Histone-lysine N-methyltransferase SETMAR-like protein

Overview
NameHistone-lysine N-methyltransferase SETMAR-like protein
Smed IDSMED30008358
Length (bp)551
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30008358

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
gutSMED30008358h1SMcG0021604 dd_Smed_v4_3864_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30008358h1SMcG0021604 dd_Smed_v4_3864_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30008358h1SMcG0021604 dd_Smed_v4_3864_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0006669 Contig4469newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0006669 Contig4469uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0021604 Contig4469newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0021604 Contig4469uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0021604 Contig42925uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0021604 Contig42925newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0021604 Contig34474newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30008358h1SMcG0021604 Contig34474uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Human
Match: SETMAR (SET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:HGNC:10762])

HSP 1 Score: 64.3142 bits (155), Expect = 1.635e-13
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 2 
Query:  203 GVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEF 415
            G +LLHDNA  H+   T   +  L  EVLPHPPYSPDL+P+++H+   L+N L G  F++  +  +   EF
Sbjct:  582 GPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEF 652

HSP 2 Score: 29.6462 bits (65), Expect = 1.635e-13
Identity = 11/38 (28.95%), Postives = 21/38 (55.26%), Query Frame = 3 
Query:   42 LHPLNRILCVWRDWKWIVLYELLDRNQTVNSEVYIQQM 155
            LHP   ++ +W     ++ Y  L+  +T+ SE Y Q++
Sbjct:  526 LHPKKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEI 563
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Human
Match: SETMAR (SET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:HGNC:10762])

HSP 1 Score: 61.2326 bits (147), Expect = 1.452e-12
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 2 
Query:  203 GVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEF 415
            G +LLHDNA  H+   T   +  L  EVLPHPPYSPDL+P+++H+   L+N L G  F++  +  +   EF
Sbjct:  443 GPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEF 513

HSP 2 Score: 29.6462 bits (65), Expect = 1.452e-12
Identity = 11/38 (28.95%), Postives = 21/38 (55.26%), Query Frame = 3 
Query:   42 LHPLNRILCVWRDWKWIVLYELLDRNQTVNSEVYIQQM 155
            LHP   ++ +W     ++ Y  L+  +T+ SE Y Q++
Sbjct:  387 LHPKKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEI 424
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. UniProt/SwissProt
Match: sp|Q7JQ07|MOS1T_DROMA (Mariner Mos1 transposase OS=Drosophila mauritiana OX=7226 GN=mariner\T PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.472e-16
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 2 
Query:  164 NNTIQQK*TD---RLYGVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEFCKLFQALFIW 445
            N  +Q+K  +   R + V+ LHDNA  H     +  + TL  EVLPH  YSPDL PSD+HL  S+ +AL    F+       WLDE+       F W
Sbjct:  227 NRALQRKRPEYQKRQHRVIFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLAPSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYW 323

HSP 2 Score: 37.7354 bits (86), Expect = 4.472e-16
Identity = 16/32 (50.00%), Postives = 22/32 (68.75%), Query Frame = 3 
Query:   60 ILCVWRDWKWIVLYELLDRNQTVNSEVYIQQM 155
            +LCVW D   ++ YELL R +TVN+  Y QQ+
Sbjct:  192 MLCVWWDQSGVIYYELLKRGETVNTARYQQQL 223
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. UniProt/SwissProt
Match: sp|Q53H47|SETMR_HUMAN (Histone-lysine N-methyltransferase SETMAR OS=Homo sapiens OX=9606 GN=SETMAR PE=1 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 6.517e-13
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 2 
Query:  203 GVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEF 415
            G +LLHDNA  H+   T   +  L  EVLPHPPYSPDL+P+++H+   L+N L G  F++  +  +   EF
Sbjct:  582 GPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEF 652

