HSP 2 Score: 40.817 bits (94), Expect = 2.791e-20 Identity = 21/69 (30.43%), Postives = 35/69 (50.72%), Query Frame = 3 Query: 741 RSQKVASGFKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 + + SG ++S+ERI + C +N + L + K KPRA K ++ L V + + AW+ VF Sbjct: 194 ETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVF 262 HSP 3 Score: 33.8834 bits (76), Expect = 2.791e-20 Identity = 20/64 (31.25%), Postives = 31/64 (48.44%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F+AS+GWL F R+ I K ++ +A EF +E+ P ++ AD+TG F Sbjct: 119 FNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLF 182
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q17RP2|TIGD6_HUMAN (Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=2 SV=2) HSP 1 Score: 50.447 bits (119), Expect = 1.121e-18 Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTYLEH-TNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 F EW ++V K E +ILLLIDN H L H +++ +LP N T++L+P + GII T K Y + I Sbjct: 261 FNEWL-------MQVDARMKRAERRILLLIDNCSAHNMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQI 334 HSP 2 Score: 41.2022 bits (95), Expect = 1.121e-18 Identity = 20/61 (32.79%), Postives = 32/61 (52.46%), Query Frame = 3 Query: 762 GFKASKERITLFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 G KA + LFC N S ++PL + ++ P + KN+ +L + AN AW+T +F Sbjct: 203 GKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCL--KNIHSLPCDYRANQWAWMTRDLF 261 HSP 3 Score: 37.7354 bits (86), Expect = 1.121e-18 Identity = 24/106 (22.64%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 156 KKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDS---INLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHI 464 KKR+ SLE K++++ +++G ++ K F + + T ++ + +R VG + +R + + +KA+ W + + K + + G+ I++KAL++ Sbjct: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGP----QRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNL 108 HSP 4 Score: 25.7942 bits (55), Expect = 1.121e-18 Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSAN-------DKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F AS GWL F +R+ I L C S DK ++ ++I A +P + NADETG F Sbjct: 117 FQASVGWLNRFRDRHGIA-LKAVCREDSDRLMNGLGIDKINEWHAGEIIKLI--ADYSPDDIFNADETGVF 184
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A2A4JVK0 (HTH CENPB-type domain-containing protein OS=Heliothis virescens OX=7102 GN=B5V51_10937 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.434e-74 Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 2 Query: 932 SISFYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTY---LEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 S F +WF F+PEV+ Y++ K L+FK +L++DNAPGH H N+K+ FLPPNTT+LL+P DQGII FK YY+++ F++I Sbjct: 272 SAVFCDWFRNCFVPEVETYLKSKNLDFKAVLVLDNAPGHPRELGTMHPNIKVTFLPPNTTALLQPMDQGIIQAFKLYYIRRTFKFI 357 HSP 2 Score: 83.5741 bits (205), Expect = 1.434e-74 Identity = 44/109 (40.37%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 156 KKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQ 482 +K+ + L+ KI++LDR+ G+S ++ + FD NE+ +R+IK+++ +R + T LS K VR +EK E AL++WI D NQK+VPL G I++KA +YA K+ Sbjct: 13 RKKSVLPLKVKIEMLDRLRLGESFASISRSFDVNESTVRSIKKSED-RIRSSVASTSLSAKV--VRDPAIEKMEVALSLWIEDRNQKRVPLSGPMIREKAKRLYAHFKE 118 HSP 3 Score: 76.6406 bits (187), Expect = 1.434e-74 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 735 VTRSQKVASGFKASKERITLF-CSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 +++S+K A GFKA+K+R+TL CSN S D ++KPL + + PRA++N+N L V W A+ KAWVT+ VF Sbjct: 205 