NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

Overview
NameNADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Smed IDSMED30007568
Length (bp)655
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (SMED30007568) t-SNE clustered cells

Violin plots show distribution of expression levels for NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (SMED30007568) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (SMED30007568) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (SMED30007568) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30007568

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30007568SMESG000081864.1 dd_Smed_v4_2402_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30007568SMESG000081864.1 dd_Smed_v4_2402_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30007568SMESG000081864.1 dd_Smed_v4_2402_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Human
Match: NDUFS1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707])

HSP 1 Score: 283.878 bits (725), Expect = 5.063e-91
Identity = 141/193 (73.06%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   35 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 220
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Human
Match: NDUFS1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707])

HSP 1 Score: 283.878 bits (725), Expect = 5.063e-91
Identity = 141/193 (73.06%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   35 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 220
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Human
Match: NDUFS1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707])

HSP 1 Score: 283.493 bits (724), Expect = 5.270e-91
Identity = 141/193 (73.06%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   21 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Human
Match: NDUFS1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707])

HSP 1 Score: 283.493 bits (724), Expect = 5.270e-91
Identity = 141/193 (73.06%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   21 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Human
Match: NDUFS1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707])

HSP 1 Score: 283.493 bits (724), Expect = 5.270e-91
Identity = 141/193 (73.06%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   21 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Celegans
Match: nuo-5 (NADH Ubiquinone Oxidoreductase [Source:UniProtKB/TrEMBL;Acc:Q9N4Y8])

HSP 1 Score: 289.656 bits (740), Expect = 9.025e-94
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 1 
Query:   73 QFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            Q  R  + A    P K+EVF+DD  V  DPGMT+LQACA+ GV+IPRFCYH+RLSIAGNCRMCLVEVEKS+KP+ASCA PV  GM++KTNS   KKAREGVMEF+L NHPLDCPICDQGGECDLQDQ+M FGSDR R + + + GKRA+EDKNIGPLVKT+MTRCI CT   RFA+E+A   D GTTGRG D+Q+
Sbjct:   16 QQKRSLSVAAPAPPKKVEVFIDDKKVLVDPGMTILQACALVGVDIPRFCYHDRLSIAGNCRMCLVEVEKSVKPVASCAMPVMNGMKVKTNSDFVKKAREGVMEFMLNNHPLDCPICDQGGECDLQDQAMNFGSDRGR-LQSRFDGKRALEDKNIGPLVKTVMTRCIQCTRCVRFANEVAAFPDFGTTGRGQDLQI 209
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Fly
Match: ND-75 (gene:FBgn0017566 transcript:FBtr0071180)

HSP 1 Score: 318.546 bits (815), Expect = 7.560e-105
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 1 
Query:  112 PSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            P KIEVFVDDIPVQ  PG TVLQA A  GVEIPRFCYHERL++AGNCRMCLVEVEKS KP+A+CA PV KG RIKTNS +T+KAREGVMEFLL+NHPLDCPICDQGGECDLQDQ+M FGSDRSRF D  Y GKRAVEDK+IGPLVKTIMTRCIHCT   RFASEIAGV+DLGTTGRG DMQ+
Sbjct:   39 PEKIEVFVDDIPVQVVPGTTVLQAAAQIGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDINYTGKRAVEDKDIGPLVKTIMTRCIHCTRCVRFASEIAGVDDLGTTGRGNDMQI 220
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Fly
Match: ND-75 (gene:FBgn0017566 transcript:FBtr0071181)

