Nuclear and cytoplasmic polyadenylated RNA-binding protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30008437 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 155.221 bits (391), Expect = 1.334e-41 Identity = 109/347 (31.41%), Postives = 179/347 (51.59%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK-----NAAAGGNM---NKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A + P +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ +N +VY + L+E ++R TF FG+I I+ FP+K ++FV +++H++AA+AI +NG I +KC WGK+ N N +P G Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA-------TTP---SSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYG-QWGQWYGNAQ---------QIGQYMPNGWQVPAY 321
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 151.754 bits (382), Expect = 3.085e-40 Identity = 105/349 (30.09%), Postives = 176/349 (50.43%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK-----NAAAGGNMNKPMG-NQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A Q +S+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ +N +VY + L+E ++R TF FG+I I+ FP+K ++FV +++H++AA+AI +NG I +KC WGK+ N + P Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQIGYPQPYGQWGQWYGNAQ---------QIGQYMPNGWQVPAY 331
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Human
Match: TIA1 (TIA1 cytotoxic granule associated RNA binding protein [Source:HGNC Symbol;Acc:HGNC:11802]) HSP 1 Score: 150.984 bits (380), Expect = 5.647e-40 Identity = 107/351 (30.48%), Postives = 178/351 (50.71%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK-----NAAAGGNM---NKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A Q +S+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ +N +VY + L+E ++R TF FG+I I+ FP+K ++FV +++H++AA+AI +NG I +KC WGK+ N N +P G Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYG-QWGQWYGNAQ---------QIGQYMPNGWQVPAY 332
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Human
Match: TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:11804]) HSP 1 Score: 148.288 bits (373), Expect = 3.682e-39 Identity = 99/311 (31.83%), Postives = 156/311 (50.16%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK---PMGNQMNQYYDNSQ 957
+T+YV NL ++E +L +F G C SC++ E +S ++EF D MN +EV+ + +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +TK L E++ ++ N +VY +A L++ ++R TF FG+I I+ FPEK ++FV + TH++AA+AI +NG I +KC WGK++ N + Q +Q Y N Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEF---------YEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 304
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Human
Match: TIAL1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:11804]) HSP 1 Score: 140.584 bits (353), Expect = 3.246e-36 Identity = 99/319 (31.03%), Postives = 155/319 (48.59%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLET-------SSAYIEFDNELSAE-----KALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK---PMGNQMNQYYDNSQ 957
+T+YV NL ++E +L +F G C SC++ E SS S + + D MN +EV+ + +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +TK L E++ ++ N +VY +A L++ ++R TF FG+I I+ FPEK ++FV + TH++AA+AI +NG I +KC WGK++ N + Q +Q Y N Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 321
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 147.902 bits (372), Expect = 4.376e-39 Identity = 92/280 (32.86%), Postives = 149/280 (53.21%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVM-AENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGK 882
+T+YV NL S ++E+ + ++F G ++ + S+ A++EF + A +AL MN + +M V A VE Q + K+D + +FVG + ++D KL++ F G V DAKV+R + + KG+ FVS+ +EA AI+ MN R I+ NWAT+ P +++ + K+ +EI + NTSVYV +L+ED +R F FG+I ++ F + +AFV +D DAAA AI Q+N + ++C+WGK
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWA-VEPGQQQS-------KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK------PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 311
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Celegans
Match: tiar-2 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q9U2F5]) HSP 1 Score: 137.887 bits (346), Expect = 2.342e-35 Identity = 97/310 (31.29%), Postives = 159/310 (51.29%), Query Frame = 1
Query: 49 SKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAY--VEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPD-GQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMA------------FGQSTKTLEEISYEAPETNTSVYVM-AENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKP 918
S++ +T++V+NL I++E L ++F G + ++ E + A++EF + A AL + N + +M+V A+ E +N + K + S +FVG + +ID KL++ F G+V +AK++R + + KG+ FVS+ ++A AI MN R I+ NWAT+ + +G + QS KT +EI +A NTSVYV NL ED +R F+RFG I ++ F + +AFV ++T ++AA AI Q+N I ++C+WGK G+ KP
Sbjct: 36 SEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRS-------KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKS-----GDSGKP 333
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 127.872 bits (320), Expect = 3.560e-32 Identity = 85/276 (30.80%), Postives = 135/276 (48.91%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVM-AENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGK 882
+T+YV NL S ++E+ + ++F G + + FD +M V A VE Q + K+D + +FVG + ++D KL++ F G V DAKV+R + + KG+ FVS+ +EA AI+ MN R I+ NWAT+ P +++ + K+ +EI + NTSVYV +L+ED +R F FG+I ++ F + +AFV +D DAAA AI Q+N + ++C+WGK
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTK---------VIFD-------------------EMKVNWA-VEPGQQQS-------KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK------PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 279
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 124.02 bits (310), Expect = 2.109e-31 Identity = 68/190 (35.79%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 319 KVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVM-AENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGK 882
K+D + +FVG + ++D KL++ F G V DAKV+R + + KG+ FVS+ +EA AI+ MN R I+ NWAT+ P +++ + K+ +EI + NTSVYV +L+ED +R F FG+I ++ F + +AFV +D DAAA AI Q+N + ++C+WGK
Sbjct: 25 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK------PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 208
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 123.635 bits (309), Expect = 2.178e-31 Identity = 68/190 (35.79%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 319 KVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVM-AENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGK 882
K+D + +FVG + ++D KL++ F G V DAKV+R + + KG+ FVS+ +EA AI+ MN R I+ NWAT+ P +++ + K+ +EI + NTSVYV +L+ED +R F FG+I ++ F + +AFV +D DAAA AI Q+N + ++C+WGK
Sbjct: 15 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK------PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 198
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084592) HSP 1 Score: 141.739 bits (356), Expect = 2.284e-36 Identity = 94/311 (30.23%), Postives = 159/311 (51.13%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKK-------------------MAFGQSTKTLEEISYEAPETNTSVYVMA---ENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAA 894
M+ KT+YV NL S +SE+ L+++F + G SC++ E + A+IE+ N +A AL AMN ++ V A Q K D S+ IFVG + +I+ L++ F+ G++ + ++VR P + KG+AFVSF + EA AIQ+MN +R I+ NW+T+ +PP ++ G T EE+ ++ TNT+VY +S+D++ F +FG I++++ F +K +F+ + T +AAA+AI+ + +++ +KC WGK+N
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQ---------PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK-----LPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0084594) HSP 1 Score: 141.739 bits (356), Expect = 2.284e-36 Identity = 94/311 (30.23%), Postives = 159/311 (51.13%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKK-------------------MAFGQSTKTLEEISYEAPETNTSVYVMA---ENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAA 894
M+ KT+YV NL S +SE+ L+++F + G SC++ E + A+IE+ N +A AL AMN ++ V A Q K D S+ IFVG + +I+ L++ F+ G++ + ++VR P + KG+AFVSF + EA AIQ+MN +R I+ NW+T+ +PP ++ G T EE+ ++ TNT+VY +S+D++ F +FG I++++ F +K +F+ + T +AAA+AI+ + +++ +KC WGK+N
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQ---------PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK-----LPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333200) HSP 1 Score: 141.354 bits (355), Expect = 3.037e-36 Identity = 94/311 (30.23%), Postives = 159/311 (51.13%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKK-------------------MAFGQSTKTLEEISYEAPETNTSVYVMA---ENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAA 894
