Protocadherin-h

Overview
NameProtocadherin-h
Smed IDSMED30007561
Length (bp)3942
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Protocadherin-h (SMED30007561) t-SNE clustered cells

Violin plots show distribution of expression levels for Protocadherin-h (SMED30007561) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protocadherin-h (SMED30007561) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protocadherin-h (SMED30007561) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30007561

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 10

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30007561h1SMcG0004437 Contig40472uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30007561h1SMcG0004437 Contig40472newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
body wall musculatureSMED30007561h1SMcG0004437 dd_Smed_v4_7973_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Protocadherin-h vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655])

HSP 1 Score: 272.322 bits (695), Expect = 8.991e-75
Identity = 230/783 (29.37%), Postives = 374/783 (47.77%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSEC----ISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRKEGVDL---EFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKIE----GFRKLRLTVRVCDSGLPQKCSEDLM 2779
            +++ EE+P  T        L   + ++Y F  +G     E     + +  KTG +   +  IDRE L  C +   G  C+    +   +  +     L   + E+ DINDN P + + V+ L  PE+T   S+  + +A D+D G N +  Y LQ        F L+ +E++    P+     ++D E    +++TI  +D G P  +S+  ++VTV+D NDN P+F +  +     + E + +   +++V A D D   N  I Y      P+ +R    LD +TG + ++ P+D +    + +F V+AKD    P   S+ A V + V D+ND  P I I      +    +G    NI E++  +++ +A +Q+ D DE + + + C +     F+L     +  +  K + L  +   D E  +   + I   D+G     ++ ++ + V D NDN P F            +     I ++ A D D G NAEL Y++   +P +   F I   TG++ +   LDRE+++ Y + V+A D+G PSL GT  +L+ V D ND  P F    Y F + E+    S VG+V   D D G+NA++           S+ + N    F I+  +G I+ +   DRE + +Y+  ++A++  V PR  SA V  TI VLD NDNAP  TAP N S   +  +  +G  ++   A D D   NAEL YSI    +PY +F +   SG + L K+IE    G    RL V+V D G P +    L+
Sbjct:   62 YKVPEEQPPNT--------LIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYE--AELSENSPIGHSVIQVKANDSDQGANAEIEYTFH-QAPEVVRRLLRLDRNTGLITVQGPVDRED-LSTLRFSVLAKDRGTNPK--SARAQVVVTVKDMNDNAPTIEIRGIG--LVTHQDGMA--NISEDVA-EETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSL-EPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQ---------LSVEQDNG--DFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPR--SAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIA-GGNPYGLFQIGSHSGAITLEKEIERRHHGLH--RLVVKVSDRGKPPRYGTALV 808
[Close]
BLAST of Protocadherin-h vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655])

HSP 1 Score: 271.552 bits (693), Expect = 7.440e-74
Identity = 230/783 (29.37%), Postives = 374/783 (47.77%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSEC----ISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRKEGVDL---EFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKIE----GFRKLRLTVRVCDSGLPQKCSEDLM 2779
            +++ EE+P  T        L   + ++Y F  +G     E     + +  KTG +   +  IDRE L  C +   G  C+    +   +  +     L   + E+ DINDN P + + V+ L  PE+T   S+  + +A D+D G N +  Y LQ        F L+ +E++    P+     ++D E    +++TI  +D G P  +S+  ++VTV+D NDN P+F +  +     + E + +   +++V A D D   N  I Y      P+ +R    LD +TG + ++ P+D +    + +F V+AKD    P   S+ A V + V D+ND  P I I      +    +G    NI E++  +++ +A +Q+ D DE + + + C +     F+L     +  +  K + L  +   D E  +   + I   D+G     ++ ++ + V D NDN P F            +     I ++ A D D G NAEL Y++   +P +   F I   TG++ +   LDRE+++ Y + V+A D+G PSL GT  +L+ V D ND  P F    Y F + E+    S VG+V   D D G+NA++           S+ + N    F I+  +G I+ +   DRE + +Y+  ++A++  V PR  SA V  TI VLD NDNAP  TAP N S   +  +  +G  ++   A D D   NAEL YSI    +PY +F +   SG + L K+IE    G    RL V+V D G P +    L+
Sbjct:   62 YKVPEEQPPNT--------LIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYE--AELSENSPIGHSVIQVKANDSDQGANAEIEYTFH-QAPEVVRRLLRLDRNTGLITVQGPVDRED-LSTLRFSVLAKDRGTNPK--SARAQVVVTVKDMNDNAPTIEIRGIG--LVTHQDGMA--NISEDVA-EETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSL-EPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQ---------LSVEQDNG--DFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPR--SAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIA-GGNPYGLFQIGSHSGAITLEKEIERRHHGLH--RLVVKVSDRGKPPRYGTALV 808
[Close]
BLAST of Protocadherin-h vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 260.381 bits (664), Expect = 7.065e-71
Identity = 231/789 (29.28%), Postives = 365/789 (46.26%), Query Frame = 2 
Query:  464 GLLLFILIKYSQTMKNYFRITEEEP----IGTDL--FEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF-TAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
             +LL  ++ +S   +  + I EE P    IG  L    +S      + +  +F ++        I I++ TG +     RIDRE LCA   +D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L  A D D+G N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P F +       ++ E   V   + ++ A D D  +N +I++     +    R  F L++ TG + +K+PLD +    ++K +V+A D    P    + A V + V DVND +P I+I +    V+D       + + EN+ P  + +A I + D D D    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  + I V D+NDN P F   F   ++ EN S     + +V A D D G NAE+ Y +    P +   F +D  TG + +   LDRE++D Y  T++A D G P LT    + + + D ND  PVF   EY+F +PE+   +  VG++  TD D G N+ ++   L +            + F I   +G I      DRE + SY+  ++A +     + S++   TI V+D NDN P F   P N S   +    + GT +    A D D   NAE+ YSIV      +F +D  +G + L +K  +      R+ V+  D G P
Sbjct:   32 AVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIE--VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREET-PNHKLLVLASDGGLMP----ARAMVLVNVTDVNDNVPSIDIRYIVNPVNDT------VVLSENI-PLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSN--QFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS-PGIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEN-----------DDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR-SSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 780
[Close]
BLAST of Protocadherin-h vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 260.381 bits (664), Expect = 7.065e-71
Identity = 231/789 (29.28%), Postives = 365/789 (46.26%), Query Frame = 2 
Query:  464 GLLLFILIKYSQTMKNYFRITEEEP----IGTDL--FEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF-TAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
             +LL  ++ +S   +  + I EE P    IG  L    +S      + +  +F ++        I I++ TG +     RIDRE LCA   +D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L  A D D+G N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P F +       ++ E   V   + ++ A D D  +N +I++     +    R  F L++ TG + +K+PLD +    ++K +V+A D    P    + A V + V DVND +P I+I +    V+D       + + EN+ P  + +A I + D D D    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  + I V D+NDN P F   F   ++ EN S     + +V A D D G NAE+ Y +    P +   F +D  TG + +   LDRE++D Y  T++A D G P LT    + + + D ND  PVF   EY+F +PE+   +  VG++  TD D G N+ ++   L +            + F I   +G I      DRE + SY+  ++A +     + S++   TI V+D NDN P F   P N S   +    + GT +    A D D   NAE+ YSIV      +F +D  +G + L +K  +      R+ V+  D G P
Sbjct:   32 AVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIE--VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREET-PNHKLLVLASDGGLMP----ARAMVLVNVTDVNDNVPSIDIRYIVNPVNDT------VVLSENI-PLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSN--QFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS-PGIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEN-----------DDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR-SSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 780
[Close]
BLAST of Protocadherin-h vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 259.61 bits (662), Expect = 1.082e-70
Identity = 232/789 (29.40%), Postives = 367/789 (46.51%), Query Frame = 2 
Query:  464 GLLLFILIKYSQTMKNYFRITEEEP----IGTDL--FEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF-TAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
             +LL  ++ +S   +  + I EE P    IG  L    +S      + +  +F ++        I I++ TG +     RIDRE LCA   +D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L  A D D+G N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P F +       ++ E   V   + ++ A D D  +N +I++     +    R  F L++ TG + +K+PLD +    ++K +V+A D    P    + A V + V DVND +P I+I +    + +  N TV ++  EN+ P  + +A I + D D D    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  + I V D+NDN P F   F   ++ EN S     + +V A D D G NAE+ Y +    P +   F +D  TG + +   LDRE++D Y  T++A D G P LT    + + + D ND  PVF   EY+F +PE+   +  VG++  TD D G N+ ++   L +            + F I   +G I      DRE + SY+  ++A +     + S++   TI V+D NDN P F   P N S   +    + GT +    A D D   NAE+ YSIV      +F +D  +G + L +K  +      R+ V+  D G P
Sbjct:   43 AVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIE--VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREET-PNHKLLVLASDGGLMP----ARAMVLVNVTDVNDNVPSIDIRY----IVNPVNDTVVLS--ENI-PLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSN--QFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS-PGIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEN-----------DDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR-SSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 791
[Close]
BLAST of Protocadherin-h vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 198.364 bits (503), Expect = 7.599e-51
Identity = 177/629 (28.14%), Postives = 297/629 (47.22%), Query Frame = 2 
Query:  782 LEFEILDINDNRPMWPTNVVELLYPES-TEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLD 2665
            +E  ++D+NDN P++ ++   +   E+ T    I    A D+D G N  + Y +           ++ S   + L  + D            I A+D  +P LSST+ + + VIDIND+ P  I         + E  ++   + +V AID+DS  NG I Y ++ S      + F +D D+G +K  K LD +   + Y   V A+D       L++S T+ + + D+ND  P         F    YN    + I E M P+ S +  ++  D DED K        ++E F ++ DI   +  ILS S    R++ +   V I+  D G  +    + + + D N  P    H F+  + E++      +  ++A D D G NA + Y+I + Q      FRID  +G + + + LDRE++  +++ V A D   P L  +  I ++++DIND  P F +  Y   I ED  V +    V A D DIG N  + Y FL+++       + + + F++ + SG + ++SKLDRE      + I A +   P   SA    T+T+ D NDNAP F     +  I+ ++   +G+ +    A DADE  NA++++ I    D  +F+++
Sbjct:    2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIG-GLTIDYSTGEVTLRERIDAKNSP---ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAA--QKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGS------EDFIIDEDSGLIKTTKLLDRETTAR-YSLKVTARDMGTP--SLNTSTTIAVVLKDINDNAPT--------FDKKEYN----VTISEEM-PRGSQIITLKAVDNDEDQKITYRIEEADREVFSIL-DIGD-QGAILSVSGELKRQDHKVR-VEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPI-GYPVITLKAEDHDRGDNARIVYSIDSSQ-----FFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDY-FLNES-----SSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENS--PVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIE 584

