Nuclear hormone receptor HR96
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30007841 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 21Note: Hover over icons to view figure legend
Homology
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Human
Match: NR1I3 (nuclear receptor subfamily 1 group I member 3 [Source:HGNC Symbol;Acc:HGNC:7969]) HSP 1 Score: 87.0409 bits (214), Expect = 5.357e-20 Identity = 39/76 (51.32%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 259 ELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE 486 EL N C VCGD+A GY+F A+TCE CK FFRR K P C F +CE+S RR C CRL KC M+K+ Sbjct: 7 ELRN---CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKD 79
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Human
Match: NR1I3 (nuclear receptor subfamily 1 group I member 3 [Source:HGNC Symbol;Acc:HGNC:7969]) HSP 1 Score: 87.0409 bits (214), Expect = 5.357e-20 Identity = 39/76 (51.32%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 259 ELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE 486 EL N C VCGD+A GY+F A+TCE CK FFRR K P C F +CE+S RR C CRL KC M+K+ Sbjct: 7 ELRN---CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKD 79
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Human
Match: VDR (vitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]) HSP 1 Score: 84.7297 bits (208), Expect = 2.706e-19 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCGD+A G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ Sbjct: 22 RICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFIL 95
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Human
Match: VDR (vitamin D receptor [Source:HGNC Symbol;Acc:HGNC:12679]) HSP 1 Score: 84.7297 bits (208), Expect = 3.079e-19 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCGD+A G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ Sbjct: 22 RICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFIL 95
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Human
Match: NR1I3 (nuclear receptor subfamily 1 group I member 3 [Source:HGNC Symbol;Acc:HGNC:7969]) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-18 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 C VCGD+A GY+F A+TCE CK FFRR K P C F +CE+S RR C CRL KC M+K+ I+ Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMIL 82
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Celegans
Match: nhr-48 (Nuclear hormone receptor family member nhr-48 [Source:UniProtKB/Swiss-Prot;Acc:Q94407]) HSP 1 Score: 106.686 bits (265), Expect = 5.770e-24 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 K+C VCGDKA YNF ITCESCKAFFRRNA+K+ C FN+ CEI++ +RRFC CRL KCF + MKKE I+ Sbjct: 98 KVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIM 171
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Celegans
Match: nhr-48 (Nuclear hormone receptor family member nhr-48 [Source:UniProtKB/Swiss-Prot;Acc:Q94407]) HSP 1 Score: 106.686 bits (265), Expect = 5.770e-24 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 K+C VCGDKA YNF ITCESCKAFFRRNA+K+ C FN+ CEI++ +RRFC CRL KCF + MKKE I+ Sbjct: 98 KVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIM 171
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Celegans
Match: nhr-48 (Nuclear hormone receptor family member nhr-48 [Source:UniProtKB/Swiss-Prot;Acc:Q94407]) HSP 1 Score: 98.9821 bits (245), Expect = 1.687e-21 Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKK 483 K+C VCGDKA YNF ITCESCKAFFRRNA+K+ C FN+ CEI++ +RRFC CRL KCF + + + Sbjct: 98 KVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFAVSLAE 167
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Celegans
Match: daf-12 (Nuclear hormone receptor family member daf-12 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF5]) HSP 1 Score: 97.8265 bits (242), Expect = 3.640e-21 Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRK 516 K C VCGD A GYNF ITCESCKAFFRRNA + C +++ CEI+ +RRFC CRL KCF + MKKE I+ R+ Sbjct: 82 KTCRVCGDHATGYNFNVITCESCKAFFRRNALRPKEFKCPYSEDCEINSVSRRFCQKCRLRKCFTVGMKKEWILNEEQLRR 162
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Celegans
Match: daf-12 (Nuclear hormone receptor family member daf-12 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF5]) HSP 1 Score: 97.8265 bits (242), Expect = 3.802e-21 Identity = 46/85 (54.12%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKS 528 K C VCGD A GYNF ITCESCKAFFRRNA + C +++ CEI+ +RRFC CRL KCF + MKKE I+ R+ S Sbjct: 116 KTCRVCGDHATGYNFNVITCESCKAFFRRNALRPKEFKCPYSEDCEINSVSRRFCQKCRLRKCFTVGMKKEWILNEEQLRRRKNS 200
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Fly
Match: Hr96 (gene:FBgn0015240 transcript:FBtr0084756) HSP 1 Score: 113.235 bits (282), Expect = 4.704e-26 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 262 LTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNK 510 ++ K C+VCGDKALGYNF A+TCESCKAFFRRNA K C FN+ C+I+V TRRFC CRL KC + MK ENI+ +K Sbjct: 1 MSPPKNCAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDK 83 HSP 2 Score: 94.3597 bits (233), Expect = 5.611e-20 Identity = 53/196 (27.04%), Postives = 107/196 (54.59%), Query Frame = 1 Query: 970 LINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQ-----GEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNM 1542 L+ LIN + +++LI AK ++ F + Q Q+ALLKG +I+RS + Y+ D+ W P G I ++++K A + E++ ++ +F + DE +I I + LF+S + + + + Y LL+ YLES + ++R+ F+ ++ + D++ L + L+++P+ ++PL+ E+F++ Sbjct: 526 LLQLINLTAVAIKRLIKMAKKITAFRDMCQEDQVALLKGGCTEMMIMRSVMIYDDDRAAWKVPHTKENMGNIRTDLLKFAE-GNIYEEHQKFITTFDEKWRMDENIILIMCAIVLFTSARSRVIHKDVIRLEQNSYYYLLRRYLESVYSGCEARNAFIKLIQKISDVERLNKFIINVYLNVNPSQVEPLLREIFDL 720
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Fly
Match: EcR (gene:FBgn0000546 transcript:FBtr0086012) HSP 1 Score: 85.1149 bits (209), Expect = 4.799e-17 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTN------KRKYDKSSDKVT 543 ++C VCGD+A GY++ A+TCE CK FFRR+ K + C F + CE+ + RR C CRL KC + M+ E ++ ++K K DK+T Sbjct: 53 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMT 148
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Fly
Match: EcR (gene:FBgn0000546 transcript:FBtr0302439) HSP 1 Score: 85.1149 bits (209), Expect = 5.363e-17 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTN------KRKYDKSSDKVT 543 ++C VCGD+A GY++ A+TCE CK FFRR+ K + C F + CE+ + RR C CRL KC + M+ E ++ ++K K DK+T Sbjct: 262 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMT 357
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Fly
Match: EcR (gene:FBgn0000546 transcript:FBtr0086011) HSP 1 Score: 85.1149 bits (209), Expect = 5.363e-17 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTN------KRKYDKSSDKVT 543 ++C VCGD+A GY++ A+TCE CK FFRR+ K + C F + CE+ + RR C CRL KC + M+ E ++ ++K K DK+T Sbjct: 262 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMT 357
