Homeobox protein Nkx-3.2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30008363 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Human
Match: NKX3-2 (NK3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:951]) HSP 1 Score: 112.849 bits (281), Expect = 1.265e-28 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEI 550 +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P ++ Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLLASAPAAKKV 280
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Human
Match: NKX3-1 (NK3 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7838]) HSP 1 Score: 104.375 bits (259), Expect = 4.394e-27 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 2 Query: 305 SERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEI 520 + + +KRSRAAFSH QV ELER+FSHQ YLS PER LA++LKLTE QVKIWFQNRRYKTK R+Q+ SE+ Sbjct: 44 TPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTK--RKQLSSEL 113
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Human
Match: NKX3-1 (NK3 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7838]) HSP 1 Score: 105.145 bits (261), Expect = 1.504e-26 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 2 Query: 305 SERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEI 520 + + +KRSRAAFSH QV ELER+FSHQ YLS PER LA++LKLTE QVKIWFQNRRYKTK R+Q+ SE+ Sbjct: 119 TPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTK--RKQLSSEL 188
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Human
Match: NKX2-3 (NK2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:7836]) HSP 1 Score: 90.8929 bits (224), Expect = 9.974e-21 Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 296 ANISERMK---KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDT 526 A SER K +++ R FS QV+ELERRF Q YLS PER LA SLKLT QVKIWFQNRRYK K++RQ E+ Sbjct: 137 AEESERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGA 216
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Human
Match: NKX2-3 (NK2 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:7836]) HSP 1 Score: 91.6633 bits (226), Expect = 1.095e-20 Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 287 IQPANISERMK---KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDT 526 + A SER K +++ R FS QV+ELERRF Q YLS PER LA SLKLT QVKIWFQNRRYK K++RQ E+ Sbjct: 134 CKAAEESERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGA 216
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Celegans
Match: ceh-9 (Homeobox protein ceh-9 [Source:UniProtKB/Swiss-Prot;Acc:P56407]) HSP 1 Score: 83.1889 bits (204), Expect = 1.417e-19 Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 2 Query: 98 FYFVVDKFKMMRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPN 556 F + K R+++ LI+++L T ++ +++ + S L+ +K S P ++ K+K++R FS QV+ELE++F + YLS +R+ELA+ L +TE QVKIWFQNRR K KK IESE ++ EIP+ Sbjct: 14 FALLTSDVKPQRRTSHLIKDILDLPT---------VNGEIDEFGRCKSSLDQAKES---------PIEKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKK----IESE----KERSGEIPD 140
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Celegans
Match: cog-1 (COG-1B [Source:UniProtKB/TrEMBL;Acc:G5EGF2]) HSP 1 Score: 83.9593 bits (206), Expect = 6.315e-19 Identity = 45/120 (37.50%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 143 FLIENLLSETTYENDDISENIDSDVESY--FSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 FL+++ L+ + N EN+ + S+ +N S S M H +Q + S M+KK+SR F+ +Q+Y+LER+F YL+G +R +LA+ L ++E+QVK+WFQNRR K +K+ Sbjct: 108 FLLQSQLNSQSMMNRVTQENVSRALTSFNLLNNLPGALPSLSPMGRLQHSMQLSPNSLNMQKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKK 227
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Celegans
Match: ceh-22 (Homeobox protein ceh-22 [Source:UniProtKB/Swiss-Prot;Acc:P41936]) HSP 1 Score: 80.8777 bits (198), Expect = 5.315e-18 Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 341 FSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR--QQIESEIDTKNPQNFE----IPNFPSRDLSI 580 F+ Q YELERRF Q YLS PER LA ++LT QVKIWFQN RYKTKK + I + + T P F +FP+R + I Sbjct: 65 FTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQNHRYKTKKSHTDKPINAALLTTMPNAFSSQSTAASFPTRAMPI 150