HSP 2 Score: 159.458 bits (402), Expect = 7.288e-39
Identity = 186/684 (27.19%), Postives = 310/684 (45.32%), Query Frame = 2 
Query:  776 VDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQF-----IRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDA--RFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGE-----IMITSKLDRETKPS-YSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFT--APINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDS-GLPQKCS 2767
            V L   ++DIND+ P        +   E+    + +    A D+D G N +IKY ++     + +F ++  ++ LI T K  +D ET   +++ + A D G P L+++  + V + DINDN P F +  +  N  + E     + I+ + A+D D +Q  +I Y I+ +  +      I DQ  + S +GELK +        HK     V  + SA     L     V + + DVN          + P+ +D       + IPE+ +P    +  ++ ED D  D + I  S+D+ + FR+        S  +S S   DRE++ T  V +T  D+       S  I + + D NDN P+F +  +   ++E+       + QV AID D+G N  + Y  +N    S +   FR+D  +G + + + LDRE+     + + A D+G PSL+    I + + D+ND  P FE + Y   I E++ V S VG + A D D G NA IS+     A           + F I++D+ +     I+  ++ D E K + +   ++A    +  + S+TV   I V D NDN P       + N   ++   + IG   A       D ++NA L Y +    +  +    YT  IL    K E  R + ++ + C S G   +CS
Sbjct:  104 VPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME----GSEDFIIDE-DSGLIKTTKL-LDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEY--NVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-------HK-----VRVEISATDQGGLQGRCVVNVFIDDVN----------SAPYFNDH---PFSVKIPEH-SPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRI-----DPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDY-FLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGA---------DAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA----SSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAF------DPDQNATLEYFL--EENDLIEAEKYTGKILV---KQEWKRNMDVSFKTCVSDGANTECS 720

HSP 3 Score: 108.227 bits (269), Expect = 3.043e-23
Identity = 109/339 (32.15%), Postives = 155/339 (45.72%), Query Frame = 2 
Query: 1802 INVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAV----DQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVL--DCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFN-LDYTSGILFLAKKIEGFR---KLRLTVRVCD-SGLPQKCSEDLMI 2782
            I V D NDN P FA   +N  + EN +     I  V+A D+D G N ++ Y++            ID  TG++ +     RE  D  N  + AV    D  +P+L+ T  + I V DIND  P     +    + E+ ++  +VG V A D D G N  I Y                 E F I +DSG I  T  LDRET   YS+ + A ++  P   S   S TI V+  D NDNAP F     N  ++I  E   G++I   +A D DE++  ++TY I  A D  VF+ LD       L+   E  R   K+R+ +   D  GL  +C  ++ I
Sbjct:    4 ITVVDVNDNAPVFASDSYNVTILENITIPAV-IATVKATDEDFGTNGKVHYSM--ASSSGIGGLTIDYSTGEVTL-----RERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSM------------EGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTP---SLNTSTTIAVVLKDINDNAPTFDKKEYN--VTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEA-DREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFI 314
[Close]
BLAST of Protocadherin-h vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 188.734 bits (478), Expect = 9.007e-48
Identity = 203/767 (26.47%), Postives = 333/767 (43.42%), Query Frame = 2 
Query:  497 QTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI----AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDH-YNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDP---YVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            Q  K    + E+ PI T +  V           Y      D       ++   +G  ++ K +DRE L     D   +K       +        +   +LD+ DN P++  +     + E  E   I   +    A D D GEN  I+Y L     +  N    N+++ +I T    +D ET     + ++A D+G P   ST  V++TV+D+NDN P F  + +  N  + E  ++ A+I  V A D+D   NG+++Y +  S          +D  TGE+ L++ +D    +     ++ AKD A PA   LSS+  + I V D+ND  P +                  I + EN+   + ++  +   D D      I  S++  E F +  D   +K+     +K  DRE      +++T RD G      S  I + + D NDN P F  K +N  ++E    R   I  ++A+D D  ++ ++ Y I        +   I      + +   L R  QDH   + + A DQG   L G   + + ++D+N   P F    +  +IPE + +   V  ++A D D G NARI Y   S  F            F+I   SG+I ++S LDRE + ++S+I+ A +  +P   + +    + + D NDN+P+FT+    + IS D    +GT      A DAD   N  + Y +  ++      +F LD TSG L ++ K+  E F  + L +   D G P
Sbjct:  166 QQEKYVKELPEDTPIETIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVL-----DKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDS---YFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGE--GNGKNLLAINAKSGVIQTAA-PLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSY--NVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGI---GGLTIDYSTGEVTLRERIDAK--NSPITAVIRAKDGAQPA---LSSTVPLTINVIDINDHAPTL------------IAAQKMITLEENVAIGE-EVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKT-----TKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMP-RGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKR--QDHKVRVEISATDQG--GLQGRCVVNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF------------FRIDPSSGDISVSSDLDREDRATFSVIVTASDHASP-PLNTSTQIEVILDDINDNSPQFTSSSYAATISEDI--PVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 870

HSP 2 Score: 159.458 bits (402), Expect = 6.945e-39
Identity = 186/684 (27.19%), Postives = 310/684 (45.32%), Query Frame = 2 
Query:  776 VDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQF-----IRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDA--RFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGE-----IMITSKLDRETKPS-YSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFT--APINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDS-GLPQKCS 2767
            V L   ++DIND+ P        +   E+    + +    A D+D G N +IKY ++     + +F ++  ++ LI T K  +D ET   +++ + A D G P L+++  + V + DINDN P F +  +  N  + E     + I+ + A+D D +Q  +I Y I+ +  +      I DQ  + S +GELK +        HK     V  + SA     L     V + + DVN          + P+ +D       + IPE+ +P    +  ++ ED D  D + I  S+D+ + FR+        S  +S S   DRE++ T  V +T  D+       S  I + + D NDN P+F +  +   ++E+       + QV AID D+G N  + Y  +N    S +   FR+D  +G + + + LDRE+     + + A D+G PSL+    I + + D+ND  P FE + Y   I E++ V S VG + A D D G NA IS+     A           + F I++D+ +     I+  ++ D E K + +   ++A    +  + S+TV   I V D NDN P       + N   ++   + IG   A       D ++NA L Y +    +  +    YT  IL    K E  R + ++ + C S G   +CS
Sbjct:  463 VPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSME----GSEDFIIDE-DSGLIKTTKL-LDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEY--NVTISEEMPRGSQIITLKAVDNDEDQ--KITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-------HK-----VRVEISATDQGGLQGRCVVNVFIDDVN----------SAPYFNDH---PFSVKIPEH-SPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRI-----DPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGPNGIVDY-FLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGA---------DAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA----SSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAF------DPDQNATLEYFL--EENDLIEAEKYTGKILV---KQEWKRNMDVSFKTCVSDGANTECS 1079
[Close]
BLAST of Protocadherin-h vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0])

HSP 1 Score: 171.785 bits (434), Expect = 1.259e-42
Identity = 178/663 (26.85%), Postives = 291/663 (43.89%), Query Frame = 2 
Query:  791 EILDINDNRPMWPTNVVELLYPESTEKQSIKL-AIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDK-SFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSI-IIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGF--RKLRLTVRVCDSGLPQK 2761
            ++LD     P +   + ++  PE T   +  +  +A +   G +  I+Y LQ   + + +  ++     + +   FD  +E ++ +  T++A +      +S +++++   D+NDN P F  N +H    V E    E  +L V+A D DS   G ++Y+I           F ++  TGE+  +KPL   R H     +V AKD      E  +SA + I V D + + PQ        F   +Y     I   E++ P       I I       K  +   S D   +F +  D  K+       ++  D +   T  + I         N   ++I + D NDNPP+F+      ++ E+    +     V+A DKD  KN E+RY+II+  P S     ID FTG++   + LD E   +Y + V A D G P  +    + I V D+ND  P FE   Y  ++ E++   + VG V A D+D  +N +I Y             TN  E F I +  G +     +DRE      I I+     V PR  S+T SA I+VLD NDN P     ++ + I +     + T I    A D D+  N  + Y     +  +V     ++G ++L +++     R  RL+V V D G+P+K
Sbjct:  529 DLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQ---NQDEHLTVDTMSGTVCIQKTFD--FEKQKSYQTTVIATNANSETSTSLISIRLK--DVNDNWPIFYPNEYH--LTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSE-----SSSFSINPVTGEVFAQKPLARGRFH----LVVSAKDGGGQSSE--NSANIHITVIDKDTKTPQ--------FSRSKY----EIRTTEDILP------GIAIGSVGAMSKVKYSIYSGDQDHNFSIDEDTGKIY-----VTRYLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKL-HEPFYVVQASDKDKKKNGEVRYSIISSHPGSS--IEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRI-----------TNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPR--SSTASARISVLDVNDNPPSC---LSITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVVK---SNGDVYLRRQLNASDERHQRLSVIVSDQGVPRK 1126

