Iroquois-class homeodomain protein IRX-6
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30007957 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Human
Match: IRX1 (iroquois homeobox 1 [Source:HGNC Symbol;Acc:HGNC:14358]) HSP 1 Score: 119.013 bits (297), Expect = 2.564e-29 Identity = 72/150 (48.00%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSI-IDMISE-PSDCSHED 890 ++P T A + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D E LF + E + ++ + SI ID I E D S+ED Sbjct: 103 GVHPATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSK--------DQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQSNED 244
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Human
Match: IRX4 (iroquois homeobox 4 [Source:HGNC Symbol;Acc:HGNC:6129]) HSP 1 Score: 116.701 bits (291), Expect = 2.041e-28 Identity = 51/63 (80.95%), Postives = 60/63 (95.24%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 146 RKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Human
Match: IRX4 (iroquois homeobox 4 [Source:HGNC Symbol;Acc:HGNC:6129]) HSP 1 Score: 116.701 bits (291), Expect = 2.041e-28 Identity = 51/63 (80.95%), Postives = 60/63 (95.24%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 146 RKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Human
Match: IRX4 (iroquois homeobox 4 [Source:HGNC Symbol;Acc:HGNC:6129]) HSP 1 Score: 116.701 bits (291), Expect = 2.041e-28 Identity = 51/63 (80.95%), Postives = 60/63 (95.24%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 146 RKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Human
Match: IRX4 (iroquois homeobox 4 [Source:HGNC Symbol;Acc:HGNC:6129]) HSP 1 Score: 116.701 bits (291), Expect = 2.313e-28 Identity = 51/63 (80.95%), Postives = 60/63 (95.24%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 172 RKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 234
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Celegans
Match: irx-1 (Putative iroquois-class homeodomain protein irx-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93348]) HSP 1 Score: 100.138 bits (248), Expect = 1.705e-23 Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 3 Query: 471 PITLAHLHTINHA-DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 P+ + H + H ++ I+ K+NATRE ++ LK WL H+ NPYPSK +K++LA+ T M+LTQVSTWFANARRRLKKENK+ W Sbjct: 99 PMFFSDAHRLYHPYGLDGIK-KRNATREATAPLKDWLHSHRKNPYPSKADKVMLAVGTGMTLTQVSTWFANARRRLKKENKMTW 181
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Celegans
Match: ceh-60 (C. Elegans Homeobox [Source:UniProtKB/TrEMBL;Acc:Q45EK2]) HSP 1 Score: 49.6766 bits (117), Expect = 1.395e-6 Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKE 704 ++N + + L+ W +H+ NPYPS EK LA + ++QV+ WF N R R K++ Sbjct: 184 RRNFDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKISQVNNWFGNQRIRTKQQ 241
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Fly
Match: mirr (gene:FBgn0014343 transcript:FBtr0330077) HSP 1 Score: 116.316 bits (290), Expect = 2.427e-28 Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 3 Query: 510 DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 D+N + +KNATRE +STLKAWL EHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 222 DLNGAR-RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 290
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Fly
Match: mirr (gene:FBgn0014343 transcript:FBtr0075911) HSP 1 Score: 116.316 bits (290), Expect = 2.482e-28 Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 3 Query: 510 DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 D+N + +KNATRE +STLKAWL EHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 222 DLNGAR-RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 290
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Fly
Match: mirr (gene:FBgn0014343 transcript:FBtr0075912) HSP 1 Score: 116.316 bits (290), Expect = 2.482e-28 Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 3 Query: 510 DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 D+N + +KNATRE +STLKAWL EHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 222 DLNGAR-RKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 290
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Fly
Match: caup (gene:FBgn0015919 transcript:FBtr0075909) HSP 1 Score: 115.931 bits (289), Expect = 3.187e-28 Identity = 50/63 (79.37%), Postives = 60/63 (95.24%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE+++TLKAWL EHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 230 RKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 292