HSP 1 Score: 318.546 bits (815), Expect = 7.560e-105
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 1 
Query:  112 PSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            P KIEVFVDDIPVQ  PG TVLQA A  GVEIPRFCYHERL++AGNCRMCLVEVEKS KP+A+CA PV KG RIKTNS +T+KAREGVMEFLL+NHPLDCPICDQGGECDLQDQ+M FGSDRSRF D  Y GKRAVEDK+IGPLVKTIMTRCIHCT   RFASEIAGV+DLGTTGRG DMQ+
Sbjct:   39 PEKIEVFVDDIPVQVVPGTTVLQAAAQIGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDINYTGKRAVEDKDIGPLVKTIMTRCIHCTRCVRFASEIAGVDDLGTTGRGNDMQI 220
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Zebrafish
Match: ino80db (INO80 complex subunit Db [Source:NCBI gene;Acc:563304])

HSP 1 Score: 288.115 bits (736), Expect = 4.750e-93
Identity = 136/188 (72.34%), Postives = 155/188 (82.45%), Query Frame = 1 
Query:   94 TAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            T+V    + +EVFVD  PV  +PG TVLQAC   GV+IPRFCYH+RLS+AGNCRMCLVE+E++ KP+A+CA PV KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF +    GKRAVEDKNIGPL+KTIMTRCI CT   RFASE+AGV DLGTTGRG DMQ+
Sbjct:   27 TSVRAASNMVEVFVDGKPVMVEPGTTVLQACEKVGVQIPRFCYHDRLSVAGNCRMCLVEIERAPKPVAACAMPVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGTDRSRFTE----GKRAVEDKNIGPLIKTIMTRCIQCTRCVRFASEVAGVEDLGTTGRGNDMQI 210
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Zebrafish
Match: ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478])

HSP 1 Score: 288.115 bits (736), Expect = 4.750e-93
Identity = 136/188 (72.34%), Postives = 155/188 (82.45%), Query Frame = 1 
Query:   94 TAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            T+V    + +EVFVD  PV  +PG TVLQAC   GV+IPRFCYH+RLS+AGNCRMCLVE+E++ KP+A+CA PV KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF +    GKRAVEDKNIGPL+KTIMTRCI CT   RFASE+AGV DLGTTGRG DMQ+
Sbjct:   27 TSVRAASNMVEVFVDGKPVMVEPGTTVLQACEKVGVQIPRFCYHDRLSVAGNCRMCLVEIERAPKPVAACAMPVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGTDRSRFTE----GKRAVEDKNIGPLIKTIMTRCIQCTRCVRFASEVAGVEDLGTTGRGNDMQI 210
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Zebrafish
Match: ino80db (INO80 complex subunit Db [Source:NCBI gene;Acc:563304])

HSP 1 Score: 270.396 bits (690), Expect = 6.631e-86
Identity = 136/223 (60.99%), Postives = 155/223 (69.51%), Query Frame = 1 
Query:   94 TAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLK-----------------------------------PIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            T+V    + +EVFVD  PV  +PG TVLQAC   GV+IPRFCYH+RLS+AGNCRMCLVE+E++ K                                   P+A+CA PV KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF +    GKRAVEDKNIGPL+KTIMTRCI CT   RFASE+AGV DLGTTGRG DMQ+
Sbjct:   27 TSVRAASNMVEVFVDGKPVMVEPGTTVLQACEKVGVQIPRFCYHDRLSVAGNCRMCLVEIERAPKVICVIERTMSMTLLLAHIQDCHQNTLLSPFVLHQQPVAACAMPVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGTDRSRFTE----GKRAVEDKNIGPLIKTIMTRCIQCTRCVRFASEVAGVEDLGTTGRGNDMQI 245
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Xenopus
Match: znf33b (zinc finger protein 33B [Source:Xenbase;Acc:XB-GENE-5846794])

HSP 1 Score: 281.182 bits (718), Expect = 3.555e-90
Identity = 142/199 (71.36%), Postives = 157/199 (78.89%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLK------PIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + +EVFVD  PV  +PG TVLQAC   GV+IPRFCYH+RLS+AGNCRMCLVE+EK+ K        A+CA PV KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF+D    GKRAVEDKNIGPLVKTIMTRCI CT   RFASE+AGV+DLGTTGRG DMQV
Sbjct:   21 VRTTATAA---SNLVEVFVDGKPVMVEPGTTVLQACEKVGVQIPRFCYHDRLSVAGNCRMCLVEIEKAPKVSLLLCSSAACAMPVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLD----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEVAGVDDLGTTGRGNDMQV 212
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Xenopus
Match: znf33b (zinc finger protein 33B [Source:Xenbase;Acc:XB-GENE-5846794])