HSP 2 Score: 138.272 bits (347), Expect = 2.487e-32
Identity = 188/788 (23.86%), Postives = 323/788 (40.99%), Query Frame = 2 
Query:  443 IKTMNAIGLLLFILI-----KYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNL------ENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYID----PSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNEN-TSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSG 2749
            +K+ N   +L+F LI      + Q +   F + E   IGT +  +S    +    +Y F V  D   S+ + + +++G       +D E         K  K   +  K     E +D+  E+ D NDN P +   VV+L   E  +   S  L    D D G    +  ++  I   N+N  F L      E  +  L++  + D ++  K  + + I A+D G+P     L   + +ID NDN P F ++ +    +V    S+ + ++ V A D D  +N RI+Y I     PS   F   Q  + + T  L             ++  IV+A D   +P  LSSSA V I V       P ++I +         + + H+     +    S +A + I     D K  +  S     S       ++   ++L      DRE     H++     +G+       ++ + D NDN P++ H    +++ N T   +R +    A D DLG+N  +RY++++ +  S     ID  TG++++   +D          V A D G P+L+    ++  + D    PP FE   ++ +IPED  + + +  V A +   G + RI Y              N  E   +   SG + I    D E + SY   + A N       ++T   +I + D NDN P F    N   +++         + +  A+D D     E++Y I+  ++   F+++  +G +F  K +   R   L V   D G
Sbjct:    1 MKSKNKWNILIFSLIFLIFPTFCQCLTK-FTVPESAQIGTRIGWISGKREESAAPKY-FVVFPDEQTSKFLKVDERSGEISTIAHLDYE---------KRSKFDIVAVKVEESGETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGD-GPKFDVHRFV--ILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDK--YELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRY--TASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPAS---------THDVIVVASDHG-SP-SLSSSAVVTITVLGSTLSSPPLDIIWLV------ESNSAHLMENSTLG---SIVARVSIAQQYRDTKLRLIGS-----SALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTIGDINDNAPQW-HSSQIHISLNRTQGGSRTL---TAKDPDLGQNGWIRYSVLDTELVS-----IDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSL-----------QNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNA---NSETSTSLISIRLKDVNDNWPIFYP--NEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHIL--SESSSFSINPVTGEVFAQKPLARGR-FHLVVSAKDGG 717

HSP 3 Score: 107.457 bits (267), Expect = 5.136e-23
Identity = 134/555 (24.14%), Postives = 235/555 (42.34%), Query Frame = 2 
Query:  998 ILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKES--FRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI----IINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMIT----SKLDRETKPSYSIIIEAINVVNP-RKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSI 2629
            ++    ++D E    +++ ++    G+ + +    V V V ++NDN P F  +   P + V E   V + +  V A  KD +    + Y++           F +D  TG + L  PLD++     +   + A D +       +   + I V+D+ND  P     F+ P     Y  TV    P   +P Q      +IE  D D +  +  SL    S  FR+  +   +   +L  +        +   V +T  DNG    S ++    II   +  D P     +F F V EN+      IG +        ++ E  Y I +  P +   F ID F G++++  P+DRE++  +   V   ++   S        ++V D ND  PVF +V Y   + +  +   K+G + A+D+D G+N R+SY  LS          N      +  D+G I +     ++LD     ++ I++EA +  +P R     V  ++ +   + +AP F  P+    +  DT  S+GT +   RA++    +N  L YS+
Sbjct: 1881 VIRTNLELDREILERYSLKVIGTGSGQQIGT---RVDVRVNNLNDNVPSFPMS--KPRR-VPENLRVGSYVATVGA--KDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEV-LPEHTLTIKATDGS-----FDTFTNLTIFVSDINDNAPT----FSKPL----YQTTVS---PATFSPGQ---PFAKIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAG-------ERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKI-GLQIGNLSG-----EESREFHYRIQD--PEASKIFSIDKF-GRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSG---------NDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDT--SVGTVLQKIRASNRLGMRNDGLLYSL 2380

HSP 4 Score: 91.6633 bits (226), Expect = 3.674e-18
Identity = 128/486 (26.34%), Postives = 209/486 (43.00%), Query Frame = 2 
Query: 1301 QFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLP 2755
            +F ++S TG + +  PLD +   + +  I+I  D        + S TV + VAD ND  PQ++   +TP           + I E+   +  D+ H +   +D      +D   + K SF L+ D +     +        R     +  +I  R          +  N+   N NP   A     F      S  +  + + + I K   + A L Y+I  V+   D+ F +DS  G +  +  LDRE  + Y++ VI    G+    GT  + + V ++ND  P F   + R ++PE+  V S V  V A  +D+   A + Y  +SD+             F I + +G I +T+ LD E  P +++ I+A +      F    + TI V D NDNAP F+ P+  + +S  T  S G   A   A D D      LTYS+ + +   +F +   SG LF+        +  +TV   D+G+P
Sbjct: 1672 KFSINSTTGSISVL-PLDRE-ASQEHLLIIILTDGG----SRNDSCTVRVTVADQNDNKPQLDA--STP---------SELEIAESS--RVGDVLH-RFRASD------MDIGQNGKFSFELLEDSSGSLDLVPETGDLVLRRLSSLQSWKIKLRVVDHGVPGLYVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQPELAGLTYSI--VEGNIDSAFSVDS-EGVIRTNLELDREILERYSLKVIGTGSGQQ--IGT-RVDVRVNNLNDNVPSFPMSKPR-RVPENLRVGSYVATVGA--KDVDNLAPLRYFLVSDS------SGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATD----GSFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSPAT-FSPGQPFAKIEAHDLD--ARGALTYSLGQGSS-SIFRVAPESGALFMKVLPPAGERYLVTVTATDNGVP 2108

HSP 5 Score: 73.9442 bits (180), Expect = 7.862e-13
Identity = 110/478 (23.01%), Postives = 208/478 (43.51%), Query Frame = 2 
Query:  968 FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQ-AVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRD---QFFLDSDTGELKLKKPLDYDRGHKSYKF-IVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPEN-----MNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTII-NVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQI-PEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMI 2365
            F++ ++   + + P   +D E  +   + I+  D G    + +  V+VTV D NDN+PQ   +   P++  + E++ V  ++ +  A D D  QNG+ ++       + + D      L  +TG+L L++        +S+K  + +     P  Y       VE  + ++++  PQ        F+   Y  T+   +P       + P+ + L +           S ++ ++D+  +F + S+       ++  +   DRE  +   +++    +G+   ++ + + V + NDN P F       V EN    +  +  V A  KD+   A LRY ++ +   ++   F ID FTG +++ APLD E    + +T+ A D    + T   N+ I V DIND  P F    Y+  + P   S       ++A D D    AR        A  YSL + ++   F++  +SG + +
Sbjct: 1673 FSINSTTGSISVLP---LDREASQEHLLIIILTDGGS--RNDSCTVRVTVADQNDNKPQL--DASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSF-------ELLEDSSGSLDLVPETGDLVLRRLSSL----QSWKIKLRVVDHGVPGLY-------VEKNL-EISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQPELAGLTY-----------SIVEGNIDS--AFSVDSE------GVIRTNLELDREILERYSLKVIGTGSGQQIGTR-VDVRVNNLNDNVPSFPMSKPRRVPENLRVGSY-VATVGA--KDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTFT---NLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLD----AR-------GALTYSLGQGSS-SIFRVAPESGALFM 2086

HSP 6 Score: 63.5438 bits (153), Expect = 1.199e-9
Identity = 62/216 (28.70%), Postives = 98/216 (45.37%), Query Frame = 2 
Query:  764 RKEGVDLEFEILDINDNRP----MWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQF--IQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDY-DRGHKSYKFIV 1390
            R   + L   +LD+NDN P     W T  +E+L   S  K  +   +A DKD  EN  I Y    I + +  F ++     +    K  +D E     +I+IVAED+G P  SST + +++V+D+NDN P    I  +  P  +   T      I  + A+D D   NG + Y         ++   F+    G++ L++ L+  D  H+    IV
Sbjct:  922 RSSNMTLFIHVLDVNDNAPEFEKSWYT--MEVLE-NSPPKTIVGKVVARDKDSLENGQIVYR---ITNGSEYFGIDEKLGNVYT--KRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLSTA-----IGTIVAMDPDKGLNGSVLYRAQ------LQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIV 1118
[Close]
BLAST of Protocadherin-h vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4])

HSP 1 Score: 144.05 bits (362), Expect = 4.242e-34
Identity = 187/722 (25.90%), Postives = 318/722 (44.04%), Query Frame = 2 
Query:  791 EILDINDN-----RPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQ------PIYHDNLNF----NLENSENRLILTPKFDVDYETKRF-FNITIVAEDRGRP-VLSSTLNVKVTVIDINDNRPQFIQNV-FHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPS----------MPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSD---LAHIQIEDADEDDKSFIDCSLDNKESFRLISDIN--KVKSFILS-------ASKSFDRENQQTEHVRITCRD---------NGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQ-IPEDASVNSKVGVVQATDRDIG-KNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETK---PSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTE--KSIGTEIALFRATDADE--NKNAELTYSIVR---ATDPYVFNLDYTSGILF----LAKKIEGFRKLRLTVRVCDSGLPQK 2761
            E++DINDN     RP + T+V            S+    A+D D   NA I Y L+        + ++L+F    N  + E  LI      +  +T++F FN+  +A+D G P  L S+  V + V+D     P++  +    P   V E   +  +IL+  A+     +N  + Y +  S            QF  ++F   ++  E+ + + LDY++ + +Y   + A D       ++S+ T  ++V DVND +PQ        F  D + GT+   +  N + ++++   +  ++  D D D          N+  +R++ + N  + K F +         ++ FDRE      + +   D         NG N+++  + I + D NDN P F  +      + +     D+  ++A   DL K++ LRY +I         F + + +G +++  PLD E  D Y++ +IA D    + T   N+ I +ED+ND  P FE  +Y    I ED  +   +  V ATD D   K++RI Y          L    A E F+I K SG I +   LDR+     PS++ +++AI+  +           + V D NDN+P F   +    I  + E   S G      +A D D+   +NA + Y IVR        VF +D  +G +F    L ++I   R+  + VR  D G+P +
Sbjct:  968 EVVDINDNSPQFERPSYETSVSRF----EAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKP----IPMKTQKFIFNV--IADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQF--NKFENGNEWVEVVIMEGLDYEQVN-NYTLTLTATDMTS---RVASTKTFVVEVRDVNDVVPQ--------FTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQ-------NEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKA--HDLDKHSNLRYHLIGAG-GGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATT---NVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYR---------LEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAID-DDGNGLVGYADVQVNVRDINDNSPIFPERL-FGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSR 1641

