CCR4-NOT transcription complex subunit 7

Overview


Name	CCR4-NOT transcription complex subunit 7
Smed ID	SMED30007616
Length (bp)	1615

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of CCR4-NOT transcription complex subunit 7 (SMED30007616) t-SNE clustered cells

Violin plots show distribution of expression levels for CCR4-NOT transcription complex subunit 7 (SMED30007616) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of CCR4-NOT transcription complex subunit 7 (SMED30007616) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for CCR4-NOT transcription complex subunit 7 (SMED30007616) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30007616

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
epidermis	SMED30007616	SMESG000021174.1	dd_Smed_v4_1081_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30007616	SMESG000021174.1	dd_Smed_v4_1081_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30007616	SMESG000021174.1	Contig48245	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30007616	SMESG000021174.1	Contig48245	uc_Smed_v2	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Human
Match: CNOT7 (CCR4-NOT transcription complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:14101])

HSP 1 Score: 199.134 bits (505), Expect = 1.142e-59
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Human
Match: CNOT7 (CCR4-NOT transcription complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:14101])

HSP 1 Score: 199.134 bits (505), Expect = 3.881e-59
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Human
Match: CNOT8 (CCR4-NOT transcription complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:9207])

HSP 1 Score: 189.119 bits (479), Expect = 2.755e-55
Identity = 94/230 (40.87%), Postives = 150/230 (65.22%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M+K+RE     + +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M+K+RE     + +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M+K+RE     + +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Celegans
Match: ccf-1 (CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345])

HSP 1 Score: 165.622 bits (418), Expect = 1.173e-46
Identity = 98/272 (36.03%), Postives = 149/272 (54.78%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHC-------GLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMD---CEIKPEWYNMIFGMNFPTGNSANLY 1072
            + NVY  N+ E   ++R F +    VA+DTEFPGV+      + S  D  Y  V  N ++LK IQ+GF+  ++ G  P      QFNF F+   DM +HES+E+L+++GIDF  L  NGI   +F EL   +GL+ +  +TW+ F   +D+ Y+LK IT   ++P     F    +  FP + D+K L+   R  +C       GLQE++  L V+R+G +HQAGSD+ LT  ++FK    +      +I P    +I G  F  G+S +L+
Sbjct:   23 IHNVYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATPLGTFRSKEDFNYQQVFCNVNMLKLIQVGFAMVNDKGELPPTGDVWQFNFNFSFAEDMFSHESVEMLRQAGIDFTLLQNNGIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSIT-LGDLPKEESTFFMCHKTLFPTSFDIKILL---RTPNCASAKLKGGLQEVADQLDVKRQGVRHQAGSDALLTAATFFKIKKQFFGDNWNQIAP----LICGHMFGLGSSLSLF 286

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
Match: Pop2 (gene:FBgn0036239 transcript:FBtr0300272)

HSP 1 Score: 195.282 bits (495), Expect = 4.108e-57
Identity = 101/254 (39.76%), Postives = 162/254 (63.78%), Query Frame = 2

Query:  278 DSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKF--VLNYMDCEIKPEWYNMIF 1033
            +  + +V+  NL E  + +R+  ++   VA+DTEFPGV+ +   ++ S  D  Y  ++ N DLL+ IQ+G +F D++G  P   ST QFNFKFN + DM   +S++LL+ SGI F + +++GIDP  FAEL + +G+V+ EN+ W+ FH  +D+ Y+LK++T  + +P +  +F +LL IYFP   D+K L+   +    GLQE++  L++ R G QHQAGSD+ LTG ++FK   V +  D  I P  ++++F
Sbjct:   18 ECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTD-QNLPPDESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMREVQHTNDFHITPVAHDVLF 270

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
Match: Pop2 (gene:FBgn0036239 transcript:FBtr0344758)

HSP 1 Score: 195.282 bits (495), Expect = 4.200e-57
Identity = 101/254 (39.76%), Postives = 162/254 (63.78%), Query Frame = 2

Query:  278 DSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKF--VLNYMDCEIKPEWYNMIF 1033
            +  + +V+  NL E  + +R+  ++   VA+DTEFPGV+ +   ++ S  D  Y  ++ N DLL+ IQ+G +F D++G  P   ST QFNFKFN + DM   +S++LL+ SGI F + +++GIDP  FAEL + +G+V+ EN+ W+ FH  +D+ Y+LK++T  + +P +  +F +LL IYFP   D+K L+   +    GLQE++  L++ R G QHQAGSD+ LTG ++FK   V +  D  I P  ++++F
Sbjct:   22 ECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTD-QNLPPDESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMREVQHTNDFHITPVAHDVLF 274

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
Match: Pop2 (gene:FBgn0036239 transcript:FBtr0076058)

HSP 1 Score: 192.2 bits (487), Expect = 1.093e-56
Identity = 96/233 (41.20%), Postives = 152/233 (65.24%), Query Frame = 2

Query:  278 DSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  + +V+  NL E  + +R+  ++   VA+DTEFPGV+ +   ++ S  D  Y  ++ N DLL+ IQ+G +F D++G  P   ST QFNFKFN + DM   +S++LL+ SGI F + +++GIDP  FAEL + +G+V+ EN+ W+ FH  +D+ Y+LK++T  + +P +  +F +LL IYFP   D+K L+   +    GLQE++  L++ R G QHQAGSD+ LTG ++FK
Sbjct:   22 ECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTD-QNLPPDESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFK 253

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
Match: Pop2 (gene:FBgn0036239 transcript:FBtr0076059)