M+ KT+YV NL S +SE+ L+++F + G SC++ E + A+IE+ N +A AL AMN ++ V A Q K D S+ IFVG + +I+ L++ F+ G++ + ++VR P + KG+AFVSF + EA AIQ+MN +R I+ NW+T+ +PP ++ G T EE+ ++ TNT+VY +S+D++ F +FG I++++ F +K +F+ + T +AAA+AI+ + +++ +KC WGK+N
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQ---------PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK-----LPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333202) HSP 1 Score: 141.354 bits (355), Expect = 3.037e-36 Identity = 94/311 (30.23%), Postives = 159/311 (51.13%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKK-------------------MAFGQSTKTLEEISYEAPETNTSVYVMA---ENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAA 894
M+ KT+YV NL S +SE+ L+++F + G SC++ E + A+IE+ N +A AL AMN ++ V A Q K D S+ IFVG + +I+ L++ F+ G++ + ++VR P + KG+AFVSF + EA AIQ+MN +R I+ NW+T+ +PP ++ G T EE+ ++ TNT+VY +S+D++ F +FG I++++ F +K +F+ + T +AAA+AI+ + +++ +KC WGK+N
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQ---------PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK-----LPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Fly
Match: Rox8 (gene:FBgn0005649 transcript:FBtr0333201) HSP 1 Score: 141.354 bits (355), Expect = 3.037e-36 Identity = 94/311 (30.23%), Postives = 159/311 (51.13%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS---AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKK-------------------MAFGQSTKTLEEISYEAPETNTSVYVMA---ENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAA 894
M+ KT+YV NL S +SE+ L+++F + G SC++ E + A+IE+ N +A AL AMN ++ V A Q K D S+ IFVG + +I+ L++ F+ G++ + ++VR P + KG+AFVSF + EA AIQ+MN +R I+ NW+T+ +PP ++ G T EE+ ++ TNT+VY +S+D++ F +FG I++++ F +K +F+ + T +AAA+AI+ + +++ +KC WGK+N
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQ---------PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK-----LPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG 297
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Zebrafish
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 162.925 bits (411), Expect = 4.932e-45 Identity = 105/306 (34.31%), Postives = 163/306 (53.27%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQ 930
M+ +T+YV NL ++E +L +F G C SC++ L+T+ ++EF +N +A AMN + M V A S P +S+K D S +FVG + +I ++ F+ G++ DA+VVR G+ KG+ F+SF N+ +A +AIQ MN R+I+ NWAT+ + K G S+K L EE+ ++ +N +VY +A LS+ ++R TF FG+I I+ FPEK ++FV +D+H+ AA+AI +NG I +KC WGK+ A PM Q
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAAAALAAMNGRKILGKDMKVNWA-------STP---SSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAP-----KSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQ 293
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Zebrafish
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 161.384 bits (407), Expect = 2.222e-44 Identity = 104/306 (33.99%), Postives = 163/306 (53.27%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQ 930
M+ +T+YV NL ++E +L +F G C SC++ L+T+ ++EF +N +A AMN + M V A S P +S+K D S +FVG + +I ++ F+ G++ DA+VV+ G+ KG+ F+SF N+ +A +AIQ MN R+I+ NWAT+ + K G S+K L EE+ ++ +N +VY +A LS+ ++R TF FG+I I+ FPEK ++FV +D+H+ AA+AI +NG I +KC WGK+ A PM Q
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAAAALAAMNGRKILGKDMKVNWA-------STP---SSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAP-----KSNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMPMPQQ 293
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Zebrafish
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]) HSP 1 Score: 159.844 bits (403), Expect = 2.308e-43 Identity = 106/353 (30.03%), Postives = 180/353 (50.99%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNA--------------AAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
M+ + KT+YV NL ++E ++ +FG G C SC++ ++T+ ++EF A +LA MN + ++ V A ++P +S+K D S +FVG + +I ++ F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ +N +VY + L+E ++R TF FG+I ++ FP+K ++FV +++H++AA+AI +NG + +KC WGK+ + G +P G Q Q+Y N+Q PN +QVP +
Sbjct: 2 MDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA-------TSP---SSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTDMVSPMQQVQVPQQSKVGFAAQPYG-QWGQWYGNAQ---------QISQYVPNGWQVPTY 328
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Zebrafish
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]) HSP 1 Score: 153.68 bits (387), Expect = 3.397e-41 Identity = 104/347 (29.97%), Postives = 175/347 (50.43%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNA--------------AAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
K YV NL ++E ++ +FG G C SC++ ++T+ ++EF A +LA MN + ++ V A ++P +S+K D S +FVG + +I ++ F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ +N +VY + L+E ++R TF FG+I ++ FP+K ++FV +++H++AA+AI +NG + +KC WGK+ + G +P G Q Q+Y N+Q PN +QVP +
Sbjct: 8 KCRYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA-------TSP---SSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTDMVSPMQQVQVPQQSKVGFAAQPYG-QWGQWYGNAQ---------QISQYVPNGWQVPTY 328
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Zebrafish
Match: tial1 (TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]) HSP 1 Score: 149.828 bits (377), Expect = 6.832e-40 Identity = 102/319 (31.97%), Postives = 162/319 (50.78%), Query Frame = 1
Query: 43 MESKNN-KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPM----GNQMNQYYDNSQ 957
ME +++ KT+YV NL ++E +L +F G C SC++ E +S ++EF D MN +EV+ + +S+K D S +FVG + +I ++ F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K S K L +E+ ++ N +VY + L+E ++R TF FG+I I+ FPEK ++F+ + +H++AA+AI +NG I +KC WGK++ N+ +PM Q NQ Y N Q
Sbjct: 1 MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEF---------FEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNV-QPMEYGQWGQWNQMYGNPQ 303
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 155.606 bits (392), Expect = 8.101e-42 Identity = 107/349 (30.66%), Postives = 176/349 (50.43%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTK--TLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNS-QMGSY 1056
ME +T+YV NL ++E +L +F G C SC++ ++T+ ++EF A +LA MN + ++ V A + P +S+K D + +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K + +TK T EE+ ++ +N +VY + L+E ++R TF FG+I ++ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ M N + Q + SQ +F P + Q Q+Y + Q+G Y
Sbjct: 1 MEEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA-------TTP---SSQKKDANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPD--------MLNPVQQVSEASQISFP-----------PPYGQWGQWYGGAQQIGQY 314
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 154.066 bits (388), Expect = 3.407e-41 Identity = 107/353 (30.31%), Postives = 175/353 (49.58%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTK--TLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNS-QMGSY 1056
ME +T+YV NL ++E +L +F G C SC++ ++T+ ++EF A +LA MN + ++ V A Q NS+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K + +TK T EE+ ++ +N +VY + L+E ++R TF FG+I ++ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ M N + Q + SQ +F P + Q Q+Y + Q+G Y
Sbjct: 1 MEEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDH---FHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPD--------MLNPVQQVSEASQISFP-----------PPYGQWGQWYGGAQQIGQY 325
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 150.984 bits (380), Expect = 4.852e-40 Identity = 107/347 (30.84%), Postives = 175/347 (50.43%), Query Frame = 1
Query: 55 NNKTI--YVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTK--TLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNS-QMGSY 1056
+ KTI YV NL ++E +L +F G C SC++ ++T+ ++EF A +LA MN + ++ V A + P +S+K D + +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K + +TK T EE+ ++ +N +VY + L+E ++R TF FG+I ++ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ M N + Q + SQ +F P + Q Q+Y + Q+G Y
Sbjct: 5 DTKTILLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWA-------TTP---SSQKKDANNHFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPD--------MLNPVQQVSEASQISFP-----------PPYGQWGQWYGGAQQIGQY 316
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Xenopus
Match: tia1 (TIA1 cytotoxic granule-associated RNA binding protein [Source:NCBI gene;Acc:394890]) HSP 1 Score: 148.288 bits (373), Expect = 6.170e-39 Identity = 104/344 (30.23%), Postives = 170/344 (49.42%), Query Frame = 1