HSP 1 Score: 276.174 bits (705), Expect = 2.993e-88
Identity = 139/218 (63.76%), Postives = 160/218 (73.39%), Query Frame = 1 
Query:    4 NLYKYYMTMLVKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            N +  +  ++++             +R  ATA     + +EVFVD  PV  +PG TVLQAC   GV+IPRFCYH+RLS+AGNCRMCLVE+EK+ K      + V KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF+D    GKRAVEDKNIGPLVKTIMTRCI CT   RFASE+AGV+DLGTTGRG DMQV
Sbjct:    5 NAFGGFSYLIIRRVLASATQNSKNNVRTTATAA---SNLVEVFVDGKPVMVEPGTTVLQACEKVGVQIPRFCYHDRLSVAGNCRMCLVEIEKAPKVSLLLCSSVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLD----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEVAGVDDLGTTGRGNDMQV 215
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Mouse
Match: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241])

HSP 1 Score: 288.5 bits (737), Expect = 4.562e-93
Identity = 144/208 (69.23%), Postives = 162/208 (77.88%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +K   I + N    ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:    6 IKRALIGLSNSPKGYVRTTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Mouse
Match: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241])

HSP 1 Score: 288.5 bits (737), Expect = 4.562e-93
Identity = 144/208 (69.23%), Postives = 162/208 (77.88%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +K   I + N    ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:    6 IKRALIGLSNSPKGYVRTTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Mouse
Match: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241])

HSP 1 Score: 140.969 bits (354), Expect = 1.704e-42
Identity = 87/190 (45.79%), Postives = 101/190 (53.16%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASE 594
            +K   I + N    ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K                                                     DQSM+FGSDRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASE
Sbjct:    6 IKRALIGLSNSPKGYVRTTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPK-----------------------------------------------------DQSMMFGSDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASE 135
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Mouse
Match: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241])

HSP 1 Score: 128.257 bits (321), Expect = 1.091e-37
Identity = 66/116 (56.90%), Postives = 80/116 (68.97%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVME 381
            +K   I + N    ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVME
Sbjct:    6 IKRALIGLSNSPKGYVRTTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVME 118
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Mouse
Match: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241])

HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-20
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCL 264
            +K   I + N    ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCL
Sbjct:    6 IKRALIGLSNSPKGYVRTTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCL 79
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. UniProt/SwissProt
Match: sp|Q94511|NDUS1_DROME (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Drosophila melanogaster OX=7227 GN=ND-75 PE=2 SV=3)