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Celegans
Match: ceh-22 (Homeobox protein ceh-22 [Source:UniProtKB/Swiss-Prot;Acc:P41936]) HSP 1 Score: 81.6481 bits (200), Expect = 5.692e-18 Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 341 FSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR--QQIESEIDTKNPQNFE----IPNFPSRDLSI 580 F+ Q YELERRF Q YLS PER LA ++LT QVKIWFQN RYKTKK + I + + T P F +FP+R + I Sbjct: 110 FTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQNHRYKTKKSHTDKPINAALLTTMPNAFSSQSTAASFPTRAMPI 195
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Celegans
Match: ceh-22 (Homeobox protein ceh-22 [Source:UniProtKB/Swiss-Prot;Acc:P41936]) HSP 1 Score: 81.2629 bits (199), Expect = 9.161e-18 Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 341 FSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR--QQIESEIDTKNPQNFE----IPNFPSRDLSI 580 F+ Q YELERRF Q YLS PER LA ++LT QVKIWFQN RYKTKK + I + + T P F +FP+R + I Sbjct: 133 FTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQNHRYKTKKSHTDKPINAALLTTMPNAFSSQSTAASFPTRAMPI 218
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Fly
Match: bap (gene:FBgn0004862 transcript:FBtr0084087) HSP 1 Score: 112.464 bits (280), Expect = 1.908e-28 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 212 DVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR-QQIESEI 520 D+ SNDSD + + S +KKRSRAAFSH QV+ELERRF+ Q YLSGPER+E+A+SL+LTE QVKIWFQNRRYKTK+++ QQ E+ + Sbjct: 139 DMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAAL 242
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Fly
Match: scro (gene:FBgn0028993 transcript:FBtr0339923) HSP 1 Score: 80.1073 bits (196), Expect = 4.519e-17 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQN 541 ++++ R F+ QVYELERRF Q YLS PER LA + LT QVKIWFQN RYK K RQ E + +N N Sbjct: 91 QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCK--RQAKEKAMAEQNQHN 163
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Fly
Match: vnd (gene:FBgn0261930 transcript:FBtr0070110) HSP 1 Score: 81.2629 bits (199), Expect = 5.706e-17 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 2 Query: 296 ANISERM--KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKK 493 AN S+ + KK++ R F+ Q YELERRF Q YLS PER LA ++LT QVKIWFQN RYKTK+ Sbjct: 535 ANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR 602
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Fly
Match: vnd (gene:FBgn0261930 transcript:FBtr0110929) HSP 1 Score: 81.2629 bits (199), Expect = 5.787e-17 Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 2 Query: 296 ANISERM--KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQ 505 AN S+ + KK++ R F+ Q YELERRF Q YLS PER LA ++LT QVKIWFQN RYKTK+ + + Sbjct: 389 ANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNE 460
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Fly
Match: scro (gene:FBgn0028993 transcript:FBtr0113751) HSP 1 Score: 80.1073 bits (196), Expect = 1.139e-16 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQN 541 ++++ R F+ QVYELERRF Q YLS PER LA + LT QVKIWFQN RYK K RQ E + +N N Sbjct: 252 QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCK--RQAKEKAMAEQNQHN 324
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Zebrafish
Match: nkx3-2 (NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]) HSP 1 Score: 112.079 bits (279), Expect = 3.255e-29 Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 2 Query: 311 RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR 499 + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R+ Sbjct: 117 KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRRQ 179
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Zebrafish
Match: nkx3.3 (NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]) HSP 1 Score: 104.76 bits (260), Expect = 1.501e-27 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 KKRSRAAFSH QVYELERRF+ Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R Sbjct: 20 KKRSRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRR 78