ISKSEKSAPGFKAAKDRVTLLLCSNASGDCVIKPLMLYRCLNPRALQNQNKDNLPVFWRADKKAWVTSAVF 275 HSP 4 Score: 61.6178 bits (148), Expect = 1.434e-74 Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 1207 ITVIDAWKKFSIMDCVKFVNIA-VIHGLKPSTLNACWKAVWPECVKDN-NCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVISNESLMEVALE 1506 ++V++ WKKF I C+ +NI + LKP TL +CWK +WP + N L I + +NI +++ +G GFE + D++E++ +E L E LE Sbjct: 367 MSVMECWKKFDIAKCI--INIKESLQELKPHTLKSCWKKLWPVLMAGNEEESLQIQSLAANIAEIASEIGRDGFEQIESSDVQELL---ASQDEDLTETDLE 463 HSP 5 Score: 48.9062 bits (115), Expect = 1.434e-74 Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 F AS GW F R S+HN+ I E A+ +A +PE+ A ++ + G TP ++ NADETG F Sbjct: 132 FQASEGWFNKFKMRQSLHNIKIVGEAAYADTAAAERYPEEFANLVADGGYTPEQIFNADETGLF 195
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A4Y2B316 (Tigger transposable element-derived protein 1 OS=Araneus ventricosus OX=182803 GN=TIGD1_66 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.294e-74 Identity = 100/268 (37.31%), Postives = 152/268 (56.72%), Query Frame = 3 Query: 159 KRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFK-YSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQLQPSDSTRPRKLFFLQVQGG*EHF*TE----TRSITYKSNVK*AQLTINLLKNXXXXXXXXXXXXDALHKKFVMQMKLVFLKENAKKNVTRSQKVASGFKASKERIT-LFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 KRK I+LETKIQILDR++ G+ S+++ K F+ NEA +RTIK+N+ V G S K S+VR +E EKAL W+ +N QK++P++G+ I+QKA+ I+ IK QP+ S + + F +G E F I + + + K K + PD + +M L + K + +++S++ +GFKASKERIT L CSN S D ++KP+ I+++ PRAMK+ + L V+W A+NK VT +F Sbjct: 9 KRKRITLETKIQILDRLKTGEGSSSVAKHFELNEATVRTIKKNEEKIRASVAAGCSESLKRTSHVRDTTLELMEKALIHWVEENIQKKIPIEGDAIRQKAVEIFNNIKAKQPATSNQATE--FSGSKGWLERFKKRFSLCNAKIRGEVAITDEKAATEYPKEFSKIIQDGAYTPDQVFN--ANEMGLFWKKMPRRTYLSQSERSNAGFKASKERITVLLCSNASGDYLMKPMVISRSLNPRAMKSLDKGNLPVYWKADNKTCVTVPIF 272 HSP 2 Score: 93.5893 bits (231), Expect = 4.294e-74 Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH-TYLEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 F +WF F+ +V++Y++EK L FK+LLLID+AP H T L H NVK+VFLPPNT SL++P ++ I TF YY+K F+ I Sbjct: 272 FRDWFYNCFVSDVELYVKEKNLSFKVLLLIDSAPRHPTDLHHDNVKVVFLPPNTASLIQPLERSIFTTFNAYYIKHIFKRI 352 HSP 3 Score: 88.9669 bits (219), Expect = 4.294e-74 Identity = 40/110 (36.36%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 1183 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVISNESLMEVALEGT 1512 +E+ + ++V W+ +SI+DCV+ + +A+ +K STLNACWK++WP+ V + V + EYS I+ L++ VGG GF+D+A ++EE++ D + +EV + T Sbjct: 354 DEVNSGNTLSVTRVWENYSIVDCVELIKLAITE-IKKSTLNACWKSIWPDVVVSGHDVPALENEYSEIMRLAHRVGGEGFDDMASNELEELMTDSEFNAAKQVEVVFDST 462
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: T2M7L0 (Tigger transposable element-derived protein 1 (Fragment) OS=Hydra vulgaris OX=6087 GN=TIGD1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.670e-71 Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTY-LEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 F +WF F+P+V+ +M EK L F++LL++DNA H+ + H NVK+++ PPN TSL++P DQGII TFK YY++ F+ I Sbjct: 356 FKDWFYNCFVPQVESFMVEKNLSFRVLLILDNASSHSAEINHPNVKVLYFPPNCTSLIQPLDQGIIQTFKMYYIQIFFEVI 436 HSP 2 Score: 74.3294 bits (181), Expect = 1.670e-71 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 159 KRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSF--KYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIK 479 KRK I+L K ILDR++NG+ ++ K + NE+ IRT+K+N+ + +R + + S + + +R +M K E+AL +W+ D K++P+ GN IK+KAL IY K Sbjct: 92 KRKSITLMEKTAILDRLKNGEKVFSVAKSLNLNESTIRTLKKNE-VKIRKTVANSCPSGAKRATRIRNAIMIKMERALMIWLEDCVSKKIPVCGNLIKRKALKIYEHFK 