HSP 1 Score: 318.546 bits (815), Expect = 7.578e-104
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 1 
Query:  112 PSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            P KIEVFVDDIPVQ  PG TVLQA A  GVEIPRFCYHERL++AGNCRMCLVEVEKS KP+A+CA PV KG RIKTNS +T+KAREGVMEFLL+NHPLDCPICDQGGECDLQDQ+M FGSDRSRF D  Y GKRAVEDK+IGPLVKTIMTRCIHCT   RFASEIAGV+DLGTTGRG DMQ+
Sbjct:   39 PEKIEVFVDDIPVQVVPGTTVLQAAAQIGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAACAMPVMKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDINYTGKRAVEDKDIGPLVKTIMTRCIHCTRCVRFASEIAGVDDLGTTGRGNDMQI 220
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. UniProt/SwissProt
Match: sp|Q91VD9|NDUS1_MOUSE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 3.191e-92
Identity = 144/208 (69.23%), Postives = 162/208 (77.88%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +K   I + N    ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:    6 IKRALIGLSNSPKGYVRTTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. UniProt/SwissProt
Match: sp|Q66HF1|NDUS1_RAT (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.233e-91
Identity = 144/208 (69.23%), Postives = 161/208 (77.40%), Query Frame = 1 
Query:   34 VKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            VK   I +      ++R   TA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:    6 VKRALIGLSKSPKGYVRSTGTAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. UniProt/SwissProt
Match: sp|P15690|NDUS1_BOVIN (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS1 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.828e-91
Identity = 143/193 (74.09%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  TKKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   21 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKTKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. UniProt/SwissProt
Match: sp|Q0MQG2|NDUS1_PANTR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan troglodytes OX=9598 GN=NDUFS1 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.801e-90
Identity = 141/193 (73.06%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:   79 LRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +R  ATA     + IEVFVD   V  +PG TVLQAC   G++IPRFCYHERLS+AGNCRMCLVE+EK+ K +A+CA PV KG  I TNS  +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FG+DRSRF++    GKRAVEDKNIGPLVKTIMTRCI CT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:   21 VRTTATAA---SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSKKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE----GKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQV 206
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. TrEMBL
Match: A0A1I8FXG3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.339e-112
Identity = 159/181 (87.85%), Postives = 169/181 (93.37%), Query Frame = 1 
Query:  115 SKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +KIEVFVD  PVQCDPGMTVLQACA+AGVEIPRFCYHERLSIAGNCRMCLVEVEKS+KP+ASCA PV KGMR+KT+SPMT+KAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRF DN + GKRAVEDKNIGPLVKTIMTRCIHCT   RFASE+AGV DLGTTGRG DMQ+
Sbjct:   46 NKIEVFVDGNPVQCDPGMTVLQACALAGVEIPRFCYHERLSIAGNCRMCLVEVEKSIKPVASCAMPVMKGMRVKTDSPMTRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFTDNLHDGKRAVEDKNIGPLVKTIMTRCIHCTRCVRFASEVAGVEDLGTTGRGNDMQI 226
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. TrEMBL
Match: A0A267EU88 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014412g1 PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.628e-110
Identity = 159/181 (87.85%), Postives = 169/181 (93.37%), Query Frame = 1 
Query:  115 SKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +KIEVFVD  PVQCDPGMTVLQACA+AGVEIPRFCYHERLSIAGNCRMCLVEVEKS+KP+ASCA PV KGMR+KT+SPMT+KAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRF DN + GKRAVEDKNIGPLVKTIMTRCIHCT   RFASE+AGV DLGTTGRG DMQ+
Sbjct:   27 NKIEVFVDGNPVQCDPGMTVLQACALAGVEIPRFCYHERLSIAGNCRMCLVEVEKSIKPVASCAMPVMKGMRVKTDSPMTRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFTDNLHDGKRAVEDKNIGPLVKTIMTRCIHCTRCVRFASEVAGVEDLGTTGRGNDMQI 207
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. TrEMBL
Match: A0A267G7E3 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014412g2 PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 2.593e-110
Identity = 159/181 (87.85%), Postives = 169/181 (93.37%), Query Frame = 1 
Query:  115 SKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +KIEVFVD  PVQCDPGMTVLQACA+AGVEIPRFCYHERLSIAGNCRMCLVEVEKS+KP+ASCA PV KGMR+KT+SPMT+KAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRF DN + GKRAVEDKNIGPLVKTIMTRCIHCT   RFASE+AGV DLGTTGRG DMQ+
Sbjct:   42 NKIEVFVDGNPVQCDPGMTVLQACALAGVEIPRFCYHERLSIAGNCRMCLVEVEKSIKPVASCAMPVMKGMRVKTDSPMTRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFTDNLHDGKRAVEDKNIGPLVKTIMTRCIHCTRCVRFASEVAGVEDLGTTGRGNDMQI 222
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. TrEMBL
Match: V3ZZE4 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_206956 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 4.540e-107
Identity = 158/201 (78.61%), Postives = 173/201 (86.07%), Query Frame = 1 
Query:   55 VKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            V    L  L K ++A   +P K+EVF+D  PV  +PG TVLQACA  GVEIPRFCYH+RLSIAGNCRMCLVEVEKS KPIASCA PV KGMR+KT+SP+++KAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRF D+AY GKRAVEDKNIGPLVKTIMTRCIHCT   RFASE+AGV+DLGTTGRG DMQV
Sbjct:   10 VAKTPLSALAKYSSAPAASPEKVEVFIDGKPVYVEPGTTVLQACAEGGVEIPRFCYHDRLSIAGNCRMCLVEVEKSPKPIASCAMPVMKGMRVKTDSPVSRKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFTDSAYTGKRAVEDKNIGPLVKTIMTRCIHCTRCIRFASEVAGVDDLGTTGRGNDMQV 210
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. TrEMBL
Match: E7D1B8 (Putative NADH-ubiquinone oxidoreductase (Fragment) OS=Latrodectus hesperus OX=256737 PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 6.740e-107
Identity = 159/209 (76.08%), Postives = 169/209 (80.86%), Query Frame = 1 
Query:   31 LVKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
             +KS F K     L    K  TAV   P K+EVF+DD PV  DPG TVLQA A+ GVEIPRFCYHERLSIAGNCRMCLVEVEKS KP+A+CA PV  G R+KTNS MTKKAREGVMEFLL+NHPLDCPICDQGGECDLQD+SM FGSDRSRF D  Y GKRAVEDKNIGPLVKTIMTRCIHCT   RF SEIAGV+DLGTTGRG DMQV
Sbjct:    5 FLKSKFPKAVLPWLIQKSKNVTAVQAKPKKLEVFIDDKPVLVDPGTTVLQAAAMVGVEIPRFCYHERLSIAGNCRMCLVEVEKSPKPVAACAMPVMNGWRVKTNSDMTKKAREGVMEFLLINHPLDCPICDQGGECDLQDESMAFGSDRSRFQDIYYTGKRAVEDKNIGPLVKTIMTRCIHCTRCIRFGSEIAGVDDLGTTGRGSDMQV 213
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Cavefish
Match: ndufs1 (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like [Source:NCBI gene;Acc:103033212])