HSP 1 Score: 192.2 bits (487), Expect = 1.106e-56
Identity = 96/233 (41.20%), Postives = 152/233 (65.24%), Query Frame = 2

Query:  278 DSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  + +V+  NL E  + +R+  ++   VA+DTEFPGV+ +   ++ S  D  Y  ++ N DLL+ IQ+G +F D++G  P   ST QFNFKFN + DM   +S++LL+ SGI F + +++GIDP  FAEL + +G+V+ EN+ W+ FH  +D+ Y+LK++T  + +P +  +F +LL IYFP   D+K L+   +    GLQE++  L++ R G QHQAGSD+ LTG ++FK
Sbjct:   18 ECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTD-QNLPPDESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFK 249

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
Match: Pop2 (gene:FBgn0036239 transcript:FBtr0076060)

HSP 1 Score: 192.2 bits (487), Expect = 1.106e-56
Identity = 96/233 (41.20%), Postives = 152/233 (65.24%), Query Frame = 2

Query:  278 DSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  + +V+  NL E  + +R+  ++   VA+DTEFPGV+ +   ++ S  D  Y  ++ N DLL+ IQ+G +F D++G  P   ST QFNFKFN + DM   +S++LL+ SGI F + +++GIDP  FAEL + +G+V+ EN+ W+ FH  +D+ Y+LK++T  + +P +  +F +LL IYFP   D+K L+   +    GLQE++  L++ R G QHQAGSD+ LTG ++FK
Sbjct:   18 ECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTD-QNLPPDESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFK 249

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Zebrafish
Match: cnot7 (CCR4-NOT transcription complex, subunit 7 [Source:NCBI gene;Acc:768119])

HSP 1 Score: 199.519 bits (506), Expect = 1.853e-59
Identity = 100/230 (43.48%), Postives = 152/230 (66.09%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MK++R+ +++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+   FAEL + +G+V+ E + W+ FH  +D+ Y++KI++  K +PD   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSK-LPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MK++R+ +++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+   FAEL + +G+V+ E + W+ FH  +D+ Y++KI++  K +PD   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSK-LPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MK++R+ +++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+   FAEL + +G+V+ E + W+ FH  +D+ Y++KI++  K +PD   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSK-LPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Zebrafish
Match: cnot8 (CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845])

HSP 1 Score: 194.126 bits (492), Expect = 1.775e-57
Identity = 94/230 (40.87%), Postives = 154/230 (66.96%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A N+ E M+K+R+  +    +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E+G  P   +T QFNFKFN   DM + +S++LL+ SG+ F + ++ GID   FAEL + +GLV+ EN+ W+ FH  +D+ Y++K++T  + +P+   +F ++L ++FP   D+K L+   +    GLQE++  L+++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSR-LPEEEHEFFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A N+ E M+K+R+  +    +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E+G  P   +T QFNFKFN   DM + +S++LL+ SG+ F + ++ GID   FAEL + +GLV+ EN+ W+ FH  +D+ Y++K++T  + +P+   +F ++L ++FP   D+K L+   +    GLQE++  L+++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSR-LPEEEHEFFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Xenopus
Match: nadk2 (NAD kinase 2, mitochondrial [Source:Xenbase;Acc:XB-GENE-991224])

HSP 1 Score: 196.438 bits (498), Expect = 4.503e-58
Identity = 99/230 (43.04%), Postives = 152/230 (66.09%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL + MK++R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAELF+ +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L+++R G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFVNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEVELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELKRIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Xenopus
Match: cnot8 (CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:549332])

HSP 1 Score: 188.734 bits (478), Expect = 2.152e-55
Identity = 94/230 (40.87%), Postives = 149/230 (64.78%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M K+RE  +    +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWAVNLEEEMHKIRELVRTYGYIAMDTEFPGVVVRPIGEFRSTIDYQYQLLRCNVDLLKIIQLGLTFMNEKGEYPPGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLTFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Xenopus
Match: cnot8 (CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:549332])

HSP 1 Score: 188.734 bits (478), Expect = 3.140e-55
Identity = 94/230 (40.87%), Postives = 149/230 (64.78%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M K+RE  +    +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWAVNLEEEMHKIRELVRTYGYIAMDTEFPGVVVRPIGEFRSTIDYQYQLLRCNVDLLKIIQLGLTFMNEKGEYPPGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLTFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Xenopus
Match: nadk2 (NAD kinase 2, mitochondrial [Source:Xenbase;Acc:XB-GENE-991224])

HSP 1 Score: 124.02 bits (310), Expect = 8.433e-32
Identity = 78/230 (33.91%), Postives = 119/230 (51.74%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL + MK++R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN                                       +TG               +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L+++R G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFVNEQGEYPPGTSTWQFNFKFN---------------------------------------LTG---------------YDFGYLIKILTN-SNLPEVELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELKRIGPQHQAGSDSLLTGMAFFK 186

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Mouse
Match: Cnot7 (CCR4-NOT transcription complex, subunit 7 [Source:MGI Symbol;Acc:MGI:1298230])

HSP 1 Score: 199.519 bits (506), Expect = 2.091e-59
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Mouse
Match: Cnot8 (CCR4-NOT transcription complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1916375])