HSP 2 Score: 140.969 bits (354), Expect = 2.993e-33
Identity = 159/594 (26.77%), Postives = 266/594 (44.78%), Query Frame = 2 
Query:  968 FNLENSENRLILTPKFDVDYET-KRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDR---GHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDE----IPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDD--KSFIDCSLDNKESFRLIS-----DINKVKSFILSASKSFDRENQQTEHVRITCRDNGK--------NENSKNIIINVTDKNDNPPKFAHKFNFN----VNENTSYRNR--DIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAP---LDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF-TAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDP 2647
            F ++ S   + LT   D D     +   + + A +  R    S +++ + + D+NDN P F + ++     V E   +   ILKVTA+DKD+  N RI Y +D          F ++S+ GE+  K  LD D+    H  Y+F V A+D    P  LSSSA + I+  + NDE    +P       T FV++   G   +               IQ  DAD D+   SF+D +  + +   L S      + K++  + +A  +   E +   ++ +  +D+G         + +   ++I + D N+N P+F     ++    + E T Y+     I +VEA D D   N ++ Y++   Q  S   F ID  TG +   +P    DRE +   ++TV A D+G+  L G     + V DIND  P FE   Y   +    +V + V  V A D D   NA I+Y    D      H+ N  + F+ + + SGEI +   +  +T+     +I   N + P    ++   T+ VLD    APK+ T+P     I++D    +   I   RA  + +++N+++ Y +  +  P
Sbjct:  585 FRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNR---ESHVDLTIRIDDVNDNVPTFTRPLY--TAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVD-------NHNFSINSN-GEISAKVRLDADQLNERHFVYRFNVTARDHG-EPVSLSSSAMIHIRTENTNDESAVFLPTSQY---TAFVAEDAQGGTPV-------------IQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLA---EAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGT-YKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTG-VLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQ-NDLDFFELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGI-PEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGP 1141

HSP 3 Score: 116.316 bits (290), Expect = 1.180e-25
Identity = 175/663 (26.40%), Postives = 278/663 (41.93%), Query Frame = 2 
Query:  791 EILDINDNRPMWPTNVV-----ELLYP----ESTEKQSIKLAIAYDKDI-GENAMIKYYL--QPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSST-----LNVKVTVI--DINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTV---HINIPENMNPQQSDLAHIQIEDADEDDKSF-IDCSLDNK---ESFRLISDINKVKSFILSASKSFDRE---NQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD---IGQVEAIDKD--LGKNAELRYTII-NVQPRSDARFRIDSFTGKMYIDAPLDRE--EQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDS-----GEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDP 2647
            E+ D+ND  P +  ++      E + P    E T  + I    A D D  G    + Y +  +    +  +F ++     +    KFD   E    + +T+ A DR    L         NVKV ++  D+NDN P F +  +       E    + I +K   +DK S     + Y++  +     R  F + +D+G + +K+PLD++   + Y  ++IA D        +++  V I + DVND  PQ        F   +Y  TV    ++IP+        L ++   DAD+D+KS  I   L+ +   E FR    I K  S  +   K+ DR+      + +  +   D+  N      ++ +NV D NDN P F  +    + EN    + D      V+A D D    +NA + Y I+ N     ++ FRID  TGK++    LDRE   +  + I V A D+G PS  G  N+ I V D+ND  P FE   Y   + E A + + V    A D D  + A+       + F Y L   + +      KDS     G + +   LD E           I V + R   A  +  + ++D ND+AP       +    +  +   GT I  + ATD D    A   + I R +DP
Sbjct: 1200 EVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFD--REKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHS----NLRYHLIGAGGG--RIPFGVRTDSGTIFVKEPLDFEASDQ-YHLVLIASDG-----RHNATTNVYIHIEDVNDNAPQ--------FEQQKYATTVIEEDVDIPKV-------LFNVHATDADQDEKSSRIVYRLEGQGADEVFR----IGKY-SGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDAD--EEAK------DNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRH-DAEAAVHVALVDRNDHAPHIHGATEH---RVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDP 1814

HSP 4 Score: 115.161 bits (287), Expect = 2.481e-25
Identity = 178/686 (25.95%), Postives = 290/686 (42.27%), Query Frame = 2 
Query:  578 DKIKSEYRFTVIGDPNFSEC--ISIQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDS-EQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYD--RGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAH-IQIEDADEDDKSFIDCSLD---------NKES-FRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN----ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--------RIDSFTGKMYIDAPLDRE---EQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPP-VFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVN--PRKFSATVSATITVLDCNDNAPK-FTAP 2515
            D  ++E  + ++G+ N  E     I + TG     ++ DRE      L  +  D + V +  L   N   K+ V ++  I D+NDN P +          ES E +   +      D+ +++ ++Y+L       + F +      + +  K  +D+E    +++ ++A D GR   ++T NV + + D+NDN PQF Q  +     + E   +  ++  V A D D  E++ RI Y ++    Q   + F +   +G ++L K LD D   G  S+ F+V A D       L   A V++ V D+ND          +P   +R  G     I EN  P  SD  + + ++  D DD +  + +++         N ES FR+  D N  K F   A +S DRE        I  R N +     E   N+ I VTD NDN P F         E T+     +    A D D     E +  +   Q   ++ +           S  G + +  PLD E   ++D +++  I V  G        ++ ++  D ND  P +    E+R +  ED    + +G   ATDRD G  AR   +  SD             +F I +D G + +   LDRE    Y++IIEA +  N   R+  A     + + D NDN P+ +T P
Sbjct: 1249 DGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASD-RSVSA--LPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKES-EGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFV--KEPLDFEASDQYHLVLIASD-GR--HNATTNVYIHIEDVNDNAPQFEQQKY-ATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEG---QGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGN--GLVGYADVQVNVRDIND---------NSPIFPERLFGY----IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRI--DQNTGKIF---AMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDAD----EEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLG-IRVSDGRHDAEAAVHVALV--DRNDHAPHIHGATEHRVR--EDVPRGTSIGRYTATDRDAGDTARFRINRQSDPK----------RQFTIDQD-GTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQMVA-----VYLQDVNDNGPEPYTVP 1876

HSP 5 Score: 102.834 bits (255), Expect = 1.490e-21
Identity = 174/735 (23.67%), Postives = 298/735 (40.54%), Query Frame = 2 
Query:  728 VKSIRLIFKNTYRKEGVDLEFEILDINDN-----RPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFF--NITIVAEDRGRPV-LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQ--------NGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPL---DYDRGHKSYKFIVIAKDSAPA---PYELSSS-ATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKS--FDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIG----QVEAIDKDLGKNAELRYTI-INVQPRSDARFRIDSF------TGKMYIDAPLDREEQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVFET---VEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTN--AFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDT------EKSIGTEIALFRATDAD-ENKNAELTYSIV---RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCD---SGLP 2755
            +  +++  +   R+  VDL   I D+NDN     RP++   V E +       Q+I    A DKD G+N+ I Y +     DN NF++ NS   +    + D D   +R F     + A D G PV LSS+  + +   + ND    F+    +    V E       ++++ A D D ++        NGR    +         + F +D  TG +KL+  +   D           VI +D       P +  +S AT+ I + DVN+  P+         ++    GT   + P         +  ++  D D      I  SL   +S    + +   ++ +L+ S    FDRE +  E V +   D G           + V D NDN P+F         E +  R   +G     V A D D   NAE+ Y++ I+     + +  +D F      +G++ +  P+  + Q  +   VIA D G P +L  +  + + V D     P ++T    +    + E+  +N  +   +A      +N+ + Y   +   P +   +    F KF+   +  E++I   LD E   +Y++ + A ++ +  + ++T +  + V D ND  P+FT  +    I  +       EK+ G  I   +A D D +    E+ Y IV      +   F +D  +G +F  +K   E      LTV   D   S LP
Sbjct:  610 LHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDI----PLNQTILKVTAVDKDTGDNSRITYSV-----DNHNFSI-NSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQY-TAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKM---------NLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPT--------IVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERP----SYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQ-KFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTS--RVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALP 1309

HSP 6 Score: 78.9518 bits (193), Expect = 2.742e-14
Identity = 93/398 (23.37%), Postives = 164/398 (41.21%), Query Frame = 2 
Query:  776 VDLEFEILDINDNRPMWPTNVV-------ELLYPESTEKQSIKLAIAYDKDIGENAMIKYYL--QPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRI-NYYIDPSMPQF--IRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSF--IDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPK-FAHKFNFNVNENTSYRNRDIGQVEAIDKD 1924
             D++  + DINDN P++P  +        E ++ +      ++ A  +D    ENA I+Y +    + +    F ++ +  ++      D +  ++R F I + A DRG P      NV + V D+NDN P F +  +    +V ET  + A ++  +A D D E    +  Y +      F    D+    S  G L++K+PLDY+   +   F +  + S        + A V + + D ND  P I+             G     + E++ P+ + +      D D  D +   I+   D K  F +  D        L  + + DRE+    ++ I   DN  N   + + + + D NDN P+ +         ENT        ++ A D+D
Sbjct: 1530 ADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQ-ARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYE--GSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDG---RHDAEAAVHVALVDRNDHAPHIH-------------GATEHRVREDV-PRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQD------GTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQMVAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRD 1901
[Close]
BLAST of Protocadherin-h vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4])

HSP 1 Score: 144.05 bits (362), Expect = 4.242e-34
Identity = 187/722 (25.90%), Postives = 318/722 (44.04%), Query Frame = 2 
Query:  791 EILDINDN-----RPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQ------PIYHDNLNF----NLENSENRLILTPKFDVDYETKRF-FNITIVAEDRGRP-VLSSTLNVKVTVIDINDNRPQFIQNV-FHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPS----------MPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSD---LAHIQIEDADEDDKSFIDCSLDNKESFRLISDIN--KVKSFILS-------ASKSFDRENQQTEHVRITCRD---------NGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQ-IPEDASVNSKVGVVQATDRDIG-KNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETK---PSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTE--KSIGTEIALFRATDADE--NKNAELTYSIVR---ATDPYVFNLDYTSGILF----LAKKIEGFRKLRLTVRVCDSGLPQK 2761
            E++DINDN     RP + T+V            S+    A+D D   NA I Y L+        + ++L+F    N  + E  LI      +  +T++F FN+  +A+D G P  L S+  V + V+D     P++  +    P   V E   +  +IL+  A+     +N  + Y +  S            QF  ++F   ++  E+ + + LDY++ + +Y   + A D       ++S+ T  ++V DVND +PQ        F  D + GT+   +  N + ++++   +  ++  D D D          N+  +R++ + N  + K F +         ++ FDRE      + +   D         NG N+++  + I + D NDN P F  +      + +     D+  ++A   DL K++ LRY +I         F + + +G +++  PLD E  D Y++ +IA D    + T   N+ I +ED+ND  P FE  +Y    I ED  +   +  V ATD D   K++RI Y          L    A E F+I K SG I +   LDR+     PS++ +++AI+  +           + V D NDN+P F   +    I  + E   S G      +A D D+   +NA + Y IVR        VF +D  +G +F    L ++I   R+  + VR  D G+P +
Sbjct:  968 EVVDINDNSPQFERPSYETSVSRF----EAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKP----IPMKTQKFIFNV--IADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQF--NKFENGNEWVEVVIMEGLDYEQVN-NYTLTLTATDMTS---RVASTKTFVVEVRDVNDVVPQ--------FTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQ-------NEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKA--HDLDKHSNLRYHLIGAG-GGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATT---NVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYR---------LEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAID-DDGNGLVGYADVQVNVRDINDNSPIFPERL-FGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSR 1641

