G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30007707 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: R7U5B9 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_201825 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.842e-44 Identity = 121/379 (31.93%), Postives = 194/379 (51.19%), Query Frame = 1 Query: 304 NSSLNILVRYNHQSMNIYHNFTYIYTM-EYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISM---KNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFSIK----NRSSSTMTRNSCGNVHIANISAVFTPLKK 1416 N SL++ RY H N+Y FT + T + +P+W +GIPG+I+ F IW + SS YL L+++DL+F F F L N + + P +C+ FP I + QY P+L LGF+VER +S+CHPF ++ + + V+ L+ CVLL + YF+ Y E ++ C+V I L + +I + +TE +VF +VPL I ++NI VI E+ M + +R+ + +A+T LL+VSFYL+ T+P TV L N ISD ++ + W+ H +++ +E ++ A F++Y++T + FR F+ +F K +SSTM +SA PL+ Sbjct: 87 NESLDL--RYRHP--NLYEEFTPLATFADKYLLPVWYVVGIPGNILAFIIWIQPKMRPSSGCYLAALAMDDLVFLFLKFFFELTNTWALPIFNVPVLCEVFPVIFLASQYYDPVLVLGFTVERYISICHPFQREKFCSTRRAVKVIAGLLLCCVLLHAVQGYFWYYSSETQQ---CSVRLA-ITLGNNA------SIWTVWSWITELLVFGLVPLTILILNIMVILEVRKMSASEEKRMCLKKGHKTGGQTSATTFMLLVVSFYLIFTTLPVTVCYALNLNFREGEFLISDEELLTDSTWQRHFNFTTVRRLLENFGMSHYACNFYLYMMTGKVFRKEFRRIFLAKCTKDKSASSTM-----------GLSAASAPLRD 440
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0K0PUI8 (Orphan G-protein coupled receptor 50 OS=Platynereis dumerilii OX=6359 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 4.586e-36 Identity = 97/341 (28.45%), Postives = 180/341 (52.79%), Query Frame = 1 Query: 301 SNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPK-NLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMF 1320 + + ++L RY + + + T +YI P+W +G P +++ F +W R SS YL L+++D++F I H +F L ++ + P +C+ FP + QY +PLL L F+VER +++CHPF ++ ++ L+ + + + + YF+ Y + +E CT+ +D+ ++ +++ + +TE +VF +VP++I ++NI VI E + + + +AA T TLL VSFYL+ T+P T+F + + +FP+ + +SD +I + W+ H + I+ VE L ++ A FFIY+ T + FR ++F Sbjct: 20 TEGTQHVLQRYTQEQLYAIYRPTISIITKYI-TPVWYVIGFPSNMLAFTVWVQPRMRPSSGCYLAALAMSDVIFLILHLVFELQMTWDVRLLKLPVLCEVFPIFFLSSQYMSPLLVLAFTVERFIAICHPFRREKFCTTSRAIKVIIGLVILSMCIHAVQGYFWIYRADIDE---CTI-------RDEMMLGGTKSVWSVWSWITELLVFGLVPVVILILNILVIKEAQKLSRTEESRLCLRRGHKTSAA-TLTLLSVSFYLILTTLPVTLFYAM-YLSFPEGDFFMSDDEIAADPTWQRHFTYFLIRTLVEELGMSHFACNFFIYVSTGKLFRRELTVLF 347
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A1S3HS84 (probable G-protein coupled receptor 139 isoform X1 OS=Lingula unguis OX=7574 GN=LOC106157323 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.324e-33 Identity = 107/385 (27.79%), Postives = 188/385 (48.83%), Query Frame = 1 Query: 289 NGNCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYI---KTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSN----FQMMFSIKNRSSSTMTRNSCGNVHIANISAVFTPLKKSK 1422 NG+ S S ++I H + I T+E ++ G+ G+ + F +W RR HSS YL L+++DL F + H L+ HYI K + C+ F + + Q+ +P+ L F++ER ++VCHPF D+I ++ + +C+L+ + YF++Y + ++ C +++ + LI + ++ + VTE ++FAVVPL++ + NI VI E + I S+ + +T LL VSF+L+ T+P T+ L + +SD +I L+ +W+ HL++ +I+ V+ + A F+IY +T + FR F+ +F I+ S T NS H S L+ S+ Sbjct: 56 NGSVSRSEIDIY--QVHLPLKI--------TLEQWVPIVYYIFGLSGNFLAFIVWIQRRMQHSSGCYLAALALSDLCFLLLHMLY---EIHYIWGHKVFNANGACQIFAIVFMWTQHMSPMFVLAFTIERYLAVCHPFKRDKICTKSLAIKVIVSITVVCLLIDGMQGYFWTYVSKADD---C-------DVRGETLIGGVGSVWSVWSWVTEILIFAVVPLLVLIFNILVIHEARKLSENEKIQLQSRKG-RRTSTTTFMLLAVSFFLIFTTLPVTIVYNLYAVFQQGDPTLSDEEIHLDQKWQAHLKYTAIKTLVQYFGMAHYACNFYIYCITGKMFRKELVLIFKRVFRIQIPVSRRGTFNSSLRTHSTGFSLRSGALRASE 416
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A267H1H3 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig030285g1 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.892e-33 Identity = 111/339 (32.74%), Postives = 178/339 (52.51%), Query Frame = 1 Query: 328 RYNHQSMNIYHNF-TYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHY-IKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVF---QLLKFNNFPKNLC-ISDSDIW---LNYEW---KMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNF 1308 RYN ++ + F + T I +P+W+ LG+PGS++ +WS + SS +YLC L+I DL+F + L + +Y IK + NPFMC+ FP N+ LQY +PLLTLGF+VER + +CHPF + + + C++L L +L+FY Y N + +C+ + + + D + + + +TE + FA+ P+ I + NI V+ E + +R T + S AA+T TLL VSFY + A +P T+ L P+ C I DSD + +W + +L ++++ V+ LA ++ A KF IY+ T Q FR Sbjct: 19 RYN-STLGVCSAFLPGVVTFARIIIPMWIALGVPGSLLSLLVWSSKPMRSSSSVYLCALAILDLMFLLCQQLPFHLYLYYDIKVMYNPFMCRAFPVYNMWLQYLSPLLTLGFTVERYIGICHPFSRKEFCTVRRAIIVVSCMTVACLVLGLVQLHFYRY---NPVEATCS---EDLRIFDPSTFE--HRFYSGWSKLTEVLFFALAPVAILVFNILVLVEARRVIRKRPAGTGQRKS----AATTATLLTVSFYQIGAVLPVTILLFVGLAILTEAPQLPCGIPDSDALHQITDGQWPVARSYLTYLTVSRIVDCLAVSHYAMKFVIYLATGQGFRRQL 344
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A1S3K6M5 (probable G-protein coupled receptor 139 isoform X2 OS=Lingula unguis OX=7574 GN=LOC106179100 PE=4 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.718e-32 Identity = 98/348 (28.16%), Postives = 174/348 (50.00%), Query Frame = 1 Query: 289 NGNCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYI---KTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFS 1323 NG+ S S ++I H + I T+E ++ G+ G+ + F +W RR HSS YL L+++DL F + H L+ HYI K + C+ F + + Q+ +P+ L F++ER ++VCHPF D+I ++ + +C+L+ + YF++Y + ++ C V + + LI + ++ + VTE ++FAVVPL++ + NI VI E + I S+ + +T LL VSF+L+ T+P T+ L + +SD +I L+ +W+ HL++ +I+ V+ + A F+IY +T + FR ++F Sbjct: 56 NGSVSRSEIDIY--QVHLPLKI--------TLEQWVPIVYYIFGLSGNFLAFIVWIQRRMQHSSGCYLAALALSDLCFLLLHMLY---EIHYIWGHKVFNANGACQIFAIVFMWTQHMSPMFVLAFTIERYLAVCHPFKRDKICTKSLAIKVIVSITVVCLLIDGMQGYFWTYVSKADD---CDV-------RGETLIGGVGSVWSVWSWVTEILIFAVVPLLVLIFNILVIHEARKLSENEKIQLQSRKG-RRTSTTTFMLLAVSFFLIFTTLPVTIVYNLYAVFQQGDPTLSDEEIHLDQKWQAHLKYTAIKTLVQYFGMAHYACNFYIYCITGKMFRKELVLIFK 379