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Fly
Match: EcR (gene:FBgn0000546 transcript:FBtr0086010) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-17 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTN------KRKYDKSSDKVT 543 ++C VCGD+A GY++ A+TCE CK FFRR+ K + C F + CE+ + RR C CRL KC + M+ E ++ ++K K DK+T Sbjct: 233 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMT 328
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Zebrafish
Match: vdrb (vitamin D receptor b [Source:NCBI gene;Acc:564511]) HSP 1 Score: 130.954 bits (328), Expect = 7.427e-33 Identity = 117/446 (26.23%), Postives = 202/446 (45.29%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESG-SMSPSAIED-----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + S E R+I ++ + K+ D+S F + F+P V S S+ + L S++D S + + + E D + + + + E G S SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W E +++ K EL E ++ KKL + +E+++ + +CL S D + D V + DK +L+ Y+ + H R ++ ++ L DL+ L +H + L P + + PL+LEVF ++ Sbjct: 21 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFIL----------TDEEVQRKKELIQRRKDEEAHREAQKPRLSDEQRNIIDTLVD---AHHKTYDDSYSDF-----------------------SRFRPPVREGPVTRSASRAASLHSLSDA-SSDSFSH--SPESGDRKMNL-SNLLMMYQEQGLSSSPDSKEEDGSSLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPEFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHVRVEALQDKVSEVLQAYIRAHHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGGQVT 422
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Zebrafish
Match: vdrb (vitamin D receptor b [Source:NCBI gene;Acc:564511]) HSP 1 Score: 130.954 bits (328), Expect = 7.427e-33 Identity = 117/446 (26.23%), Postives = 202/446 (45.29%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESG-SMSPSAIED-----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + S E R+I ++ + K+ D+S F + F+P V S S+ + L S++D S + + + E D + + + + E G S SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W E +++ K EL E ++ KKL + +E+++ + +CL S D + D V + DK +L+ Y+ + H R ++ ++ L DL+ L +H + L P + + PL+LEVF ++ Sbjct: 21 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFIL----------TDEEVQRKKELIQRRKDEEAHREAQKPRLSDEQRNIIDTLVD---AHHKTYDDSYSDF-----------------------SRFRPPVREGPVTRSASRAASLHSLSDA-SSDSFSH--SPESGDRKMNL-SNLLMMYQEQGLSSSPDSKEEDGSSLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPEFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHVRVEALQDKVSEVLQAYIRAHHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGGQVT 422
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Zebrafish
Match: vdrb (vitamin D receptor b [Source:NCBI gene;Acc:564511]) HSP 1 Score: 130.954 bits (328), Expect = 8.444e-33 Identity = 117/446 (26.23%), Postives = 202/446 (45.29%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESG-SMSPSAIED-----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + S E R+I ++ + K+ D+S F + F+P V S S+ + L S++D S + + + E D + + + + E G S SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W E +++ K EL E ++ KKL + +E+++ + +CL S D + D V + DK +L+ Y+ + H R ++ ++ L DL+ L +H + L P + + PL+LEVF ++ Sbjct: 23 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFIL----------TDEEVQRKKELIQRRKDEEAHREAQKPRLSDEQRNIIDTLVD---AHHKTYDDSYSDF-----------------------SRFRPPVREGPVTRSASRAASLHSLSDA-SSDSFSH--SPESGDRKMNL-SNLLMMYQEQGLSSSPDSKEEDGSSLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPEFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHVRVEALQDKVSEVLQAYIRAHHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGGQVT 424
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Zebrafish
Match: nr1i2 (nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]) HSP 1 Score: 111.694 bits (278), Expect = 4.426e-26 Identity = 102/429 (23.78%), Postives = 186/429 (43.36%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFP-SQKKETIVPNVPNVNGHII-HNSNSFKPT-VIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVW-VTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHID--PTNIDPLMLEVFN 1539 KIC VCGDK+ GY+F A+TCE CK FFRR + + C F C I+ + RR C CRL KC + M KR+ S + V + + + V+ + ++ +N++ D T + Q P + ++++ ++P NG I H + P + + + S S L +E F+SGS + +L + + + ++++ +INF K L+ F L QI+LLKGA +++ + +N +W P + + + L + + + +KL + +EY+ + Q L LFS D +TD + + + + LK Y+E+ + +F I+ L +++ + ++ + +L I + PL LE+ + Sbjct: 44 KICQVCGDKSTGYHFNAMTCEGCKGFFRRAMKRPAQLCCPFQSACVITKSNRRQCQSCRLQKCLSIGM----------KRELIMSDEAVEKRRLQIRRKRMQEEPVTLTPQQEAVIQELLNAHKKTFDMTCAHFS----QFRPLDRGQKSVSESIPVTNGSWIDHRPIAEDPVQWVFNSTSLSSSSSSCQSLDKE----------------------KKHFKSGSFT-------SLPHFTDLTTYMIKNVINFGKTLTMFRALVMEDQISLLKGATFEIILIHFNMFFNEVTGIWECGPLQYCMDDAFRAGFQHHLLDPMMNFHYTLRKLRLHEEEYV--LMQALSLFSPDRPGVTDHKVIDRNQETLALTLKTYIEAKRNGPEKNLLFPKIMGCLTEMRSMNEEYTKQVLKIQDMQPEVSPLWLEIIS 427
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Zebrafish
Match: nr1i2 (nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]) HSP 1 Score: 111.694 bits (278), Expect = 4.426e-26 Identity = 102/429 (23.78%), Postives = 186/429 (43.36%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFP-SQKKETIVPNVPNVNGHII-HNSNSFKPT-VIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVW-VTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHID--PTNIDPLMLEVFN 1539 KIC VCGDK+ GY+F A+TCE CK FFRR + + C F C I+ + RR C CRL KC + M KR+ S + V + + + V+ + ++ +N++ D T + Q P + ++++ ++P NG I H + P + + + S S L +E F+SGS + +L + + + ++++ +INF K L+ F L QI+LLKGA +++ + +N +W P + + + L + + + +KL + +EY+ + Q L LFS D +TD + + + + LK Y+E+ + +F I+ L +++ + ++ + +L I + PL LE+ + Sbjct: 44 KICQVCGDKSTGYHFNAMTCEGCKGFFRRAMKRPAQLCCPFQSACVITKSNRRQCQSCRLQKCLSIGM----------KRELIMSDEAVEKRRLQIRRKRMQEEPVTLTPQQEAVIQELLNAHKKTFDMTCAHFS----QFRPLDRGQKSVSESIPVTNGSWIDHRPIAEDPVQWVFNSTSLSSSSSSCQSLDKE----------------------KKHFKSGSFT-------SLPHFTDLTTYMIKNVINFGKTLTMFRALVMEDQISLLKGATFEIILIHFNMFFNEVTGIWECGPLQYCMDDAFRAGFQHHLLDPMMNFHYTLRKLRLHEEEYV--LMQALSLFSPDRPGVTDHKVIDRNQETLALTLKTYIEAKRNGPEKNLLFPKIMGCLTEMRSMNEEYTKQVLKIQDMQPEVSPLWLEIIS 427
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Xenopus
Match: VDR (vitamin D receptor [Source:NCBI gene;Acc:100491661]) HSP 1 Score: 137.502 bits (345), Expect = 4.361e-35 Identity = 111/435 (25.52%), Postives = 191/435 (43.91%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEI--IKTAGL-YELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHID-----PTNIDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ + ++V K ++ + S S E + + ++ +T + F +E + + + + S+ S+ S + + + S G F + FE SM A + + L +L + + ++K+I FAK + F L QIALLK +V+ ++LRS +++D W + ++ + AG EL E ++ KKL + +E+++ + +C+ S D + D+ V I D+ L+ Y+ H SR ++ ++ L DL+ L +H + I + PL+LEVF +S Sbjct: 18 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAVFTCPFNGDCRITKDNRRHCQSCRLKRCVDIGMMKEFIL----------TDEEVQRKREMITKRKEEEALKESMRPKMSEEQQKMIDVLVDAHRKTFDTTYSDFGQFRPPVRENVCKRITRSSSILTQGSS----------SEDSDVFTSSPDCSEHG--------------FFSAGSLFGHFEHSSMDGKAGDLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLIAEDQIALLKSSVIEVIMLRSNQSFSLDDMSWTCGSEDFKYKVDDVTQAGHNMELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICILSPDRPGVQDKALVESIQDRLSATLQTYILCKHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRSISFLPEHSMQLTPLVLEVFGNEIS 416