199 HSP 3 Score: 73.9442 bits (180), Expect = 1.670e-71 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 3 Query: 702 LVFLKENAKKNVTRSQKVASGFKASKERITLF-CSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 L + K ++ +++ ++K ASGFK+SK+RIT+ CSN+S ++KP+ IN PRA KN N+ L V W AN KAW+T +F Sbjct: 275 LYWKKLPSRTHISINEKKASGFKSSKQRITIHKCSNLSGSLLIKPMIINNFLNPRAFKNVNMSELPVFWRANKKAWMTRELF 356 HSP 4 Score: 72.7886 bits (177), Expect = 1.670e-71 Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 1210 TVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVISNESLMEVALEGTDLQFFY-----KIFLNGTY 1554 T+++ WK+FSI+DC + V++A +K STLNACW+ + P+ VK + + E + I+ ++ G GF D+ +DIE+++ + ++ E L E+ E T F K LN TY Sbjct: 447 TLLEVWKEFSILDCTRIVSLACTE-IKQSTLNACWRPLLPQIVKKEDNISETVKEITRIV---SSFGKEGFADIQVQDIEQLLQERSLNEEELAELIDESTSETFVEEDTNNKSALNFTY 562 HSP 5 Score: 50.447 bits (119), Expect = 1.670e-71 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERK 721 F+AS GWL R S+HN+ + E SA+ K+A +F L II++ G ++ NADETG + +K Sbjct: 213 FTASAGWLDKLKKRYSLHNIKFQGEQASADVKAAEKFKTDLPEIIDKEGYVADQIFNADETGLYWKK 279
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A034WGK8 (Tigger transposable element-derived protein 1 OS=Bactrocera dorsalis OX=27457 GN=TIGD1 PE=4 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.137e-71 Identity = 98/269 (36.43%), Postives = 136/269 (50.56%), Query Frame = 3 Query: 159 KRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRND-SINLRYVMVGT*LSFKYSY-VRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQLQPSDSTRPRKLFFLQVQGG*EHF*TETR----SITYKSNVK*AQLTINLLKNXXXXXXXXXXXXDALHKKFVMQMKLVFLKENAKKNVTRSQKVASGFKASKERITLF-CSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 KRK +SL KI IL+ +++G+ N+ KR NE+ +RTIKR + +I + G+ S YS+ R VM K E+AL WI D +++P+D IK+KA Y K +PS S F G F IT +S + K + D + + L + K ++ V + K GFK +KERITL CSN S D++LKPL +NK KPRA+K ++K L VHWMAN KAWVTA +F Sbjct: 4 KRKRLSLRQKIVILNSLKSGEKPANIAKRHKINESSVRTIKRKENAIRKTFTECGS-SSLTYSFNTRDVVMVKVERALVWWIEDLVHRRIPVDTRCIKEKATVFYEKFKCEKPSSSNMQNTKQFCASNGWLRCFLKRNSLHNVKITGESASADEEAAKIFPKTFSDTIKAHGYVADQIFN--ADETGLYWKKMPSRTYVAKQTKSVHGFKTAKERITLLLCSNASGDKLLKPLLVNKNLKPRALKGMDLKKLPVHWMANKKAWVTASLF 269 HSP 2 Score: 121.709 bits (304), Expect = 7.137e-71 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTYLEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 F EWF F+PEV+ YM K LEFK+LLLIDNAPGH +EH NVK++FLPPNTTSLL+P DQGIIA KTYY+K +F++I Sbjct: 269 FKEWFEKCFVPEVRGYMISKNLEFKVLLLIDNAPGHPVIEHPNVKVLFLPPNTTSLLQPLDQGIIAALKTYYIKHSFRFI 348 HSP 3 Score: 65.0846 bits (157), Expect = 7.137e-71 Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 1159 KTSISIY*NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEV 1455 K S N+L+++ AI VI AWK F++ +C+ + IAV + +TL+ CWK +W + V Y+ I L+ ++GG GF+D+ +DI E+ Sbjct: 342 KHSFRFILNKLESNSAINVISAWKDFNVKNCIDCIKIAV-KDITKTTLSKCWKNLWQDVVLQEESDNEGLVTYAEIFELAKSIGGEGFDDMDIDDINEL 439
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Match: A0A384C0Q3 (tigger transposable element-derived protein 1-like OS=Ursus maritimus OX=29073 GN=LOC103662117 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.704e-62 Identity = 42/89 (47.19%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 947 EWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHTYLE----HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQ----AFQYIRMN 1189 +WF+ FIPEV+ Y++ + L FK+LL++DNAP H E H NV+++F+PPNTTSL++P DQGII FK +Y ++ AF+ ++ N Sbjct: 275 