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000032057.1 (SMESG000032057.1) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 1 Query: 280 MVENGNCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFSIKNRSSSTMTRNSCGNVHIANISAVFTPLKKSKLFYSNEMEKVYNKCPK 1470 MVENGNCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDLLFFIFHFLFYLNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFSIKNRSSSTMTRNSCGNVHIANISAVFTPLKKSKLFYSNEMEKVYNKCPK Sbjct: 1 MVENGNCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDLLFFIFHFLFYLNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFSIKNRSSSTMTRNSCGNVHIANISAVFTPLKKSKLFYSNEMEKVYNKCPK 397
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000012527.1 (SMESG000012527.1) HSP 1 Score: 207.223 bits (526), Expect = 6.671e-61 Identity = 138/362 (38.12%), Postives = 216/362 (59.67%), Query Frame = 1 Query: 295 NCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRIS--NYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFSIKNRS-----SSTMTRN 1359 C N SL++ R+ + +Y++FT + E I +PI +CLG+PG+I F IW+ ++ +SS +YL L+I+D LF I H +++L++ + I I+N F C FP N++LQY +P+LTL F+VER +S+C PF +R+ N TV + + S C+ ALP LYF+ ++ N + T+Y Y K N + + + Y I+TE+++FA +P +I ++NIRVI E+ + S S+ A+T TLL VSFYL+CA++P T+ L FN NLC SDS+I + W+ H R+V++Q+ +E + TY AKF+IY+ TS+ FR+ F +F N++ SS M R Sbjct: 8 KCINGSLDVYGRHK-SDLGLYNHFTVKHLFEQITVPILVCLGLPGTIFSFIIWTRKQMRYSSSIYLISLAISDSLFIIGHIIWHLDSTYNIPVINNRFTCNIFPVFNLLLQYMSPILTLAFTVERYISICWPFSKERLCSINRAITVSSVLFIKSFCI--ALPMLYFFRFDSTNINR-CLTIYEIY---KSSNPKDESTDWLFIYNIITESIMFACIPFIILIINIRVIIEMWKIYKSSKTGIRSSER-SHKGATTVTLLSVSFYLICASLPLTIVHLCGFNLEEGNLCASDSEILADAIWRKHFRYVNVQVFIEFFSLTYYGAKFYIYLGTSEAFRTAFLQLFVPDNKAFPDSKSSRMDRK 361
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000066742.1 (SMESG000066742.1) HSP 1 Score: 174.096 bits (440), Expect = 1.140e-48 Identity = 118/374 (31.55%), Postives = 203/374 (54.28%), Query Frame = 1 Query: 289 NGNCSNSSLNI--LVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVI-------------FELISMKNRRLISTASQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNF-PKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMFSIKNRSSSTMTRNS 1362 + +C N S+N V M +Y FT ++ I +PIWL LGIPGSI C +W+ + H+S +YL L +DL FFI F+++L I ++ P +C+ F IN LQY +PL T F++ER + +C PF +R + + ++ I LL+L + YF+ Y+ E +E + Q E QN ++ + ++TET++F ++PL I ++N+ VI F+LI +NR+ + S+ + + NA++T LL +SFY + +T+P T+ QLL +NF + C++ ++++ + W+ H + V+++ +E LA ++ +AKF+IY++T FR F +F + RN Sbjct: 4 SDDCQNKSVNFTKFVNLFGDFMGVYEAFTIKGSLHRIIIPIWLILGIPGSIFCVIVWTRPKMLHTSSVYLAALGASDLGFFICQFVWFLKTAWRIDLLNVPVLCELFAVINFFLQYLSPLFTFAFTLERFILICFPFKGERFLSVPRAITVTLVITLIAFLLSLIQGYFFEYKEEIKECIERSSVVQ--EGTWQN------RLLFYWNLITETVIFGLIPLSILILNLFVIKETKILQSNAPVKFKLI--ENRQNV-INSKTTDNRNASTTVMLLSISFYFILSTLPVTIMQLLIIHNFWNGDECLTVTEVYSDPIWQAHFKAVNVKSVIETLALSHYSAKFYIYMITGVQFRIQFLNIFKRHSNKQILFRRNG 366