HSP 1 Score: 289.271 bits (739), Expect = 1.699e-93
Identity = 137/188 (72.87%), Postives = 155/188 (82.45%), Query Frame = 1 
Query:   94 TAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            T+V  + + +EVFVD  PV  +PG TVLQAC   GV+IPRFCYHERLS+AGNCRMCLVE+E++ KP+A+CA PV KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF +    GKRAVEDKN+GPL+KTIMTRCI CT   RFASEIAGV DLGTTGRG  MQ+
Sbjct:   29 TSVRASSNMVEVFVDGKPVMVEPGTTVLQACEKVGVQIPRFCYHERLSVAGNCRMCLVEIERAPKPVAACAMPVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFTE----GKRAVEDKNMGPLIKTIMTRCIQCTRCVRFASEIAGVEDLGTTGRGNSMQI 212
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Cavefish
Match: NDUFS1 (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial [Source:NCBI gene;Acc:103040078])

HSP 1 Score: 159.844 bits (403), Expect = 2.356e-45
Identity = 75/94 (79.79%), Postives = 81/94 (86.17%), Query Frame = 1 
Query:  376 MEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            MEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF ++    KRAVEDKNIGPL+KTIMTRCI CT   RFASEIAGV DLGTTGRG  M++
Sbjct:    1 MEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFTES----KRAVEDKNIGPLIKTIMTRCIQCTRCVRFASEIAGVEDLGTTGRGNAMEI 90
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Cavefish
Match: ENSAMXT00000044813.1 (pep primary_assembly:Astyanax_mexicanus-2.0:19:14543871:14545877:-1 gene:ENSAMXG00000034457.1 transcript:ENSAMXT00000044813.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 70.0922 bits (170), Expect = 1.140e-15
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1 
Query:  175 LQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLK 288
            LQAC   GV+IPRFCYHERLS+AGNCRMCLVE+EKS K
Sbjct:   44 LQACEKVGVQIPRFCYHERLSVAGNCRMCLVEIEKSPK 81
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Sea Lamprey
Match: ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478])