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Fly
Match: ara (gene:FBgn0015904 transcript:FBtr0075908) HSP 1 Score: 114.775 bits (286), Expect = 7.681e-28 Identity = 50/63 (79.37%), Postives = 60/63 (95.24%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE+++TLKAWL EHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 259 RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 321
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Zebrafish
Match: irx3b (iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]) HSP 1 Score: 119.013 bits (297), Expect = 1.985e-30 Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 534 KNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDS--TSDSELSELFTREYEKPNSNQKITKKNHIWSIIDM--ISEPSDCSHED 890 KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W+ ++D + TSD+E + EK + +++I +N ID I + DC ++D Sbjct: 106 KNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKTRTDEDGNVYTSDNE-------DAEKRDEDEEIDLEN-----IDTEDIEDKQDCDYQD 216
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Zebrafish
Match: irx1a (iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]) HSP 1 Score: 119.013 bits (297), Expect = 6.702e-30 Identity = 64/129 (49.61%), Postives = 83/129 (64.34%), Query Frame = 3 Query: 402 IRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSD----NPDSTSDSELSE 776 + SQ L++ H A+ A + +P + KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D D+ D+E +E Sbjct: 79 MGSQYDLKDSPGVHPASFAAHTSPA----FYPYGQFQYGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDDENIFGSDNEGDAEKNE 203
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Zebrafish
Match: irx1a (iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]) HSP 1 Score: 119.398 bits (298), Expect = 6.832e-30 Identity = 63/122 (51.64%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 402 IRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSE 767 + SQ L++ H A+ A + +P + KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D SD+E Sbjct: 79 MGSQYDLKDSPGVHPASFAAHTSPA----FYPYGQFQYGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDDENIFGSDNE 196
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Zebrafish
Match: irx4b (iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]) HSP 1 Score: 119.013 bits (297), Expect = 1.028e-29 Identity = 60/100 (60.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 471 PITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGK-SDNPDSTSDSE 767 PI + V+ +KNATRE +STLKAWLQEHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W K SD + D E Sbjct: 123 PIGQYSYDRYGYGSVDVGTRRKNATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNKNSDEKECDDDQE 222
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Zebrafish
Match: irx4b (iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]) HSP 1 Score: 119.013 bits (297), Expect = 1.028e-29 Identity = 60/100 (60.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 471 PITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGK-SDNPDSTSDSE 767 PI + V+ +KNATRE +STLKAWLQEHK NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W K SD + D E Sbjct: 123 PIGQYSYDRYGYGSVDVGTRRKNATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNKNSDEKECDDDQE 222
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Xenopus
Match: smc1b (structural maintenance of chromosomes 1B [Source:Xenbase;Acc:XB-GENE-997265]) HSP 1 Score: 122.479 bits (306), Expect = 9.110e-31 Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSE 767 ++P T A T + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D+ SD+E Sbjct: 102 GVHPATFAAHTTPGYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKEDDNIFGSDTE 208
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Xenopus
Match: fancm (FA complementation group M [Source:Xenbase;Acc:XB-GENE-994655]) HSP 1 Score: 117.472 bits (293), Expect = 5.393e-29 Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 513 VNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 +N +KNATR+ ++TLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W KS Sbjct: 108 LNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKS 182
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Xenopus
Match: lypla1 (lysophospholipase 1 [Source:Xenbase;Acc:XB-GENE-942736]) HSP 1 Score: 116.701 bits (291), Expect = 6.263e-29 Identity = 52/76 (68.42%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 510 DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 D++ +KNATREN+STLK WL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W K+ Sbjct: 139 DISCSSRRKNATRENTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKA 214