HSP 2 Score: 140.969 bits (354), Expect = 2.993e-33
Identity = 159/594 (26.77%), Postives = 266/594 (44.78%), Query Frame = 2 
Query:  968 FNLENSENRLILTPKFDVDYET-KRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDR---GHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDE----IPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDD--KSFIDCSLDNKESFRLIS-----DINKVKSFILSASKSFDRENQQTEHVRITCRDNGK--------NENSKNIIINVTDKNDNPPKFAHKFNFN----VNENTSYRNR--DIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAP---LDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF-TAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDP 2647
            F ++ S   + LT   D D     +   + + A +  R    S +++ + + D+NDN P F + ++     V E   +   ILKVTA+DKD+  N RI Y +D          F ++S+ GE+  K  LD D+    H  Y+F V A+D    P  LSSSA + I+  + NDE    +P       T FV++   G   +               IQ  DAD D+   SF+D +  + +   L S      + K++  + +A  +   E +   ++ +  +D+G         + +   ++I + D N+N P+F     ++    + E T Y+     I +VEA D D   N ++ Y++   Q  S   F ID  TG +   +P    DRE +   ++TV A D+G+  L G     + V DIND  P FE   Y   +    +V + V  V A D D   NA I+Y    D      H+ N  + F+ + + SGEI +   +  +T+     +I   N + P    ++   T+ VLD    APK+ T+P     I++D    +   I   RA  + +++N+++ Y +  +  P
Sbjct:  585 FRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNR---ESHVDLTIRIDDVNDNVPTFTRPLY--TAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVD-------NHNFSINSN-GEISAKVRLDADQLNERHFVYRFNVTARDHG-EPVSLSSSAMIHIRTENTNDESAVFLPTSQY---TAFVAEDAQGGTPV-------------IQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLA---EAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGT-YKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTG-VLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQ-NDLDFFELVNRRSGEITLIKPIPMKTQKFIFNVIADDNGI-PEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGP 1141

HSP 3 Score: 116.316 bits (290), Expect = 1.180e-25
Identity = 175/663 (26.40%), Postives = 278/663 (41.93%), Query Frame = 2 
Query:  791 EILDINDNRPMWPTNVV-----ELLYP----ESTEKQSIKLAIAYDKDI-GENAMIKYYL--QPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSST-----LNVKVTVI--DINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTV---HINIPENMNPQQSDLAHIQIEDADEDDKSF-IDCSLDNK---ESFRLISDINKVKSFILSASKSFDRE---NQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD---IGQVEAIDKD--LGKNAELRYTII-NVQPRSDARFRIDSFTGKMYIDAPLDRE--EQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDS-----GEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDP 2647
            E+ D+ND  P +  ++      E + P    E T  + I    A D D  G    + Y +  +    +  +F ++     +    KFD   E    + +T+ A DR    L         NVKV ++  D+NDN P F +  +       E    + I +K   +DK S     + Y++  +     R  F + +D+G + +K+PLD++   + Y  ++IA D        +++  V I + DVND  PQ        F   +Y  TV    ++IP+        L ++   DAD+D+KS  I   L+ +   E FR    I K  S  +   K+ DR+      + +  +   D+  N      ++ +NV D NDN P F  +    + EN    + D      V+A D D    +NA + Y I+ N     ++ FRID  TGK++    LDRE   +  + I V A D+G PS  G  N+ I V D+ND  P FE   Y   + E A + + V    A D D  + A+       + F Y L   + +      KDS     G + +   LD E           I V + R   A  +  + ++D ND+AP       +    +  +   GT I  + ATD D    A   + I R +DP
Sbjct: 1200 EVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFD--REKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHS----NLRYHLIGAGGG--RIPFGVRTDSGTIFVKEPLDFEASDQ-YHLVLIASDG-----RHNATTNVYIHIEDVNDNAPQ--------FEQQKYATTVIEEDVDIPKV-------LFNVHATDADQDEKSSRIVYRLEGQGADEVFR----IGKY-SGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDAD--EEAK------DNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRH-DAEAAVHVALVDRNDHAPHIHGATEH---RVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDP 1814

HSP 4 Score: 115.161 bits (287), Expect = 2.481e-25
Identity = 178/686 (25.95%), Postives = 290/686 (42.27%), Query Frame = 2 
Query:  578 DKIKSEYRFTVIGDPNFSEC--ISIQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDS-EQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYD--RGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAH-IQIEDADEDDKSFIDCSLD---------NKES-FRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN----ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--------RIDSFTGKMYIDAPLDRE---EQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPP-VFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVN--PRKFSATVSATITVLDCNDNAPK-FTAP 2515
            D  ++E  + ++G+ N  E     I + TG     ++ DRE      L  +  D + V +  L   N   K+ V ++  I D+NDN P +          ES E +   +      D+ +++ ++Y+L       + F +      + +  K  +D+E    +++ ++A D GR   ++T NV + + D+NDN PQF Q  +     + E   +  ++  V A D D  E++ RI Y ++    Q   + F +   +G ++L K LD D   G  S+ F+V A D       L   A V++ V D+ND          +P   +R  G     I EN  P  SD  + + ++  D DD +  + +++         N ES FR+  D N  K F   A +S DRE        I  R N +     E   N+ I VTD NDN P F         E T+     +    A D D     E +  +   Q   ++ +           S  G + +  PLD E   ++D +++  I V  G        ++ ++  D ND  P +    E+R +  ED    + +G   ATDRD G  AR   +  SD             +F I +D G + +   LDRE    Y++IIEA +  N   R+  A     + + D NDN P+ +T P
Sbjct: 1249 DGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASD-RSVSA--LPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKES-EGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFV--KEPLDFEASDQYHLVLIASD-GR--HNATTNVYIHIEDVNDNAPQFEQQKY-ATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEG---QGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGN--GLVGYADVQVNVRDIND---------NSPIFPERLFGY----IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRI--DQNTGKIF---AMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDAD----EEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLG-IRVSDGRHDAEAAVHVALV--DRNDHAPHIHGATEHRVR--EDVPRGTSIGRYTATDRDAGDTARFRINRQSDPK----------RQFTIDQD-GTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQMVA-----VYLQDVNDNGPEPYTVP 1876

HSP 5 Score: 102.834 bits (255), Expect = 1.490e-21
Identity = 174/735 (23.67%), Postives = 298/735 (40.54%), Query Frame = 2 
Query:  728 VKSIRLIFKNTYRKEGVDLEFEILDINDN-----RPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFF--NITIVAEDRGRPV-LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQ--------NGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPL---DYDRGHKSYKFIVIAKDSAPA---PYELSSS-ATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKS--FDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIG----QVEAIDKDLGKNAELRYTI-INVQPRSDARFRIDSF------TGKMYIDAPLDREEQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVFET---VEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTN--AFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDT------EKSIGTEIALFRATDAD-ENKNAELTYSIV---RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCD---SGLP 2755
            +  +++  +   R+  VDL   I D+NDN     RP++   V E +       Q+I    A DKD G+N+ I Y +     DN NF++ NS   +    + D D   +R F     + A D G PV LSS+  + +   + ND    F+    +    V E       ++++ A D D ++        NGR    +         + F +D  TG +KL+  +   D           VI +D       P +  +S AT+ I + DVN+  P+         ++    GT   + P         +  ++  D D      I  SL   +S    + +   ++ +L+ S    FDRE +  E V +   D G           + V D NDN P+F         E +  R   +G     V A D D   NAE+ Y++ I+     + +  +D F      +G++ +  P+  + Q  +   VIA D G P +L  +  + + V D     P ++T    +    + E+  +N  +   +A      +N+ + Y   +   P +   +    F KF+   +  E++I   LD E   +Y++ + A ++ +  + ++T +  + V D ND  P+FT  +    I  +       EK+ G  I   +A D D +    E+ Y IV      +   F +D  +G +F  +K   E      LTV   D   S LP
Sbjct:  610 LHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDI----PLNQTILKVTAVDKDTGDNSRITYSV-----DNHNFSI-NSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQY-TAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKM---------NLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPT--------IVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERP----SYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQ-KFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTS--RVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALP 1309

HSP 6 Score: 78.9518 bits (193), Expect = 2.742e-14
Identity = 93/398 (23.37%), Postives = 164/398 (41.21%), Query Frame = 2 
Query:  776 VDLEFEILDINDNRPMWPTNVV-------ELLYPESTEKQSIKLAIAYDKDIGENAMIKYYL--QPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRI-NYYIDPSMPQF--IRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSF--IDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPK-FAHKFNFNVNENTSYRNRDIGQVEAIDKD 1924
             D++  + DINDN P++P  +        E ++ +      ++ A  +D    ENA I+Y +    + +    F ++ +  ++      D +  ++R F I + A DRG P      NV + V D+NDN P F +  +    +V ET  + A ++  +A D D E    +  Y +      F    D+    S  G L++K+PLDY+   +   F +  + S        + A V + + D ND  P I+             G     + E++ P+ + +      D D  D +   I+   D K  F +  D        L  + + DRE+    ++ I   DN  N   + + + + D NDN P+ +         ENT        ++ A D+D
Sbjct: 1530 ADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQ-ARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYE--GSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDG---RHDAEAAVHVALVDRNDHAPHIH-------------GATEHRVREDV-PRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQD------GTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQMVAVYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRD 1901
[Close]
BLAST of Protocadherin-h vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900)