HSP 1 Score: 189.504 bits (480), Expect = 1.758e-55
Identity = 94/230 (40.87%), Postives = 150/230 (65.22%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M+K+RE     + +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E M+K+RE     + +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E G  P   +T QFNFKFN   DM + +S++LL  SG+ F + ++ GID   FAEL + +G+V+ +N+ W+ FH  +D+ Y++K++T  + +P+   +F  +L ++FP   D+K L+   +    GLQE++  L ++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSR-LPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
Match: sp|Q3KQ85|CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis OX=8355 GN=cnot7 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.449e-59
Identity = 101/230 (43.91%), Postives = 153/230 (66.52%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL + MK++R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAELF+ +G+V+ E + W+ FH  +D+ Y++KI+T    +P+  QDF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEVEQDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
Match: sp|Q08BM8|CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio OX=7955 GN=cnot7 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.399e-58
Identity = 100/230 (43.48%), Postives = 152/230 (66.09%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MK++R+ +++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+   FAEL + +G+V+ E + W+ FH  +D+ Y++KI++  K +PD   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSK-LPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
Match: sp|Q60809|CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus OX=10090 GN=Cnot7 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.463e-58
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
Match: sp|Q3ZC01|CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.463e-58
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
Match: sp|Q9UIV1|CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens OX=9606 GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 1.864e-58
Identity = 101/230 (43.91%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E MKK+R+  ++   VA+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + ++ GI+ + FAEL + +G+V+ E + W+ FH  +D+ Y++KI+T    +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTN-SNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
Match: D5JG47 (CCR4-NOT transcription complex subunit 7 OS=Dugesia japonica OX=6161 GN=CNOT-7 PE=2 SV=1)

HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0
Identity = 341/382 (89.27%), Postives = 364/382 (95.29%), Query Frame = 2

Query:   44 MVNECIQMYPNEQYGNSYSNSHYRKERXXXXXXXXXXXXXXXXXQTRRTRHQTPKNHQSNPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLYAVVXXXXXXXXXXXXXXXXXXXXGNATPDEETNSNNDES 1189
            MVNECIQMYP EQ+ N+Y+N HYRKERSMTLSGSSSDS NN+KSQ+RR +HQTPKN Q+NPYEYQNY +SRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDY SPLDLQYSNVKINNDLLKPIQIGFSFFD+ G APD+QSTIQFNFKFNSNTDMGN+ESL+LLKRSGIDFDQL+KNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMP+ F DFSELLQIYFPKTIDLKTLV+KTRVQHCGLQELSKMLKVERRG QHQAGSDSRLTGESYFKF+L+YMDCEIKPEWYNMIFGMNF  GN++NLY  V SPD+++ENSSESSRSSP+SGNATPDEETNSNNDES
Sbjct:    1 MVNECIQMYPTEQFSNNYTNPHYRKERSMTLSGSSSDSNNNFKSQSRRNKHQTPKN-QNNPYEYQNYSSSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYASPLDLQYSNVKINNDLLKPIQIGFSFFDDQGNAPDEQSTIQFNFKFNSNTDMGNNESLDLLKRSGIDFDQLEKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPNTFSDFSELLQIYFPKTIDLKTLVIKTRVQHCGLQELSKMLKVERRGAQHQAGSDSRLTGESYFKFILHYMDCEIKPEWYNMIFGMNF--GNNSNLYPPVQSPDDHYENSSESSRSSPYSGNATPDEETNSNNDES 379

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
Match: A0A094ZIB1 (CCR4-NOT transcription complex subunit 7 OS=Schistosoma haematobium OX=6185 GN=MS3_01870 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 8.689e-79
Identity = 125/276 (45.29%), Postives = 189/276 (68.48%), Query Frame = 2

Query:  245 PNSRNIYSRHSDSS---VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNF-PTGNS 1060
            PN+    +   DSS   V +++A N  EGM+ +R   +    VA+DTEFPGV+ K+  +Y +  +  Y N+K+N D+LKPIQIGFSFFDE+G   D  ST+QFN K+N + +M   +S++LL+ SGIDFD+L + GI+   FAE FL +GL +N+ +TW+GFH  +D+AY++KI T W  MPDNF +F +LL I+FP+ +DLK+++ + +    GLQEL+ +++V R G QHQAGSD+ LTGE++F+F+  +   +I     N+++G+N+ P G S
Sbjct:   78 PNNITALTVPQDSSQVRVWDIWAHNFHEGMRLVRRLVRECQYVAVDTEFPGVVAKVFGEYANSFEQAYHNIKVNIDMLKPIQIGFSFFDESGQTVDSVSTVQFNIKWNVDNEMHAADSIQLLEVSGIDFDKLKRTGIELSDFAEAFLTSGLPLNDKITWIGFHSAYDFAYLMKICTDWMRMPDNFLEFQKLLLIFFPRIVDLKSMMSEHKFPKSGLQELADLMRVPRIGLQHQAGSDAMLTGETFFRFLEEHSGGKIDQRVLNLVYGLNYCPNGVS 353

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
Match: A0A419PX09 (CCR4-NOT transcription complex subunit 7 OS=Clonorchis sinensis OX=79923 GN=cnot7 PE=4 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.581e-78
Identity = 127/292 (43.49%), Postives = 192/292 (65.75%), Query Frame = 2