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Zebrafish
Match: nkx3.3 (NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]) HSP 1 Score: 104.76 bits (260), Expect = 1.501e-27 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 KKRSRAAFSH QVYELERRF+ Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R Sbjct: 20 KKRSRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRR 78
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Zebrafish
Match: nkx3.3 (NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]) HSP 1 Score: 105.531 bits (262), Expect = 7.425e-27 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 137 STFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR 499 S L+ LS + ++ S D+ +E ++ D + +S D + + KKRSRAAFSH QVYELERRF+ Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R+ Sbjct: 58 SCVLVLESLSSDQHSCEEESTGEDNSLERRHDHEMDQQKPQSCSFEDSNP--------KSSKKRSRAAFSHAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRRQ 170
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Zebrafish
Match: nkx3-1 (NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]) HSP 1 Score: 104.76 bits (260), Expect = 8.882e-27 Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 2 Query: 137 STFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERM-KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEID 523 ++F IE++LS + D+ S N +SD + S D + + + + + ++ KKKRSRAAF+H QV ELE++FS Q YLS PERT LA +L LTE QVKIWFQNRRYKTK+R+ E D Sbjct: 38 TSFFIEDILSLKEDKKDEDSCNAESDRDD--STDRQTDSADTCRTSEGKTVSSTEMTGGGGKKKRSRAAFTHLQVLELEKKFSRQRYLSAPERTHLASALHLTETQVKIWFQNRRYKTKRRQLTTEHSKD 165
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Xenopus
Match: ENSXETT00000030786.1 (NK3 homeobox 2 [Source:NCBI gene;Acc:100497965]) HSP 1 Score: 111.694 bits (278), Expect = 2.853e-28 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 311 RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Sbjct: 199 KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR 260
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Xenopus
Match: ENSXETT00000032017.1 (NK3 homeobox 3 [Source:NCBI gene;Acc:100485176]) HSP 1 Score: 108.612 bits (270), Expect = 5.451e-28 Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 305 SERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 S + KKRSRAAFSH QVYELERRFS Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK++ Sbjct: 95 SPKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAAALKLTETQVKIWFQNRRYKTKRK 158
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Xenopus
Match: ENSXETT00000017291.1 (NK3 homeobox 3 [Source:NCBI gene;Acc:100485176]) HSP 1 Score: 108.612 bits (270), Expect = 8.074e-28 Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 305 SERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 S + KKRSRAAFSH QVYELERRFS Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK++ Sbjct: 112 SPKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAAALKLTETQVKIWFQNRRYKTKRK 175
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Xenopus
Match: ENSXETT00000050503.1 (NK3 homeobox 1 [Source:NCBI gene;Acc:100038192]) HSP 1 Score: 105.916 bits (263), Expect = 4.390e-27 Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 287 IQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEID 523 I P ++++KRSRAAFSH+QV ELER+FS Q YLS PER +LA+SLKLTE QVKIWFQNRRYKTK R+Q+ ++++ Sbjct: 89 ISPVEKKLKLQQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQNRRYKTK--RKQLATDME 165
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Xenopus
Match: NKX2-3 (NK2 homeobox 3 [Source:NCBI gene;Acc:100486189]) HSP 1 Score: 91.2781 bits (225), Expect = 9.143e-21 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 284 KIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDT 526 K++ + ++ +++ R FS QV+ELERRF Q YLS PER LA SLKLT QVKIWFQNRRYK K++RQ E+ T Sbjct: 134 KLEDPDRPKQRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLANSLKLTSTQVKIWFQNRRYKCKRQRQDKSLEMGT 214
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Mouse