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000042511.1 (SMESG000042511.1) HSP 1 Score: 171.014 bits (432), Expect = 1.062e-47 Identity = 114/355 (32.11%), Postives = 188/355 (52.96%), Query Frame = 1 Query: 298 CSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGSIICFRIWSIRRQHHS-SVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYI----ELK------DQNLIKKLR-NIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISMKNRRLISTA--SQPSYSNNAASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSNFQMMF 1320 C N S + +R+ + + FT Y +E +F+P W LG PG++I IW+ HH S LYL +L++ D LFF H +++L + + I TI N MC FP IN++LQY +PLL LGF+VER +SVC+P ++ C + +YFY Y+ + C ++ EL+ Q L R + + +++E+ +F V+P +I +NI VI +L + R I T S+ ++T +LL VSF+L+ ++P ++ Q++K + + C+SD +I + WK + + +IQ+ +EML+ T+ AA F+IY+ T + FR F +F Sbjct: 7 CLNGSKSAYMRHK-SDLEFDNQFTIKYRLEVVFIPTWFVLGFPGNLISIYIWTRYSMHHMVSSLYLAVLAVVDCLFFGRHLIWHLQSIYNIHTIKNHVMCHLFPMINMVLQYLSPLLILGFTVERFISVCYPLYRRKL----------------CTVERTKHIYFYHYKNFLDLTDDCVDIVSWLMSQYELQFNSSSAKQQLQTDWRYHFFNMFNLISESFIFIVIPFLILFLNIAVIVKLNQVHKFRRILTRNFSKKHEDRQLSATISLLSVSFFLIITSLPTSIVQMMKLDLTKDDTCLSDDEIRRDPAWKAYFLNKNIQVQIEMLSLTHYAANFYIYLCTCRQFREQFIRLF 344
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000018637.1 (SMESG000018637.1) HSP 1 Score: 98.9821 bits (245), Expect = 4.513e-22 Identity = 85/332 (25.60%), Postives = 156/332 (46.99%), Query Frame = 1 Query: 376 YTMEYIFMPIWLCLGIPGSIICFRIWSIR--RQHHSSVLYLCLLSINDXXXXXXXXXXXXNNYHYIKTIDNPFMCKFFPFINIILQYAAPLLTLGFSVERCVSVCHPFISDRISNYKTTVRTCFLLISICVLLALPKLYFYSYEGENEEKGSCTVYYQYIELKDQNLIKKLRNIMLTYEIVTETMVFAVVPLMIFLVNIRVIFELISM--------------KNRRLISTASQPSYSNN------AASTTTLLIVSFYLLCATIPATVFQLLKFNNFPKNLCISDSDIWLNYEWKMHLRHVSIQIPVEMLAKTYNAAKFFIYIVTSQWFRSN 1305 Y ++ +PI+L +GI G+ I F +W R R+++SS +Y+ +L+IND I ++YL + ID +CKF+ I LQY + LL GF++ER ++VC+PF +R C ++ S + P + + Y+ C+V +IE +TY + E + A++P++ VNIRV+ E+ + +N + S S+ N ++T TLL+VSF+ + T+P + + +P+ S + + WK H + + +++L+ ++ IY+ +S FR++ Sbjct: 25 YQLQLYSIPIFLTVGILGNPISFVVWVSRKLRRNNSSAVYIAMLAINDFFVVICSIIYYLRHSWGFGIIDIRGICKFYMVIFTFLQYNSILLVFGFTIERWIAVCYPFRRERCCTENRAWIACGIIFSSVFISVFPLFFVWHYQ------PLCSVPKHWIE----------NTYFVTYSLTLEILFSALLPVITLAVNIRVVVEMYRISETIVTFPKLSAVNQNFEIPSQKSRKHSKNTENSISFKSTTITLLLVSFFQILTTLPLGAVYICQI-FYPEGNATSVKQMQNDPIWKKHFQMHGAKDIIDLLSLSHYCFNIVIYLASSHLFRNH 339 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30007707 ID=SMED30007707|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1747bpback to top protein sequence of SMED30007707-orf-1 >SMED30007707-orf-1 ID=SMED30007707-orf-1|Name=SMED30007707-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=119bp ICATNVFFPQEVSSNINIIPENYLLRWAKKILIKQYVKLFHNMRHIKRLNback to top protein sequence of SMED30007707-orf-2 >SMED30007707-orf-2 ID=SMED30007707-orf-2|Name=SMED30007707-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=398bp MVENGNCSNSSLNILVRYNHQSMNIYHNFTYIYTMEYIFMPIWLCLGIPGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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