Query:  194 HQTPKNHQS--NPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNF-PTGNS 1060
            HQ    H S  +P    + P      + H    V +V+A N  EGM+ LR+  +    VA+DTEFPGV+ K+  +Y +  +  Y N+K+N D++KPIQIGFSFF++ G    D ST+QFN K+N + D    +S++LL  SGIDFD+L +NGI+   FAE F+ +GL +N+ +TW+GFH  +D+AY++KI T WK+MPDNFQ+F + L I+FP+ +DLK ++ + R    GLQEL+ +++V R G +HQAGSD+ LTGE++F+F+  +   +I     N+++G+N+ P G S
Sbjct:   72 HQNGHLHHSAQHPTHLDHSPLPHGHTTDHFHRRVWDVWAPNFHEGMQLLRQLGRECRYVAVDTEFPGVVAKVFGEYANSFEQAYHNIKVNIDMMKPIQIGFSFFNDRGQTVGDVSTVQFNIKWNVDNDTYADDSIKLLAFSGIDFDKLKRNGIELNDFAEAFIASGLALNDRITWIGFHSAYDFAYMMKICTDWKQMPDNFQEFQKRLLIFFPRIVDLKAMMSEHRFPKSGLQELADLMRVPRIGLRHQAGSDAMLTGETFFRFLEEHGGGKIDQRVVNLVYGLNYCPNGVS 363

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
Match: A0A3P6VE89 (Uncharacterized protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS4273 PE=4 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.184e-78
Identity = 129/313 (41.21%), Postives = 201/313 (64.22%), Query Frame = 2

Query:  182 RRTRHQTPKNHQSNPYEY------QNYPNSRNIYSRHSDSS-------VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLYAVV 1081
            + +RH    +H  +P +Y      Q   N  N  + H  S+       V +V+A N  EGM+ +R  ++ S  VA+DTEFPGV+ K+  +Y +  +  Y N+K+N D+L+PIQIGFSFF E G + D  ST+QFN K+N + +    +S++LL+  GIDF++L  NG++ + FAE FL +GL +NEN+TW+GFH  +D+AY++KI T W +MP+NF +F ++L I+FP+ IDLK ++ + +    GLQEL+  L V R G QHQAGSD+ LTGE++F+F+  + D +++    N+++G+N+    S N +  V
Sbjct:   60 QHSRHPHSASHLGHPLQYHHGSHPQGLHNISNPSNCHVPSNGFPQMVRVWDVWAHNFQEGMRLVRRLARNSRFVAVDTEFPGVVAKVFGEYTNSFEQAYHNIKVNIDMLRPIQIGFSFFGERGQSVDLVSTVQFNLKWNVDNETHAADSIQLLELCGIDFEKLKMNGVELQEFAEAFLASGLALNENITWIGFHSAYDFAYMMKICTDWLKMPENFVEFQKMLTIFFPRIIDLKAMMNEHKFLKGGLQELADALHVPRIGLQHQAGSDAMLTGETFFRFLEEHSDGKLESHIVNLVYGLNYCPNGSTNTFMHV 372

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
Match: A0A0X3PSU6 (CCR4-NOT transcription complex subunit 7 OS=Schistocephalus solidus OX=70667 GN=CNOT7 PE=4 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.929e-78
Identity = 124/310 (40.00%), Postives = 202/310 (65.16%), Query Frame = 2

Query:  182 RRTRHQTPKNHQSNPYEYQNYPNSRNIYSRHSDSS-------------VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLY 1072
            + +RH    +H  +P +Y +  + + +++  + S+             V +V+A N  EGM+ +R  ++ S  VA+DTEFPGV+ K+  +Y +  +  Y N+K+N D+L+PIQIGFSFF E G + D  ST+QFN K+N + +    +S++LL+  GIDF++L  NG++ + FAE FL +GL +NEN+TW+GFH  +D+AY++KI T W +MP+NF +F ++L I+FP+ IDLK ++ + +    GLQEL+  L V R G QHQAGSD+ LTGE++F+F+  + D +++    N+++G+N+    S N +
Sbjct:   60 QHSRHPHGPSHLGHPLQYHHGSHPQGLHNLSNPSNCHVPSNGFPQMVRVWDVWAHNFQEGMRLVRRLARNSRFVAVDTEFPGVVAKVFGEYTNSFEQAYHNIKVNIDMLRPIQIGFSFFGERGQSVDLVSTVQFNLKWNVDNETHAADSIQLLELCGIDFEKLKMNGVELQEFAEAFLASGLALNENITWIGFHSAYDFAYMMKICTDWLKMPENFVEFQKMLAIFFPRIIDLKAMMNEHKFLKGGLQELADALHVPRIGLQHQAGSDAMLTGETFFRFLEEHSDGKLESHIVNLVYGLNYCPNGSTNTF 369

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Cavefish
Match: cnot8 (CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:103026084])

HSP 1 Score: 194.512 bits (493), Expect = 1.219e-57
Identity = 94/230 (40.87%), Postives = 154/230 (66.96%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A N+ E M+K+R+  +    +A+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E+G  P   +T QFNFKFN   DM + +S++LL+ SG+ F + ++ GID   FAEL + +GLV+ EN+ W+ FH  +D+ Y++K++T  + +P+   +F ++L ++FP   D+K L+   +    GLQE++  L+++R G QHQAGSDS LTG ++F+
Sbjct:   12 ICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDAR-LPEEEHEFFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Cavefish
Match: cnot7 (CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:103042639])

HSP 1 Score: 194.512 bits (493), Expect = 1.351e-57
Identity = 98/230 (42.61%), Postives = 150/230 (65.22%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E +K++R+  ++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKFN   DM   +S+ELL  SGI F + +  GI+   FAEL + +G+V+ E + W+ FH  +D+ Y++KI++  K +P+   DF E+L+++FP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWASNLDEELKRIRQVIRKYNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEDEGIETLYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSK-LPEEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Yeast
Match: POP2 (RNase of the DEDD superfamily; subunit of the Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation [Source:SGD;Acc:S000005335])