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Xenopus
Match: fancm (FA complementation group M [Source:Xenbase;Acc:XB-GENE-994655]) HSP 1 Score: 117.087 bits (292), Expect = 9.542e-29 Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 513 VNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 +N +KNATR+ ++TLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W KS Sbjct: 108 LNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKS 182
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Xenopus
Match: ndufaf5 (NADH:ubiquinone oxidoreductase complex assembly factor 5 [Source:Xenbase;Acc:XB-GENE-975960]) HSP 1 Score: 116.316 bits (290), Expect = 1.507e-28 Identity = 51/69 (73.91%), Postives = 62/69 (89.86%), Query Frame = 3 Query: 534 KNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSD 740 KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W ++D Sbjct: 113 KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTD 181
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Mouse
Match: Irx1 (Iroquois homeobox 1 [Source:MGI Symbol;Acc:MGI:1197515]) HSP 1 Score: 120.553 bits (301), Expect = 1.444e-31 Identity = 73/150 (48.67%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSI-IDMISE-PSDCSHED 890 ++P T A T + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D E LF + E + ++ + SI ID I E D S+ED Sbjct: 18 GVHPATFAAHTTPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSK--------DQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQSNED 159
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Mouse
Match: Irx2 (Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]) HSP 1 Score: 112.464 bits (280), Expect = 1.583e-30 Identity = 51/75 (68.00%), Postives = 63/75 (84.00%), Query Frame = 3 Query: 513 VNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 +N +KNATR+ ++TLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W KS Sbjct: 19 LNDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKS 93
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Mouse
Match: Irx1 (Iroquois homeobox 1 [Source:MGI Symbol;Acc:MGI:1197515]) HSP 1 Score: 120.939 bits (302), Expect = 2.993e-30 Identity = 73/150 (48.67%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSI-IDMISE-PSDCSHED 890 ++P T A T + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D E LF + E + ++ + SI ID I E D S+ED Sbjct: 103 GVHPATFAAHTTPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSK--------DQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQSNED 244
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Mouse
Match: Irx4 (Iroquois homeobox 4 [Source:MGI Symbol;Acc:MGI:1355275]) HSP 1 Score: 118.242 bits (295), Expect = 4.259e-29 Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 3 Query: 504 HADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 + V+ +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 138 YGTVDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Mouse
Match: Irx4 (Iroquois homeobox 4 [Source:MGI Symbol;Acc:MGI:1355275]) HSP 1 Score: 118.242 bits (295), Expect = 4.259e-29 Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 3 Query: 504 HADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 + V+ +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 138 YGTVDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209
BLAST of Iroquois-class homeodomain protein IRX-6 vs. UniProt/SwissProt
Match: sp|Q2TAQ8|IRX1B_XENLA (Iroquois-class homeodomain protein irx-1-B OS=Xenopus laevis OX=8355 GN=irx1-b PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.150e-30 Identity = 63/107 (58.88%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSE 767 ++P T A T + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A GK D+ SD+E Sbjct: 97 GVHPATFAAHTTPGYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGAMGKEDDNIFGSDNE 203
BLAST of Iroquois-class homeodomain protein IRX-6 vs. UniProt/SwissProt
Match: sp|Q6F2E3|IRX1_XENTR (Iroquois-class homeodomain protein irx-1 OS=Xenopus tropicalis OX=8364 GN=irx1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.826e-30 Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSE 767 ++P T A T + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D+ SD+E Sbjct: 102 GVHPATFAAHTTPGYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKEDDNIFGSDTE 208
BLAST of Iroquois-class homeodomain protein IRX-6 vs. UniProt/SwissProt