Query: 70 YVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTK--TLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNS-QMGSY 1056
YV NL ++E +L +F G C SC++ ++T+ ++EF A +LA MN + ++ V A Q NS+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K + +TK T EE+ ++ +N +VY + L+E ++R TF FG+I ++ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ M N + Q + SQ +F P + Q Q+Y + Q+G Y
Sbjct: 19 YVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDH---FHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPD--------MLNPVQQVSEASQISFP-----------PPYGQWGQWYGGAQQIGQY 334
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Xenopus
Match: tial1 (Xenopus tropicalis TIA1 cytotoxic granule-associated RNA binding protein-like 1 (tial1), mRNA. [Source:RefSeq mRNA;Acc:NM_001369612]) HSP 1 Score: 142.124 bits (357), Expect = 8.023e-37 Identity = 95/311 (30.55%), Postives = 153/311 (49.20%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETS-----SAYIEF-------DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQY 942
+T+YV NL ++E +L +F G C SC++ E + A + F ++ + D MN +EV+ + +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +TK L E++ ++ N +VY + L+E ++R TF FG+I I+ FPEK ++F+ + THD+AA+AI +NG I +KC WGK+ N + +Q Q+
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNTNNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETPDMTKNFQQVDYSQWGQW 312
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 155.606 bits (392), Expect = 5.987e-42 Identity = 106/346 (30.64%), Postives = 175/346 (50.58%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK-------PMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A + P +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ N +VY + L+E ++R TF FG+I I+ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ + + P Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA-------TTP---SSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQ---------QIGQYVPNGWQVPAY 321
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 154.836 bits (390), Expect = 1.377e-41 Identity = 106/348 (30.46%), Postives = 175/348 (50.29%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSA------YIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK-------PMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++ +A ++EF ++ +A AMN + ++ V A + P +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ N +VY + L+E ++R TF FG+I I+ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ + + P Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA-------TTP---SSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQ---------QIGQYVPNGWQVPAY 323
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 151.754 bits (382), Expect = 1.715e-40 Identity = 104/350 (29.71%), Postives = 174/350 (49.71%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK-------PMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A Q +S+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ N +VY + L+E ++R TF FG+I I+ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ + + P Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQ---------QIGQYVPNGWQVPAY 332
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Mouse
Match: Tia1 (cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]) HSP 1 Score: 151.754 bits (382), Expect = 1.974e-40 Identity = 104/350 (29.71%), Postives = 174/350 (49.71%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK-------PMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A Q +S+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ N +VY + L+E ++R TF FG+I I+ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ + + P Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQ---------QIGQYVPNGWQVPAY 332
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Mouse
Match: Tial1 (Tia1 cytotoxic granule-associated RNA binding protein-like 1 [Source:MGI Symbol;Acc:MGI:107913]) HSP 1 Score: 148.673 bits (374), Expect = 2.286e-39 Identity = 99/311 (31.83%), Postives = 156/311 (50.16%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK---PMGNQMNQYYDNSQ 957
+T+YV NL ++E +L +F G C SC++ E +S ++EF D MN +EV+ + +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +TK L E++ ++ N +VY +A L++ ++R TF FG+I I+ FPEK ++FV + TH++AA+AI +NG I +KC WGK++ N + Q +Q Y N Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEF---------YEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 304
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. UniProt/SwissProt
Match: sp|P52912|TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.200e-39 Identity = 104/350 (29.71%), Postives = 174/350 (49.71%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK-------PMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A Q +S+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ N +VY + L+E ++R TF FG+I I+ FP+K ++FV + +H++AA+AI +NG I +KC WGK+ + + P Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQ---------QIGQYVPNGWQVPAY 332
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. UniProt/SwissProt
Match: sp|P31483|TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens OX=9606 GN=TIA1 PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 2.712e-39 Identity = 107/351 (30.48%), Postives = 178/351 (50.71%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ----NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK-----NAAAGGNM---NKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
ME + KT+YV NL ++E +L +F G C +C++ ++T+ ++EF ++ +A AMN + ++ V A Q +S+ + D+ +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + +TK L +E+ ++ +N +VY + L+E ++R TF FG+I I+ FP+K ++FV +++H++AA+AI +NG I +KC WGK+ N N +P G Q Q+Y N+Q PN +QVP +
Sbjct: 1 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYG-QWGQWYGNAQ---------QIGQYMPNGWQVPAY 332
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. UniProt/SwissProt
Match: sp|Q01085|TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.768e-38 Identity = 99/311 (31.83%), Postives = 156/311 (50.16%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK---PMGNQMNQYYDNSQ 957
+T+YV NL ++E +L +F G C SC++ E +S ++EF D MN +EV+ + +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +TK L E++ ++ N +VY +A L++ ++R TF FG+I I+ FPEK ++FV + TH++AA+AI +NG I +KC WGK++ N + Q +Q Y N Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEF---------YEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 304
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. UniProt/SwissProt
Match: sp|P70318|TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.469e-35 Identity = 99/319 (31.03%), Postives = 155/319 (48.59%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLET-------SSAYIEFDNELSAE-----KALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK---PMGNQMNQYYDNSQ 957
+T+YV NL ++E +L +F G C SC++ E SS S + + D MN +EV+ + +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +TK L E++ ++ N +VY +A L++ ++R TF FG+I I+ FPEK ++FV + TH++AA+AI +NG I +KC WGK++ N + Q +Q Y N Q
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK------PPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQ 321
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. UniProt/SwissProt
Match: sp|Q9SYG4|UBP1A_ARATH (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.297e-29 Identity = 96/303 (31.68%), Postives = 146/303 (48.18%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAY---IEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--------EEISYE-APETN---TSVYVMAENLSEDILRPTFERF------GKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYK-INSIELKCNWGKKNAAAG 900
+++Y N+ + ++E L IF S G SC+L + S+Y FD ++ + +N + M V AY ++ D S+ IFVG + ++ +A L D FS DA+V+ G+ +GF FVSF N+ +A AI MN +R+I+CNWATK G +K + G+S L E+S E APE N T+VYV NLS ++ + R G I+ ++ +K FV Y+THD AA AIQ N + S +++C+WG K +G
Sbjct: 63 RSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYA-----------TGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATK---GATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYV--GNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSG 349
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. TrEMBL