HSP 1 Score: 122.479 bits (306), Expect = 9.647e-31
Identity = 66/186 (35.48%), Postives = 110/186 (59.14%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDD-QSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDL 841
            V +V+  NL      +R+   +   V+I TEF G + +    + S +D  Y  ++ N D L PIQ+G S  D NG  PD+  ST QFNF+F+   ++ + ESLELL++SGI+F++ +  GID   F++L + +GL+M++++TW+ +H  +D  +++ I+     MP+N +DF   +  Y P   DL
Sbjct:  160 VRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPDNGPSTWQFNFEFDPKKEIMSTESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMN-DSMPNNKEDFEWWVHQYMPNFYDL 344

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Nematostella
Match: EDO37177 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SGF4])

HSP 1 Score: 192.971 bits (489), Expect = 1.298e-57
Identity = 98/231 (42.42%), Postives = 148/231 (64.07%), Query Frame = 2

Query:  284 SVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
             + +V+  NL E   K+R        VA+DTEFPGV+ +   ++ S  + Q+  ++ N DLLK IQ+G SF++++G  P D +T QFNFKFN   DM   +S++LL RSGI F Q ++ GID   FAEL + +GLV+ + + W+ FH  +D+ Y++K++T  + +     +F ELL++YFPK  D+K L+   +    GLQE+S++L +ER G QHQAGSD  LTG ++FK
Sbjct:    8 GIRDVWQGNLEEEFAKIRNIIDEYPYVAMDTEFPGVVARPIGEFRSTAEYQFQLLRCNVDLLKIIQLGMSFYNDHGQQPSDGATWQFNFKFNLTEDMYAQDSIDLLNRSGIQFKQHEEEGIDVNDFAELLITSGLVLRDEVRWLSFHSAYDFGYLIKVLTA-QNLSSEESEFFELLKLYFPKIYDVKYLMKSCKSLKGGLQEVSELLDLERIGPQHQAGSDCLLTGNAFFK 237

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Medaka
Match: cnot8 (CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:101160578])

HSP 1 Score: 196.052 bits (497), Expect = 2.926e-58
Identity = 96/236 (40.68%), Postives = 156/236 (66.10%), Query Frame = 2

Query:  269 RHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            + S   +  V+A N+ E M+K+R+  +    VA+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E+G  P   +T QFNFKFN   DM + +S++LL+ SG+ F + ++ GID   FAEL + +GLV+ EN+ W+ FH  +D+ Y++K++T  + +P+   +F ++L ++FP   D+K L+   +    GLQE++  L+++R G QHQAGSDS LTG ++F+
Sbjct:    6 QDSSQMICEVWASNVGEEMRKIRQIIQSYNYVAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDAR-LPEEEHEFFQILNLFFPAIYDVKYLMKSCKSLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Medaka
Match: cnot7 (CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:101165240])

HSP 1 Score: 193.356 bits (490), Expect = 3.608e-57
Identity = 96/230 (41.74%), Postives = 149/230 (64.78%), Query Frame = 2

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E +K++R   ++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKF+   DM   +S+ELL  SGI F + ++ GI+   FAEL + +G+V+ + + W+ FH  +D+ Y++KI++    +P+   DF E+L++YFP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWASNLEEELKRIRHVIRKYNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFSLTEDMYAQDSIELLTTSGIQFKKHEEEGIETLFFAELLMTSGVVLCDGIKWLSFHSGYDFGYLIKILSN-ANLPEEEADFFEILRLYFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

Query:  287 VMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFK 976
            +  V+A NL E +K++R   ++   +A+DTEFPGV+ +   ++ S  D QY  ++ N DLLK IQ+G +F +E G  P   ST QFNFKF+   DM   +S+ELL  SGI F + ++ GI+   FAEL + +G+V+ + + W+ FH  +D+ Y++KI++    +P+   DF E+L++YFP   D+K L+   +    GLQE+++ L++ER G QHQAGSDS LTG ++FK
Sbjct:   12 ICEVWASNLEEELKRIRHVIRKYNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFSLTEDMYAQDSIELLTTSGIQFKKHEEEGIETLFFAELLMTSGVVLCDGIKWLSFHSGYDFGYLIKILSN-ANLPEEEADFFEILRLYFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Medaka
Match: cnot8 (CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:101160578])

HSP 1 Score: 165.622 bits (418), Expect = 1.770e-46
Identity = 90/233 (38.63%), Postives = 142/233 (60.94%), Query Frame = 2

Query:  275 SDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQ-----HQAGSDSRLT 958
            S   +  V+A N+ E M+K+R+  +    VA+DTEFPGV+V+   ++ S +D QY  ++ N DLLK IQ+G +F +E+G  P   +T QFNFKFN   DM + +S++LL+ SG+ F + ++ GID   FAEL + +GLV+ EN+ W+ FH  +D+ Y++K++T    +P+   +F ++L ++FP   D+K L     ++ C      K LKV   GH+     H  G+ SRLT
Sbjct:    8 SSQMICEVWASNVGEEMRKIRQIIQSYNYVAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTD-ARLPEEEHEFFQILNLFFPAIYDVKYL-----MKSC------KSLKVRPAGHRVYCFLHPRGTWSRLT 228

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Planmine SMEST
Match: SMESG000021174.1 (SMESG000021174.1)

HSP 1 Score: 714.531 bits (1843), Expect = 0.000e+0
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 2