Match: sp|P81068|IRX1_MOUSE (Iroquois-class homeodomain protein IRX-1 OS=Mus musculus OX=10090 GN=Irx1 PE=1 SV=4) HSP 1 Score: 120.939 bits (302), Expect = 2.094e-29 Identity = 73/150 (48.67%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSI-IDMISE-PSDCSHED 890 ++P T A T + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D E LF + E + ++ + SI ID I E D S+ED Sbjct: 103 GVHPATFAAHTTPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSK--------DQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQSNED 244
BLAST of Iroquois-class homeodomain protein IRX-6 vs. UniProt/SwissProt
Match: sp|Q9YGK8|IRX1A_XENLA (Iroquois-class homeodomain protein irx-1-A OS=Xenopus laevis OX=8355 GN=irx1-a PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.398e-29 Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDN 743 ++P T A T + Q Q KNATRE++ TLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D+ Sbjct: 102 GVHPATFAAHTTPGYYPYGQFQYGDPGRPKNATRESTGTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKEDD 200
BLAST of Iroquois-class homeodomain protein IRX-6 vs. UniProt/SwissProt
Match: sp|P78414|IRX1_HUMAN (Iroquois-class homeodomain protein IRX-1 OS=Homo sapiens OX=9606 GN=IRX1 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 1.231e-28 Identity = 72/150 (48.00%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 462 NLNPITLAHLHTINHADVNQIQV-----KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSI-IDMISE-PSDCSHED 890 ++P T A + Q Q KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D E LF + E + ++ + SI ID I E D S+ED Sbjct: 103 GVHPATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSK--------DQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQSNED 244
BLAST of Iroquois-class homeodomain protein IRX-6 vs. TrEMBL
Match: A0A1I8IV93 (Homeobox domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.627e-33 Identity = 68/119 (57.14%), Postives = 84/119 (70.59%), Query Frame = 3 Query: 396 MDIRSQDVLENWRQFHQAALANNLNPITLA---HLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDN 743 +D +++ + ENWRQF QAA NL+P LA AD+ Q +KNATRE + LKAWL EHK NPYP+KGEKI+LAI+T M+LTQVSTWFANARRRLKKENK+ W + D+ Sbjct: 51 LDPQTESLAENWRQFQQAAQNYNLDPHLLAIYGGSFAAGRADLAG-QRRKNATRETTGVLKAWLNEHKKNPYPTKGEKIMLAIITTMTLTQVSTWFANARRRLKKENKMTWAPRNRGDD 168
BLAST of Iroquois-class homeodomain protein IRX-6 vs. TrEMBL
Match: A0A1I8J4E6 (Homeobox domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.231e-32 Identity = 67/110 (60.91%), Postives = 78/110 (70.91%), Query Frame = 3 Query: 423 ENWRQFHQAALANNLNPITLA---HLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDN 743 ENWRQF QAA NL+P LA AD+ Q +KNATRE + LKAWL EHK NPYP+KGEKI+LAI+T M+LTQVSTWFANARRRLKKENK+ W + D+ Sbjct: 25 ENWRQFQQAAQNYNLDPHLLAIYGGSFAAGRADLAG-QRRKNATRETTGVLKAWLNEHKKNPYPTKGEKIMLAIITTMTLTQVSTWFANARRRLKKENKMTWAPRNRGDD 133
BLAST of Iroquois-class homeodomain protein IRX-6 vs. TrEMBL
Match: A0A2H1CL68 (Homeobox domain protein OS=Fasciola hepatica OX=6192 GN=D915_04403 PE=4 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.363e-30 Identity = 64/103 (62.14%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 414 DVLENWRQFHQAALANNLNPITLAHLHTINHA-DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 D L+ W+QF QAA ANNL+P LA + +++ +KNATRE +S LKAWL EH+ NPYP+KGEKI+LA++T+MSLTQVSTWFANARRRLKKENK+ W Sbjct: 359 DNLDCWQQFQQAAYANNLDPHFLALYSSAGCPFELSGSSRRKNATRETTSMLKAWLNEHRKNPYPTKGEKIMLALITKMSLTQVSTWFANARRRLKKENKVTW 461
BLAST of Iroquois-class homeodomain protein IRX-6 vs. TrEMBL
Match: A0A433TYJ0 (Homeobox domain-containing protein (Fragment) OS=Elysia chlorotica OX=188477 GN=EGW08_005580 PE=4 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.426e-30 Identity = 69/142 (48.59%), Postives = 92/142 (64.79%), Query Frame = 3 Query: 306 YNCSRYGGIPPEHIILANKVTGFLA-MNDPNMDIRSQDVLENWRQFHQAALANNLNPITLA---HLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 Y Y G P ++ LA+ + F +N P D++ D E+WR Q +P ++ + T D+N +KNATREN++TLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 62 YPTPPYSG-PQGYVPLASDPSAFYPPLNSP-YDLK--DPGESWRGIGQGPACYPYDPTSMPAYPYPSTYGGMDINSAARRKNATRENTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 199
BLAST of Iroquois-class homeodomain protein IRX-6 vs. TrEMBL
Match: A0A1S8WJU4 (Homeobox domain protein OS=Opisthorchis viverrini OX=6198 GN=X801_09474 PE=4 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.960e-30 Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 420 LENWRQFHQAALANNLNPITLAHLHTINHA-DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDS 752 L++W+QF QAA ANNL+P LA A +++ +KNATRE +S LKAWL EH+ NPYP+KGEKI+LAI+T+MSLTQVSTWFANARRRLKKE+KI W ++ PDS Sbjct: 267 LDSWQQFQQAAYANNLDPHLLALCGGTGCAFELSGNSRRKNATRETTSMLKAWLNEHRKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKESKITWGV--RTTAPDS 376