DWFHNCFIPEVECYLQGRNLAFKVLLILDNAPVHCCEELKNAHPNVEVLFMPPNTTSLIQPLDQGIIKAFKAHYTRELYSKAFEALKSN 363 HSP 2 Score: 78.1814 bits (191), Expect = 4.704e-62 Identity = 38/114 (33.33%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 1189 LKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD----NNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVI--SNESLMEVALEGT 1512 LK++ T++D WK ++ + + +V A +K +T+N+CWK VWP+CV+D + I NI+++++ + G GF+D+ ED+EE++ + + +NE L E+A +GT Sbjct: 360 LKSNTETTMLDYWKSVTLRNVIDYVGTA-WDSIKQATINSCWKNVWPDCVQDFEGFEDVTETIKDSVKNIMHIAHQITGEGFDDMKEEDVEEILTEKAVEPTNEDLDEMAKQGT 472 HSP 3 Score: 55.8398 bits (133), Expect = 4.704e-62 Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 3 Query: 705 VFLKENAKKN-VTRSQKVASGFKASKERITLF-CSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFTN 950 +F K+ K+ +TR A GFK+ ++ TL C+N D KPL + + P A+ K+V + VHW N KAW+T+ F N Sbjct: 196 LFYKDVGKRTYITRMACKAPGFKSFQDYATLLLCTNAKGDFKCKPLMVYRAQNPPALTGKSVNHMPVHWRWNKKAWMTSDWFHN 279 HSP 4 Score: 53.9138 bits (128), Expect = 4.704e-62 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKY-SYVRCCVMEKTEKALAVWIAD-NNQKQVPLDGNTIKQKALHIYAGIKQLQ 488 ++K+ + L KI++LD++ +G S + +G+ F+ NE+ IR IK+ + R V S K S VR MEK EK L +WI + K+ +D ++ KA IY + Q Q Sbjct: 15 KRKKAVMCLMEKIRVLDKLRSGMSCSAVGREFNVNESTIRYIKKKEKEIRRSVREAAPESAKVTSIVREEAMEKMEKRLNLWIHEMTTDKKGVVDSIVVRLKAKEIYGHVTQGQ 128 HSP 5 Score: 49.2914 bits (116), Expect = 4.704e-62 Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFF 712 FSAS GWL F R ++N+ + E SA+ +A F + L +I+E G +V NADETG F Sbjct: 134 FSASAGWLARFKRRYGVNNVKLAGEANSADQDAAEGFKKYLLNVIQEKGYVEEQVFNADETGLF 197
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006798.1 (pep scaffold:Pmarinus_7.0:GL478691:31611:33359:1 gene:ENSPMAG00000006139.1 transcript:ENSPMAT00000006798.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.1814 bits (191), Expect = 2.258e-32 Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 947 EWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPG---HTYLEHTNVKIVFLPPNTTSLLRPQDQ-GIIATFKTYYLKQAFQYI 1180 +WF F+ E + Y ++ L FK+LL++DNAPG H + NV+++ LPPNT SLL+P DQ G+++TFK YYL++ + Sbjct: 209 DWFTQHFLVESERYCRKENLAFKVLLILDNAPGYPKHLANINPNVRVLLLPPNTASLLQPLDQGGVVSTFKAYYLRRTISQL 290 HSP 2 Score: 60.4622 bits (145), Expect = 2.258e-32 Identity = 29/83 (34.94%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 1210 TVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVI 1458 TV D WK ++I D + + + +K ST+N W A+W ECV NC +ST ++++L +GG GF D+ +D+ E++ Sbjct: 301 TVRDCWKAYNIRDAINNIK-SSWDDVKQSTMNCAWNAIWKECVIYLNCFPEMSTAVQDVVDLGRELGGEGFSDMREDDVLELL 382 HSP 3 Score: 38.5058 bits (88), Expect = 2.258e-32 Identity = 15/42 (35.71%), Postives = 24/42 (57.14%), Query Frame = 3 Query: 825 LKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFTN 950 L + +N++ PRA+K + L VHW AN AW+T + + Sbjct: 168 LHAITVNRSLNPRALKGLSRNMLPVHWTANKMAWMTGQIMED 209 HSP 4 Score: 74.3294 bits (181), Expect = 1.584e-19 Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 150 LRKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSF-KYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQ 482 +++KR ++LE K++IL R E G+ LG+ F+ E+ IR I +N + VM T LS K + VR ++EK EK L VW+ D QK++ + + + KA+ +Y ++Q Sbjct: 8 MKRKRTALTLEVKLEILRRAEAGEGPAALGRAFNLGESTIRAINKNSAKIRSSVMHSTPLSAKKTTRVRNPLLEKMEKMLVVWVEDQYQKKIHISSSATRAKAMELYERLQQ 119 HSP 5 Score: 39.2762 bits (90), Expect = 1.584e-19 Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARI 652 F AS GW F+NR ++H++ + E SA+ ++A +FPE+L I Sbjct: 128 FLASKGWFDKFINRQNLHSIKVTGESASADREAAAKFPEELHAI 171