HSP 1 Score: 291.582 bits (745), Expect = 4.275e-95
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 1 
Query:  121 IEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            IEVFVD   V  +PG TVLQAC   G++IPRFCYH+RLSIAGNCRMCLVE+E++ KP+A+CA PV KG  I TNS  TKKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM+FGSDRSRF +    GKRAVEDKNIGPLVKTIMTRCIHCT   RF SE+AGV+DLGTTGRG DMQV
Sbjct:   34 IEVFVDGQSVMVEPGTTVLQACEKVGIQIPRFCYHDRLSIAGNCRMCLVEIERAPKPVAACAMPVMKGWNILTNSEKTKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFTE----GKRAVEDKNIGPLVKTIMTRCIHCTRCIRFGSEVAGVDDLGTTGRGSDMQV 208
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Nematostella
Match: EDO49065 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI03])

HSP 1 Score: 331.643 bits (849), Expect = 2.582e-110
Identity = 155/213 (72.77%), Postives = 174/213 (81.69%), Query Frame = 1 
Query:   19 YMTMLVKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            +   + +   IK     L  +     +    P K+EVFV+D  V  DPG TVLQACA AGVEIPR+CYH+RLSIAGNCRMCLVEVE+S+KP+ASCA PV KGM+IKT+SPMT+KAREGVMEFLL+NHPLDCPICDQGGECDLQDQSM FGSDRSRFVDN + GKRAVEDKN+GPLVKTIMTRCIHCT   RFASEIAGV+DLGTTGRG DMQV
Sbjct:    2 WRPTITRGAVIKHARSALPVINSARQSTAAAPEKVEVFVNDKSVLVDPGFTVLQACAAAGVEIPRYCYHDRLSIAGNCRMCLVEVERSIKPVASCAMPVMKGMKIKTDSPMTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRSRFVDNQFSGKRAVEDKNVGPLVKTIMTRCIHCTRCIRFASEIAGVDDLGTTGRGSDMQV 214
[Close]
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Medaka
Match: NDUFS1 (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial [Source:NCBI gene;Acc:101157518])

HSP 1 Score: 290.041 bits (741), Expect = 7.765e-94
Identity = 138/188 (73.40%), Postives = 155/188 (82.45%), Query Frame = 1 
Query:   94 TAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            T V    + +EVFVD  PV+ +PG TVLQAC  AG++IPRFCYHERLS+AGNCRMCLVE+EK+ KP+A+CA PV KG  I TNS  T+KAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +    GKRAVEDKNIGPL+KTIMTRCI CT   RFASEIAGV DLGTTGRG ++Q+
Sbjct:   27 TPVRAASNMVEVFVDGKPVEVEPGTTVLQACDKAGIQIPRFCYHERLSVAGNCRMCLVEIEKAPKPVAACAMPVMKGWNILTNSEKTRKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMQFGSDRSRFTE----GKRAVEDKNIGPLIKTIMTRCIQCTRCVRFASEIAGVEDLGTTGRGNELQI 210
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Medaka
Match: ENSORLT00000033635.1 (pep primary_assembly:ASM223467v1:21:22883053:22885012:1 gene:ENSORLG00000027518.1 transcript:ENSORLT00000033635.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.299 bits (129), Expect = 1.796e-9
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 1 
Query:  121 IEVFVDDIPVQCDPGMTVLQAC--AIAGVEIPRFCYHERLSIAGNCRMCLVE 270
            +EVFVD  PV  +PG TVLQAC  A+AG          RLS+AGNC MCLVE
Sbjct:   44 LEVFVDGKPVMVEPGTTVLQACEKAVAG----------RLSVAGNCWMCLVE 85
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Planmine SMEST
Match: SMESG000081864.1 (SMESG000081864.1)