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Cavefish
Match: irx1a (iroquois homeobox 1 [Source:NCBI gene;Acc:103024684]) HSP 1 Score: 119.398 bits (298), Expect = 6.313e-30 Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 402 IRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSD 740 + SQ L++ H A+ A + +P + KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D Sbjct: 77 MGSQYELKDSPGVHPASFAAHTSPA----FYPYGQFQYGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKED 185
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Cavefish
Match: irx1a (iroquois homeobox 1 [Source:NCBI gene;Acc:103024684]) HSP 1 Score: 119.398 bits (298), Expect = 6.744e-30 Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 402 IRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSD 740 + SQ L++ H A+ A + +P + KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A K D Sbjct: 77 MGSQYELKDSPGVHPASFAAHTSPA----FYPYGQFQYGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKED 185
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Cavefish
Match: irx4a (iroquois-class homeodomain protein irx-4 [Source:NCBI gene;Acc:103025323]) HSP 1 Score: 119.013 bits (297), Expect = 9.597e-30 Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 444 QAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGK-SDNPDSTSDSELSE 776 QAA +P TL + ++ +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W K SD D E S+ Sbjct: 110 QAATYYPYDP-TLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRYGEDEEGSQ 220
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Cavefish
Match: irx3b (iroquois homeobox 3 [Source:NCBI gene;Acc:103035229]) HSP 1 Score: 117.087 bits (292), Expect = 1.600e-29 Identity = 54/90 (60.00%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 471 PITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSD 740 P A H + KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W ++D Sbjct: 80 PHAHAPFFPYGHYQLGDPSRPKNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKTRTD 169
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Cavefish
Match: irx2a (iroquois homeobox 2 [Source:NCBI gene;Acc:103024999]) HSP 1 Score: 118.242 bits (295), Expect = 1.683e-29 Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 513 VNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 +N +KNATR+ ++TLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W KS Sbjct: 101 LNDPTYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWAPRSKS 175
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002620.1 (pep scaffold:Pmarinus_7.0:GL484724:8057:10194:-1 gene:ENSPMAG00000002391.1 transcript:ENSPMAT00000002620.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 114.775 bits (286), Expect = 1.797e-31 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 438 FHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 +H A++ + + + V +KNATR+ ++TLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W+ +S Sbjct: 10 YHPYGGASHPTLGPVGYPYGAGGCGVADPAFRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKMTWVTKARS 109
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Sea Lamprey
Match: mkxb (mohawk homeobox b [Source:ZFIN;Acc:ZDB-GENE-080513-2]) HSP 1 Score: 73.9442 bits (180), Expect = 1.368e-15 Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 519 QIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLK---KENKIGW 719 +++ K+ A ++ + LK WL +H+ NPYP+K EKILLA+ + M+L QVS WFANARRRLK ++ ++ W Sbjct: 1 RVRHKRQALQDMARPLKHWLYKHRHNPYPTKTEKILLALGSHMTLVQVSNWFANARRRLKNTVRQPELSW 70
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Sea Lamprey
Match: pknox2 (pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]) HSP 1 Score: 48.1358 bits (113), Expect = 1.497e-6 Identity = 23/63 (36.51%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 510 DVNQIQVKKNATRENSST-LKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRL 695 D + ++K+ ++++T +++WL +H +PYP++ EK +A T ++L QV+ WF NARRR+ Sbjct: 254 DDKRARLKRGVLPKHATTVMRSWLFQHIVHPYPTEDEKRQIANQTNLTLLQVNNWFINARRRI 316
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Yeast