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Xenopus
Match: VDR (vitamin D receptor [Source:NCBI gene;Acc:100491661]) HSP 1 Score: 137.502 bits (345), Expect = 4.805e-35 Identity = 111/435 (25.52%), Postives = 191/435 (43.91%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEI--IKTAGL-YELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHID-----PTNIDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ + ++V K ++ + S S E + + ++ +T + F +E + + + + S+ S+ S + + + S G F + FE SM A + + L +L + + ++K+I FAK + F L QIALLK +V+ ++LRS +++D W + ++ + AG EL E ++ KKL + +E+++ + +C+ S D + D+ V I D+ L+ Y+ H SR ++ ++ L DL+ L +H + I + PL+LEVF +S Sbjct: 22 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAVFTCPFNGDCRITKDNRRHCQSCRLKRCVDIGMMKEFIL----------TDEEVQRKREMITKRKEEEALKESMRPKMSEEQQKMIDVLVDAHRKTFDTTYSDFGQFRPPVRENVCKRITRSSSILTQGSS----------SEDSDVFTSSPDCSEHG--------------FFSAGSLFGHFEHSSMDGKAGDLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLIAEDQIALLKSSVIEVIMLRSNQSFSLDDMSWTCGSEDFKYKVDDVTQAGHNMELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICILSPDRPGVQDKALVESIQDRLSATLQTYILCKHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRSISFLPEHSMQLTPLVLEVFGNEIS 420
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Xenopus
Match: nr1i2 (nuclear receptor subfamily 1 group I member 2 [Source:NCBI gene;Acc:100038168]) HSP 1 Score: 84.3445 bits (207), Expect = 5.410e-17 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 KIC CGD+A GY+F A+TCE CK FFRR +K C F +C I+ + RR C CRL KC + M+KE I+ Sbjct: 35 KICRACGDRATGYHFNAMTCEGCKGFFRRAMKRKLQLSCPFQNSCVINKSNRRHCQACRLKKCLDIGMRKELIM 108 HSP 2 Score: 57.3806 bits (137), Expect = 3.354e-8 Identity = 52/186 (27.96%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 997 FLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYEL-QEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGF-IDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNID--PLMLEVFN 1539 ++++ +I+FAK L F L QIALLKG+V+ ++R + + N W ++E + AG +L E R R +KL + ++EY + LF+SD + D + + ++ + ++LK Y+E +R ++ I+ L +L+ + H + LL I D PL+ EVF Sbjct: 204 YMIKGVISFAKMLPYFKSLNIEDQIALLKGSVVEVCVIRFNTMFVPETNSWECGPITYNTEDMTMAGFRQLFLEPLLRMHRMMRKLNLHNEEYALMAAMA--LFASDRPGVQDCKKIQNLQEHIALMLKRYIECQRPLSPQNRLLYPKIMECLTELRTVNDIHSKQLLEIWDIQPDATPLLREVFG 387
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Xenopus
Match: nr1i2 (nuclear receptor subfamily 1 group I member 2 [Source:NCBI gene;Acc:100038168]) HSP 1 Score: 83.9593 bits (206), Expect = 5.993e-17 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 KIC CGD+A GY+F A+TCE CK FFRR +K C F +C I+ + RR C CRL KC + M+KE I+ Sbjct: 23 KICRACGDRATGYHFNAMTCEGCKGFFRRAMKRKLQLSCPFQNSCVINKSNRRHCQACRLKKCLDIGMRKELIM 96 HSP 2 Score: 57.3806 bits (137), Expect = 2.725e-8 Identity = 52/186 (27.96%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 997 FLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYEL-QEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGF-IDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNID--PLMLEVFN 1539 ++++ +I+FAK L F L QIALLKG+V+ ++R + + N W ++E + AG +L E R R +KL + ++EY + LF+SD + D + + ++ + ++LK Y+E +R ++ I+ L +L+ + H + LL I D PL+ EVF Sbjct: 192 YMIKGVISFAKMLPYFKSLNIEDQIALLKGSVVEVCVIRFNTMFVPETNSWECGPITYNTEDMTMAGFRQLFLEPLLRMHRMMRKLNLHNEEYALMAAMA--LFASDRPGVQDCKKIQNLQEHIALMLKRYIECQRPLSPQNRLLYPKIMECLTELRTVNDIHSKQLLEIWDIQPDATPLLREVFG 375
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Xenopus
Match: HNF4A (hepatocyte nuclear factor 4 alpha [Source:NCBI gene;Acc:100492541]) HSP 1 Score: 83.5741 bits (205), Expect = 1.159e-16 Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 217 YFTNLIISDLCEIKELTNVKI---CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSS 531 Y+T SD+ + ++ + C++CGD+A G ++GA +C+ CK FFRR+ K C F++ C + + R C YCRL KCF+ MKKE + ++ +SS Sbjct: 3 YYTYTSPSDVTSLNATNSIGVNSLCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSS 110
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Mouse
Match: Nr1i3 (nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]) HSP 1 Score: 87.4261 bits (215), Expect = 3.255e-18 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 C VCGD+A GY+F A+TCE CK FFRR K P C F CE+S RR C CRL KC + M+K+ I+ Sbjct: 21 CVVCGDRATGYHFHALTCEGCKGFFRRTVSKTIGPICPFAGRCEVSKAQRRHCPACRLQKCLNVGMRKDMIL 92
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Mouse
Match: Nr1i3 (nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]) HSP 1 Score: 87.4261 bits (215), Expect = 3.290e-18 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 C VCGD+A GY+F A+TCE CK FFRR K P C F CE+S RR C CRL KC + M+K+ I+ Sbjct: 21 CVVCGDRATGYHFHALTCEGCKGFFRRTVSKTIGPICPFAGRCEVSKAQRRHCPACRLQKCLNVGMRKDMIL 92
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Mouse
Match: Nr1i3 (nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]) HSP 1 Score: 85.5001 bits (210), Expect = 5.545e-18 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 C VCGD+A GY+F A+TCE CK FFRR K P C F CE+S RR C CRL KC + M+K+ I+ Sbjct: 21 CVVCGDRATGYHFHALTCEGCKGFFRRTVSKTIGPICPFAGRCEVSKAQRRHCPACRLQKCLNVGMRKDMIL 92
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Mouse
Match: Vdr (vitamin D (1,25-dihydroxyvitamin D3) receptor [Source:MGI Symbol;Acc:MGI:103076]) HSP 1 Score: 87.4261 bits (215), Expect = 5.550e-18 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCGD+A G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ Sbjct: 22 RICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFIL 95 HSP 2 Score: 72.0182 bits (175), Expect = 4.956e-13 Identity = 62/220 (28.18%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 928 ESGSMSPSAIEDAN----LINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEI--IKTAG-LYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 E GS PS D + L +L + + ++K+I FAK + F L QI LLK + + ++LRS + +D W + +I + AG EL E ++ KKL +E + + I C+ S D + D + V I D+ L+ Y+ H S ++ ++ L DL+ L +H + L P N + PL+LEVF +S Sbjct: 204 EEGSDDPSVTLDLSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTLDDMSWDCGSQDYKYDITDVSRAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAI-CIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGNEIS 422
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Mouse