HSP 1 Score: 429.483 bits (1103), Expect = 4.174e-148
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 1 
Query:   28 MLVKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT---RFASEIAGVNDLGTTGRGGDMQV 648
            MLVKSCFIK+KNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCT   RFASEIAGVNDLGTTGRGGDMQV
Sbjct:    1 MLVKSCFIKLKNIGLQFLRKEATAVIVNPSKIEVFVDDIPVQCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIASCAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCTRCIRFASEIAGVNDLGTTGRGGDMQV 210
The following BLAST results are available for this feature:
BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
NDUFS15.063e-9173.06NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
NDUFS15.063e-9173.06NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
NDUFS15.270e-9173.06NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
NDUFS15.270e-9173.06NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
NDUFS15.270e-9173.06NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
nuo-59.025e-9469.74NADH Ubiquinone Oxidoreductase [Source:UniProtKB/... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ND-757.560e-10582.42gene:FBgn0017566 transcript:FBtr0071180[more]
ND-757.560e-10582.42gene:FBgn0017566 transcript:FBtr0071181[more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ino80db4.750e-9372.34INO80 complex subunit Db [Source:NCBI gene;Acc:563... [more]
ndufs14.750e-9372.34NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
ino80db6.631e-8660.99INO80 complex subunit Db [Source:NCBI gene;Acc:563... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
znf33b3.555e-9071.36zinc finger protein 33B [Source:Xenbase;Acc:XB-GEN... [more]
znf33b2.993e-8863.76zinc finger protein 33B [Source:Xenbase;Acc:XB-GEN... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ndufs14.562e-9369.23NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
Ndufs14.562e-9369.23NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
Ndufs11.704e-4245.79NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
Ndufs11.091e-3756.90NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
Ndufs12.251e-2053.25NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q94511|NDUS1_DROME7.578e-10482.42NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
sp|Q91VD9|NDUS1_MOUSE3.191e-9269.23NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
sp|Q66HF1|NDUS1_RAT1.233e-9169.23NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
sp|P15690|NDUS1_BOVIN1.828e-9174.09NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
sp|Q0MQG2|NDUS1_PANTR1.801e-9073.06NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I8FXG32.339e-11287.85Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267EU881.628e-11087.85Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
A0A267G7E32.593e-11087.85Uncharacterized protein (Fragment) OS=Macrostomum ... [more]
V3ZZE44.540e-10778.61Uncharacterized protein OS=Lottia gigantea OX=2251... [more]
E7D1B86.740e-10776.08Putative NADH-ubiquinone oxidoreductase (Fragment)... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ndufs11.699e-9372.87NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
NDUFS12.356e-4579.79NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
ENSAMXT00000044813.11.140e-1581.58pep primary_assembly:Astyanax_mexicanus-2.0:19:145... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ndufs14.275e-9577.09NADH:ubiquinone oxidoreductase core subunit S1 [So... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO490652.582e-11072.77Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
NDUFS17.765e-9473.40NADH-ubiquinone oxidoreductase 75 kDa subunit, mit... [more]
ENSORLT00000033635.11.796e-957.69pep primary_assembly:ASM223467v1:21:22883053:22885... [more]
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BLAST of NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000081864.14.174e-14898.10SMESG000081864.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30007568 ID=SMED30007568|Name=NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial|organism=Schmidtea mediterranea sexual|type=transcript|length=655bp
CGAAATCTATATAAATATTATATGACTATGCTTGTTAAGAGTTGCTTTAT
CAAAGTTAAGAATATTGGCTTGCAGTTTTTAAGAAAAGAGGCTACGGCTG
TAATAGTAAATCCAAGCAAAATTGAAGTATTTGTTGACGATATTCCTGTT
CAATGTGACCCAGGAATGACTGTTTTACAAGCTTGTGCAATTGCAGGAGT
TGAAATACCAAGGTTTTGCTACCACGAGCGTTTATCTATCGCTGGAAATT
GTAGGATGTGTTTAGTTGAAGTTGAAAAAAGTTTGAAACCTATTGCTAGT
TGTGCCGCGCCTGTAAATAAGGGTATGAGAATTAAAACAAATTCACCAAT
GACTAAAAAGGCTCGCGAGGGTGTTATGGAATTTTTATTAGTTAACCATC
CCTTGGATTGTCCAATTTGTGATCAAGGCGGTGAATGTGATTTACAAGAT
CAATCAATGGTCTTTGGTAGTGATCGATCTAGATTTGTTGATAATGCATA
TTTTGGGAAAAGAGCTGTTGAAGATAAAAACATTGGACCGTTAGTGAAAA
CTATAATGACAAGATGTATCCATTGTACTAGATTTGCCAGTGAAATAGCT
GGTGTAAATGATTTGGGAACGACAGGGAGAGGAGGTGATATGCAGGTAAA
TTTCT
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protein sequence of SMED30007568-orf-1