Match: TOS8 (Homeodomain-containing protein and putative transcription factor; found associated with chromatin; target of SBF transcription factor; induced during meiosis and under cell-damaging conditions; TOS8 has a paralog, CUP9, that arose from the whole genome duplication [Source:SGD;Acc:S000003064]) HSP 1 Score: 50.8322 bits (120), Expect = 1.002e-7 Identity = 24/54 (44.44%), Postives = 31/54 (57.41%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRR 692 + N + S L WL EH +NPYP+ EK L T ++ Q+S WF NARRR Sbjct: 198 RSNLPKATVSILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRR 251
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Yeast
Match: CUP9 (Homeodomain-containing transcriptional repressor; regulates expression of PTR2, which encodes a major peptide transporter; imported peptides activate ubiquitin-dependent proteolysis, resulting in degradation of Cup9p and de-repression of PTR2 transcription; CUP9 has a paralog, TOS8, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000006098]) HSP 1 Score: 48.9062 bits (115), Expect = 3.815e-7 Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRR 692 + N +E L WL H +NPYP++ EK L I T ++ Q+S WF N RRR Sbjct: 166 RSNLPKETVQILNTWLLNHLNNPYPTQQEKRELLIKTGLTKIQLSNWFINVRRR 219
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Nematostella
Match: EDO41982 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2T4]) HSP 1 Score: 112.464 bits (280), Expect = 2.194e-31 Identity = 51/63 (80.95%), Postives = 59/63 (93.65%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGW 719 +KNATRE +STLKAWL EH+ NPYP+KGEKI+LAILT+M+LTQVSTWFANARRRLKKENK+ W Sbjct: 3 RKNATRETTSTLKAWLFEHRKNPYPTKGEKIMLAILTKMTLTQVSTWFANARRRLKKENKMTW 65
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Nematostella
Match: EDO41178 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S544]) HSP 1 Score: 51.2174 bits (121), Expect = 1.584e-8 Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 3 Query: 531 KKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRL 695 + N +++ + L+ WL EH+ N YPS+ EK L+ +S+ QV WF NARRR+ Sbjct: 20 RGNLPKDSVNVLRLWLWEHRFNAYPSEAEKQYLSKAANLSVLQVCNWFINARRRI 74
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Nematostella
Match: EDO36439 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SIN3]) HSP 1 Score: 49.6766 bits (117), Expect = 6.029e-7 Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 3 Query: 564 LKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRL 695 +KAWL +H +PYPS+ +K LA T +++ QV+ WF NARRR+ Sbjct: 253 MKAWLFQHLTHPYPSEEQKRSLAQETGLTILQVNNWFINARRRI 296
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Nematostella
Match: EDO39375 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAC9]) HSP 1 Score: 49.6766 bits (117), Expect = 7.067e-7 Identity = 21/50 (42.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 546 RENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRL 695 ++ +S +K WL +H +PYP++ EK +A T +++ QV+ WF NARRR+ Sbjct: 206 KQATSIMKTWLFQHIMHPYPTEDEKRSIAQQTNLTILQVNNWFINARRRI 255
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Medaka
Match: irx1a (iroquois-class homeodomain protein irx-1 [Source:NCBI gene;Acc:101162949]) HSP 1 Score: 119.783 bits (299), Expect = 6.765e-30 Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 402 IRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPD 749 + SQ L++ H A A + +P + KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W + K D D Sbjct: 81 MGSQYELKDSPGVHPAGFAAHTSPA----FYPYGQFQYGDPARPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGSRSKEDGED 192
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Medaka
Match: irx4b (iroquois-class homeodomain protein irx-4-like [Source:NCBI gene;Acc:101157469]) HSP 1 Score: 118.242 bits (295), Expect = 9.007e-30 Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 3 Query: 501 NHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWI--ANGKSDNPDSTSDSELSE 776 H+ ++ +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W A SD+ DS+ +E Sbjct: 106 GHSCLDSSSRRKNATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTWSPRACKSSDDRGYEDDSDEAE 199
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Medaka
Match: irx3a (iroquois homeobox 3 [Source:NCBI gene;Acc:101162111]) HSP 1 Score: 118.627 bits (296), Expect = 1.001e-29 Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 3 Query: 534 KNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDS--TSDSELSELFTREYEK 800 KNATRE++STLKAWL EH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W ++D + TSD E E RE E+ Sbjct: 112 KNATRESTSTLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTDEEGNVYTSDHEGEEGDKREDEE 202
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Medaka