Match: Nr1i2 (nuclear receptor subfamily 1, group I, member 2 [Source:MGI Symbol;Acc:MGI:1337040]) HSP 1 Score: 86.2705 bits (212), Expect = 1.443e-17 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 256 KELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNK-TCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +E ++IC VCGDKA GY+F +TCE CK FFRR + C F K TCEI+ TRR C CRL KC + MKKE I+ Sbjct: 30 EEDGGLQICRVCGDKANGYHFNVMTCEGCKGFFRRAMKRNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIM 110 HSP 2 Score: 75.0998 bits (183), Expect = 6.281e-14 Identity = 55/195 (28.21%), Postives = 100/195 (51.28%), Query Frame = 1 Query: 970 LINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYE--LQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTN--IDPLMLEVFN 1539 L +L + S ++ + +INFAK +S F L QI+LLKGA ILR ++ + W G ++ G ++ L + ++ KKL + +EY++ Q + LFS D + R V + +++ + LK Y+E + + R +F+ I++ L +L+ + ++ Q LL I ++ PLM E+F+ Sbjct: 237 LPHLADVSTYMFKGVINFAKVISYFRDLPIEDQISLLKGATFEMCILRFNTMFDTETGTWEC--GRLAYCFEDPNGGFQKLLLDPLMKFHCMLKKLQLHKEEYVL--MQAISLFSPDRPGVVQRSVVDQLQERFALTLKAYIECSRPYPAHRFLFLKIMAVLTELRSINAQQTQQLLRIQDSHPFATPLMQELFS 427
BLAST of Nuclear hormone receptor HR96 vs. UniProt/SwissProt
Match: sp|O13124|VDR_XENLA (Vitamin D3 receptor OS=Xenopus laevis OX=8355 GN=vdr PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.188e-33 Identity = 114/431 (26.45%), Postives = 188/431 (43.62%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEI--IKTAGL-YELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHID-----PTNIDPLMLEVFN 1539 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ + ++V K ++ + S S E + + + +T + F +E + P +H S S+ S + + + S G F S F E SM + E + L ++ + + ++K+I FAK + F L QIALLK +V+ ++LRS +++D W + ++ + AG EL E ++ KKL + +E+++ + +C+ S D L D+ V I D+ L+ Y+ H SR ++ ++ L DL+ L +H + I + PLMLEVF+ Sbjct: 23 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCRITKDNRRHCQSCRLKRCVDIGMMKEFIL----------TDEEVQRKRQMINKRKSEEALKESMRPKISDEQQKMIDILLEAHRKTFDTTYSDFNKFRPPVRENVDPFRRITRSSSVHTQG--------SPSEDSDVFTSSPDSSEHG--------------FFSASLFGQF-EYSSMGGKSGELSMLPHIADLVSYSIQKIIGFAKMIPGFRDLIAEDQIALLKSSVIEVIMLRSNQSFSLDDMSWTCGSEDFKYKVDDVTQAGHNMELLEPLVKFQVGLKKLDLHEEEHVLLMA--ICILSPDRPGLQDKALVESIQDRLSSTLQTYILCKHPPPGSRLLYAKMIQKLADLRSLNEEHSKQYRSISFLPEHSMKLTPLMLEVFS 418
BLAST of Nuclear hormone receptor HR96 vs. UniProt/SwissProt
Match: sp|Q1L673|VDRB_DANRE (Vitamin D3 receptor B OS=Danio rerio OX=7955 GN=vdrb PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.607e-32 Identity = 117/446 (26.23%), Postives = 202/446 (45.29%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESG-SMSPSAIED-----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + S E R+I ++ + K+ D+S F + F+P V S S+ + L S++D S + + + E D + + + + E G S SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W E +++ K EL E ++ KKL + +E+++ + +CL S D + D V + DK +L+ Y+ + H R ++ ++ L DL+ L +H + L P + + PL+LEVF ++ Sbjct: 21 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFIL----------TDEEVQRKKELIQRRKDEEAHREAQKPRLSDEQRNIIDTLVD---AHHKTYDDSYSDF-----------------------SRFRPPVREGPVTRSASRAASLHSLSDA-SSDSFSH--SPESGDRKMNL-SNLLMMYQEQGLSSSPDSKEEDGSSLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPEFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHVRVEALQDKVSEVLQAYIRAHHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGGQVT 422
BLAST of Nuclear hormone receptor HR96 vs. UniProt/SwissProt
Match: sp|Q24143|HR96_DROME (Nuclear hormone receptor HR96 OS=Drosophila melanogaster OX=7227 GN=Hr96 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.716e-25 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 262 LTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNK 510 ++ K C+VCGDKALGYNF A+TCESCKAFFRRNA K C FN+ C+I+V TRRFC CRL KC + MK ENI+ +K Sbjct: 1 MSPPKNCAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDK 83 HSP 2 Score: 94.3597 bits (233), Expect = 5.625e-19 Identity = 53/196 (27.04%), Postives = 107/196 (54.59%), Query Frame = 1 Query: 970 LINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQ-----GEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNM 1542 L+ LIN + +++LI AK ++ F + Q Q+ALLKG +I+RS + Y+ D+ W P G I ++++K A + E++ ++ +F + DE +I I + LF+S + + + + Y LL+ YLES + ++R+ F+ ++ + D++ L + L+++P+ ++PL+ E+F++ Sbjct: 526 LLQLINLTAVAIKRLIKMAKKITAFRDMCQEDQVALLKGGCTEMMIMRSVMIYDDDRAAWKVPHTKENMGNIRTDLLKFAE-GNIYEEHQKFITTFDEKWRMDENIILIMCAIVLFTSARSRVIHKDVIRLEQNSYYYLLRRYLESVYSGCEARNAFIKLIQKISDVERLNKFIINVYLNVNPSQVEPLLREIFDL 720
BLAST of Nuclear hormone receptor HR96 vs. UniProt/SwissProt
Match: sp|Q94407|NHR48_CAEEL (Nuclear hormone receptor family member nhr-48 OS=Caenorhabditis elegans OX=6239 GN=nhr-48 PE=2 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 7.339e-23 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 K+C VCGDKA YNF ITCESCKAFFRRNA+K+ C FN+ CEI++ +RRFC CRL KCF + MKKE I+ Sbjct: 98 KVCRVCGDKAFSYNFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIM 171
BLAST of Nuclear hormone receptor HR96 vs. UniProt/SwissProt
Match: sp|G5EFF5|DAF12_CAEEL (Nuclear hormone receptor family member daf-12 OS=Caenorhabditis elegans OX=6239 GN=daf-12 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.836e-20 Identity = 46/85 (54.12%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKS 528 K C VCGD A GYNF ITCESCKAFFRRNA + C +++ CEI+ +RRFC CRL KCF + MKKE I+ R+ S Sbjct: 116 KTCRVCGDHATGYNFNVITCESCKAFFRRNALRPKEFKCPYSEDCEINSVSRRFCQKCRLRKCFTVGMKKEWILNEEQLRRRKNS 200
BLAST of Nuclear hormone receptor HR96 vs. TrEMBL
Match: A0A267FPS2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig025213g3 PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 1.135e-90 Identity = 176/449 (39.20%), Postives = 264/449 (58.80%), Query Frame = 1 Query: 265 TNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE-----NIIGHTN--KRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPN------VNGHI--IHNSNSFKPTVIMS--VSKKSKLISI----NDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFE-SGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKT-AGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNM 1542 TN K+C++CGDKALGYNF AI+CESCKAFFRRNA K P C+F++ C ++V TRRFCT CRL KC + M+ E + G + +R+ D D T K+ S +++ + S + + D +++ D+ Q+ + +PN N ++G + +H +P + + + +L+ + + L+ G R L+ E+W + + ++Y +F + S +P+ D N NL+NSSGF+V+KLI FAK L DF L Q CQIALLKG V+ +L LRSAV Y+ D++VW+TP+GE+ + I+K G EL +D+ R+CR FK L+ D YL+ I Q+L LF+ D S+ DR VS++ D+YI LLKHYLE F ++R I+ L DLQ L +HG++LLH++P +DPL+LEVF++ Sbjct: 47 TNGKVCTICGDKALGYNFDAISCESCKAFFRRNALKAEIPDCMFSQRCNVTVATRRFCTSCRLKKCLECGMRPELVNADELRGRKSLLRRRIDLPDDTSTLKSSPLSSVTKPLVSLATGPPLKL--EASEADDLLADSSSS--PADHPQQL---PQPPLSLPNFANSVSSNSLHGQVESMHMRVGRQPVIASAPPLHNPDQLLVLSAGSDASLTVPGGRRCLSHEQWLAVADLKQAYEQSFSDASDDTTPAGCRDVN--NLVNSSGFIVKKLILFAKKLPDFVSLSQPCQIALLKGVVICTLFLRSAVHYHRDRDVWLTPKGEVPTAILKEIPGFAELYDDHLRFCRQFK-LLFQDPYLVPIVQVLLLFTPDRPSVGDRTLVSNVQDRYICLLKHYLEGRTSFTEARRKLPKILLLLEDLQDLAERHGRLLLHVNPAEVDPLLLEVFDI 485