HSP 1 Score: 228.024 bits (580), Expect = 8.378e-60
Identity = 206/692 (29.77%), Postives = 318/692 (45.95%), Query Frame = 2 
Query:  644 IQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFF---LDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTI----INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNL 2662
            I  ++G+   +  +DRET     L     D    +S R       R     ++ ++LD NDN P +      +  PE     TE  ++    A D D G NA I+Y    I   N    F++++    + L     +DYE+ R + + I A+D G P  S+T  + V VID NDN P+F  + F   ++V E   V   I++V A D D   N  I Y I        RD  F   +D  TG ++  KPLD +   + + F V+AKD    P   SSS  + +Q  DVND  P  N  +               N+ E+  P  + +  +   D DED +   + +  N      I+  N     +++ ++S D + ++   + +   D+G   ++  + IN+TD N+  P F +  ++ +V E+       +  V A D D+G NA++ Y++    IN     D  F I+  TG +  +APLDRE    Y +TV A D G PSL+ T ++ I V D+ND  P F++  Y+  I EDA V + V  V A+D D+G N RI Y  LSD       R      F I   SG I     LDRE+   + +   A++  +P   S+TV   I + D ND+ P F +  +   + +     +G+ +    A D DE  NA + YSI+   D   F+L
Sbjct:  523 IDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSER-------RTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY---AIIGGNTQSQFSIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQ--ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISE------RDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPPKSASSSVVITVQ--DVNDNDPAFNPKY------------YEANVGED-QPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRG--LITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSD-------RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTFAS--DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSL 1163

HSP 2 Score: 210.305 bits (534), Expect = 2.958e-54
Identity = 214/770 (27.79%), Postives = 346/770 (44.94%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIG--DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTY---RKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHD-NLNFNLENSENRL-----ILTPKFDVDYETKRFFNITIVAEDRGRPV---LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVE-AIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK-ESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGK--MYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV-RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            + EE+P G  +  V    RD   S   ++++   D        +  +TG+      +DRE +         V   R++  +     R     L+  +LD ND+ P +     E    E     S  + + A D+DIG+NA I+Y ++ +     L  + E    R+     +++ +  +D ET   +++ + A D         ++T +V+V V+D NDN PQF +  +       +    E   +  + A D D   N  I Y I     Q    QF +DS +G++ L KPLDY+   +SY+ ++ A+D   +P   S++  + + V D ND  P+        F + ++  +V  N+P   N     +  +Q  D+DE   + I  S+  + ++F L  D    ++  +   K  DRE Q     ++  +D G      S +++I V D NDN P F  K +  NV E+       +  V A D D  +++ L Y I     R   RF I S  G+  + I   LD +++  + +TV A D G  S T T  + I + D N+  P+FE   Y   + EDA V + V VV ATD D+G NA+I+Y    +    S++   + + F I   +G I+  + LDRET   Y + + A +  NP   S T    I V D NDNAP F +P+  +  SI  +  +GT +    A+D D   N  + Y +  R  +   F +D TSG +   K +  E      LT    D G P
Sbjct:  368 VLEEQPAGAAVTTVRA--RDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMD--------VHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSIDSMSGDVSLVKPLDYE-SVRSYRLVIRAQDGG-SPSR-SNTTQLLVNVIDANDNAPR--------FYTSQFQESVLENVPVGYN-----IIRVQAYDSDEGANAEITYSISERDDNFPLAVD---PRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQP-PGTPVTTVTATDPD--EDSRLHYEITTGNTR--GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEE----SINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA--SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP 1091

HSP 3 Score: 150.984 bits (380), Expect = 4.377e-36
Identity = 97/278 (34.89%), Postives = 146/278 (52.52%), Query Frame = 2 
Query: 1973 RSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPR--KFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTE---IALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            RS + F++DS TG +   A LDRE  D +   V+A D   P  +GT  + + V D ND  P FE  ++   I E A+V S V  ++ATD+DIGKNA I Y   +      L +      F+I   SG I   S LDRET  SY +++ A ++ + +  + +AT S  + VLD NDN P+F+       + +  ++  GTE   +A  RATDAD+  NA + Y+I+       F++D  SG + L K +  E  R  RL +R  D G P + +   +++
Sbjct:  402 RSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE--RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLV 677

HSP 4 Score: 112.079 bits (279), Expect = 2.906e-24
Identity = 157/642 (24.45%), Postives = 264/642 (41.12%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDK-IKSEYRFTVIG-DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGV-------DLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIR--DQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQI-NIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQ--IEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--RIDSFTGKMYIDAPLDREE-QDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLD 2380
            + E  P+G ++  V  +  D+   +E  +++   D NF   +++  +TG  +  K +DRE            +  R  F+   +  GV        +   + D+NDN P +     E    E     + +    A D D  E++ + Y +    +    F + +   R ++T    +DY+ ++ F +T+ A D G    S T  V + + D N+  P F    +  + +V+E   V   +L V+A D D   N +I Y ++      +   D F ++  TG +    PLD +     Y   V AKD   P+   LS +  VEI V DVND  P   +  +    + D   GT  I +  + +P       I+  + D D +D SF+               I+     I + +K  DRE+    H+     D G    S  +   I + D ND+PP FA  K    V EN+   +  +G++ A D D G NA + Y+II     +      R  S   ++     LD E  +  + + V A     P L    +I ILV D+ND  PV    +  F    D   + ++G + A D D+           SD   Y +   N     ++   SG ++++ +L+
Sbjct:  698 VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDRE------------EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEIT-TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY--SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRET-TSGYLLTVTAKDGGNPS---LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS-DPDVGLNGRIKYLLSDRDIEDGSFV---------------IDPTSGTIRT-NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSV-VGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA---SPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADV-----------SDKLHYRILSGNNANLLRLNSSSGGLVLSPQLN 1282
[Close]
BLAST of Protocadherin-h vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899)

HSP 1 Score: 228.024 bits (580), Expect = 8.970e-60
Identity = 206/692 (29.77%), Postives = 318/692 (45.95%), Query Frame = 2 
Query:  644 IQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFF---LDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTI----INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNL 2662
            I  ++G+   +  +DRET     L     D    +S R       R     ++ ++LD NDN P +      +  PE     TE  ++    A D D G NA I+Y    I   N    F++++    + L     +DYE+ R + + I A+D G P  S+T  + V VID NDN P+F  + F   ++V E   V   I++V A D D   N  I Y I        RD  F   +D  TG ++  KPLD +   + + F V+AKD    P   SSS  + +Q  DVND  P  N  +               N+ E+  P  + +  +   D DED +   + +  N      I+  N     +++ ++S D + ++   + +   D+G   ++  + IN+TD N+  P F +  ++ +V E+       +  V A D D+G NA++ Y++    IN     D  F I+  TG +  +APLDRE    Y +TV A D G PSL+ T ++ I V D+ND  P F++  Y+  I EDA V + V  V A+D D+G N RI Y  LSD       R      F I   SG I     LDRE+   + +   A++  +P   S+TV   I + D ND+ P F +  +   + +     +G+ +    A D DE  NA + YSI+   D   F+L
Sbjct:  523 IDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSER-------RTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY---AIIGGNTQSQFSIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQ--ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISE------RDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPPKSASSSVVITVQ--DVNDNDPAFNPKY------------YEANVGED-QPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRG--LITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSD-------RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTFAS--DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSL 1163

HSP 2 Score: 210.305 bits (534), Expect = 2.785e-54
Identity = 214/770 (27.79%), Postives = 346/770 (44.94%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIG--DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTY---RKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHD-NLNFNLENSENRL-----ILTPKFDVDYETKRFFNITIVAEDRGRPV---LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVE-AIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK-ESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGK--MYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV-RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            + EE+P G  +  V    RD   S   ++++   D        +  +TG+      +DRE +         V   R++  +     R     L+  +LD ND+ P +     E    E     S  + + A D+DIG+NA I+Y ++ +     L  + E    R+     +++ +  +D ET   +++ + A D         ++T +V+V V+D NDN PQF +  +       +    E   +  + A D D   N  I Y I     Q    QF +DS +G++ L KPLDY+   +SY+ ++ A+D   +P   S++  + + V D ND  P+        F + ++  +V  N+P   N     +  +Q  D+DE   + I  S+  + ++F L  D    ++  +   K  DRE Q     ++  +D G      S +++I V D NDN P F  K +  NV E+       +  V A D D  +++ L Y I     R   RF I S  G+  + I   LD +++  + +TV A D G  S T T  + I + D N+  P+FE   Y   + EDA V + V VV ATD D+G NA+I+Y    +    S++   + + F I   +G I+  + LDRET   Y + + A +  NP   S T    I V D NDNAP F +P+  +  SI  +  +GT +    A+D D   N  + Y +  R  +   F +D TSG +   K +  E      LT    D G P
Sbjct:  368 VLEEQPAGAAVTTVRA--RDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMD--------VHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSIDSMSGDVSLVKPLDYE-SVRSYRLVIRAQDGG-SPSR-SNTTQLLVNVIDANDNAPR--------FYTSQFQESVLENVPVGYN-----IIRVQAYDSDEGANAEITYSISERDDNFPLAVD---PRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQP-PGTPVTTVTATDPD--EDSRLHYEITTGNTR--GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEE----SINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA--SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP 1091

HSP 3 Score: 150.984 bits (380), Expect = 4.230e-36
Identity = 97/278 (34.89%), Postives = 146/278 (52.52%), Query Frame = 2 
Query: 1973 RSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPR--KFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTE---IALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            RS + F++DS TG +   A LDRE  D +   V+A D   P  +GT  + + V D ND  P FE  ++   I E A+V S V  ++ATD+DIGKNA I Y   +      L +      F+I   SG I   S LDRET  SY +++ A ++ + +  + +AT S  + VLD NDN P+F+       + +  ++  GTE   +A  RATDAD+  NA + Y+I+       F++D  SG + L K +  E  R  RL +R  D G P + +   +++
Sbjct:  402 RSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE--RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLV 677