Match: D5JG75 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-1 PE=2 SV=1) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 315/438 (71.92%), Postives = 352/438 (80.37%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEV-QNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPM----GNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNSQMGSYYNSAPNXXXXXXXXXXXXXNSNANFSNP---------QGNFIAQPNLLGQPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQFNTYQ 1332
KTIY+SNLPSPISEEDLLSIFGSFG C+SC+LNLET +AYIEFDNE SAEKALAMN+TPM+SNQM+V IAYV+ V QN Y +ASKKVDYS VQIFVGGIGFDIDEA LK+GF+HCGQV+D KVVR DGQHKGFAFVSFSNE +A +AIQ MNNTMFHNRKIQCNWATK+KN NG P N K + KTLE+ISYEAPE+NTSVYV+ E+L+E++LRP FERFGKIKN+KAFPEKNHAFVNYDTHDAAAYAIQQLNGYKIN+IELKCNWGKKNAA G N+ M GNQMN YYDN+QANF NYQQQ+DQY Q +QVPQ++NN+QMGS+YN PN P FQ NF NP QGNF+AQPNLLGQPK SYG Q K+N KA PK + KPRMNRAPHPYNKPK N NQ+NTYQ
Sbjct: 1 KTIYISNLPSPISEEDLLSIFGSFGACVSCELNLETLTAYIEFDNESSAEKALAMNNTPMESNQMSVEIAYVDNVVQNVTSYTLASKKVDYSQSVQIFVGGIGFDIDEAILKEGFAHCGQVLDTKVVRSNDGQHKGFAFVSFSNESDANSAIQKMNNTMFHNRKIQCNWATKNKNSNGAPFNPKFNPTKFNKTLEDISYEAPESNTSVYVLGESLTEELLRPIFERFGKIKNVKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINNIELKCNWGKKNAALGNANNQSMGNQYGNQMNPYYDNTQANFYNYQQQFDQYYQAG-YQVPQYFNNTQMGSFYNPMPN-----YPQFQNPYGGQQNFINPNQNNYPAPNQGNFVAQPNLLGQPKGSYGAQPKNNFKAGPKG-FPGEPKPRMNRAPHPYNKPKPN--NQYNTYQ 429
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. TrEMBL
Match: D5JG76 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-2 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 5.465e-89 Identity = 177/447 (39.60%), Postives = 261/447 (58.39%), Query Frame = 1
Query: 40 KMESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAY------VEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGN-----------MNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNSQMGSYYNSAP--NXXXXXXXXXXXXXNSNANFSNPQGNFIAQPNLLGQPKVSYGGQLKSNLKAIPKAPISSQTKPRMNR-APHPYNKPKVNNANQF 1320
KME++N KTIY+S LP+ ++EEDLLSIF ++G+C+SC+LN E +AY+EFDNE SA AL+MN M + ++ ++IAY +E Q ++ F+ K D STP QIFVG IG ++DEA L+ GF H G++ID KV+R PDG+ KG+ FV+FS+E EA AI MN T FH+ KI+C+W K+K V NK + ++L++I E P++ T+V+V EN+++++L P F +FG IKNIKAFP+ N +F+NY +H+AAA AI Q+NG+ +N++ELKC+W K+ G + KP + + + + N Y+ +YD + QF + + Y P Y + + Q + N NFS + +FI Q KS P I +Q KP +NR A +PY KP +N +F
Sbjct: 17 KMENRNTKTIYISCLPNSVTEEDLLSIFENYGLCVSCELNSEECTAYVEFDNETSARNALSMNGIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLG--KTDDSTPTQIFVGNIGSNVDEAILEGGFEHLGKIIDTKVIRDPDGKPKGYGFVTFSSEFEAKNAIDRMNETFFHDEKIKCSWG-KNKTNVTVTLNK-----NAVRSLQDILSETPKSYTNVFVTGENVTQEMLEPHFVKFGTIKNIKAFPKNNQSFINYYSHEAAANAIHQMNGFLLNNVELKCSWAIKSEKPGKKIKFTRQQQQPPIKKPRKHLLPKTFSNVTTTRQAYESKYDSGYGGIGGGLSQF--QQSLTNPYQEQPFHPYSLPAVYPNEYQYDDNYNFSTARSHFI---------------QSKSVPNVQPLMGILAQPKPALNRVATNPYRKPILNKPGKF 438
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. TrEMBL
Match: D5JG77 (TIA1-like protein OS=Dugesia japonica OX=6161 GN=TIAL-3 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 4.288e-86 Identity = 149/288 (51.74%), Postives = 195/288 (67.71%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN 888
M KNN+TIYV NLP ++++ L+ IFG+FG CISC + + S A+IE+ + SA AL AM+ M +NQ+ V + P VAS K+DYS VQIFVG IG D+DE LK+GFS GQ+IDAKVVR PDGQ +GFAFVSFSN DEA AIQSM+ T FHNR I+CNWAT+ NG+ + + + + + E + EAP TNT+VYV ENL+E++L F+ FG+I ++K +PEK HAF+N+ TH+AAA AI Q +GYKIN +KCNWGK+N
Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSAMDGIYMWNNQIKVNWSSGPSAV-PGPAAVASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATR----NGLDGEQFIKY--TPRPYELVYKEAPLTNTNVYVAGENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKEN 281 HSP 2 Score: 68.5514 bits (166), Expect = 7.520e-9 Identity = 47/192 (24.48%), Postives = 91/192 (47.40%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKA--FPE---KNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAG 900
I+VG + +++ L F + GQ I ++R Q +AF+ +++ A A+ +M+ N +I+ NW S + VP G + +I Y + ++V + ++ E +L+ F +FG++ + K +P+ + AFV++ D A AIQ ++ ++ +KCNW +N G
Sbjct: 9 IYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSAMDGIYMWNNQIKVNW---SSGPSAVP-------GPAAVASAKIDYS---NSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGLDG 187
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. TrEMBL
Match: D5JG78 (TIA1-like protein (Fragment) OS=Dugesia japonica OX=6161 GN=TIAL-4 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.604e-77 Identity = 137/289 (47.40%), Postives = 191/289 (66.09%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK 885
M+ +NN+TIYV NLP I++ LL IFG+FG C+ C + + S A+IE+ N +A ALA M+ M +NQ+ V + V A +S K+DYS +QIFVG IG D+DEA LK+GFS G V+DAKVVR DGQ +GFAFV+FS D+A AI+ M+ T FHNR I+CNWAT+ NG+ ++ + + + + E + EAP TNT+VY+ + E L+E+++R FE FG+I +K +PEK HAF+N+ TH++AA AI Q +GYKIN +KCNWGK+
Sbjct: 1 MDIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAASLALAAMDGIFMWNNQIKVNWSSGNSVNTVASSLPSSNKIDYSNTIQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNWATR----NGLDGDQFIKY--TPRPYELVYKEAPLTNTNVYIAGIPEGLTEELIRVHFEEFGRIDAVKVYPEKAHAFINFVTHESAARAISQRHGYKINDNVIKCNWGKE 283
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. TrEMBL
Match: A4V6J5 (Polyadenylate-binding protein (Fragment) OS=Dugesia japonica OX=6161 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.168e-57 Identity = 99/195 (50.77%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 40 KMESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAY------VEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNK 606
KME++N KTIY+S LP+ ++EEDLLSIF ++G+C+SC+LN E +AY+EFDNE SA AL+MN M + ++ ++IAY +E Q ++ F+ K D STP QIFVG IG ++DEA L+ GF H G++ID KV+R PDG+ KG+ FV+FS+E EA AI MN T FH+ KI+C+W K+K V NK
Sbjct: 7 KMENRNTKTIYISCLPNSVTEEDLLSIFENYGLCVSCELNSEECTAYVEFDNETSARNALSMNGIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLG--KTDDSTPTQIFVGNIGSNVDEAILEGGFEHLGKIIDTKVIRDPDGKPKGYGFVTFSSEFEAKNAIDRMNETFFHDEKIKCSWG-KNKTNVTVTLNK 198
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 161.77 bits (408), Expect = 1.167e-44 Identity = 103/304 (33.88%), Postives = 160/304 (52.63%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQS-TKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPM 921
M+ KT+YV NL ++E +L +F G C SC++ ++T+ ++EF + A AL AMN + M V A S P +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ F+SF N+ +A AIQ MN R+I+ NWAT+ PP K + TK L EE+ ++ +N +VY + L++ ++R TF FG+I I+ FP+K ++FV +D+H+ AA+AI +NG I +KC WGK+ A PM
Sbjct: 2 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWA-------SMP---SSQKKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRK------PPAPKSNYETGNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMPM 289
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 161.77 bits (408), Expect = 1.167e-44 Identity = 103/304 (33.88%), Postives = 160/304 (52.63%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQS-TKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPM 921
M+ KT+YV NL ++E +L +F G C SC++ ++T+ ++EF + A AL AMN + M V A S P +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ F+SF N+ +A AIQ MN R+I+ NWAT+ PP K + TK L EE+ ++ +N +VY + L++ ++R TF FG+I I+ FP+K ++FV +D+H+ AA+AI +NG I +KC WGK+ A PM
Sbjct: 2 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWA-------SMP---SSQKKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRK------PPAPKSNYETGNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMPM 289
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Cavefish
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:103030475]) HSP 1 Score: 145.976 bits (367), Expect = 1.721e-38 Identity = 93/286 (32.52%), Postives = 151/286 (52.80%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNG-NGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN 888
KT+YV NL ++E +L +F G C SC++ E +S ++EF D MN +EV+ + +S+K D S +FVG + +I ++ F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ V +K++A S+K L E++ ++ N +VY + LSE ++R TF FG+I I+ FPEK ++F+ + +H++AA+AI +NG I S +KC WGK++
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEF---------FEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDSKQIAHLGSSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLIRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIESHIVKCYWGKES 284
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Cavefish
Match: tia1l (TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:103030565]) HSP 1 Score: 129.413 bits (324), Expect = 2.758e-33 Identity = 86/260 (33.08%), Postives = 137/260 (52.69%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVN 792