Query:   44 MVNECIQMYPNEQYGNSYSNSHYRKERXXXXXXXXXXXXXXXXXQTRRTRHQTPKNHQSNPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLYAVVXXXXXXXXXXXXXXXXXXXXGNATPDEETNSNNDESA 1192
            MVNECIQMYPNEQYGNSYSNSHYRKERSMTLSGSSSDSTNNYKSQTRRTRHQTPKNHQSNPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLYAVVPSPDENFENSSESSRSSPFSGNATPDEETNSNNDESA
Sbjct:    1 MVNECIQMYPNEQYGNSYSNSHYRKERSMTLSGSSSDSTNNYKSQTRRTRHQTPKNHQSNPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLYAVVPSPDENFENSSESSRSSPFSGNATPDEETNSNNDESA 383

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Planmine SMEST
Match: SMESG000023058.1 (SMESG000023058.1)

HSP 1 Score: 374.015 bits (959), Expect = 2.228e-127
Identity = 175/256 (68.36%), Postives = 212/256 (82.81%), Query Frame = 2

Query:  278 DSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNF 1045
            +SSVM+V+A+NL+EGMKKL E +K ST VAID+EFPG++VK+ +D +S +D +Y NVKINNDLL PIQIGFSFFDENG A  DQST+QFNFKF++ TD GN ESLELL+R+GI+F  L KNGI+   F E FL T L MN NLTWVGFH NHDWAY+LKI+TGW+EMP N +DFS LL  +FPKTIDLKT+V+K    HCGLQ LSK LKVER G QHQAGSD+RLTGESYFKF+ NYM+C++K +WYN+IFG+N+
Sbjct:   22 NSSVMDVFANNLVEGMKKLSELAKHSTFVAIDSEFPGIVVKIKEDSLSLIDNEYLNVKINNDLLNPIQIGFSFFDENGKAVTDQSTVQFNFKFDTKTDRGNPESLELLRRAGINFKALQKNGIEMYSFGEHFLSTDLAMNRNLTWVGFHANHDWAYMLKILTGWREMPGNHKDFSMLLSAFFPKTIDLKTVVIKKFGHHCGLQNLSKRLKVERHGVQHQAGSDARLTGESYFKFICNYMNCKMKSDWYNLIFGLNY 277

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Planmine SMEST
Match: SMESG000023061.1 (SMESG000023061.1)

HSP 1 Score: 309.301 bits (791), Expect = 5.024e-103
Identity = 144/210 (68.57%), Postives = 174/210 (82.86%), Query Frame = 2

Query:  416 ISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNF 1045
            +S +D +Y NVKINNDLL PIQIGFSFFDENG A  DQST+QFNFKF++ TD+GN +SLELL+R+GI+F+ L +NGI+   F E FL T L MN NLTWVGFH NHDWAY+LKI+TGW+EMP N +DFS LL  +FPKTIDLKT+V+K    HCGLQ LSK LKVER G QHQAGSD+RLTGESYFKF+ NYM+C++K +WYN+IFG+N+
Sbjct:    1 MSLIDNEYLNVKINNDLLNPIQIGFSFFDENGKAVTDQSTVQFNFKFDTKTDIGNPKSLELLRRAGINFNALQQNGIEMYSFGEHFLSTDLAMNRNLTWVGFHANHDWAYMLKILTGWREMPGNHKDFSMLLSAFFPKTIDLKTVVIKKFGHHCGLQNLSKRLKVERHGLQHQAGSDARLTGESYFKFICNYMNCKMKSDWYNLIFGLNY 210

[Close]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Planmine SMEST
Match: SMESG000081831.1 (SMESG000081831.1)

HSP 1 Score: 270.011 bits (689), Expect = 6.913e-84
Identity = 131/292 (44.86%), Postives = 200/292 (68.49%), Query Frame = 2

Query:  194 HQTPKNHQSNPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREFSKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFSFFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNGIDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQDFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGSDSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANL 1069
            HQ P +H  N     N  ++RN ++      V  VY +NLLEG + +R+  K + +VAIDTEFPGV+ +++ +Y S   L Y N+K N DL+KPIQIGFSFF++NG   +  +T+QFN K++  T++   ES+ LL+ SGIDF +   +GI+ + FAE+FL +GL +N+ +TW+GFHC +DWAY++KI T   +MP++ ++FS LL +YFPKTID+KT++    +   GLQ+L++ L VER G QHQAGSD++LTG+++F F   Y +  I  ++ N+I+G+N+   + AN+
Sbjct:   72 HQIPSSHYRNGN--HNLSSTRNPHNT-GYGGVYEVYNNNLLEGSRLIRQLGKTNDIVAIDTEFPGVVCRVNGEYSSTTSLSYHNIKCNTDLMKPIQIGFSFFNQNGEQSEVNATVQFNLKWDMETEVFAEESIALLENSGIDFHEHKVHGIEIQDFAEVFLASGLPLNDRITWIGFHCAYDWAYMIKICTNLPDMPESHEEFSALLLLYFPKTIDIKTIMTDKNLPKSGLQDLARSLNVERIGVQHQAGSDAKLTGDTFFNFFKIYCNGLIDEKYINLIYGLNYCPTSGANI 360

The following BLAST results are available for this feature:

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Human
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Celegans
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Zebrafish
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Xenopus
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Mouse
BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Cavefish
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Sea Lamprey
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Yeast
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Nematostella
BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Medaka
BLAST of CCR4-NOT transcription complex subunit 7 vs. Planmine SMEST