HSP 4 Score: 112.079 bits (279), Expect = 2.693e-24
Identity = 157/642 (24.45%), Postives = 264/642 (41.12%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDK-IKSEYRFTVIG-DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGV-------DLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIR--DQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQI-NIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQ--IEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--RIDSFTGKMYIDAPLDREE-QDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLD 2380
            + E  P+G ++  V  +  D+   +E  +++   D NF   +++  +TG  +  K +DRE            +  R  F+   +  GV        +   + D+NDN P +     E    E     + +    A D D  E++ + Y +    +    F + +   R ++T    +DY+ ++ F +T+ A D G    S T  V + + D N+  P F    +  + +V+E   V   +L V+A D D   N +I Y ++      +   D F ++  TG +    PLD +     Y   V AKD   P+   LS +  VEI V DVND  P   +  +    + D   GT  I +  + +P       I+  + D D +D SF+               I+     I + +K  DRE+    H+     D G    S  +   I + D ND+PP FA  K    V EN+   +  +G++ A D D G NA + Y+II     +      R  S   ++     LD E  +  + + V A     P L    +I ILV D+ND  PV    +  F    D   + ++G + A D D+           SD   Y +   N     ++   SG ++++ +L+
Sbjct:  698 VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDRE------------EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEIT-TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY--SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRET-TSGYLLTVTAKDGGNPS---LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS-DPDVGLNGRIKYLLSDRDIEDGSFV---------------IDPTSGTIRT-NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSV-VGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA---SPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADV-----------SDKLHYRILSGNNANLLRLNSSSGGLVLSPQLN 1282
[Close]
BLAST of Protocadherin-h vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0300578)

HSP 1 Score: 228.024 bits (580), Expect = 8.970e-60
Identity = 206/692 (29.77%), Postives = 318/692 (45.95%), Query Frame = 2 
Query:  644 IQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFF---LDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTI----INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNL 2662
            I  ++G+   +  +DRET     L     D    +S R       R     ++ ++LD NDN P +      +  PE     TE  ++    A D D G NA I+Y    I   N    F++++    + L     +DYE+ R + + I A+D G P  S+T  + V VID NDN P+F  + F   ++V E   V   I++V A D D   N  I Y I        RD  F   +D  TG ++  KPLD +   + + F V+AKD    P   SSS  + +Q  DVND  P  N  +               N+ E+  P  + +  +   D DED +   + +  N      I+  N     +++ ++S D + ++   + +   D+G   ++  + IN+TD N+  P F +  ++ +V E+       +  V A D D+G NA++ Y++    IN     D  F I+  TG +  +APLDRE    Y +TV A D G PSL+ T ++ I V D+ND  P F++  Y+  I EDA V + V  V A+D D+G N RI Y  LSD       R      F I   SG I     LDRE+   + +   A++  +P   S+TV   I + D ND+ P F +  +   + +     +G+ +    A D DE  NA + YSI+   D   F+L
Sbjct:  523 IDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSER-------RTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY---AIIGGNTQSQFSIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQ--ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISE------RDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPPKSASSSVVITVQ--DVNDNDPAFNPKY------------YEANVGED-QPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRG--LITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSD-------RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTFAS--DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSL 1163

HSP 2 Score: 210.305 bits (534), Expect = 2.785e-54
Identity = 214/770 (27.79%), Postives = 346/770 (44.94%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIG--DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTY---RKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHD-NLNFNLENSENRL-----ILTPKFDVDYETKRFFNITIVAEDRGRPV---LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVE-AIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK-ESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGK--MYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV-RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            + EE+P G  +  V    RD   S   ++++   D        +  +TG+      +DRE +         V   R++  +     R     L+  +LD ND+ P +     E    E     S  + + A D+DIG+NA I+Y ++ +     L  + E    R+     +++ +  +D ET   +++ + A D         ++T +V+V V+D NDN PQF +  +       +    E   +  + A D D   N  I Y I     Q    QF +DS +G++ L KPLDY+   +SY+ ++ A+D   +P   S++  + + V D ND  P+        F + ++  +V  N+P   N     +  +Q  D+DE   + I  S+  + ++F L  D    ++  +   K  DRE Q     ++  +D G      S +++I V D NDN P F  K +  NV E+       +  V A D D  +++ L Y I     R   RF I S  G+  + I   LD +++  + +TV A D G  S T T  + I + D N+  P+FE   Y   + EDA V + V VV ATD D+G NA+I+Y    +    S++   + + F I   +G I+  + LDRET   Y + + A +  NP   S T    I V D NDNAP F +P+  +  SI  +  +GT +    A+D D   N  + Y +  R  +   F +D TSG +   K +  E      LT    D G P
Sbjct:  368 VLEEQPAGAAVTTVRA--RDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMD--------VHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSIDSMSGDVSLVKPLDYE-SVRSYRLVIRAQDGG-SPSR-SNTTQLLVNVIDANDNAPR--------FYTSQFQESVLENVPVGYN-----IIRVQAYDSDEGANAEITYSISERDDNFPLAVD---PRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQP-PGTPVTTVTATDPD--EDSRLHYEITTGNTR--GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEE----SINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA--SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP 1091

HSP 3 Score: 150.984 bits (380), Expect = 4.230e-36
Identity = 97/278 (34.89%), Postives = 146/278 (52.52%), Query Frame = 2 
Query: 1973 RSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPR--KFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTE---IALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            RS + F++DS TG +   A LDRE  D +   V+A D   P  +GT  + + V D ND  P FE  ++   I E A+V S V  ++ATD+DIGKNA I Y   +      L +      F+I   SG I   S LDRET  SY +++ A ++ + +  + +AT S  + VLD NDN P+F+       + +  ++  GTE   +A  RATDAD+  NA + Y+I+       F++D  SG + L K +  E  R  RL +R  D G P + +   +++
Sbjct:  402 RSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE--RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLV 677

HSP 4 Score: 112.079 bits (279), Expect = 2.693e-24
Identity = 157/642 (24.45%), Postives = 264/642 (41.12%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDK-IKSEYRFTVIG-DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGV-------DLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIR--DQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQI-NIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQ--IEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--RIDSFTGKMYIDAPLDREE-QDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLD 2380
            + E  P+G ++  V  +  D+   +E  +++   D NF   +++  +TG  +  K +DRE            +  R  F+   +  GV        +   + D+NDN P +     E    E     + +    A D D  E++ + Y +    +    F + +   R ++T    +DY+ ++ F +T+ A D G    S T  V + + D N+  P F    +  + +V+E   V   +L V+A D D   N +I Y ++      +   D F ++  TG +    PLD +     Y   V AKD   P+   LS +  VEI V DVND  P   +  +    + D   GT  I +  + +P       I+  + D D +D SF+               I+     I + +K  DRE+    H+     D G    S  +   I + D ND+PP FA  K    V EN+   +  +G++ A D D G NA + Y+II     +      R  S   ++     LD E  +  + + V A     P L    +I ILV D+ND  PV    +  F    D   + ++G + A D D+           SD   Y +   N     ++   SG ++++ +L+
Sbjct:  698 VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDRE------------EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEIT-TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY--SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRET-TSGYLLTVTAKDGGNPS---LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS-DPDVGLNGRIKYLLSDRDIEDGSFV---------------IDPTSGTIRT-NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSV-VGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA---SPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADV-----------SDKLHYRILSGNNANLLRLNSSSGGLVLSPQLN 1282
[Close]
BLAST of Protocadherin-h vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0330601)

HSP 1 Score: 228.024 bits (580), Expect = 9.195e-60
Identity = 206/692 (29.77%), Postives = 318/692 (45.95%), Query Frame = 2 
Query:  644 IQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFF---LDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTI----INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNL 2662
            I  ++G+   +  +DRET     L     D    +S R       R     ++ ++LD NDN P +      +  PE     TE  ++    A D D G NA I+Y    I   N    F++++    + L     +DYE+ R + + I A+D G P  S+T  + V VID NDN P+F  + F   ++V E   V   I++V A D D   N  I Y I        RD  F   +D  TG ++  KPLD +   + + F V+AKD    P   SSS  + +Q  DVND  P  N  +               N+ E+  P  + +  +   D DED +   + +  N      I+  N     +++ ++S D + ++   + +   D+G   ++  + IN+TD N+  P F +  ++ +V E+       +  V A D D+G NA++ Y++    IN     D  F I+  TG +  +APLDRE    Y +TV A D G PSL+ T ++ I V D+ND  P F++  Y+  I EDA V + V  V A+D D+G N RI Y  LSD       R      F I   SG I     LDRE+   + +   A++  +P   S+TV   I + D ND+ P F +  +   + +     +G+ +    A D DE  NA + YSI+   D   F+L
Sbjct:  523 IDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSER-------RTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY---AIIGGNTQSQFSIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQ--ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISE------RDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPPKSASSSVVITVQ--DVNDNDPAFNPKY------------YEANVGED-QPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRG--LITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSD-------RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTFAS--DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSL 1163

HSP 2 Score: 209.92 bits (533), Expect = 3.107e-54
Identity = 214/770 (27.79%), Postives = 346/770 (44.94%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIG--DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTY---RKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHD-NLNFNLENSENRL-----ILTPKFDVDYETKRFFNITIVAEDRGRPV---LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVE-AIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK-ESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGK--MYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV-RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            + EE+P G  +  V    RD   S   ++++   D        +  +TG+      +DRE +         V   R++  +     R     L+  +LD ND+ P +     E    E     S  + + A D+DIG+NA I+Y ++ +     L  + E    R+     +++ +  +D ET   +++ + A D         ++T +V+V V+D NDN PQF +  +       +    E   +  + A D D   N  I Y I     Q    QF +DS +G++ L KPLDY+   +SY+ ++ A+D   +P   S++  + + V D ND  P+        F + ++  +V  N+P   N     +  +Q  D+DE   + I  S+  + ++F L  D    ++  +   K  DRE Q     ++  +D G      S +++I V D NDN P F  K +  NV E+       +  V A D D  +++ L Y I     R   RF I S  G+  + I   LD +++  + +TV A D G  S T T  + I + D N+  P+FE   Y   + EDA V + V VV ATD D+G NA+I+Y    +    S++   + + F I   +G I+  + LDRET   Y + + A +  NP   S T    I V D NDNAP F +P+  +  SI  +  +GT +    A+D D   N  + Y +  R  +   F +D TSG +   K +  E      LT    D G P
Sbjct:  368 VLEEQPAGAAVTTVRA--RDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMD--------VHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSIDSMSGDVSLVKPLDYE-SVRSYRLVIRAQDGG-SPSR-SNTTQLLVNVIDANDNAPR--------FYTSQFQESVLENVPVGYN-----IIRVQAYDSDEGANAEITYSISERDDNFPLAVD---PRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQP-PGTPVTTVTATDPD--EDSRLHYEITTGNTR--GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEE----SINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA--SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP 1091