HSP 2 Score: 29.6462 bits (65), Expect = 6.517e-13
Identity = 11/38 (28.95%), Postives = 21/38 (55.26%), Query Frame = 3 
Query:   42 LHPLNRILCVWRDWKWIVLYELLDRNQTVNSEVYIQQM 155
            LHP   ++ +W     ++ Y  L+  +T+ SE Y Q++
Sbjct:  526 LHPKKVMVTIWWSAAGLIHYSFLNPGETITSEKYAQEI 563
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. TrEMBL
Match: A0A1I7WUB6 (Uncharacterized protein OS=Heterorhabditis bacteriophora OX=37862 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.100e-27
Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  164 NNTIQQK*TDRLYGVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVE 391
            N  I++K  +R +GVLLL+DNA  HI N+TK VI T   EVLPHPPYS  L P+DFHL  SLSN + GV FN DVE
Sbjct:  149 NTAIKEKGPNRQHGVLLLNDNARPHIANMTKEVIQTHGWEVLPHPPYSLALSPTDFHLFRSLSNDMRGVSFNTDVE 224

HSP 2 Score: 63.5438 bits (153), Expect = 4.100e-27
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 3 
Query:    3 SLCEQAHCEQKKDLHPLNRILCVWRDWKWIVLYELLDRNQTVNSEVYIQQMHRPITLFNKNEP 191
            S  +QA    K+DLHP   + C+W DW+ ++ YELL+RNQTVN+E+Y+QQM R  T   +  P
Sbjct:   95 SSGKQAIPRVKQDLHPRKTMSCIWWDWEGLIHYELLERNQTVNAELYVQQMERLNTAIKEKGP 157
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. TrEMBL
Match: A0A1I7XA86 (Uncharacterized protein OS=Heterorhabditis bacteriophora OX=37862 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.788e-24
Identity = 54/99 (54.55%), Postives = 67/99 (67.68%), Query Frame = 2 
Query:  164 NNTIQQK*TDRLYGVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEFCKLFQALFIW*TIQS 460
            N  I++K  +R +GVLLL+DNA  HI N+TK VI T   EVLPHPPYS  L P+DFHL  SLSN + GV FN DVE  +WLDEF +  Q  F   +I++
Sbjct:    5 NTAIKEKGPNRQHGVLLLNDNARPHIANMTKEVIQTHGWEVLPHPPYSLALSPTDFHLFRSLSNDMRGVSFNTDVELRAWLDEFFESKQGNFCQRSIEN 103
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. TrEMBL
Match: A0A1I7XTN1 (Uncharacterized protein OS=Heterorhabditis bacteriophora OX=37862 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.206e-20
Identity = 49/84 (58.33%), Postives = 58/84 (69.05%), Query Frame = 2 
Query:  164 NNTIQQK*TDRLYGVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEF 415
            N  I++K  +R +GVLLL+DNA  HI N+TK  I T   EVLPHPPYS  L P+DFHL  SLSN + GV FN D E  +WLDEF
Sbjct:  109 NTAIKEKGPNRQHGVLLLNDNARPHIANMTKEAIQTHGWEVLPHPPYSLALSPTDFHLFRSLSNDMRGVSFNTDAELRAWLDEF 192
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. TrEMBL
Match: A0A158NRL0 (HTH_48 domain-containing protein OS=Atta cephalotes OX=12957 GN=105623384 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.770e-19
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 2 
Query:  203 GVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEF 415
            GV+   DNA  H++ +T+  +L L  +VLPHPPYSPDL PSDFHL  SL N+L+G  FN  +E  + L++F
Sbjct:  230 GVVFHQDNARPHVSLITRQKLLELGWDVLPHPPYSPDLAPSDFHLFRSLQNSLNGKSFNSLIEIKNHLEKF 300

HSP 2 Score: 51.2174 bits (121), Expect = 1.770e-19
Identity = 25/53 (47.17%), Postives = 31/53 (58.49%), Query Frame = 3 
Query:   33 KKDLHPLNRILCVWRDWKWIVLYELLDRNQTVNSEVYIQQMHRPITLFNKNEP 191
            K DLHP   +LCVW DWK I+ YELL  N+ +NSE Y  Q+    T   +  P
Sbjct:  171 KTDLHPKKVMLCVWWDWKGILYYELLPNNEMINSEKYCSQLDELKTAIEQKRP 223
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. TrEMBL
Match: Q8I8E8 (Camar1 transposase OS=Chymomyza amoena OX=7293 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 8.856e-19
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 2 
Query:  203 GVLLLHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLDEF 415
            GV+   DNA  H + +T+  +  L  EVL HPPYSPDL PSD+HL  SL N+L+G  F +D    S L +F
Sbjct:  239 GVIFHQDNARPHTSLMTRQKLRELGWEVLMHPPYSPDLAPSDYHLFRSLQNSLNGKTFGNDEAIKSHLVQF 309