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003283.1 (pep scaffold:Pmarinus_7.0:GL479064:1419:3178:1 gene:ENSPMAG00000003000.1 transcript:ENSPMAT00000003283.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 76.2554 bits (186), Expect = 2.453e-29 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 974 EVKVYMEEKGLEFKILLLIDNAPGHT-YLE--HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAF 1171 E++ Y + K +FKILL++DNAP H Y+ +K+VFLPP+TTSLL+P QG+IA FK YYL++ F Sbjct: 254 ELRRYCKRKNQDFKILLVVDNAPSHPPYIVDLSEQIKVVFLPPHTTSLLQPMGQGVIAAFKAYYLRRTF 322 HSP 2 Score: 70.4774 bits (171), Expect = 2.453e-29 Identity = 71/283 (25.09%), Postives = 130/283 (45.94%), Query Frame = 3 Query: 156 KKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQLQPSDSTRPRKLFFLQVQGG*EHF*TETRSITYKSNVK*AQLTINLLKNXXXXXXXXXXXXDALHKKFVMQMKLVFLKENAKKNVTRSQKVASGFKASKERIT-LFCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVFTNGSIRFLFQKLKCIWKKK 1001 KKRK I+LE K+ ++ R E + + ++ + E+ +RT R LR + S + R ++E+TE+ L++WI +++ TIKQKAL IY +K+ D+ +P + G + F +T ++ A + N PDAL++ + E + + A G +A+K+R+T + +N S LKP+ ++ + PR +K L VH+ ++ + W+T +FT+ + L +L+ K+K Sbjct: 10 KKRKAITLEQKLDVIKRYERNERTHDIIRTTGLTESTLRTSSRCRK-KLRKANISASRSVR---ARPKIVEETERLLSLWIESQTKRRSGPSFLTIKQKALSIYEDLKKKCKPDNVQPFNASSEWLAGFKKRFDLHNAKLTVEAASADAAVAANF--------------PDALNR---------VIDEGG---YSPDRATAPGLRAAKDRLTVMLGANASGGYRLKPVVVHHSANPRTLKGFVRADLGVHFRSSKRGWMTDQMFTDYVLETLQDELRRYCKRK 262
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003106.1 (pep scaffold:Pmarinus_7.0:GL476998:37517:41189:1 gene:ENSPMAG00000002845.1 transcript:ENSPMAT00000003106.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 89.3521 bits (220), Expect = 9.577e-26 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH-TYLE--HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAF 1171 F EWF +F+P VK Y L FK +L++DNAP H +E N+K+VFL PNTT+LL+P DQG++++FK YYL+Q F Sbjct: 212 FEEWFRVYFVPAVKEYCRTNNLAFKAILVLDNAPCHPVSVEGFDPNIKVVFLTPNTTALLQPMDQGVMSSFKAYYLRQTF 291 HSP 2 Score: 35.4242 bits (80), Expect = 9.577e-26 Identity = 20/46 (43.48%), Postives = 27/46 (58.70%), Query Frame = 1 Query: 1210 TVIDAWKKFSIMDCVKFVNIAVI-HGLKPSTLNACWKAVWPECVKD 1344 T+ + WK FSI+D VK NIA +K S LN W+ + PE V + Sbjct: 305 TLTEFWKGFSILDAVK--NIAASWKEMKQSNLNGVWRKLCPEFVSN 348 HSP 3 Score: 29.6462 bits (65), Expect = 9.577e-26 Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 858 PRAMKNKNVKTLHVHWMANNKAWVTALVF 944 PRA+K TL V W +N KA VT +F Sbjct: 184 PRALKGYTKNTLPVIWKSNPKARVTGAIF 212 HSP 4 Score: 49.2914 bits (116), Expect = 2.506e-12 Identity = 29/114 (25.44%), Postives = 57/114 (50.00%), Query Frame = 3 Query: 138 RLCLLRKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIK 479 R ++ RK ++LE K +I+ +NG+S+T + ++ + + TI ++ + L V + Y R ++ + EK L VW+ D + VP+ I+ KA ++ +K Sbjct: 4 RYSKTKRSRKSVTLEIKYKIIKLADNGESNTEIARKLELPRTTVVTILKDKARILEEVKGQAPMQAAYIRQRAGLIAEMEKHLIVWLDDQTRHHVPVSLAIIQAKARSLFEHLK 117 HSP 5 Score: 40.0466 bits (92), Expect = 2.506e-12 Identity = 21/57 (36.84%), Postives = 29/57 (50.88%), Query Frame = 2 Query: 494 RFNAAKKTVFSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEA 664 R ++ F AS GW F +R H + +K E SA+ +A +F LA IIEE Sbjct: 120 RGEGSQSETFQASKGWFNRFKSRFKFHEMRVKGEAKSADVATAGDFSRTLAEIIEEG 176