Match: Nkx3-2 (NK3 homeobox 2 [Source:MGI Symbol;Acc:MGI:108015]) HSP 1 Score: 113.62 bits (283), Expect = 5.747e-29 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEI 550 +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P ++ Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLLASAPAAKKV 280
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Mouse
Match: Nkx3-1 (NK3 homeobox 1 [Source:MGI Symbol;Acc:MGI:97352]) HSP 1 Score: 103.219 bits (256), Expect = 5.343e-26 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2 Query: 311 RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR 499 + +KRSRAAFSH QV ELER+FSHQ YLS PER LA++LKLTE QVKIWFQNRRYKTK+++ Sbjct: 122 KQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ 184
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Mouse
Match: Nkx2-3 (NK2 homeobox 3 [Source:MGI Symbol;Acc:MGI:97348]) HSP 1 Score: 91.6633 bits (226), Expect = 7.592e-21 Identity = 53/114 (46.49%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSFNTNGSVNGFGSHCY-YNS 658 +++ R FS QV+ELERRF Q YLS PER LA SLKLT QVKIWFQNRRYK K++RQ E+ T P + S T GS G G+ Y YNS Sbjct: 145 RRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGTHAPPPPPRRVAVPVLVRDGKPCVTPSAQTYGSPYGVGAGAYSYNS 258
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Mouse
Match: Nkx2-9 (NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]) HSP 1 Score: 87.8113 bits (216), Expect = 3.836e-20 Identity = 49/102 (48.04%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 203 IDSDVESYFSND-SDLEVSK--SSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR 499 ++S+ Y S+D S LE S SS + + P + E+ +K+R FS Q ELERRF Q YLS PER +LAR L+LT QVKIWFQN RYK K+ R Sbjct: 41 LESECSHYLSSDESGLETSPADSSQLASLRRESPGSDPEKRRKRR--VLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLKRGR 140
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Mouse
Match: Nkx2-5 (NK2 homeobox 5 [Source:MGI Symbol;Acc:MGI:97350]) HSP 1 Score: 88.9669 bits (219), Expect = 4.422e-20 Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 341 FSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQ 502 FS QVYELERRF Q YLS PER +LA LKLT QVKIWFQNRRYK K++RQ Sbjct: 144 FSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQ 197
BLAST of Homeobox protein Nkx-3.2 vs. UniProt/SwissProt
Match: sp|P97503|NKX32_MOUSE (Homeobox protein Nkx-3.2 OS=Mus musculus OX=10090 GN=Nkx3-2 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 4.020e-28 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEI 550 +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P ++ Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLLASAPAAKKV 280
BLAST of Homeobox protein Nkx-3.2 vs. UniProt/SwissProt
Match: sp|P78367|NKX32_HUMAN (Homeobox protein Nkx-3.2 OS=Homo sapiens OX=9606 GN=NKX3-2 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 6.074e-28 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEI 550 +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P ++ Sbjct: 205 RKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLLASAPAAKKV 280
BLAST of Homeobox protein Nkx-3.2 vs. UniProt/SwissProt
Match: sp|P22809|BAGP_DROME (Homeobox protein bagpipe OS=Drosophila melanogaster OX=7227 GN=bap PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.912e-27 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 212 DVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR-QQIESEI 520 D+ SNDSD + + S +KKRSRAAFSH QV+ELERRF+ Q YLSGPER+E+A+SL+LTE QVKIWFQNRRYKTK+++ QQ E+ + Sbjct: 139 DMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAAL 242
BLAST of Homeobox protein Nkx-3.2 vs. UniProt/SwissProt
Match: sp|P70061|NKX32_XENLA (Homeobox protein Nkx-3.2 OS=Xenopus laevis OX=8355 GN=nkx3-2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.531e-27 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 311 RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Sbjct: 199 KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR 260
BLAST of Homeobox protein Nkx-3.2 vs. UniProt/SwissProt