M+ KT+YV NL ++E +L +F G C SC++ ++T+ ++EF + A AL AMN + M V A S P +S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ F+SF N+ +A AIQ MN R+I+ NWAT+ PP K + +TK L EE+ ++ +N +VY + L++ ++R TF FG+I I+ FP+K ++FV
Sbjct: 1 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAGNDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWA-------SMP---SSQKKDTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRK------PPAPKSNYESNTKHLSYEEVLSQSSPSNCTVYCGGVTSGLTDQLMRQTFSPFGQIMEIRVFPDKGYSFVR 244 HSP 2 Score: 57.7658 bits (138), Expect = 1.033e-8 Identity = 47/202 (23.27%), Postives = 86/202 (42.57%), Query Frame = 1
Query: 322 VDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDI----LRPTFERFGKI------KNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAA 897
+D P ++VG + D+ EA + F+ G K++ G + + FV F A AA+ +MN + ++ NWA+ +P ++K +T+ +V +LS +I ++ F FGKI K++ K + F+++ A AIQQ+NG + +++ NW + A
Sbjct: 1 MDDDQPKTLYVGNLSRDVTEALILQVFTQIGPCKSCKMIIDTAG-NDPYCFVEFYEHMHAAAALGAMNGRKILGKDMKVNWAS-------MPSSQKK-----------------DTSNHFHVFVGDLSPEISTDDVKAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNGQWLGGRQIRTNWATRKPPA 177
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Cavefish
Match: ENSAMXT00000035946.1 (polyadenylate-binding protein 1-like [Source:NCBI gene;Acc:103030422]) HSP 1 Score: 80.1073 bits (196), Expect = 1.945e-15 Identity = 66/282 (23.40%), Postives = 120/282 (42.55%), Query Frame = 1
Query: 67 IYVSNLPSPISEEDLLSIFGSFGVCISCQL----NLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPE----KNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN 888
I++ NL I + L F +FG +SC++ N ++ F+ +AE+A+ + + +++ V + + A +K+ +++ G D+D+ KLKD F G + +V+ G+ KGF FVSF ++A A+ MN + +++ A K K F Q K Y+ N V + + L ++ LR F FG I + K E K FV + + + A A+ ++NG + + L ++
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEF-----TNVYIKNFGEDMDDEKLKDVFGKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKELNGKQVYVGRAQKKGERQT---ELKRKFEQ-MKQDRMTRYQG--VNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371 HSP 2 Score: 63.5438 bits (153), Expect = 3.402e-10 Identity = 44/174 (25.29%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHK-GFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKN----HAFVNYDTHDAAAYAIQQLNGYKIN 852
++VG + D+ EA L + FS G ++ +V R + G+A+V+F +A A+ +MN + R ++ W+ + P +K G N + + +++ L TF FG I + K ++N + FV+++TH+AA AI+++NG +N
Sbjct: 13 LYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRD------PSLRKSGVG----------------NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLN 164 HSP 3 Score: 61.6178 bits (148), Expect = 1.273e-9 Identity = 47/188 (25.00%), Postives = 86/188 (45.74%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVE-EVQNSAPYFVASKKVDYSTPVQ---IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSK 579
+K +Y+ N + +E L +FG +G +S ++ + S ++ F+ A++A+ MN ++ Q+ V A + E Q K D T Q ++V + +D+ +L+ FS G + AKV+ G+ KGF FV FS+ +EA A+ MN + + + A + +
Sbjct: 186 RAKEFTNVYIKNFGEDMDDEKLKDVFGKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKELNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKE 372
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Sea Lamprey
Match: tia1l (cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]) HSP 1 Score: 120.939 bits (302), Expect = 2.121e-31 Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK 885
+FVG + +I L+ F+ G++ DA+VV+ G+ KG+ FVSF + +A AIQ M R+I+ NWAT+ PP K + K L EE+ ++ TN +VY + + L+E ++R TF FG+I I+ FP+K ++F+ + TH++AA+AI +NG I +KC WGK+
Sbjct: 5 VFVGDLSPEISTDDLRAAFAPFGKISDARVVKDLATGKSKGYGFVSFFQKLDAENAIQQMGGQWLGGRQIRTNWATRK------PPAPKGSQDTDPKHLSFEEVLNQSSPTNCTVYCGGITQGLTEQLMRQTFLLFGQILEIRVFPDKGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKE 183 HSP 2 Score: 55.8398 bits (133), Expect = 5.677e-9 Identity = 45/187 (24.06%), Postives = 90/187 (48.13%), Query Frame = 1
Query: 67 IYVSNLPSPISEEDLLSIFGSFGVCISCQL--NLETSSA----YIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEE-----VQNSAPYFVASKKV-DYSTPV--QIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKN 582
++V +L IS +DL + F FG ++ +L T + ++ F +L AE A+ M + Q+ A + Q++ P ++ ++V + S+P ++ GGI + E ++ F GQ+++ +V PD KG++F+ F+ + A AI S+N + ++C W ++ +
Sbjct: 5 VFVGDLSPEISTDDLRAAFAPFGKISDARVVKDLATGKSKGYGFVSFFQKLDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKGSQDTDPKHLSFEEVLNQSSPTNCTVYCGGITQGLTEQLMRQTFLLFGQILEIRVF--PD---KGYSFIRFATHESAAHAIVSVNGSTIEGFSVKCFWGKEASD 186
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]) HSP 1 Score: 73.9442 bits (180), Expect = 3.144e-14 Identity = 62/276 (22.46%), Postives = 120/276 (43.48%), Query Frame = 1
Query: 67 IYVSNLPSPISEEDLLSIFGSFGVCISCQL----NLETSSAYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEIS-YEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPE----KNHAFVNYDTHDAAAYAIQQLNGYKINSIEL 864
+++ NL I + + F +FG +SC++ N ++ F+ + +A++A+ MN ++ + + + ++ +++ +++ G D+DE KL++ F G+ + V+ G+ +GF FVSF ++A A+ MN + R + A K K Q E IS Y+ N V + +N+ ++ LR F +G I + K E K FV + + + A A+ ++NG + S L
Sbjct: 101 VFIKNLDKSIDNKAMYDTFSAFGNILSCKVVCDENGSRGYGFVHFETQEAADRAIEKMNGMLLNDRLARRRFVGRFKSRKEREQEMGARAKEFTN---VYIKNFGDDMDEDKLREFFGKFGKALSVCVMSDECGKSRGFGFVSFEQHEDAQRAVNEMNGKELNGRTVFVGRAQKKGERQAELKRKFEMLKQ-----ERISRYQG--VNLYVKNLDDNIDDEQLRKEFAPYGTITSTKVMSEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 366 HSP 2 Score: 60.4622 bits (145), Expect = 5.764e-10 Identity = 42/192 (21.88%), Postives = 86/192 (44.79%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCIS-CQLNLETSSA----YIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPY---------FVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSK 579
+K +Y+ N + E+ L FG FG +S C ++ E + ++ F+ A++A+ M+ ++N +V Q + +++ V ++V + +ID+ +L+ F+ G + KV+ +G+ KGF FV FS+ +EA A+ MN + ++ + A + +
Sbjct: 189 RAKEFTNVYIKNFGDDMDEDKLREFFGKFGKALSVCVMSDECGKSRGFGFVSFEQHEDAQRAV----NEMNGKELNGRTVFVGRAQKKGERQAELKRKFEMLKQERISRYQGVNLYVKNLDDNIDDEQLRKEFAPYGTITSTKVM-SEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKE 375 HSP 3 Score: 58.151 bits (139), Expect = 3.452e-9 Identity = 43/174 (24.71%), Postives = 81/174 (46.55%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHK-GFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKN----HAFVNYDTHDAAAYAIQQLNGYKIN 852
++VG + D+ EA L + FS G V+ +V R + G+A+V+F +A A+ +MN + + I+ W+ + P +K G N + + +++ + TF FG I + K ++N + FV+++T +AA AI+++NG +N
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRD------PSLRKSGVG----------------NVFIKNLDKSIDNKAMYDTFSAFGNILSCKVVCDENGSRGYGFVHFETQEAADRAIEKMNGMLLN 164
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Sea Lamprey
Match: sf3b4 (splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]) HSP 1 Score: 65.0846 bits (157), Expect = 1.582e-11 Identity = 52/185 (28.11%), Postives = 91/185 (49.19%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS------AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ-NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDA-KVVRGPD-GQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATK 573
E + T+YV L +SE L +F G ++ + + + ++EF E A+ A+ + MN++ Y + ++ N A +K +D IF+G + +IDE L D FS G ++ K +R P+ G KG+AF++F++ + + AAI++MN NR I ++A K
Sbjct: 8 ERNQDATVYVGGLDDKVSEALLWELFLQAGPVVNTHMPKDRITQQHQGYGFVEFLGEEDADYAIKI---------MNMIKLYGKPIRVNKA--SAHNKNLDVGA--NIFIGNLDTEIDEKLLYDTFSAFGVILQTPKTMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPISVSYAFK 179 HSP 2 Score: 55.8398 bits (133), Expect = 1.277e-8 Identity = 49/194 (25.26%), Postives = 88/194 (45.36%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGP-DGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKI----KNIKAFPE----KNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAG 900
++VGG+ + EA L + F G V++ + + QH+G+ FV F E++A AI+ MN + + I+ N A+ NK + G N + + + E +L TF FG I K ++ PE K +AF+N+ + +A+ AI+ +NG + + + ++ K + G
Sbjct: 15 VYVGGLDDKVSEALLWELFLQAGPVVNTHMPKDRITQQHQGYGFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAH--------NKNLDVG---------------ANIFIGNLDTEIDEKLLYDTFSAFGVILQTPKTMRD-PETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPISVSYAFKKDSKG 184
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Sea Lamprey
Match: rbm34 (RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]) HSP 1 Score: 64.3142 bits (155), Expect = 2.454e-11 Identity = 47/192 (24.48%), Postives = 85/192 (44.27%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEE-------------VQNSAPYFV--ASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPD-GQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATK 573