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005921.1 (pep scaffold:Pmarinus_7.0:GL487978:976:2666:1 gene:ENSPMAG00000005352.1 transcript:ENSPMAT00000005921.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 92.8189 bits (229), Expect = 4.965e-23 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 941 FYEWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGH-TYLE--HTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQ 1165 F +WF FIP+V+ Y ++G+ FKILL+IDNAP H +L+ H N+K+VFLPPN TS+L+P DQG+ A K YYL++ Sbjct: 219 FEDWFINCFIPDVEKYCRDEGIPFKILLVIDNAPSHPAHLDDFHPNIKVVFLPPNATSVLQPMDQGVNAKCKAYYLRR 296 HSP 2 Score: 32.7278 bits (73), Expect = 4.965e-23 Identity = 15/34 (44.12%), Postives = 20/34 (58.82%), Query Frame = 3 Query: 858 PRAMKNKNVKTLHVHWMANNKAWVTALVFTNGSI 959 PRA K + TL V++ AN AWVT +F + I Sbjct: 191 PRAFKGISKATLPVYFRANPTAWVTVAIFEDWFI 224
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005656.1 (pep scaffold:Pmarinus_7.0:GL476578:539135:542172:1 gene:ENSPMAG00000005132.1 transcript:ENSPMAT00000005656.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 58.9214 bits (141), Expect = 6.388e-23 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 3 Query: 735 VTRSQKVASGFKASKERITLFC-SNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVTALVF 944 ++R +K A GFKASK+R+ L +N + D LKPL + + PRA+K L V W +N K W+TA VF Sbjct: 203 LSREEKTAPGFKASKDRLALLVGANAAGDCKLKPLLVYHSKTPRALKGCIKADLPVIWRSNKKGWITASVF 273 HSP 2 Score: 47.3654 bits (111), Expect = 6.388e-23 Identity = 26/74 (35.14%), Postives = 39/74 (52.70%), Query Frame = 2 Query: 503 AAKKTVFSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKC 724 +A F ASTGW F R ++ +L + E A+ ++A F L IIE G +P +V N +ETG F ++ Sbjct: 124 SAANETFGASTGWYAKFKGRYNLRHLKMTGETAGADVEAAEAFKSTLKEIIEGGGYSPEQVFNVNETGLFWKRM 197 HSP 3 Score: 38.891 bits (89), Expect = 6.388e-23 Identity = 25/100 (25.00%), Postives = 52/100 (52.00%), Query Frame = 3 Query: 171 ISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTI-KRNDSINLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIY 467 +++ K I+ R E G++ ++ K + + I K +++I R + ++ K + R +ME E++L +WI N+ ++PL I+ KAL ++ Sbjct: 15 LTINMKKYIIRRYEGGETVRDISKSLGLATSTVCGIHKASENIKARAQRMTPLVAAKLTRKRSPLMENMEESLGMWIKHQNEHRMPLSTALIQAKALRLF 114
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000031980.1 (pep primary_assembly:ASM223467v1:3:6881985:6888319:-1 gene:ENSORLG00000025652.1 transcript:ENSORLT00000031980.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 96.2857 bits (238), Expect = 1.257e-42 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 947 EWFNTFFIPEVKVYMEEKGLEFKILLLIDNAPGHT-YLEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 +WF FIP+VK Y+ KGL+FK+LLL+DNA GH L + V+I FLPPNTTSL++P DQGII FK Y + Q++ Sbjct: 201 DWFKNCFIPQVKCYLRGKGLDFKVLLLVDNAGGHADDLAYDCVQIKFLPPNTTSLIQPMDQGIIRAFKALYTRNTLQHL 279 HSP 2 Score: 61.2326 bits (147), Expect = 1.257e-42 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 735 VTRSQKVASGFKASKERITLF-CSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVT 932 + + + A GFKA K+R+TL C N + M+KP I ++ PRA+KNKN LHV WM N KAW+T Sbjct: 130 IMQEEAKAPGFKAQKDRLTLVKCGNAA-GFMIKPGLIYRSKNPRALKNKNKDDLHVCWMYNAKAWMT 195 HSP 3 Score: 46.595 bits (109), Expect = 1.257e-42 Identity = 19/54 (35.19%), Postives = 35/54 (64.81%), Query Frame = 1 Query: 1183 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKD 1344 + + +D+ ++ D W+ ++I C++ + A I +K TLNACWK +WPE V++ Sbjct: 281 DAMDSDQDSSLKDYWRGYTIASCLQNIQRA-IQEMKTETLNACWKKLWPEAVQN 333 HSP 4 Score: 30.0314 bits (66), Expect = 1.257e-42 Identity = 21/72 (29.17%), Postives = 30/72 (41.67%), Query Frame = 2 Query: 506 AKKTVFSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERK 721 A+ F+AS GW F + ++N K IIEE G P ++ N DETG F ++ Sbjct: 72 AEPCAFNASKGWFENFKKQAFVNN--------------------KFKAIIEEGGYKPEQIFNIDETGLFWKR 123