Match: sp|O93590|ZAX_XENLA (Homeobox protein zampogna OS=Xenopus laevis OX=8355 GN=zax PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.740e-27 Identity = 58/99 (58.59%), Postives = 66/99 (66.67%), Query Frame = 2 Query: 200 NIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 + DS E F + D E + + D S + KKRSRAAFSH QVYELERRFS Q YLSGPER +LA SLKLTE QVKIWFQNRRYKTK++ Sbjct: 61 DTDSGTED-FHWERDTETANNGAFTDPSSGDRLADSPKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRK 158
BLAST of Homeobox protein Nkx-3.2 vs. TrEMBL
Match: A0A3B3BB18 (NK3 homeobox 3 OS=Oryzias melastigma OX=30732 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 6.956e-29 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 2 Query: 197 ENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQ-------PANISERMK--KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNP 535 E ++++V+ FS + D ++ + V+ ++Q P + +R KKR+RAAFSH QV+ELERRFS Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R Q+ +E+ NP Sbjct: 63 EPLETEVKQEFSAERDEQLQSQARAVEEERLQRREACCCPRDDRQRRPGTKKRARAAFSHTQVHELERRFSAQRYLSGPERADLAEALKLTETQVKIWFQNRRYKTKRR--QVAAEVAALNP 182
BLAST of Homeobox protein Nkx-3.2 vs. TrEMBL
Match: A0A182P3Z1 (Protein bagpipe OS=Anopheles epiroticus OX=199890 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.171e-28 Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 2 Query: 212 DVESYFSNDSDLEVSKS-SMIVDHHKIQPANISERM---KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR-QQIESEI 520 D+ NDSD + S S + HH QP SE M +KKRSRAAFSH QV+ELERRF+ Q YLSGPER+ELA++L+LTE QVKIWFQNRRYKTK+++ QQ E+ + Sbjct: 206 DMRRMAENDSDCDSSSPYSGTLGHHGGQPTLASEEMPSARKKRSRAAFSHAQVFELERRFAQQRYLSGPERSELAKNLRLTETQVKIWFQNRRYKTKRKQIQQHEAAL 313
BLAST of Homeobox protein Nkx-3.2 vs. TrEMBL
Match: H2LU88 (NK3 homeobox 3 OS=Oryzias latipes OX=8090 PE=4 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.769e-28 Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNH 601 KKRSRAAFSH QV+ELERRFS Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R Q+ +E+ NP+ + + ++DE H Sbjct: 10 KKRSRAAFSHTQVHELERRFSAQRYLSGPERADLAEALKLTETQVKIWFQNRRYKTKRR--QVAAEVAALNPKTVSV------KVLVRDEEKQH 95
BLAST of Homeobox protein Nkx-3.2 vs. TrEMBL
Match: A0A4Z2C4W1 (Homeobox domain-containing protein OS=Takifugu bimaculatus OX=433685 GN=fugu_013540 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.582e-28 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 2 Query: 146 LIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNP 535 + E L ET +E+ +EN SD E SN +D SS + D QP + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P Sbjct: 96 VPEESLQETDHESA-TAENAKSDSEP--SNTTD-----SSTVEDKSPDQP-----KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLMASTP 210
BLAST of Homeobox protein Nkx-3.2 vs. TrEMBL
Match: A0A5C6MJI3 (Homeobox protein OS=Takifugu flavidus OX=433684 GN=D4764_09G0003450 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.582e-28 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 2 Query: 146 LIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNP 535 + E L ET +E+ +EN SD E SN +D SS + D QP + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P Sbjct: 96 VPEESLQETDHESA-TAENAKSDSEP--SNTTD-----SSTVEDKSPDQP-----KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLMASTP 210
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Cavefish
Match: nkx3-2 (homeobox protein Nkx-3.2 [Source:NCBI gene;Acc:103036631]) HSP 1 Score: 114.005 bits (284), Expect = 1.117e-29 Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 239 SDLEVSKSSMIVDHHKIQPANISE--------RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 SD E+S S + D ++ E + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Sbjct: 116 SDCELSNS--VCDSSTVEEPGCCEDRTTSDPPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR 207
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Cavefish
Match: nkx3-2 (homeobox protein Nkx-3.2 [Source:NCBI gene;Acc:103036631]) HSP 1 Score: 110.923 bits (276), Expect = 5.207e-29 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 311 RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Sbjct: 112 KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR 173
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Cavefish