E K +T++V NLP +++E + F GV S +L D E+S ++A T N N + + EE +Q+ V AS + ++ +F+G + +D++E +++ F CG V +VVR + G KGF ++ F D A+ ++ + RK++ + K
Sbjct: 105 EEKRKRTVFVGNLPMSLAKEAVKKFFRPCGVIESVRLRC-----IARADPEMSLKQAAIQGKTHPQRNNKNAYVVFKEEQGAVQALSRNGEEIQSGFHIRVDAASGEKNHDHKRSVFIGNLPYDVEEDRIRSHFEPCGPVESVRVVRDRESGMGKGFGYILFKGTDAVLLALH-LDGSEMAGRKVRVKRSVK 290
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Sea Lamprey
Match: pabpc4 (poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]) HSP 1 Score: 62.3882 bits (150), Expect = 1.229e-10 Identity = 57/243 (23.46%), Postives = 107/243 (44.03%), Query Frame = 1
Query: 178 YIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFS-HCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHA----FVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN 888
++ F+ + +A+KA+ MN M N V + + + F +K +++ +++ G D+D+ +L++ F + G+ + KV+ G+ KGF FVSF ++A A+ MN + R I A K K Q + Y+ N V + +N++++ L F FG I + K E+ + FV + + + A A+ ++NG I S L ++
Sbjct: 2 FVHFETQEAADKAIEKMNG--MLLNDRKVFVGRFKSRKEREAEF-GAKAREFTN---VYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMS----KYQG--VNLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVTEMNGRIIGSKPLYVALAQRK 232
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]) HSP 1 Score: 75.8702 bits (185), Expect = 5.529e-15 Identity = 71/288 (24.65%), Postives = 121/288 (42.01%), Query Frame = 1
Query: 64 TIYVSNLPSPISEEDLLSIFGSFG------VCISCQLNLETSSAYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKN-------HAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK 885
++YV +L +SE L IF G VC AY+ F++ + KA+ +N TP+ ++ + + IF+ + DID L D FS G ++ +K+ +G+ KGF FV F E A AI ++N + + ++I V P+ ++ + LEE +A TN V + +++ + F +FG I + A EK+ FVNY+ H+ A A++ LN ++N +L +K
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIM------------WSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIY------------VAPH--LSRKERDSQLEET--KAHYTNLYVKNINSETTDEQFQELFAKFGPI--VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQK 296 HSP 2 Score: 67.0106 bits (162), Expect = 2.948e-12 Identity = 52/202 (25.74%), Postives = 96/202 (47.52%), Query Frame = 1
Query: 25 YFNRQKMESKNNKT------IYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIA-------YVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATK 573
+ +R++ +S+ +T +YV N+ S ++E +F FG +S L + ++ ++ A KA+ A+ND+ ++ ++ V A +V + Q A + K Y V +FV + +D+ KL++ F+ G + AKV+R +G+ KGF FV FS +EA AI N + + + A +
Sbjct: 201 HLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEA--YRLEKMAKYQG-VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQR 399
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 65.4698 bits (158), Expect = 6.315e-12 Identity = 50/190 (26.32%), Postives = 89/190 (46.84%), Query Frame = 1
Query: 337 PVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVV--RGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIK--AFPE----KNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNW 876
P IFVG + + ID+ LK F H G VI A+V+ RG D + +G+ +V F N+ A AIQ M R I C+ +T GN ++ FG + E + ++++ ++ N D + F + G++ +++ PE K +V + + A A+ L G I++ ++ ++
Sbjct: 167 PATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTD-RSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNN---DRAKKFGDT----------PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDF 342 HSP 2 Score: 59.6918 bits (143), Expect = 5.431e-10 Identity = 47/187 (25.13%), Postives = 91/187 (48.66%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS------AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQ----IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDG-QHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWAT 570
E++ TI+V L I +E L F G I ++ E + Y++F+N+ AEKA+ M +D +N ++ + N+ +KK TP + +F+G + F+ D + + F+ G+V+ ++ P+ Q KGF +V FSN ++A A+ ++ NR ++ ++++
Sbjct: 163 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNND----RAKKFG-DTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 344
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Yeast
Match: GBP2 (Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; also binds single-stranded telomeric repeat sequence in vitro; relocalizes to the cytosol in response to hypoxia; GBP2 has a paralog, HRB1, that arose from the whole genome duplication [Source:SGD;Acc:S000000517]) HSP 1 Score: 63.929 bits (154), Expect = 2.237e-11 Identity = 67/307 (21.82%), Postives = 127/307 (41.37%), Query Frame = 1
Query: 64 TIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAY------IEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLE---------EISYEA--------PETNTSVYVMAENL----SEDILRPTFERFGKIKNIKAFPEKNH-----AFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN 888
+I+V NL + EDL +FG+ G + + ++ TS + +EF S + A++ D + ++ +V + + + + + + ++F+ + + ++ LKD F CG V+ A V +G +GF V + EDE AI + N R ++ +K N N++ + T+ E I A P + + ++ NL + L F GKI N + P++N A V Y+ A + IQ+LN Y L+ ++ +++
Sbjct: 123 SIFVRNLTFDCTPEDLKELFGTVGEVV--EADIITSKGHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMVRQDNPPPEAAKEFSKKATREEIDNGFEVFIINLPYSMNWQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEVREGRFNKRKNNDRYNQRREDLEDTRGTEPGLAQDAAVHIDETAAKFTEGVNPGGDRNCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCIQKLNNYNYGGCSLQISYARRD 427
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Yeast
Match: PUB1 (Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; human homolog Tia1 is critical for normal synaptic plasticity; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004961]) HSP 1 Score: 56.9954 bits (136), Expect = 3.806e-9 Identity = 32/103 (31.07%), Postives = 50/103 (48.54%), Query Frame = 1
Query: 589 GVPPNKKMAFGQSTKTLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNA 891
G+PP + + ++ I AP T+ Y+ + +E L P F+ FG I + K +PEK F+ YDTH+ AA I L + L+ WGK+ +
Sbjct: 319 GLPPQV------NPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVALANFPFQGRNLRTGWGKERS 415 HSP 2 Score: 54.299 bits (129), Expect = 2.770e-8 Identity = 42/186 (22.58%), Postives = 81/186 (43.55%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERF-----GKIK-NIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK 885
++VG + I E LK F G + + K++ + ++ +AFV + +A A+Q++N N ++ NWA +S+ + S T N V + N+ ++ LR F+ F G + +++ + + FV++ + D A A+ + G +N L+ NW K
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSS------------SDDTF----------NLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 56.6102 bits (135), Expect = 6.185e-9 Identity = 43/174 (24.71%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 49 SKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPD-GQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWA 567
SK + +++ L +E++L FG +G ++ + ++ LS EK ++++ +++ V + + + P K +IFVGGIG D+ + ++ FS G +IDA+++ D GQ +GF FV++ + D Q+ F +RKI+ A
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV---VKTQHILDGKVIDPKRAIPRDEQDKTG------KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN-KFIDFKDRKIEIKRA 318
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Nematostella
Match: EDO32492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUY1]) HSP 1 Score: 91.2781 bits (225), Expect = 5.878e-21 Identity = 64/250 (25.60%), Postives = 118/250 (47.20%), Query Frame = 1
Query: 70 YVSNLPSPISEEDLLSIFGSFGVCISCQL----NLETSSAYIEFDNELSAEKA-LAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGP-DGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDI----LRPTFERFGKIKNIKAFPEKNHAFV 789
YV NL ++E + SIF + C++ + + ++EF+ A++A M+ + ++ V N A K+ D + IFVG + ++D A L+ F G++ + +VV+ P + KGF FVSF ++A AI M++ ++++ NWA + N P + +++ +++ + NT+VYV NL D+ L+ F ++G I K F +K +AF+
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINSVSYKGPYCFVEFETHADAQEAKFRMDQRTVMDKKLKV---------NWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNN-----PTQSKYVCVKNLLWDDVFHQSSQLNTTVYV--GNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFI 234
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Nematostella
Match: EDO33206 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSV8]) HSP 1 Score: 82.0333 bits (201), Expect = 1.437e-16 Identity = 71/310 (22.90%), Postives = 137/310 (44.19%), Query Frame = 1