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CNOT7	1.142e-59	43.91	CCR4-NOT transcription complex subunit 7 [Source:H...	[more]
CNOT7	3.881e-59	43.91	CCR4-NOT transcription complex subunit 7 [Source:H...	[more]
CNOT8	2.755e-55	40.87	CCR4-NOT transcription complex subunit 8 [Source:H...	[more]
CNOT8	2.755e-55	40.87	CCR4-NOT transcription complex subunit 8 [Source:H...	[more]
CNOT8	2.755e-55	40.87	CCR4-NOT transcription complex subunit 8 [Source:H...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ccf-1	1.173e-46	36.03	CCR4-NOT transcription complex subunit 7 [Source:...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Pop2	4.108e-57	39.76	gene:FBgn0036239 transcript:FBtr0300272	[more]
Pop2	4.200e-57	39.76	gene:FBgn0036239 transcript:FBtr0344758	[more]
Pop2	1.093e-56	41.20	gene:FBgn0036239 transcript:FBtr0076058	[more]
Pop2	1.106e-56	41.20	gene:FBgn0036239 transcript:FBtr0076059	[more]
Pop2	1.106e-56	41.20	gene:FBgn0036239 transcript:FBtr0076060	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cnot7	1.853e-59	43.48	CCR4-NOT transcription complex, subunit 7 [Source:...	[more]
cnot7	1.853e-59	43.48	CCR4-NOT transcription complex, subunit 7 [Source:...	[more]
cnot7	1.853e-59	43.48	CCR4-NOT transcription complex, subunit 7 [Source:...	[more]
cnot8	1.775e-57	40.87	CCR4-NOT transcription complex, subunit 8 [Source:...	[more]
cnot8	1.775e-57	40.87	CCR4-NOT transcription complex, subunit 8 [Source:...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4


Match Name	E-value	Identity	Description
nadk2	4.503e-58	43.04	NAD kinase 2, mitochondrial [Source:Xenbase;Acc:XB...	[more]
cnot8	2.152e-55	40.87	CCR4-NOT transcription complex subunit 8 [Source:N...	[more]
cnot8	3.140e-55	40.87	CCR4-NOT transcription complex subunit 8 [Source:N...	[more]
nadk2	8.433e-32	33.91	NAD kinase 2, mitochondrial [Source:Xenbase;Acc:XB...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Cnot7	2.091e-59	43.91	CCR4-NOT transcription complex, subunit 7 [Source:...	[more]
Cnot7	2.091e-59	43.91	CCR4-NOT transcription complex, subunit 7 [Source:...	[more]
Cnot7	2.091e-59	43.91	CCR4-NOT transcription complex, subunit 7 [Source:...	[more]
Cnot8	1.758e-55	40.87	CCR4-NOT transcription complex, subunit 8 [Source:...	[more]
Cnot8	1.758e-55	40.87	CCR4-NOT transcription complex, subunit 8 [Source:...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q3KQ85\|CNOT7_XENLA	3.449e-59	43.91	CCR4-NOT transcription complex subunit 7 OS=Xenopu...	[more]
sp\|Q08BM8\|CNOT7_DANRE	1.399e-58	43.48	CCR4-NOT transcription complex subunit 7 OS=Danio ...	[more]
sp\|Q60809\|CNOT7_MOUSE	1.463e-58	43.91	CCR4-NOT transcription complex subunit 7 OS=Mus mu...	[more]
sp\|Q3ZC01\|CNOT7_BOVIN	1.463e-58	43.91	CCR4-NOT transcription complex subunit 7 OS=Bos ta...	[more]
sp\|Q9UIV1\|CNOT7_HUMAN	1.864e-58	43.91	CCR4-NOT transcription complex subunit 7 OS=Homo s...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
D5JG47	0.000e+0	89.27	CCR4-NOT transcription complex subunit 7 OS=Dugesi...	[more]
A0A094ZIB1	8.689e-79	45.29	CCR4-NOT transcription complex subunit 7 OS=Schist...	[more]
A0A419PX09	2.581e-78	43.49	CCR4-NOT transcription complex subunit 7 OS=Clonor...	[more]
A0A3P6VE89	3.184e-78	41.21	Uncharacterized protein OS=Dibothriocephalus latus...	[more]
A0A0X3PSU6	4.929e-78	40.00	CCR4-NOT transcription complex subunit 7 OS=Schist...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
cnot8	1.219e-57	40.87	CCR4-NOT transcription complex subunit 8 [Source:N...	[more]
cnot7	1.351e-57	42.61	CCR4-NOT transcription complex subunit 7 [Source:N...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
POP2	9.647e-31	35.48	RNase of the DEDD superfamily; subunit of the Ccr4...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO37177	1.298e-57	42.42	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4


Match Name	E-value	Identity	Description
cnot8	2.926e-58	40.68	CCR4-NOT transcription complex subunit 8 [Source:N...	[more]
cnot7	3.608e-57	41.74	CCR4-NOT transcription complex subunit 7 [Source:N...	[more]
cnot7	3.608e-57	41.74	CCR4-NOT transcription complex subunit 7 [Source:N...	[more]
cnot8	1.770e-46	38.63	CCR4-NOT transcription complex subunit 8 [Source:N...	[more]

BLAST of CCR4-NOT transcription complex subunit 7 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4