HSP 2 Score: 56.225 bits (134), Expect = 8.856e-19
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 3 
Query:    9 CEQAHCEQKKDLHPLNRILCVWRDWKWIVLYELLDRNQTVNSEVYIQQMHRPITLFNKNEP 191
             E A    K D+H    +L VW DWK +V +ELL RNQT+NS+VY QQ+ +     N+  P
Sbjct:  172 GEPAQTTSKADIHQKKVMLSVWWDWKGVVYFELLPRNQTINSDVYCQQLDKLNAAINEKRP 232
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Planmine SMEST
Match: SMESG000049199.1 (SMESG000049199.1)

HSP 1 Score: 44.2838 bits (103), Expect = 7.264e-6
Identity = 26/65 (40.00%), Postives = 34/65 (52.31%), Query Frame = 2 
Query:  215 LHDNAHHHITNLTKTVILTLR*EVLPHPPYSPDLVPSDFHLVWSLSNALHGVLFNDDVEF*SWLD 409
            L  NA  H    +   ++ +   VL HPPYSPDL  SDF+L   L +++ G  FN D E    LD
Sbjct:   44 LQYNARPHTAAKSVQKLIDIGFTVLLHPPYSPDLATSDFYLFSPLKSSIRGRDFNGDNEIQVVLD 108
The following BLAST results are available for this feature:
BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
SETMAR1.635e-1343.66SET domain and mariner transposase fusion gene [So... [more]
SETMAR1.452e-1243.66SET domain and mariner transposase fusion gene [So... [more]
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q7JQ07|MOS1T_DROMA4.472e-1639.18Mariner Mos1 transposase OS=Drosophila mauritiana ... [more]
sp|Q53H47|SETMR_HUMAN6.517e-1343.66Histone-lysine N-methyltransferase SETMAR OS=Homo ... [more]
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I7WUB64.100e-2760.53Uncharacterized protein OS=Heterorhabditis bacteri... [more]
A0A1I7XA863.788e-2454.55Uncharacterized protein OS=Heterorhabditis bacteri... [more]
A0A1I7XTN11.206e-2058.33Uncharacterized protein OS=Heterorhabditis bacteri... [more]
A0A158NRL01.770e-1950.70HTH_48 domain-containing protein OS=Atta cephalote... [more]
Q8I8E88.856e-1947.89Camar1 transposase OS=Chymomyza amoena OX=7293 PE=... [more]
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Histone-lysine N-methyltransferase SETMAR-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000049199.17.264e-640.00SMESG000049199.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30008358 ID=SMED30008358|Name=Histone-lysine N-methyltransferase SETMAR-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=551bp
AAAGCTTGTGTGAACAAGCACACTGCGAGCAAAAAAAAGATCTTCATCCA
CTAAACAGAATTTTATGCGTTTGGCGGGACTGGAAATGGATTGTTCTCTA
TGAACTGCTTGACCGAAACCAAACAGTGAACTCAGAGGTTTATATTCAAC
AGATGCACCGCCCAATAACACTATTCAACAAAAATGAACCGATCGACTAT
ATGGAGTTCTCCTGCTACATGACAACGCTCATCATCATATCACCAATTTG
ACCAAGACAGTCATTCTAACACTAAGGTGAGAAGTACTGCCTCATCCTCC
GTATTCTCCGGACTTGGTGCCTTCAGATTTCCACCTCGTTTGGTCGCTTT
CGAACGCTTTGCATGGAGTTTTGTTTAACGATGACGTGGAATTTTAATCT
TGGTTGGATGAATTTTGCAAGCTATTTCAAGCACTATTTATATGGTAAAC
GATTCAATCTACTAATTAATCAGAGACACTAGAGGAGTTTTGGAGAATCT
TGGAGAAACTTAGAGAATCTTGTAATAAGCGTTGAAGGGTAGAATTCTTT
T
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001888Transposase_1
Vocabulary: molecular function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: biological process
TermDefinition
GO:0032259methylation
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.420.470coord: 2..68
e-value: 4.7E-10
score: 41.2
IPR001888Transposase, type 1PFAMPF01359Transposase_1coord: 5..53
e-value: 2.5E-11
score: 43.3