Match: irx4a (iroquois-class homeodomain protein irx-4-like [Source:NCBI gene;Acc:101159378]) HSP 1 Score: 117.472 bits (293), Expect = 4.051e-29 Identity = 56/97 (57.73%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 477 TLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSE 767 TL + ++ +KNATRE +STLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W K D E Sbjct: 127 TLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDDDE 223
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Medaka
Match: irx2a (iroquois homeobox 2 [Source:NCBI gene;Acc:101162396]) HSP 1 Score: 117.472 bits (293), Expect = 5.235e-29 Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 3 Query: 513 VNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS 737 +N +KNATR+ ++TLKAWLQEH+ NPYP+KGEKI+LAI+T+M+LTQVSTWFANARRRLKKENK+ W KS Sbjct: 109 LNDPAYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKS 183
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Planmine SMEST
Match: SMESG000022899.1 (SMESG000022899.1) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 3 Query: 120 MEKPNCCLDPKMCLPFRLLDCVQTQATGYKYNVLFVKQNGNLMNCLKNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT 899 MEKPNCCLDPKMCLPFRLLDCVQTQATGYKYNVLFVKQNGNLMNCLKNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT Sbjct: 1 MEKPNCCLDPKMCLPFRLLDCVQTQATGYKYNVLFVKQNGNLMNCLKNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT 260
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Planmine SMEST
Match: SMESG000022899.1 (SMESG000022899.1) HSP 1 Score: 447.203 bits (1149), Expect = 3.197e-160 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 3 Query: 258 KNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT 899 KNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT Sbjct: 7 KNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT 220
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Planmine SMEST
Match: SMESG000022899.1 (SMESG000022899.1) HSP 1 Score: 446.817 bits (1148), Expect = 3.771e-160 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 3 Query: 258 KNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT 899 KNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT Sbjct: 4 KNHEEELRDRNLFSTYYNCSRYGGIPPEHIILANKVTGFLAMNDPNMDIRSQDVLENWRQFHQAALANNLNPITLAHLHTINHADVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKSDNPDSTSDSELSELFTREYEKPNSNQKITKKNHIWSIIDMISEPSDCSHEDPAT 217
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Planmine SMEST
Match: SMESG000015279.1 (SMESG000015279.1) HSP 1 Score: 131.724 bits (330), Expect = 1.134e-34 Identity = 80/179 (44.69%), Postives = 102/179 (56.98%), Query Frame = 3 Query: 414 DVLENWRQFHQAALANNLNPITLAHLHTINHA-DVNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGK--------------------------SDNPDSTSDSEL---SELFTREYEKPN-SNQKITKKNHIWSIIDM 857 D E WRQ HQA + NNL+P LA + + D +KNATRE +S LKAWL +HK NPYP+KGEKI+LA++T+M+LTQVSTWFANARRRLKKENK+ W A + DS +SEL E F + EK + S + +K N IWSI ++ Sbjct: 123 DHWETWRQIHQATINNNLSPHFLALCQSSGYPPDFPNAPRRKNATRETTSILKAWLNQHKKNPYPTKGEKIMLALITKMTLTQVSTWFANARRRLKKENKMTWTARTRHEDDIDETGDDDEDDDDEEDNENDDDISKSDSRFESELRKNDESFLSKSEKSDTSADETSKSNKIWSIAEI 301
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Planmine SMEST
Match: SMESG000026100.1 (SMESG000026100.1) HSP 1 Score: 126.716 bits (317), Expect = 3.357e-33 Identity = 65/118 (55.08%), Postives = 85/118 (72.03%), Query Frame = 3 Query: 471 PITLAHLHTINHAD----VNQIQVKKNATRENSSTLKAWLQEHKDNPYPSKGEKILLAILTQMSLTQVSTWFANARRRLKKENKIGWIANGKS-DNPDSTSDSELSELFTREYEKPNS 809 P++ LH NH++ +N +KNATRE +S LKAWL EHK NPYP+KGEKI+LA++T+M+LTQVSTWFANARRRLKKENK+ W N KS D D D++ S++ +R + P S Sbjct: 108 PMSSRVLHVPNHSENFMEMNSHPRRKNATRETTSILKAWLNEHKKNPYPTKGEKIMLAVITKMTLTQVSTWFANARRRLKKENKMTWSPNQKSEDEADDLEDTDSSDIRSRLQDDPAS 225 The following BLAST results are available for this feature:
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Iroquois-class homeodomain protein IRX-6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30007957 ID=SMED30007957|Name=Iroquois-class homeodomain protein IRX-6|organism=Schmidtea mediterranea sexual|type=transcript|length=1028bpback to top protein sequence of SMED30007957-orf-1 >SMED30007957-orf-1 ID=SMED30007957-orf-1|Name=SMED30007957-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=261bp MEKPNCCLDPKMCLPFRLLDCVQTQATGYKYNVLFVKQNGNLMNCLKNHEback to top Annotated Terms
The following terms have been associated with this transcript:
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