Match Name	E-value	Identity	Description
SMESG000021174.1	0.000e+0	100.00	SMESG000021174.1	[more]
SMESG000023058.1	2.228e-127	68.36	SMESG000023058.1	[more]
SMESG000023061.1	5.024e-103	68.57	SMESG000023061.1	[more]
SMESG000081831.1	6.913e-84	44.86	SMESG000081831.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30007616 ID=SMED30007616|Name=CCR4-NOT transcription complex subunit 7|organism=Schmidtea mediterranea sexual|type=transcript|length=1615bp
ACATTTAAAAATTAAAAAAAAAATATCAGTTTAAATTAATGAAATGGTTA
ACGAATGTATACAAATGTATCCAAATGAACAATATGGCAATAGTTATTCT
AATTCACACTATCGTAAAGAACGTTCTATGACGCTTTCAGGAAGTTCAAG
TGATAGTACCAATAATTATAAATCTCAGACTCGTCGAACTAGACATCAAA
CGCCGAAAAATCATCAGTCTAATCCATACGAATATCAAAATTATCCAAAT
TCTCGAAATATCTACTCTCGTCACTCAGATTCATCCGTAATGAATGTATA
TGCTGATAATTTACTTGAAGGCATGAAAAAGTTACGTGAGTTTTCTAAGC
GAAGTACAGTTGTAGCTATAGATACAGAATTTCCGGGTGTGATTGTTAAA
CTGCATCAGGATTATATAAGTCCTTTAGATTTACAATATTCAAATGTTAA
AATTAACAACGATTTATTGAAGCCTATTCAAATAGGGTTCAGTTTTTTCG
ATGAAAATGGAATTGCGCCAGATGATCAATCGACTATACAATTTAATTTT
AAGTTTAACTCAAATACAGATATGGGAAATCACGAGTCATTAGAGCTTCT
TAAACGTTCAGGAATTGATTTTGATCAACTGGATAAAAATGGAATTGATC
CAGAATTATTTGCAGAGTTGTTTTTGATTACAGGGCTAGTAATGAATGAA
AATCTTACGTGGGTTGGATTTCACTGTAACCACGATTGGGCTTATATTCT
TAAAATTATCACTGGGTGGAAAGAAATGCCAGATAATTTCCAAGATTTTT
CAGAACTGCTGCAAATCTATTTTCCAAAGACGATTGATCTCAAGACTTTA
GTTTTAAAGACTCGGGTTCAACACTGTGGACTGCAAGAGCTATCAAAAAT
GCTAAAAGTTGAACGTCGTGGGCATCAGCATCAAGCAGGAAGTGATTCCA
GACTAACGGGCGAGTCTTATTTTAAGTTTGTCCTCAATTACATGGACTGT
GAAATTAAACCCGAGTGGTATAATATGATATTTGGGATGAATTTTCCTAC
AGGAAATTCTGCAAATCTTTATGCAGTAGTTCCATCGCCAGATGAGAACT
TTGAAAATTCTTCTGAATCATCTAGATCATCACCTTTTAGTGGCAACGCT
ACACCAGATGAGGAAACCAACTCGAATAACGATGAATCTGCTTAGAGATC
ATTGTAGTTTTTAATCAGAGATTTGGCAGCCTCGTAAAGTTGTATATAAC
TATTAAAATTAATCGATAATTTCCACATTGTGATTGTACGCAGCTGAATG
CGAATATATGTTCTCTAGTTTCTCAATCTACGCTTCACTTGTTAGCTCTT
CTCTTTTTCATCATTTATCTCTGCCCGAACACTTTCGATTTTCTTAATTA
CTCTGATTTCGTACGTATTATCTAGTGTGAATGTGATTTTTTTCTCTAAT
CAATATTGTATTTCTATCTTTTTTTGTGGATAAAATTTGTTGAGAACTTC
TGGTGGGTTCCTTAGTTAGATTCAAATGTAGCTCTCAGGTCGTGAGGGCT
TTCTCTGGTGTCAACCGATGTACGGACAAGTTTGATTGCTCTATATATAT
ATATATATATAATTT

protein sequence of SMED30007616-orf-1

>SMED30007616-orf-1 ID=SMED30007616-orf-1|Name=SMED30007616-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=384bp
MVNECIQMYPNEQYGNSYSNSHYRKERSMTLSGSSSDSTNNYKSQTRRTR
HQTPKNHQSNPYEYQNYPNSRNIYSRHSDSSVMNVYADNLLEGMKKLREF
SKRSTVVAIDTEFPGVIVKLHQDYISPLDLQYSNVKINNDLLKPIQIGFS
FFDENGIAPDDQSTIQFNFKFNSNTDMGNHESLELLKRSGIDFDQLDKNG
IDPELFAELFLITGLVMNENLTWVGFHCNHDWAYILKIITGWKEMPDNFQ
DFSELLQIYFPKTIDLKTLVLKTRVQHCGLQELSKMLKVERRGHQHQAGS
DSRLTGESYFKFVLNYMDCEIKPEWYNMIFGMNFPTGNSANLYAVVPSPD
ENFENSSESSRSSPFSGNATPDEETNSNNDESA*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0030014	CCR4-NOT complex
GO:0005634	nucleus

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002032	epidermal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR039637	CNOT7/CNOT8/Pop2
IPR012337	RNaseH-like_sf
IPR006941	RNase_CAF1

Vocabulary: **molecular function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004535	poly(A)-specific ribonuclease activity

Vocabulary: **biological process**
Term	Definition
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 86..201 e-value: 4.0E-7 score: 29.5
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 217..307 e-value: 1.2E-8 score: 34.5
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 78..332 e-value: 1.3E-79 score: 269.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	PANTHER	PTHR10797:SF0	POP2, ISOFORM E	coord: 78..343
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 78..343
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 82..315

Main menu

CCR4-NOT transcription complex subunit 7

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

blazegraph-runner