BLAST of Nuclear hormone receptor HR96 vs. TrEMBL
Match: A0A267GAD8 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig025213g2 PE=3 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.250e-90 Identity = 176/449 (39.20%), Postives = 264/449 (58.80%), Query Frame = 1 Query: 265 TNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE-----NIIGHTN--KRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPN------VNGHI--IHNSNSFKPTVIMS--VSKKSKLISI----NDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFE-SGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKT-AGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNM 1542 TN K+C++CGDKALGYNF AI+CESCKAFFRRNA K P C+F++ C ++V TRRFCT CRL KC + M+ E + G + +R+ D D T K+ S +++ + S + + D +++ D+ Q+ + +PN N ++G + +H +P + + + +L+ + + L+ G R L+ E+W + + ++Y +F + S +P+ D N NL+NSSGF+V+KLI FAK L DF L Q CQIALLKG V+ +L LRSAV Y+ D++VW+TP+GE+ + I+K G EL +D+ R+CR FK L+ D YL+ I Q+L LF+ D S+ DR VS++ D+YI LLKHYLE F ++R I+ L DLQ L +HG++LLH++P +DPL+LEVF++ Sbjct: 47 TNGKVCTICGDKALGYNFDAISCESCKAFFRRNALKAEIPDCMFSQRCNVTVATRRFCTSCRLKKCLECGMRPELVNADELRGRKSLLRRRIDLPDDTSTLKSSPLSSVTKPLVSLATGPPLKL--EASEADDLLADSSSS--PADHPQQL---PQPPLSLPNFANSVSSNSLHGQVESMHMRVGRQPVIASAPPLHNPDQLLVLSAGSDASLTVPGGRRCLSHEQWLAVADLKQAYEQSFSDASDDTTPAGCRDVN--NLVNSSGFIVKKLILFAKKLPDFVSLSQPCQIALLKGVVICTLFLRSAVHYHRDRDVWLTPKGEVPTAILKEIPGFAELYDDHLRFCRQFK-LLFQDPYLVPIVQVLLLFTPDRPSVGDRTLVSNVQDRYICLLKHYLEGRTSFTEARRKLPKILLLLEDLQDLAERHGRLLLHVNPAEVDPLLLEVFDI 485
BLAST of Nuclear hormone receptor HR96 vs. TrEMBL
Match: A0A267E6Y8 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig025213g1 PE=3 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.421e-90 Identity = 176/449 (39.20%), Postives = 264/449 (58.80%), Query Frame = 1 Query: 265 TNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE-----NIIGHTN--KRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPN------VNGHI--IHNSNSFKPTVIMS--VSKKSKLISI----NDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFE-SGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKT-AGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNM 1542 TN K+C++CGDKALGYNF AI+CESCKAFFRRNA K P C+F++ C ++V TRRFCT CRL KC + M+ E + G + +R+ D D T K+ S +++ + S + + D +++ D+ Q+ + +PN N ++G + +H +P + + + +L+ + + L+ G R L+ E+W + + ++Y +F + S +P+ D N NL+NSSGF+V+KLI FAK L DF L Q CQIALLKG V+ +L LRSAV Y+ D++VW+TP+GE+ + I+K G EL +D+ R+CR FK L+ D YL+ I Q+L LF+ D S+ DR VS++ D+YI LLKHYLE F ++R I+ L DLQ L +HG++LLH++P +DPL+LEVF++ Sbjct: 47 TNGKVCTICGDKALGYNFDAISCESCKAFFRRNALKAEIPDCMFSQRCNVTVATRRFCTSCRLKKCLECGMRPELVNADELRGRKSLLRRRIDLPDDTSTLKSSPLSSVTKPLVSLATGPPLKL--EASEADDLLADSSSS--PADHPQQL---PQPPLSLPNFANSVSSNSLHGQVESMHMRVGRQPVIASAPPLHNPDQLLVLSAGSDASLTVPGGRRCLSHEQWLAVADLKQAYEQSFSDASDDTTPAGCRDVN--NLVNSSGFIVKKLILFAKKLPDFVGLSQPCQIALLKGVVICTLFLRSAVHYHRDRDVWLTPKGEVPTAILKEIPGFAELYDDHLRFCRQFK-LLFQDPYLVPIVQVLLLFTPDRPSVGDRTLVSNVQDRYICLLKHYLEGRTSFTEARRKLPKILLLLEDLQDLAERHGRLLLHVNPAEVDPLLLEVFDI 485
BLAST of Nuclear hormone receptor HR96 vs. TrEMBL
Match: A0A1S3I681 (nuclear hormone receptor HR96 isoform X1 OS=Lingula unguis OX=7574 GN=LOC106160754 PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 2.070e-81 Identity = 159/429 (37.06%), Postives = 240/429 (55.94%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI--IGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIK-TAG--LYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNMN 1545 K+C VCGD ALGYNF AITCESCKAFFRRNA K+ CVF C+I VNTRRFC+YCRL KCF + M+K+ I + TN K + +D I D+ + + +Q KK+ ++P V + +S ++S+ S D+ S R L+++E L + +Y D + P E L NL+NS+G ++R+LI FAK + DF L Q QI LLKG +NS+ +RSA Y+ K+ WV+P+G +S+ I+K TAG L QED+ + CR FKKL+G+D ++ I Q++ LFS + +SLT+R +S+I D+Y+ LLKHY E+ + ++R M+ ++S L +++ T +HG++LLH++ I+P++LE+F++ Sbjct: 53 KVCGVCGDSALGYNFDAITCESCKAFFRRNAFKEKELKCVFEMKCKIDVNTRRFCSYCRLQKCFAIGMRKDMILVVKPTNAAKGGGMVCQKSD---------------------------------IKDEGEKKRRMEKLVQT--RDKKKVPKTDIP-VTQIKMEEPSSTSTCRLLSIPPPSSFA--QDQTSN---TRCLSDDELAFLTTLQANY-DMSLGIVADEPLEEEYKTLDNLVNSTGRIIRRLITFAKKIVDFMTLSQETQIVLLKGTSINSIYIRSATLYDAVKDAWVSPRGVVSTSILKRTAGQILNRFQEDHVKICRKFKKLLGNDSTVLVILQVISLFSPEYVSLTNRAIISNIQDRYLTLLKHYFEAKFSYREARRMYPAVLSILDEMKMFTEEHGRVLLHVNVDEIEPILLEIFDIR 439
BLAST of Nuclear hormone receptor HR96 vs. TrEMBL
Match: A0A2C9JN11 (Nuclear hormone receptor 48 OS=Biomphalaria glabrata OX=6526 GN=106060579 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 5.498e-76 Identity = 157/431 (36.43%), Postives = 233/431 (54.06%), Query Frame = 1 Query: 259 ELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDA--NLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIK-TAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNM 1542 +L + K+C VCGDKALGYNF AITCESCKAFFRRNA K C+F C + + TRRFC CR+ KCF + M ++ I+ + ++K + S + ++ A E S +S+ I+ T TD+S+ E I P P H KP ++ K L+ N + + L+ EE L + +Y + M P + E +L+N S VRK+I F K L+DF +L Q QIA LK +V+ +++LRSA+ Y I+K+ W+TP+GEI S I+K + G + ++ YCR K + D ++ S+ Q L LF L+LT R++VS I DKY++LLKHY+ES + SR +V + L DL+ L+ +H +ILL ++P +++PLMLEV N+ Sbjct: 33 KLKDEKLCGVCGDKALGYNFNAITCESCKAFFRRNALKDKTMVCLFENKCVVDIRTRRFCPACRIKKCFHIGMNRDMILDDSERKK--RMSKVIENR--------------------AKREPTSTSSSEIHIKTEI--DTDDSMSC--EGNTELIRPPTPYGKSH------GDKPEILFKHIPKH-LLPAN-----KSMYYTLSLEESSLLKDLTHAYQETLAAMPEMGPYSEEKKYNRAADLVNHSEICVRKMILFVKYLADFKLLSQDDQIAALKASVMKTVLLRSALFYIIEKDAWITPKGEIPSSILKKSTGFVSVHNNHVYYCRRVKSMAQDDLHIYSLLQALILFDPAGLNLTSREYVSTIQDKYLILLKHYMESKFSYDYSREYYVSALDRLSDLRVLSEEHAKILLQVNPVDVEPLMLEVLNL 425
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Cavefish
Match: vdra (vitamin D receptor [Source:NCBI gene;Acc:103045919]) HSP 1 Score: 136.346 bits (342), Expect = 1.694e-34 Identity = 118/440 (26.82%), Postives = 202/440 (45.91%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDAN-----LINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + + S E I S + + K+ D+S F + P V + V S S+ + L S++D S + + E DT ++ S + + ++ G+ SP + ED N L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W + +++ K EL E ++ KKL M +E+++ + +CL S D + D + + D+ +L+ Y+ H R ++ ++ L DL+ L +H + L P + + PL+LEVF +S Sbjct: 71 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFIL----------TDEEVQRKKELILKRKEEEAAREAQKPRLSDEQTQIISTLVE---AHHKTYDDSYSDFARFR--------PPVR----------EGPVTRSASRAASLHSLSDASSD---SFNHSPESVDTK--LNFSSLLSMYQEGTGSPDSSEDDNSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCITDVTKAGHTLELLEPLVKFQVGLKKLNMHEEEHVLLMA--ICLLSPDRPGVQDHARIEALQDRLCEVLQAYIRINH--PGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS 470
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Cavefish