Match: nkx3.3 (homeobox protein Nkx-3.2-like [Source:NCBI gene;Acc:103035307]) HSP 1 Score: 104.76 bits (260), Expect = 1.693e-26 Identity = 51/67 (76.12%), Postives = 56/67 (83.58%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEI 520 KKRSRAAFSH QV ELERRF Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R QI +E+ Sbjct: 123 KKRSRAAFSHAQVCELERRFHVQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRR--QIAAEL 187
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Cavefish
Match: nkx3-1 (NK3 homeobox 1 [Source:NCBI gene;Acc:103038181]) HSP 1 Score: 97.8265 bits (242), Expect = 2.084e-24 Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESE 517 K+KRSRAAF+H QV ELE++FS Q YLS PER LA SL+LTE QVKIWFQNRRYKTK R+Q+ +E Sbjct: 85 KQKRSRAAFTHVQVLELEKKFSRQKYLSAPERAHLATSLRLTETQVKIWFQNRRYKTK--RKQLATE 149
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Cavefish
Match: ENSAMXT00000002203.2 (pep primary_assembly:Astyanax_mexicanus-2.0:9:20913167:20916891:1 gene:ENSAMXG00000002158.2 transcript:ENSAMXT00000002203.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 86.2705 bits (212), Expect = 1.835e-20 Identity = 43/75 (57.33%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 275 DHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR 499 + HK Q + KKK+ R FS Q YELERRF Q YLS PER LAR+L+LT QVKIWFQN RYK K+ R Sbjct: 2 ERHKPQSFSTEMEQKKKKRRVLFSKTQTYELERRFRQQRYLSAPEREHLARALRLTPTQVKIWFQNHRYKMKRAR 76
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005776.1 (pep scaffold:Pmarinus_7.0:GL477528:542110:542457:1 gene:ENSPMAG00000005236.1 transcript:ENSPMAT00000005776.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 77.7962 bits (190), Expect = 9.365e-19 Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRR 499 KK++ R FS Q +ELERRF HQ YLS PER LA LKLT QVKIWFQN RYK K+ R Sbjct: 1 KKRKRRVLFSKAQTFELERRFRHQRYLSAPEREHLASLLKLTPTQVKIWFQNHRYKMKRAR 61
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Sea Lamprey
Match: nkx2.1 (NK2 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-010404-1]) HSP 1 Score: 78.9518 bits (193), Expect = 8.272e-18 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 +++ R FS QVYELERRF Q YLS PER LA + LT QVKIWFQN RYK K++ Sbjct: 40 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 98
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001141.1 (pep scaffold:Pmarinus_7.0:GL478075:36995:38394:-1 gene:ENSPMAG00000001023.1 transcript:ENSPMAT00000001141.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 74.3294 bits (181), Expect = 2.291e-17 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKK 493 K +R R AFS Q+ ELER FS Q YLS P+R ++A +L LTE QVKIWFQNRR K K+ Sbjct: 2 KCRRPRTAFSSQQLLELERHFSRQRYLSRPQRFQVASALMLTETQVKIWFQNRRMKWKR 60
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001480.1 (pep scaffold:Pmarinus_7.0:GL487501:66:2428:-1 gene:ENSPMAG00000001338.1 transcript:ENSPMAT00000001480.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 70.0922 bits (170), Expect = 1.297e-15 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 314 MKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYK 484 ++++++R F+ +Q+ LERRF Q YLS PER +LA +L L+E QVK WFQNRR K Sbjct: 4 VRRRKARTVFTDSQLSGLERRFVRQRYLSTPERVDLATALGLSETQVKTWFQNRRMK 60
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Sea Lamprey
Match: HMX1 (H6 family homeobox 1 [Source:HGNC Symbol;Acc:HGNC:5017]) HSP 1 Score: 68.9366 bits (167), Expect = 5.084e-15 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKK 493 KK++R FS +QV++LE F + YLS ER LA SL LTE QVKIWFQNRR K K+ Sbjct: 1 KKKTRTVFSRSQVFQLESTFDMKRYLSSAERAGLAASLHLTETQVKIWFQNRRNKWKR 58
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Nematostella
Match: NK-3 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S7L1]) HSP 1 Score: 117.472 bits (293), Expect = 1.258e-31 Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 311 RMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEI-----------------DTKNPQNFEIPNFPSRDLSIKDEMNNHSFNTNGSVNGFGSHCYYNSVIDSLLRSS 685 + ++KRSRAAFSH QV+ELERRFSHQ YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R Q+ SEI D K ++ +P PS ++ + GS+ +G +C +D +L SS Sbjct: 127 KPRRKRSRAAFSHQQVFELERRFSHQKYLSGPERADLAAALKLTETQVKIWFQNRRYKTKRR--QLASEICPPSAAKKVAVRVLVRDDRKQYEDLGLPAVPSYPVTPY-------VPSFGSLGSYGLYC-----LDHMLPSS 254