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000036785.1 (pep primary_assembly:ASM223467v1:22:11796267:11802170:-1 gene:ENSORLG00000024024.1 transcript:ENSORLT00000036785.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 97.0561 bits (240), Expect = 4.199e-41 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 2 Query: 950 WFNTFFIPEVKVYMEEKGLEFKILLLIDNAPG-HTYLEHTNVKIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 WF FIPEVK Y+ EKGL+FK+LLLIDNA G L H V+I FLPPNT+SL++P DQGII TFK Y + Q++ Sbjct: 241 WFKGCFIPEVKGYLTEKGLDFKVLLLIDNAGGFADDLSHDGVQIEFLPPNTSSLIQPMDQGIIRTFKALYTRNTLQHL 318 HSP 2 Score: 62.003 bits (149), Expect = 4.199e-41 Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 744 SQKVASGFKASKERITL-FCSNVSRDRMLKPLFINKTFKPRAMKNKNVKTLHVHWMANNKAWVT 932 SQ ASGF+ K+R+TL C N + M+KP I++ PRA+KNKN+ L V+WM N AW+T Sbjct: 172 SQAKASGFRGQKDRVTLVMCGNAA-GFMIKPGLISRLKNPRALKNKNMSALPVYWMHNTMAWMT 234 HSP 3 Score: 50.447 bits (119), Expect = 4.199e-41 Identity = 27/114 (23.68%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 1189 LKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNI--------INLSNAVGGIGFEDLAFEDIEEVI--LDPVISNESLMEVA 1500 + +D+ + D W++++I C++ + A +K TLN CW+ +WPE V + P + I ++L+ + G GF+++ +D+ +I +++E L E+ Sbjct: 322 MDSDQNFSFKDYWREYTIASCLQHIQRAH-QEMKSETLNGCWEKLWPEAVHN-----PTESRLDEIHRSVVETAVSLAKRLRGDGFDEITSDDVNSLIDAHSQPLTDEDLAEMT 429
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000029563.1 (pep primary_assembly:ASM223467v1:22:22280271:22280612:-1 gene:ENSORLG00000027274.1 transcript:ENSORLT00000029563.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 45.4394 bits (106), Expect = 9.754e-6 Identity = 27/92 (29.35%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDS---INLRYVMVGT*LSFKYSYVRCCVMEKTEKALAVWIADNNQKQ 419 ++++K ++L KI++LD++ G S + +G+ + NE+ +R IK+N+ ++ V G+ + + VR + K E ALA W D +K+ Sbjct: 17 KRQKKVLTLHEKIELLDKLMGGKSYSAVGRHYGLNESTVRYIKKNEKEVRSSVASVFCGS--AKMVNVVRDKTIVKMESALAFWFQDLRKKK 106
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000058229.1 (SMESG000058229.1) HSP 1 Score: 199.904 bits (507), Expect = 8.171e-57 Identity = 99/133 (74.44%), Postives = 110/133 (82.71%), Query Frame = 1 Query: 1117 TRSRYNCHV*NLLFKTSISIY*NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVISNESLMEVALEGTD 1515 + +RYNCHV K + +EL+NDR I VIDAWKKFSIMDC+K +NIAV +PSTLNACWKAVWPEC+KDNNCVLP+STEYSNIINLSNAV GIGFEDLAFEDIEEVILD IS ESL+EVALEGTD Sbjct: 83 SANRYNCHVKTYYLKQAFQYILDELENDRTIIVIDAWKKFSIMDCLKLLNIAV---HEPSTLNACWKAVWPECIKDNNCVLPLSTEYSNIINLSNAVRGIGFEDLAFEDIEEVILDLFISEESLIEVALEGTD 212
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000058229.1 (SMESG000058229.1) HSP 1 Score: 180.644 bits (457), Expect = 4.653e-50 Identity = 89/111 (80.18%), Postives = 96/111 (86.49%), Query Frame = 1 Query: 1183 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVISNESLMEVALEGTD 1515 N +R I VIDAWKKFSIMDC+K +NIAV +PSTLNACWKAVWPEC+KDNNCVLP+STEYSNIINLSNAV GIGFEDLAFEDIEEVILD IS ESL+EVALEGTD Sbjct: 80 NSFSANRTIIVIDAWKKFSIMDCLKLLNIAV---HEPSTLNACWKAVWPECIKDNNCVLPLSTEYSNIINLSNAVRGIGFEDLAFEDIEEVILDLFISEESLIEVALEGTD 187