Match: rorb (RAR related orphan receptor B [Source:NCBI gene;Acc:103038205]) HSP 1 Score: 91.6633 bits (226), Expect = 2.661e-19 Identity = 105/470 (22.34%), Postives = 184/470 (39.15%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI-IGHTNKRKYDKSSDKVTD----------KNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTD-----------NSIQIFPSQ-----------KKETI--VPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARL-LTEEEWDTLFFIHKSYID-NFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNID----PLMLEVFNMNLSNVAKK 1566 C +CGDK+ G ++G ITCE CK FFRR+ + C + C I R C +CRL KC + M ++ + G +K++ D +V + + + + S Y N ++ +S Q P Q K+E I + VPN+ + + + P V M +L I + + L T EE L + SY + ++S S + I + ++ ++V FAK ++ F L Q+ QI LLK L +++R +N N + ++ K G +L + +S L ++E I++ L S+D L + + V + +K L+H ++ H D+ + + + L L L ++ Q + P ++ PL E+FN + + V K Sbjct: 14 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQQTGEAEALARVYSTGLSSGLGSLGHDLGSAYTNGHLIDMPKGQANGAPPGYYGMDSTQPSPDQSGLDMAGMKQIKQEPIYDLTPVPNLFPYSSYQDSQLAPGVSM-----GELDRIAQNIIKSHLETCQYTAEELQQLAWQTHSYEEVKMYQSKSR--EVLWQQCAIQITHAIQYVV----EFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCSLQLTEEE-IALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIGRIPTLAALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDAAGVMPK 471
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Cavefish
Match: rorb (RAR related orphan receptor B [Source:NCBI gene;Acc:103038205]) HSP 1 Score: 91.2781 bits (225), Expect = 3.063e-19 Identity = 105/470 (22.34%), Postives = 184/470 (39.15%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI-IGHTNKRKYDKSSDKVTD----------KNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTD-----------NSIQIFPSQ-----------KKETI--VPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARL-LTEEEWDTLFFIHKSYID-NFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNID----PLMLEVFNMNLSNVAKK 1566 C +CGDK+ G ++G ITCE CK FFRR+ + C + C I R C +CRL KC + M ++ + G +K++ D +V + + + + S Y N ++ +S Q P Q K+E I + VPN+ + + + P V M +L I + + L T EE L + SY + ++S S + I + ++ ++V FAK ++ F L Q+ QI LLK L +++R +N N + ++ K G +L + +S L ++E I++ L S+D L + + V + +K L+H ++ H D+ + + + L L L ++ Q + P ++ PL E+FN + + V K Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQQTGEAEALARVYSTGLSSGLGSLGHDLGSAYTNGHLIDMPKGQANGAPPGYYGMDSTQPSPDQSGLDMAGMKQIKQEPIYDLTPVPNLFPYSSYQDSQLAPGVSM-----GELDRIAQNIIKSHLETCQYTAEELQQLAWQTHSYEEVKMYQSKSR--EVLWQQCAIQITHAIQYVV----EFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCSLQLTEEE-IALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIGRIPTLAALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDAAGVMPK 467
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Cavefish
Match: rorb (RAR related orphan receptor B [Source:NCBI gene;Acc:103038205]) HSP 1 Score: 90.8929 bits (224), Expect = 3.826e-19 Identity = 105/470 (22.34%), Postives = 184/470 (39.15%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI-IGHTNKRKYDKSSDKVTD----------KNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTD-----------NSIQIFPSQ-----------KKETI--VPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARL-LTEEEWDTLFFIHKSYID-NFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNID----PLMLEVFNMNLSNVAKK 1566 C +CGDK+ G ++G ITCE CK FFRR+ + C + C I R C +CRL KC + M ++ + G +K++ D +V + + + + S Y N ++ +S Q P Q K+E I + VPN+ + + + P V M +L I + + L T EE L + SY + ++S S + I + ++ ++V FAK ++ F L Q+ QI LLK L +++R +N N + ++ K G +L + +S L ++E I++ L S+D L + + V + +K L+H ++ H D+ + + + L L L ++ Q + P ++ PL E+FN + + V K Sbjct: 25 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQQTGEAEALARVYSTGLSSGLGSLGHDLGSAYTNGHLIDMPKGQANGAPPGYYGMDSTQPSPDQSGLDMAGMKQIKQEPIYDLTPVPNLFPYSSYQDSQLAPGVSM-----GELDRIAQNIIKSHLETCQYTAEELQQLAWQTHSYEEVKMYQSKSR--EVLWQQCAIQITHAIQYVV----EFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCSLQLTEEE-IALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIGRIPTLAALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDAAGVMPK 482
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Cavefish
Match: vdrb (vitamin D receptor b [Source:NCBI gene;Acc:564511]) HSP 1 Score: 90.1225 bits (222), Expect = 4.320e-19 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN C I+ + RR C CRL +C + M KE I+ Sbjct: 21 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGNCSITKDNRRHCQACRLKRCLDIGMMKEFIL 94 HSP 2 Score: 74.3294 bits (181), Expect = 6.615e-14 Identity = 59/220 (26.82%), Postives = 105/220 (47.73%), Query Frame = 1 Query: 922 FFESGSMSPSAIED-----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFN 1539 + E GS SP + ED + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W E +++ K EL E ++ KKL + +E+++ + +CL S D + D V + D+ +L+ Y+ H R ++ ++ L DL+ L +H + L P + + PL+LEVF Sbjct: 191 YQEQGSGSPESPEDNSSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRELSAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPEFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHARVEALQDQLSEILQSYIRVHHS--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFG 406
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000201.1 (pep scaffold:Pmarinus_7.0:GL476657:122907:137950:1 gene:ENSPMAG00000000180.1 transcript:ENSPMAT00000000201.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 85.8853 bits (211), Expect = 2.346e-18 Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 175 QNIISSQENEIENDYFTNLIISDLCEIKELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTN---------KRKYDKSSDKV 540 QN+ S N +E+D +E K+C VCGDKA GY+F A+TCE CK FFRR+ + + C F C I+ + RR C CRL +C + M KE I+ KRK + S+ +V Sbjct: 5 QNMTVSTSNALEDD-------------EEGGVPKVCGVCGDKATGYHFNAMTCEGCKGFFRRSMKRSASFTCPFEGKCNITKDNRRHCQACRLKRCRDIGMMKELIMTEEEVQRKKEIIMKRKLEDSAREV 122 HSP 2 Score: 74.7146 bits (182), Expect = 1.108e-14 Identity = 54/199 (27.14%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 970 LINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHI--DPTN---IDPLMLEVFN 1539 L +L + + ++K+I FAK + F L QI+LLK + + +ILRS + ++ N W E ++++ EL E ++ + KKL + E+++ + +CLFS D + DR V ++ + L+ Y+ H ++ +V L +L+ L +H + L I D N + PL+LEVF Sbjct: 206 LPHLADLVSYSIQKVIGFAKMIPGFKELCTEDQISLLKASAIEIIILRSNESFTMEDNSWTCGSNEFKYQIGDVMQAGHKLELLEPLVKFQVNMKKLDLHEAEHVLLMA--ICLFSPDRPGVQDRCRVEEVQEHLTETLRAYIACRHPLSCKHMLYAKMVEKLTELRSLNEEHSKQYLQISQDAVNKEDLPPLLLEVFG 402
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004045.1 (pep scaffold:Pmarinus_7.0:GL477450:33951:67473:1 gene:ENSPMAG00000003695.1 transcript:ENSPMAT00000004045.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 80.1073 bits (196), Expect = 5.805e-18 Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCGD+A GY+F A+TCE CK FFRR+ + + C F+ C I+ + RR C CRL +C + M KE I+ Sbjct: 22 RICGVCGDRATGYHFNAMTCEGCKGFFRRSMKRSASFTCPFDGRCSITKDNRRHCQSCRLKRCKDIGMMKELIM 95