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Nematostella
Match: EDO33946 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQP5]) HSP 1 Score: 86.2705 bits (212), Expect = 3.788e-21 Identity = 52/133 (39.10%), Postives = 68/133 (51.13%), Query Frame = 2 Query: 308 ERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSFNTNGSVNGFGSH-----CYYNSVIDSLLRSSPY 691 E KK++ R F+ Q YELERRF Q YLS PER +LAR + LT QVKIWFQN RYK KK+ + K P + P F R + + + + S+N F H +Y V S + + PY Sbjct: 3 EPPKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREQLARIINLTPTQVKIWFQNHRYKFKKQNYE-------KGPLSEPPPLFTPRTVPVPVLVRDGQPCHGASMNNFAYHHAADFLHYPPVSTSYMPAHPY 128
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Nematostella
Match: NK-4 (NK-4 homeobox protein; Predicted protein [Source:UniProtKB/TrEMBL;Acc:Q7YZD1]) HSP 1 Score: 86.6557 bits (213), Expect = 6.782e-20 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 296 ANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKR 496 N +R+++K R FS QVYELERRF Q YLS PER LA LKLT NQVKIWFQN+RYK KK+ Sbjct: 148 GNKPKRIRRK-PRVLFSQAQVYELERRFKGQKYLSAPERDHLASLLKLTPNQVKIWFQNKRYKCKKQ 213
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Nematostella
Match: EDO33947 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQP6]) HSP 1 Score: 78.9518 bits (193), Expect = 5.469e-19 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNF 544 KK++ R F+ +Q+YELERRF +Q YLS PER +L R + LT QVKIWFQN RYK KK+ SE + K P++ Sbjct: 1 KKRKRRILFTKSQIYELERRFRYQRYLSAPEREQLGRMINLTPTQVKIWFQNHRYKHKKQ----ASEGEYKEPRSI 72
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Nematostella
Match: EDO45871 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRR7]) HSP 1 Score: 76.2554 bits (186), Expect = 3.780e-18 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQ 505 KK+ R F+ +Q+YELERRF Q YLS PER LAR + LT QVKIWFQN RYK ++R +Q Sbjct: 1 KKKKRILFTRSQIYELERRFRVQQYLSAPEREHLARMISLTPVQVKIWFQNHRYKCRQRYKQ 62
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Medaka
Match: nkx3.3 (NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]) HSP 1 Score: 115.546 bits (288), Expect = 6.658e-32 Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNH 601 KKRSRAAFSH QV+ELERRFS Q YLSGPER +LA +LKLTE QVKIWFQNRRYKTK+R Q+ +E+ NP+ + + ++DE H Sbjct: 10 KKRSRAAFSHTQVHELERRFSAQRYLSGPERADLAEALKLTETQVKIWFQNRRYKTKRR--QVAAEVAALNPKTVSV------KVLVRDEEKQH 95
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Medaka
Match: nkx3-2 (NK3 homeobox 2 [Source:NCBI gene;Acc:101174110]) HSP 1 Score: 113.235 bits (282), Expect = 1.628e-29 Identity = 66/128 (51.56%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 152 ENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNP 535 E+L ET +E+ ++N+ SD + +NDS S + + QP + +KKRSRAAFSH QV+ELERRF+HQ YLSGPER +LA SLKLTE QVKIWFQNRRYKTK+R Q+ +++ P Sbjct: 98 ESLQEETDHESG-AADNVKSDSDP--NNDS-------SNLDEKSPDQP-----KQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKRR--QMAADLMASTP 208
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Medaka
Match: nkx3-1 (homeobox protein Nkx-3.1-like [Source:NCBI gene;Acc:101167461]) HSP 1 Score: 101.293 bits (251), Expect = 8.013e-26 Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 2 Query: 299 NISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIE 511 N++ K+KRSRAAF+H QV ELE++F+HQ YLS PER LA SL+LTE QVKIWFQNRRYKTK+++Q E Sbjct: 70 NLNSTGKQKRSRAAFTHLQVLELEKKFNHQKYLSAPERAHLATSLRLTETQVKIWFQNRRYKTKRKQQTSE 140
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Medaka
Match: nkx2.7 (NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]) HSP 1 Score: 88.1965 bits (217), Expect = 2.629e-21 Identity = 50/119 (42.02%), Postives = 59/119 (49.58%), Query Frame = 2 Query: 332 RAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEID--TKNPQNFEIPNF-----------PSRDLSIKDEMNNHSFNTNGSVNGFGSHCY 649 R FS +QV ELERRF Q YLS PER LA LKLT QVKIWFQNRRYK K++RQ E+ P+ +P PS ++ N GS+ G H Y Sbjct: 21 RVLFSQSQVSELERRFRQQRYLSAPEREHLAHVLKLTSTQVKIWFQNRRYKCKRQRQDKSLELAGYPSAPRRVAVPVLVRDGRLCSAGAPSAPYNVTVGHYNAVLGCGGSLYDCGCHSY 139