Query: 67 IYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDI----LRPTFERFGKIKNIKAFPE-----KNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWG-----KKNAAAGGNMNKPMGNQMNQ 939
I++ NL I + L F +FG +SC++ + ++ F+ E +A +A+A D + +++ V ++ + + KK ++V G D+D+ ++K+ + G+++ KV+ P+G+ KGF FVSF +EA A+ +N R++ WA ++K + + +E+ E V + +NL + I LR F +G I + K + K FV + + + A A+ ++NG + S L +K A +M++ G +M+Q
Sbjct: 103 IFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKF-----TNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRL---WAGRAK-------KRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREERKAQLAAQHMHRISGLRMHQ 397 HSP 2 Score: 53.1434 bits (126), Expect = 1.850e-7 Identity = 44/175 (25.14%), Postives = 75/175 (42.86%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHK-GFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPE-----KNHAFVNYDTHDAAAYAIQQLNGYKIN 852
++VG + D+ EA L + FS G V+ +V R + G+A+V+F A A+ +MN R + W + P +K G N + + +++ L TF FG I + K + K + FV+++T DAA AI +++G +N
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTMNFDPIKGRPCRIMWQQRD------PSLRKSGVG----------------NIFIKNLDKSIDNKSLYDTFSAFGNILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLN 167
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Nematostella
Match: EDO34879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN30]) HSP 1 Score: 70.0922 bits (170), Expect = 3.517e-13 Identity = 71/318 (22.33%), Postives = 128/318 (40.25%), Query Frame = 1
Query: 67 IYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS------AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAY--VEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMF--HNRKIQCNW---------------ATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTS----------------------------------VYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNG 840
+ ++ +P +S+ED+ IFG+ G SC+L + ++ A++ +DN A KA+ MN + + + V A E++N+ +++ G+ D+ E +++ F G++I +KV++ G+ +G FV F EA AI +NN N K+ + A S G + P + + G + + Y +P T +S VY + + + L F +G I NI+ +K + FVN ++ A +AI LNG
Sbjct: 12 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIKNA----------------NLYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLTVKFANPPNSRQPAMPLSPALTSPLGRALTPQRNFSGGPVHHQMLNMRY-SPMTASSFSPACQANCHSPNNSSSNSYTNLSGLTPQGWCIFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACHAICCLNG 312
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Nematostella
Match: EDO37342 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFY3]) HSP 1 Score: 70.4774 bits (171), Expect = 1.055e-12 Identity = 49/174 (28.16%), Postives = 88/174 (50.57%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQL--NLETSS---AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKI 552
ES + + +++SNL I+E+ L F G + ++ N+ S AY+EF+NE + + ALAM+ M+ M + V++ +N F +D T +FV + FD E+++++ FS G V ++V G+ KG+ +V + E A A+ +++ T R I
Sbjct: 596 ESSDPRKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNMAGRSKGYAYVEFNNESTVQAALAMDREKMEGRPM-FISPCVDKAKNPTT-FKFPTSLDKHT---LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLDKTEVKGRTI 764 HSP 2 Score: 59.3066 bits (142), Expect = 2.957e-9 Identity = 51/208 (24.52%), Postives = 98/208 (47.12%), Query Frame = 1
Query: 274 VEEVQNSAPYFVASKK------VDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKI---QCNWATKSKNGNGVPPNKKM--AFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNI-----KAFPEKNHAFVNYDTHDAAAYAIQQLNGYKI 849
+++V++S P A+KK + S P ++F+ + F I E L+D FS G+V+D ++V+ G+ KG+A+V F+NE AA+ +M+ R + C K+KN P K + + T + + ++A E+ + F + G +K + +A K + +V Y+ +A+ A+ L+ ++
Sbjct: 576 IDKVRSSEP---AAKKPCGESEEESSDPRKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNMAGRSKGYAYVEFNNESTVQAAL-AMDREKMEGRPMFISPC--VDKAKN----PTTFKFPTSLDKHTLFVSNLPFDAKESE--------------IEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLDKTEV 759
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Nematostella
Match: EDO42417 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1S3]) HSP 1 Score: 68.5514 bits (166), Expect = 1.549e-12 Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = 1
Query: 46 ESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQL------NLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQ-NSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDA-KVVRGPD-GQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKN 582
E + TIYV L +SE + +F G ++ + L ++EF E A+ A+ + MN++ Y + ++ N A +K +D +F+G + ++DE L D FS G ++ K++R D G KGFAF++F++ D + AAI++MN NR I ++A K ++
Sbjct: 8 ERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKV---------MNMIKVYGKPIRVNKAS--AHNKNLDVGA--NLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKES 182 HSP 2 Score: 54.6842 bits (130), Expect = 5.012e-8 Identity = 47/193 (24.35%), Postives = 84/193 (43.52%), Query Frame = 1
Query: 346 IFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQ-HKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKI-------KNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAG 900
I+VGG+ + EA + + F G V++ + + Q H+G+ FV F E++A AI+ MN + + I+ N A+ NK + G N + + + E +L TF FG I ++ K AF+N+ + DA+ AI+ +NG + + + ++ K + G
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASAH--------NKNLDVG---------------ANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKESKG 184
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Medaka
Match: ENSORLT00000003147.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101155125]) HSP 1 Score: 162.54 bits (410), Expect = 1.856e-44 Identity = 110/354 (31.07%), Postives = 177/354 (50.00%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALA-MNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKS---KNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKK--NAAAGGNMNKPMG------------NQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQF 1029
M+ + KT+YV NL ++E +L +FG G C SC++ ++T+ ++EF A +A MN + ++ V A + P S+K D S+ +FVG + +I +K F+ G++ D +VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ K N +K+++F +E+ ++ +N +VY + L+E I+R TF FG+I I+ FPEK ++FV +++H+AAA+AI +NG I +KC WGK+ + G PM NQ Q+Y N+Q PN +QVP +
Sbjct: 1 MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWA-------TTP---TSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSF-------DEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVQGPIQQVPMAQQSTLGFAAQPYNQWGQWYGNTQ---------QIGQYVPNGWQVPSY 328
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Medaka
Match: ENSORLT00000019582.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101158614]) HSP 1 Score: 160.614 bits (405), Expect = 1.015e-43 Identity = 95/292 (32.53%), Postives = 160/292 (54.79%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKN 888
ME +T+YV NL ++E +L +F G C SC++ ++T+ ++EF D+ +A AMN + ++ V A + P S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + ++K L EE+ ++ +N +VY ++ L+E ++R TF FG+I ++ FP+K ++FV +++H++AA+AI +NG I+ +KC WGK+
Sbjct: 1 MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWA-------TTP---TSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRK------PPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKET 276
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Medaka
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:101155294]) HSP 1 Score: 149.828 bits (377), Expect = 8.099e-40 Identity = 99/309 (32.04%), Postives = 153/309 (49.51%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNK---PMGNQMNQYYDN 951
+T+YV NL ++E +L +F G C SC++ E +S ++EF D MN +EV+ + +S+K D S +FVG + DI ++ F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +K L EE+ ++ N +VY + LSE ++R TF FG+I I+ FPEK ++F+ + +HD+AA+AI +NG I +KC WGK++ N + Q NQ Y N
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEF---------FEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRK------PPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKNPQQFEYSQWGQWNQVYGN 301
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Medaka
Match: tial1 (TIA1 cytotoxic granule associated RNA binding protein like 1 [Source:NCBI gene;Acc:101155294]) HSP 1 Score: 144.05 bits (362), Expect = 1.180e-37 Identity = 98/315 (31.11%), Postives = 154/315 (48.89%), Query Frame = 1
Query: 61 KTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLET--------SSAYIEF--DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGN---MNKPMGNQMNQYYDN 951