>SMED30007568-orf-1 ID=SMED30007568-orf-1|Name=SMED30007568-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=218bp
RNLYKYYMTMLVKSCFIKVKNIGLQFLRKEATAVIVNPSKIEVFVDDIPV
QCDPGMTVLQACAIAGVEIPRFCYHERLSIAGNCRMCLVEVEKSLKPIAS
CAAPVNKGMRIKTNSPMTKKAREGVMEFLLVNHPLDCPICDQGGECDLQD
QSMVFGSDRSRFVDNAYFGKRAVEDKNIGPLVKTIMTRCIHCTRFASEIA
GVNDLGTTGRGGDMQVNF
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR019574NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd
IPR012675Beta-grasp_dom_sf
IPR000283NADH_UbQ_OxRdtase_75kDa_su_CS
IPR0010412Fe-2S_ferredoxin-type
Vocabulary: molecular function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:0046872metal ion binding
GO:00515372 iron, 2 sulfur cluster binding
GO:00515394 iron, 4 sulfur cluster binding
GO:0003954NADH dehydrogenase activity
Vocabulary: biological process
TermDefinition
GO:0055114oxidation-reduction process
GO:0042773ATP synthesis coupled electron transport
GO:0019233sensory perception of pain
GO:0045333cellular respiration
GO:0072593reactive oxygen species metabolic process
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0005747mitochondrial respiratory chain complex I
GO:0070469respiratory chain
GO:0005739mitochondrion
GO:0005743mitochondrial inner membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingSMARTSM00929NADH_G_4Fe_4S_3_2coord: 114..154
e-value: 1.2E-18
score: 78.0
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingPFAMPF10588NADH-G_4Fe-4S_3coord: 114..153
e-value: 1.8E-16
score: 59.3
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingPROSITEPS518394FE4S_HC3coord: 109..148
score: 16.364
NoneNo IPR availablePFAMPF13510Fer2_4coord: 32..107
e-value: 9.0E-18
score: 64.1
NoneNo IPR availableGENE3DG3DSA:3.10.20.740coord: 32..154
e-value: 2.5E-39
score: 135.8
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 22..206
NoneNo IPR availablePANTHERPTHR11615:SF280NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 1, MITOCHONDRIALcoord: 22..206
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved sitePROSITEPS00641COMPLEX1_75K_1coord: 62..79
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved sitePROSITEPS00642COMPLEX1_75K_2coord: 129..141
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 31..109
score: 9.983
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 32..104
e-value: 7.36104E-11
score: 54.3232
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILYSSF542922Fe-2S ferredoxin-likecoord: 33..154