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Medaka
Match: NKX2-3 (homeobox protein Nkx-2.5-like [Source:NCBI gene;Acc:111947865]) HSP 1 Score: 92.0485 bits (227), Expect = 4.203e-21 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 2 Query: 320 KKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQ 502 ++R R FS QV+ELERRF Q YLS PER LA +LKLT NQVKIWFQNRRYK K++RQ Sbjct: 168 RRRPRVLFSQAQVFELERRFKQQRYLSAPEREHLATTLKLTSNQVKIWFQNRRYKCKRQRQ 228
BLAST of Homeobox protein Nkx-3.2 vs. Planmine SMEST
Match: SMESG000027004.1 (SMESG000027004.1) HSP 1 Score: 490.73 bits (1262), Expect = 4.671e-178 Identity = 236/239 (98.74%), Postives = 239/239 (100.00%), Query Frame = 2 Query: 125 MMRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSFNTNGSVNGFGSHCYYNSVIDSLLRSSPYGGASKSFFHNMNTGNSFQMTPNSYQMTMSMLQMMKKKGFNSSLVSNMTPS 841 MMRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSF+TNGSVNGFGSHCYYNSVIDSLLRSSPYGGASKSFFHNMNTGNSFQMTPNSYQMTMSMLQMMK+KGF+SSLVSNMTPS Sbjct: 1 MMRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSFSTNGSVNGFGSHCYYNSVIDSLLRSSPYGGASKSFFHNMNTGNSFQMTPNSYQMTMSMLQMMKRKGFDSSLVSNMTPS 239
BLAST of Homeobox protein Nkx-3.2 vs. Planmine SMEST
Match: SMESG000027004.1 (SMESG000027004.1) HSP 1 Score: 488.804 bits (1257), Expect = 2.492e-177 Identity = 235/238 (98.74%), Postives = 238/238 (100.00%), Query Frame = 2 Query: 128 MRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSFNTNGSVNGFGSHCYYNSVIDSLLRSSPYGGASKSFFHNMNTGNSFQMTPNSYQMTMSMLQMMKKKGFNSSLVSNMTPS 841 MRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSF+TNGSVNGFGSHCYYNSVIDSLLRSSPYGGASKSFFHNMNTGNSFQMTPNSYQMTMSMLQMMK+KGF+SSLVSNMTPS Sbjct: 1 MRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVDHHKIQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESEIDTKNPQNFEIPNFPSRDLSIKDEMNNHSFSTNGSVNGFGSHCYYNSVIDSLLRSSPYGGASKSFFHNMNTGNSFQMTPNSYQMTMSMLQMMKRKGFDSSLVSNMTPS 238
BLAST of Homeobox protein Nkx-3.2 vs. Planmine SMEST
Match: SMESG000062916.1 (SMESG000062916.1) HSP 1 Score: 83.5741 bits (205), Expect = 1.231e-18 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 317 KKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIE 511 ++++ R FS +QVYELER+F HQ YLS ER +LA+++ LT NQVKIWFQN RYK K+ + +E Sbjct: 129 QRRKRRILFSQSQVYELERKFKHQKYLSASERDQLAQTINLTPNQVKIWFQNHRYKCKRIEKDME 193
BLAST of Homeobox protein Nkx-3.2 vs. Planmine SMEST
Match: SMESG000037282.1 (SMESG000037282.1) HSP 1 Score: 84.7297 bits (208), Expect = 1.275e-18 Identity = 45/83 (54.22%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 275 DHHK--IQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESE 517 +H K IQ NIS+R K+ R FS Q+YELERRF Q YLS PER LA + LT QVKIWFQN RYK K+ ++ E E Sbjct: 119 EHQKASIQFNNISQRRKR---RILFSQAQIYELERRFKQQKYLSAPEREHLANLINLTPTQVKIWFQNHRYKCKRSQKDKEKE 198
BLAST of Homeobox protein Nkx-3.2 vs. Planmine SMEST
Match: SMESG000037282.1 (SMESG000037282.1) HSP 1 Score: 84.7297 bits (208), Expect = 1.397e-18 Identity = 45/83 (54.22%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 275 DHHK--IQPANISERMKKKRSRAAFSHNQVYELERRFSHQTYLSGPERTELARSLKLTENQVKIWFQNRRYKTKKRRQQIESE 517 +H K IQ NIS+R K+ R FS Q+YELERRF Q YLS PER LA + LT QVKIWFQN RYK K+ ++ E E Sbjct: 110 EHQKASIQFNNISQRRKR---RILFSQAQIYELERRFKQQKYLSAPEREHLANLINLTPTQVKIWFQNHRYKCKRSQKDKEKE 189 The following BLAST results are available for this feature:
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Homeobox protein Nkx-3.2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30008363 ID=SMED30008363|Name=Homeobox protein Nkx-3.2|organism=Schmidtea mediterranea sexual|type=transcript|length=843bpback to top protein sequence of SMED30008363-orf-1 >SMED30008363-orf-1 ID=SMED30008363-orf-1|Name=SMED30008363-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=239bp MMRKSTFLIENLLSETTYENDDISENIDSDVESYFSNDSDLEVSKSSMIVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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