+T+YV NL ++E +L +F G C SC++ E SS +++ ++ + D MN +EV+ + +S+K D S +FVG + DI ++ F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AI M R+I+ NWAT+ PP K +K L EE+ ++ N +VY + LSE ++R TF FG+I I+ FPEK ++F+ + +HD+AA+AI +NG I +KC WGK++ N Q NQ Y N
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEVPIFVNRWGSSFFLQHTSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRK------PPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKNPQQFEYSQWGQWNQVYGN 316
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Medaka
Match: ENSORLT00000019586.2 (nucleolysin TIA-1 [Source:NCBI gene;Acc:101158614]) HSP 1 Score: 132.109 bits (331), Expect = 2.055e-34 Identity = 86/276 (31.16%), Postives = 144/276 (52.17%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS----AYIEF-DNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRG-PDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTL--EEISYEAPETNTSVYV--MAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNG 840
ME +T+YV NL ++E +L +F G C SC++ ++T+ ++EF D+ +A AMN + ++ V A + P S+K D S +FVG + +I +K F+ G++ DA+VV+ G+ KG+ FVSF N+ +A AIQ M R+I+ NWAT+ PP K + ++K L EE+ ++ +N +VY ++ L+E ++R TF FG+I ++ FP+K ++FV+ ++ Q LNG
Sbjct: 1 MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWA-------TTP---TSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRK------PPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVSAISNGGVMEPTQGLNG 260 HSP 2 Score: 54.299 bits (129), Expect = 1.007e-7 Identity = 42/197 (21.32%), Postives = 81/197 (41.12%), Query Frame = 1
Query: 337 PVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDI----LRPTFERFGKIKNIKAFPE------KNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAA 897
P ++VG + D+ E + F+ G K++ G + FV F + A A++ +MN ++++ NWAT P ++K +T+ +V +LS +I ++ F FG+I + + + K + FV++ A AIQ + G + +++ NW + A
Sbjct: 6 PRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDP-YCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWAT-------TPTSQK-----------------KDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPA 177
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Planmine SMEST
Match: SMESG000044649.1 (SMESG000044649.1) HSP 1 Score: 823.543 bits (2126), Expect = 0.000e+0 Identity = 429/430 (99.77%), Postives = 429/430 (99.77%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNXXXXXXXXXXPNFFQVPQFYNNSQMGSYYNSAPNXXXXXXXXXXXXXNSNANFSNPQGNFIAQPNLLGQPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQFNTYQ 1332
MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEA AAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNYQQQYDQYCQPNFFQVPQFYNNSQMGSYYNSAPNYPQYPMPYFQQQPNSNANFSNPQGNFIAQPNLLGQPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQFNTYQ
Sbjct: 1 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEASAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPMGNQMNQYYDNSQANFDNYQQQYDQYCQPNFFQVPQFYNNSQMGSYYNSAPNYPQYPMPYFQQQPNSNANFSNPQGNFIAQPNLLGQPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQFNTYQ 430
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Planmine SMEST
Match: SMESG000044671.1 (SMESG000044671.1) HSP 1 Score: 308.145 bits (788), Expect = 3.340e-99 Identity = 184/453 (40.62%), Postives = 257/453 (56.73%), Query Frame = 1
Query: 40 KMESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQN-SAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWG------------------KKNAAAGGNMNKPMGNQMNQYYDNSQA--NFDNXXXXXXXXXXPNF---FQVPQFYNNSQMGSYYNSAPNXXXXXXXXXXXXXNSNANFSNPQGNFIAQPNLLG--QPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQF 1320
KMESKN KTIY+S+LP ++EEDLLSIF ++G+C+SC L+ ET +AY+EFDNE SA +L+MN M + ++ + IAY+E+ N + + + P QIFVG IG +DE LK GF H G +I+AKV+R DG+HKG+ FV+FSNE EA +AI MN T FH+ KI+C+W K+K+ V +A ++KTLEEI E P++ T+V+V +N+++++L P FE FGKIKNIKAFP N AF+NY +H++A AI Q+NG+ +N+IEL C+W K A G K + NQ+NQY Q ++D Q+ QP+F + FYN M +Y + N P N P+ QP G QPK YG P I +Q KPR+NR P+ KP + N ++
Sbjct: 3 KMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQETSEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWG-KNKSNLAV-----VASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSIKKLILPPPPMRKMRIANVGATRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDY-NSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPK-PYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKY 447
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Planmine SMEST
Match: SMESG000044671.1 (SMESG000044671.1) HSP 1 Score: 307.76 bits (787), Expect = 6.726e-99 Identity = 184/453 (40.62%), Postives = 257/453 (56.73%), Query Frame = 1
Query: 40 KMESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDNELSAEKALAMNDTPMDSNQMNVVIAYVEEVQN-SAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWG------------------KKNAAAGGNMNKPMGNQMNQYYDNSQ--ANFDNXXXXXXXXXXPNF---FQVPQFYNNSQMGSYYNSAPNXXXXXXXXXXXXXNSNANFSNPQGNFIAQPNLLG--QPKVSYGGQLKSNLKAIPKAPISSQTKPRMNRAPHPYNKPKVNNANQF 1320
KMESKN KTIY+S+LP ++EEDLLSIF ++G+C+SC L+ ET +AY+EFDNE SA +L+MN M + ++ + IAY+E+ N + + + P QIFVG IG +DE LK GF H G +I+AKV+R DG+HKG+ FV+FSNE EA +AI MN T FH+ KI+C+W K+K+ V +A ++KTLEEI E P++ T+V+V +N+++++L P FE FGKIKNIKAFP N AF+NY +H++A AI Q+NG+ +N+IEL C+W K A G K + NQ+NQY Q ++D Q+ QP+F + FYN M +Y + N P N P+ QP G QPK YG P I +Q KPR+NR P+ KP + N ++
Sbjct: 11 KMESKNKKTIYISSLPKSVTEEDLLSIFENYGLCVSCSLDPETCTAYVEFDNENSANNSLSMNGVEMGTTKIEISIAYIEQEHNIKRESSLKQETSEDCKPAQIFVGNIGTKVDETILKGGFEHLGTIIEAKVIRDADGKHKGYGFVTFSNEYEARSAIDKMNETFFHDEKIKCSWG-KNKSNLAV-----VASKNASKTLEEIFNETPKSYTNVFVTGDNVTKELLEPHFEVFGKIKNIKAFPRNNQAFINYFSHESAGNAIHQMNGFVVNNIELNCSWAIKTEKSIKKLILPPPPMRKMRIANVGATRKYLANQINQYNGRQQPYESYDETGYGLPQFQQPSFTDDYTDQSFYNPVAMPTYQDDY-NSYNVYPPSVPAPLIRNPPLGQPKPYLNVQPKPFGPAQPK-PYGNVQSKPFNVQPLMGIPAQPKPRLNRVAQPFKKPILGNPGKY 455
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Planmine SMEST
Match: SMESG000055074.1 (SMESG000055074.1) HSP 1 Score: 279.256 bits (713), Expect = 1.071e-89 Identity = 150/299 (50.17%), Postives = 198/299 (66.22%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPM 921
M KNN+TIYV NLP ++++ L+ IFG+FG CISC + + S A+IE+ + SA AL AM+ M +NQ+ V + P V S K+DYS VQIFVG IG D+DE LK+GFS GQ+IDAKVVR PDGQ +GFAFVSFSN DEA AIQSM+ T FHNR I+CNWAT+ NG+ + + + + + E + EAP TNT+VYV ENL+E++L F+ FG+I ++K +PEK HAF+N+ TH+AAA AI Q +GYKIN +KCNWGK+N A + P+
Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVNWSSGPSTI-PGPAAVTSAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATR----NGLDGEQFIKY--TPRPYELVYKEAPLTNTNVYVAGENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFAISTSTMPPL 292
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Planmine SMEST
Match: SMESG000055075.1 (SMESG000055075.1) HSP 1 Score: 278.87 bits (712), Expect = 1.299e-89 Identity = 150/299 (50.17%), Postives = 198/299 (66.22%), Query Frame = 1
Query: 43 MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSS-----AYIEFDNELSAEKAL-AMNDTPMDSNQMNVVIAYVEEVQNSAPYFVASKKVDYSTPVQIFVGGIGFDIDEAKLKDGFSHCGQVIDAKVVRGPDGQHKGFAFVSFSNEDEAGAAIQSMNNTMFHNRKIQCNWATKSKNGNGVPPNKKMAFGQSTKTLEEISYEAPETNTSVYVMAENLSEDILRPTFERFGKIKNIKAFPEKNHAFVNYDTHDAAAYAIQQLNGYKINSIELKCNWGKKNAAAGGNMNKPM 921
M KNN+TIYV NLP ++++ L+ IFG+FG CISC + + S A+IE+ + SA AL AM+ M +NQ+ V + P V S K+DYS VQIFVG IG D+DE LK+GFS GQ+IDAKVVR PDGQ +GFAFVSFSN DEA AIQSM+ T FHNR I+CNWAT+ NG+ + + + + + E + EAP TNT+VYV ENL+E++L F+ FG+I ++K +PEK HAF+N+ TH+AAA AI Q +GYKIN +KCNWGK+N A + P+
Sbjct: 1 MSFKNNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHPSASLALSAMDGIYMWNNQIKVNWSSGPSTI-PGPAAVTSAKIDYSNSVQIFVGDIGLDVDEPMLKEGFSQFGQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATR----NGLDGEQFIKY--TPRPYELVYKEAPLTNTNVYVAGENLTEELLNCHFQEFGRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFAISTSAMPPL 292 The following BLAST results are available for this feature:
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Nuclear and cytoplasmic polyadenylated RNA-binding protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008437 ID=SMED30008437|Name=Nuclear and cytoplasmic polyadenylated RNA-binding protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1639bpback to top protein sequence of SMED30008437-orf-1 >SMED30008437-orf-1 ID=SMED30008437-orf-1|Name=SMED30008437-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=431bp MESKNNKTIYVSNLPSPISEEDLLSIFGSFGVCISCQLNLETSSAYIEFDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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