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006803.1 (pep scaffold:Pmarinus_7.0:GL479639:153667:156574:-1 gene:ENSPMAG00000006138.1 transcript:ENSPMAT00000006803.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 74.7146 bits (182), Expect = 9.367e-16 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 271 VKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE 486 V+ C VCGD+A G ++GA++CE CK FF+R+ K C ++ C I+ + R C YCRL KCF + MK E Sbjct: 124 VEFCVVCGDRASGRHYGAVSCEGCKGFFKRSVRKNLKYTCRGSQDCVINKHHRNRCQYCRLQKCFNVGMKTE 195
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Sea Lamprey
Match: rorb (RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]) HSP 1 Score: 72.0182 bits (175), Expect = 9.421e-14 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI-IGHTNKRKYD 522 C +CGDK+ G ++G ITCE CK FFRR+ + C + C I R C +CRL KC + M ++ + G +K++ D Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 102
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Sea Lamprey
Match: hnf4g (hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]) HSP 1 Score: 71.633 bits (174), Expect = 1.067e-13 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 271 VKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI 492 + C++CGD+A G ++GA +C+ CK FFRR+ K C +++ C + + R C Y RL KCF+ MKKE + Sbjct: 60 MSFCAICGDRATGKHYGASSCDGCKGFFRRSIRKNHMYSCRYSRQCVVDKDKRNQCRY-RLKKCFRAGMKKEAV 132
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Nematostella
Match: EDO27017 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAF5]) HSP 1 Score: 78.1814 bits (191), Expect = 2.998e-16 Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI 492 ++C++CGD++ G+++G +CE CK+FF+R K+ CV +K+C+I N R C YCR KC + M KE + Sbjct: 12 RVCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQIDKNNRIRCQYCRFQKCLALGMLKEAV 84
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Nematostella
Match: EDO42195 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S286]) HSP 1 Score: 78.9518 bits (193), Expect = 4.476e-16 Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI 492 ++C++CGD++ G+++G +CE CK+FF+R K+ CV +K+C+I N R C YCR KC + M KE + Sbjct: 12 RVCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQIDKNNRIRCQYCRFQKCLALGMLKEAV 84
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Nematostella
Match: EDO39982 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8G8]) HSP 1 Score: 76.6406 bits (187), Expect = 2.879e-15 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 277 ICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI 492 +C VC DKA GY++G TCE CK FF+R K+ C N+ C+I+ +TR C YCR KC K M K+ + Sbjct: 3 LCVVCNDKATGYHYGVFTCEGCKGFFKRTVQKQLEYTCRGNQDCDINQHTRNRCQYCRFEKCVKSGMLKQAV 74
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Nematostella
Match: EDO44573 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVG6]) HSP 1 Score: 67.781 bits (164), Expect = 2.143e-14 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 271 VKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKE 486 ++ICSVCGD + G ++GA TCE CK FF+R+ K+ C C ++ R C +CR+ KC + MK+E Sbjct: 1 MEICSVCGDHSTGKHYGANTCEGCKLFFKRSIKKRLYYTCRVAGCCPVNKRYRNSCQFCRMRKCLAVGMKRE 72
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Nematostella
Match: EDO37645 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SF49]) HSP 1 Score: 73.9442 bits (180), Expect = 2.654e-14 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 268 NVKI-CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENI 492 NV++ C+VCGDK+ G ++G TCE CK+FF+R+ + C ++ C I + R C YCRL KC K+ M++E + Sbjct: 23 NVQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYTCRASRDCPIDQHHRNQCQYCRLKKCLKVGMRREAV 98
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Medaka
Match: vdralpha (vitamin D receptor alpha [Source:NCBI gene;Acc:100169844]) HSP 1 Score: 127.872 bits (320), Expect = 7.923e-32 Identity = 112/447 (25.06%), Postives = 197/447 (44.07%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLS---REGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIED----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + + + E I S+ + + K+ D S F + F+P V S S+ + L S++D S + T+ + +L ++ + G SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W + +++ K EL E ++ KKL + +E+++ + +CL S D + D + + D+ L+ Y+ H R ++ ++ L DL+ L +H + L P + + PL+LEVF +S Sbjct: 23 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCNITKDNRRHCQACRLKRCIDIGMMKEFIL----------TDEEVQRKKEMIMKRKEEEAAREAMRPRLNEEQARIISSLVE---AHHKTYDASYSDF-----------------------SRFRPPVRDGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKMNFSSLLMMY--------QDGVNSPDSSEEDTKLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHARIEQLQDRLSEALQAYIRVNHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS 421
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Medaka
Match: vdralpha (vitamin D receptor alpha [Source:NCBI gene;Acc:100169844]) HSP 1 Score: 127.872 bits (320), Expect = 7.959e-32 Identity = 112/447 (25.06%), Postives = 197/447 (44.07%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLS---REGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIED----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + + + E I S+ + + K+ D S F + F+P V S S+ + L S++D S + T+ + +L ++ + G SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W + +++ K EL E ++ KKL + +E+++ + +CL S D + D + + D+ L+ Y+ H R ++ ++ L DL+ L +H + L P + + PL+LEVF +S Sbjct: 22 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCNITKDNRRHCQACRLKRCIDIGMMKEFIL----------TDEEVQRKKEMIMKRKEEEAAREAMRPRLNEEQARIISSLVE---AHHKTYDASYSDF-----------------------SRFRPPVRDGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKMNFSSLLMMY--------QDGVNSPDSSEEDTKLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHARIEQLQDRLSEALQAYIRVNHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS 420
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Medaka
Match: vdralpha (vitamin D receptor alpha [Source:NCBI gene;Acc:100169844]) HSP 1 Score: 127.872 bits (320), Expect = 7.959e-32 Identity = 112/447 (25.06%), Postives = 197/447 (44.07%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKP-----TVIMSVSKKSKLISINDKLS---REGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIED----ANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEIS---SEIIKTAGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQIL--LHIDPTN---IDPLMLEVFNMNLS 1551 +IC VCGDKA G++F A+TCE CK FFRR+ +K+ C FN +C I+ + RR C CRL +C + M KE I+ + ++V K + + + + E I S+ + + K+ D S F + F+P V S S+ + L S++D S + T+ + +L ++ + G SP + E+ + L +L + + ++K+I FAK + F L QIALLK + + ++LRS ++++ W + +++ K EL E ++ KKL + +E+++ + +CL S D + D + + D+ L+ Y+ H R ++ ++ L DL+ L +H + L P + + PL+LEVF +S Sbjct: 22 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCNITKDNRRHCQACRLKRCIDIGMMKEFIL----------TDEEVQRKKEMIMKRKEEEAAREAMRPRLNEEQARIISSLVE---AHHKTYDASYSDF-----------------------SRFRPPVRDGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKMNFSSLLMMY--------QDGVNSPDSSEEDTKLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMA--ICLLSPDRPGVQDHARIEQLQDRLSEALQAYIRVNHP--GGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS 420