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000032104.1 (SMESG000032104.1) HSP 1 Score: 107.457 bits (267), Expect = 5.652e-26 Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 1183 NELKNDRAITVIDAWKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEVILDPVISNESLMEVALEGTDLQFFYK 1533 +E+ +D ++TV WK F+I+DCVK V +AV L+PSTLN WK +WPE V NN + P+ EY I++L++++GG GFEDLA +D++E +++P + E +L+ +Q K Sbjct: 133 DEMDSDSSLTVSQVWKNFTILDCVKIVALAV-EELRPSTLNGSWKPIWPEVVLLNNRIQPVVDEYRAIVDLAHSLGGEGFEDLAIQDVKEFLVEPNLGEEEKRTKSLDLMTIQIMQK 248 HSP 2 Score: 55.0694 bits (131), Expect = 5.511e-17 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 363 MEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQLQPS 494 ME EKAL +WI DN QK++PLDGN I+ KA+ I+ +K+ +P+ Sbjct: 1 MEMMEKALMIWIEDNTQKRMPLDGNVIRYKAVKIFNHLKETRPA 44 HSP 3 Score: 51.9878 bits (123), Expect = 5.511e-17 Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKCQKERD 739 FS S GW F R S+HN+ ++ EI SA++ +A FP++LA+IIEE G T AD+ + + +K D Sbjct: 67 FSGSKGWFENFEKRFSLHNVKLQGEIASADEAAAKIFPKELAKIIEEHGYT------ADQAYYIRQTFKKILD 133
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000071434.1 (SMESG000071434.1) HSP 1 Score: 78.5666 bits (192), Expect = 2.623e-24 Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = 3 Query: 153 RKKRKCISLETKIQILDRIENGDSSTNLGKRFDANEAMIRTIKRNDSINLRYVMVGT*LSFKYSY-VRCCVMEKTEKALAVWIADNNQKQVPLDGNTIKQKALHIYAGIKQLQPSDSTRPRKLFFLQVQG 539 RK + ++ K QILDR+ G+ ++++ K + NEA +RTIK+ + V G LS KYS +R ++EK EKAL++WI D+ Q+++ LD N I+QKAL Y +KQ + S S P FL +G Sbjct: 126 RKWSSKLMMKMKKQILDRLLKGEKASHIAKTLNLNEATVRTIKKKEKEIRCAVAAGCSLSSKYSSRLRVPIIEKMEKALSIWINDSCQERIRLDSNIIRQKALKTYNYLKQNRES-SVNPD---FLASKG 251 HSP 2 Score: 53.1434 bits (126), Expect = 2.623e-24 Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAGCTP*KVCNADETGFFERKC 724 F AS GWL ++H + I+ EI SA +A +PEK+ +IIE+ G T +V NADE G +KC Sbjct: 246 FLASKGWLERVKKWFTLHKIKIQGEIASAYHAAAISYPEKILKIIEDQGYTWKQVFNADEIGLRWQKC 313
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Match: SMESG000057528.1 (SMESG000057528.1) HSP 1 Score: 76.6406 bits (187), Expect = 3.617e-24 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 1225 WKKFSIMDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINLSNAVGGIGFEDLAFEDIEEV 1455 WKKF+I+DC+ V A I+ ++P TLN CWKA+WPECV N + IS E II L++ GG GFE DIEE+ Sbjct: 154 WKKFTILDCINHVANA-INQIRPMTLNLCWKAIWPECVTGNGTIAEISDE---IIALAHLFGGEGFETFNQNDIEEL 226 HSP 2 Score: 54.299 bits (129), Expect = 3.617e-24 Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 1073 KIVFLPPNTTSLLRPQDQGIIATFKTYYLKQAFQYI 1180 +I+F+PPN TSL++P DQGIIA FK YY+K ++ I Sbjct: 105 QILFIPPNMTSLIQPLDQGIIAPFKKYYIKSTYESI 140 HSP 3 Score: 53.1434 bits (126), Expect = 2.705e-7 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 521 FSASTGWLRAFLNRNSIHNL*IKCEIGSANDKSA*EFPEKLARIIEEAG 667 F AS GWL FL RN+ HNL I+ ++ S N + A +FPEK+ +IIE+ G Sbjct: 53 FIASNGWLSGFLKRNAFHNLKIRVDVASTN-QEAKKFPEKMIKIIEDGG 100 The following BLAST results are available for this feature:
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 3
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of HTH CENPB-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of HTH CENPB-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of HTH CENPB-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008448 ID=SMED30008448|Name=HTH CENPB-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1647bpback to top protein sequence of SMED30008448-orf-1 >SMED30008448-orf-1 ID=SMED30008448-orf-1|Name=SMED30008448-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=135bp MDCVKFVNIAVIHGLKPSTLNACWKAVWPECVKDNNCVLPISTEYSNIINback to top Annotated Terms
The following terms have been associated with this transcript:
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