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Medaka
Match: ppara (peroxisome proliferator activated receptor alpha [Source:NCBI gene;Acc:100304458]) HSP 1 Score: 97.4413 bits (241), Expect = 3.261e-21 Identity = 105/433 (24.25%), Postives = 178/433 (41.11%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNK---TCEISVNTRRFCTYCRLMKCFKMQMKKENI----IGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGF-LVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKT--AGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHI---DPTNIDPLMLEVF 1536 C VC D+A G+++G CE CK FFRR K +NK C+I R C YCR KC + M I + H K K K KV +K + S + V R I+ Y+ T N K I+ + IIH+ ++F+ + ++ +A ++ E ++ + ++ ES + E A L + S+ V +L FAK + DF L+ + Q+ LLK AV +L A N D + +G I+ E +K+ ++ E ++ F + + + + + I+C D L D V + + I L+H+L + H D +F ++ L DL+ L ++H Q++ I + T++ PL+ E++ Sbjct: 92 CRVCSDRASGFHYGVHACEGCKGFFRRTIRLK----LEYNKCERNCKIQKKNRNKCQYCRFNKCLIVGMSHNAIRFGRMPHAEKLKL-KEESKVAEKEVESCMEGDGKTLV-----------RQIHDAYMKSFTMN------------KAKARLILTGKTSEPPFIIHDMDTFQ---------------LAERTLAAYMAHMVKGERLESESELRVEHVTPAGESEELQQREAE-ARLFHCCQSTSVETVTELTEFAKAMPDFQTLDLNDQVTLLKYAVHEALFTLLASCMNKDGLLVARGRGFITREFLKSLRRPFSDMMEPKFQFATRFNSMDLDDSDLALFVAAIIC--CGDRPGLVDIPVVERLQESIIQALRHHLLANHP--DDTFLFPRLLQKLADLRELVTEHAQLIQEIKTLEDTSLHPLLQEIY 476
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Medaka
Match: ppara (peroxisome proliferator activated receptor alpha [Source:NCBI gene;Acc:100304458]) HSP 1 Score: 97.4413 bits (241), Expect = 3.261e-21 Identity = 105/433 (24.25%), Postives = 178/433 (41.11%), Query Frame = 1 Query: 280 CSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNK---TCEISVNTRRFCTYCRLMKCFKMQMKKENI----IGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGF-LVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKT--AGLYELQEDYGRYCRSFKKL-MGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHI---DPTNIDPLMLEVF 1536 C VC D+A G+++G CE CK FFRR K +NK C+I R C YCR KC + M I + H K K K KV +K + S + V R I+ Y+ T N K I+ + IIH+ ++F+ + ++ +A ++ E ++ + ++ ES + E A L + S+ V +L FAK + DF L+ + Q+ LLK AV +L A N D + +G I+ E +K+ ++ E ++ F + + + + + I+C D L D V + + I L+H+L + H D +F ++ L DL+ L ++H Q++ I + T++ PL+ E++ Sbjct: 92 CRVCSDRASGFHYGVHACEGCKGFFRRTIRLK----LEYNKCERNCKIQKKNRNKCQYCRFNKCLIVGMSHNAIRFGRMPHAEKLKL-KEESKVAEKEVESCMEGDGKTLV-----------RQIHDAYMKSFTMN------------KAKARLILTGKTSEPPFIIHDMDTFQ---------------LAERTLAAYMAHMVKGERLESESELRVEHVTPAGESEELQQREAE-ARLFHCCQSTSVETVTELTEFAKAMPDFQTLDLNDQVTLLKYAVHEALFTLLASCMNKDGLLVARGRGFITREFLKSLRRPFSDMMEPKFQFATRFNSMDLDDSDLALFVAAIIC--CGDRPGLVDIPVVERLQESIIQALRHHLLANHP--DDTFLFPRLLQKLADLRELVTEHAQLIQEIKTLEDTSLHPLLQEIY 476
BLAST of Nuclear hormone receptor HR96 vs. Planmine SMEST
Match: SMESG000074066.1 (SMESG000074066.1) HSP 1 Score: 915.99 bits (2366), Expect = 0.000e+0 Identity = 471/475 (99.16%), Postives = 474/475 (99.79%), Query Frame = 1 Query: 142 MDQSDSYSLQFQNIISSQENEIENDYFTNLIISDLCEIKELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNIXXXXXXXXXXXXXXXXXXXXMEDRSINSNYINDDTTNLKSTDNSIQIFPSQKKETIVPNVPNVNGHIIHNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNMNLSNVAKK 1566 MDQSDSYSLQFQNIISSQENEIENDYFTNLIISDLCEIKELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNINSSEFVVNNSCVSSSCISASMEDRSINSNYINDDTTNLKSTD+SIQIFPSQKKETI+PNV NVNGHII+NSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNMNLSNVAKK Sbjct: 1 MDQSDSYSLQFQNIISSQENEIENDYFTNLIISDLCEIKELTNVKICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSPPPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENIIGHTNKRKYDKSSDKVTDKNINSSEFVVNNSCVSSSCISASMEDRSINSNYINDDTTNLKSTDSSIQIFPSQKKETIIPNVSNVNGHIINNSNSFKPTVIMSVSKKSKLISINDKLSREGLARLLTEEEWDTLFFIHKSYIDNFFESGSMSPSAIEDANLINLINSSGFLVRKLINFAKCLSDFTILEQSCQIALLKGAVLNSLILRSAVEYNIDKNVWVTPQGEISSEIIKTAGLYELQEDYGRYCRSFKKLMGSDEYLISITQILCLFSSDNLSLTDRQFVSDIHDKYIVLLKHYLESTHGFIDSRSMFVLIVSNLIDLQCLTSKHGQILLHIDPTNIDPLMLEVFNMNLSNVAKK 475
BLAST of Nuclear hormone receptor HR96 vs. Planmine SMEST
Match: SMESG000066789.1 (SMESG000066789.1) HSP 1 Score: 89.3521 bits (220), Expect = 9.830e-19 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSP--PPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCG+KA G+NF +TCESCKAFFRRNA K PC C IS + R+ C YCRL KCF MKKE I+ Sbjct: 50 RICVVCGEKASGFNFDRLTCESCKAFFRRNAMKPKEKMKPCPHGGGCNISGSQRKHCPYCRLEKCFTEGMKKELIL 125
BLAST of Nuclear hormone receptor HR96 vs. Planmine SMEST
Match: SMESG000066789.1 (SMESG000066789.1) HSP 1 Score: 89.3521 bits (220), Expect = 9.850e-19 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSP--PPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCG+KA G+NF +TCESCKAFFRRNA K PC C IS + R+ C YCRL KCF MKKE I+ Sbjct: 50 RICVVCGEKASGFNFDRLTCESCKAFFRRNAMKPKEKMKPCPHGGGCNISGSQRKHCPYCRLEKCFTEGMKKELIL 125
BLAST of Nuclear hormone receptor HR96 vs. Planmine SMEST
Match: SMESG000066789.1 (SMESG000066789.1) HSP 1 Score: 89.3521 bits (220), Expect = 1.018e-18 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSP--PPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCG+KA G+NF +TCESCKAFFRRNA K PC C IS + R+ C YCRL KCF MKKE I+ Sbjct: 53 RICVVCGEKASGFNFDRLTCESCKAFFRRNAMKPKEKMKPCPHGGGCNISGSQRKHCPYCRLEKCFTEGMKKELIL 128
BLAST of Nuclear hormone receptor HR96 vs. Planmine SMEST
Match: SMESG000066789.1 (SMESG000066789.1) HSP 1 Score: 89.3521 bits (220), Expect = 1.033e-18 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 274 KICSVCGDKALGYNFGAITCESCKAFFRRNAHKKSP--PPCVFNKTCEISVNTRRFCTYCRLMKCFKMQMKKENII 495 +IC VCG+KA G+NF +TCESCKAFFRRNA K PC C IS + R+ C YCRL KCF MKKE I+ Sbjct: 50 RICVVCGEKASGFNFDRLTCESCKAFFRRNAMKPKEKMKPCPHGGGCNISGSQRKHCPYCRLEKCFTEGMKKELIL 125 The following BLAST results are available for this feature:
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Nuclear hormone receptor HR96 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30007841 ID=SMED30007841|Name=Nuclear hormone receptor HR96|organism=Schmidtea mediterranea sexual|type=transcript|length=1590bpback to top protein sequence of SMED30007841-orf-1 >SMED30007841-orf-1 ID=SMED30007841-orf-1|Name=SMED30007841-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=476bp MDQSDSYSLQFQNIISSQENEIENDYFTNLIISDLCEIKELTNVKICSVCback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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