HSP 3 Score: 150.984 bits (380), Expect = 4.471e-36
Identity = 97/278 (34.89%), Postives = 146/278 (52.52%), Query Frame = 2 
Query: 1973 RSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPR--KFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTE---IALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            RS + F++DS TG +   A LDRE  D +   V+A D   P  +GT  + + V D ND  P FE  ++   I E A+V S V  ++ATD+DIGKNA I Y   +      L +      F+I   SG I   S LDRET  SY +++ A ++ + +  + +AT S  + VLD NDN P+F+       + +  ++  GTE   +A  RATDAD+  NA + Y+I+       F++D  SG + L K +  E  R  RL +R  D G P + +   +++
Sbjct:  402 RSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE--RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLV 677

HSP 4 Score: 112.079 bits (279), Expect = 2.771e-24
Identity = 157/642 (24.45%), Postives = 264/642 (41.12%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDK-IKSEYRFTVIG-DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGV-------DLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIR--DQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQI-NIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQ--IEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--RIDSFTGKMYIDAPLDREE-QDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLD 2380
            + E  P+G ++  V  +  D+   +E  +++   D NF   +++  +TG  +  K +DRE            +  R  F+   +  GV        +   + D+NDN P +     E    E     + +    A D D  E++ + Y +    +    F + +   R ++T    +DY+ ++ F +T+ A D G    S T  V + + D N+  P F    +  + +V+E   V   +L V+A D D   N +I Y ++      +   D F ++  TG +    PLD +     Y   V AKD   P+   LS +  VEI V DVND  P   +  +    + D   GT  I +  + +P       I+  + D D +D SF+               I+     I + +K  DRE+    H+     D G    S  +   I + D ND+PP FA  K    V EN+   +  +G++ A D D G NA + Y+II     +      R  S   ++     LD E  +  + + V A     P L    +I ILV D+ND  PV    +  F    D   + ++G + A D D+           SD   Y +   N     ++   SG ++++ +L+
Sbjct:  698 VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDRE------------EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEIT-TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY--SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETT-SGYLLTVTAKDGGNPS---LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS-DPDVGLNGRIKYLLSDRDIEDGSFV---------------IDPTSGTIRT-NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSV-VGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA---SPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADV-----------SDKLHYRILSGNNANLLRLNSSSGGLVLSPQLN 1282
[Close]
BLAST of Protocadherin-h vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463)

HSP 1 Score: 228.024 bits (580), Expect = 9.973e-60
Identity = 206/692 (29.77%), Postives = 318/692 (45.95%), Query Frame = 2 
Query:  644 IQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFF---LDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTI----INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNL 2662
            I  ++G+   +  +DRET     L     D    +S R       R     ++ ++LD NDN P +      +  PE     TE  ++    A D D G NA I+Y    I   N    F++++    + L     +DYE+ R + + I A+D G P  S+T  + V VID NDN P+F  + F   ++V E   V   I++V A D D   N  I Y I        RD  F   +D  TG ++  KPLD +   + + F V+AKD    P   SSS  + +Q  DVND  P  N  +               N+ E+  P  + +  +   D DED +   + +  N      I+  N     +++ ++S D + ++   + +   D+G   ++  + IN+TD N+  P F +  ++ +V E+       +  V A D D+G NA++ Y++    IN     D  F I+  TG +  +APLDRE    Y +TV A D G PSL+ T ++ I V D+ND  P F++  Y+  I EDA V + V  V A+D D+G N RI Y  LSD       R      F I   SG I     LDRE+   + +   A++  +P   S+TV   I + D ND+ P F +  +   + +     +G+ +    A D DE  NA + YSI+   D   F+L
Sbjct:  523 IDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSER-------RTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRY---AIIGGNTQSQFSIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQ--ESVLENVPVGYNIIRVQAYDSDEGANAEITYSISE------RDDNFPLAVDPRTGWVQTIKPLDREEQGR-FAFQVVAKDGGVPPKSASSSVVITVQ--DVNDNDPAFNPKY------------YEANVGED-QPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRG--LITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPV-GTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP-FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKY-LLSD-------RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRLEDVNDSPPTFAS--DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSL 1163

HSP 2 Score: 209.92 bits (533), Expect = 3.285e-54
Identity = 214/770 (27.79%), Postives = 346/770 (44.94%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIG--DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTY---RKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHD-NLNFNLENSENRL-----ILTPKFDVDYETKRFFNITIVAEDRGRPV---LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVE-AIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK-ESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGK--MYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV-RATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            + EE+P G  +  V    RD   S   ++++   D        +  +TG+      +DRE +         V   R++  +     R     L+  +LD ND+ P +     E    E     S  + + A D+DIG+NA I+Y ++ +     L  + E    R+     +++ +  +D ET   +++ + A D         ++T +V+V V+D NDN PQF +  +       +    E   +  + A D D   N  I Y I     Q    QF +DS +G++ L KPLDY+   +SY+ ++ A+D   +P   S++  + + V D ND  P+        F + ++  +V  N+P   N     +  +Q  D+DE   + I  S+  + ++F L  D    ++  +   K  DRE Q     ++  +D G      S +++I V D NDN P F  K +  NV E+       +  V A D D  +++ L Y I     R   RF I S  G+  + I   LD +++  + +TV A D G  S T T  + I + D N+  P+FE   Y   + EDA V + V VV ATD D+G NA+I+Y    +    S++   + + F I   +G I+  + LDRET   Y + + A +  NP   S T    I V D NDNAP F +P+  +  SI  +  +GT +    A+D D   N  + Y +  R  +   F +D TSG +   K +  E      LT    D G P
Sbjct:  368 VLEEQPAGAAVTTVRA--RDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMD--------VHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ---SQFSIDSMSGDVSLVKPLDYE-SVRSYRLVIRAQDGG-SPSR-SNTTQLLVNVIDANDNAPR--------FYTSQFQESVLENVPVGYN-----IIRVQAYDSDEGANAEITYSISERDDNFPLAVD---PRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQP-PGTPVTTVTATDPD--EDSRLHYEITTGNTR--GRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTAT--VHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEE----SINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNP-SLSDTTDVEIGVTDVNDNAPAFKSPLYQA--SILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSP 1091

HSP 3 Score: 150.984 bits (380), Expect = 4.496e-36
Identity = 97/278 (34.89%), Postives = 146/278 (52.52%), Query Frame = 2 
Query: 1973 RSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPR--KFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTE---IALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            RS + F++DS TG +   A LDRE  D +   V+A D   P  +GT  + + V D ND  P FE  ++   I E A+V S V  ++ATD+DIGKNA I Y   +      L +      F+I   SG I   S LDRET  SY +++ A ++ + +  + +AT S  + VLD NDN P+F+       + +  ++  GTE   +A  RATDAD+  NA + Y+I+       F++D  SG + L K +  E  R  RL +R  D G P + +   +++
Sbjct:  402 RSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSE--RTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLV 677

HSP 4 Score: 112.079 bits (279), Expect = 3.035e-24
Identity = 157/642 (24.45%), Postives = 264/642 (41.12%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDK-IKSEYRFTVIG-DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGV-------DLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIR--DQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQI-NIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQ--IEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARF--RIDSFTGKMYIDAPLDREE-QDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLD 2380
            + E  P+G ++  V  +  D+   +E  +++   D NF   +++  +TG  +  K +DRE            +  R  F+   +  GV        +   + D+NDN P +     E    E     + +    A D D  E++ + Y +    +    F + +   R ++T    +DY+ ++ F +T+ A D G    S T  V + + D N+  P F    +  + +V+E   V   +L V+A D D   N +I Y ++      +   D F ++  TG +    PLD +     Y   V AKD   P+   LS +  VEI V DVND  P   +  +    + D   GT  I +  + +P       I+  + D D +D SF+               I+     I + +K  DRE+    H+     D G    S  +   I + D ND+PP FA  K    V EN+   +  +G++ A D D G NA + Y+II     +      R  S   ++     LD E  +  + + V A     P L    +I ILV D+ND  PV    +  F    D   + ++G + A D D+           SD   Y +   N     ++   SG ++++ +L+
Sbjct:  698 VLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDRE------------EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEIT-TGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG--RSDTATVHINITDANNFAPIFENAPY--SASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETT-SGYLLTVTAKDGGNPS---LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAAS-DPDVGLNGRIKYLLSDRDIEDGSFV---------------IDPTSGTIRT-NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSV-VGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRAA---SPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADV-----------SDKLHYRILSGNNANLLRLNSSSGGLVLSPQLN 1282
[Close]
BLAST of Protocadherin-h vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 283.108 bits (723), Expect = 6.410e-79
Identity = 262/863 (30.36%), Postives = 408/863 (47.28%), Query Frame = 2 
Query:  473 LFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLR------DKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADN-QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQKCSEDLMIIV----TTTKSTF----------TDAENSNGDNNSLVKT-GITESNGAIIA-CLIVIFVILVMAMV 2932
            LF++ +  +  K+Y  + EE+P    +  + K L        K+ S  +F  +        + ++  TG +     RIDRE LC+    + +C   I +          V + F I DINDN P++ + V+ +  PE+T   S   +  A+D DIG N +  Y L     +   F L+     +I TP+ D          +D ETK  F + I  ED G P  SST  ++VTV D+NDNRP F  +    N  V E   +   +  + A D D   N +I++     +    +  F +DS TG + +K+PLD +  +  +K IV+A D +  P    S ATV + V D+ND +P I+    T ++ +  NGTV ++  EN  P  + +A I + D D D    + C  D+   FRL    N    F+L  +   D E  +   +RI   D+GK     S  ++I + D+NDN P F   +   ++ EN     + I ++ A D D G NA + Y++    P +   F IDS +G + +   LDRE+Q+ Y+ TVIA D G   L     + ++V+D ND  P F   EY F +PE+  +   VG++  TD D G NA ++   +           N  + F I   +G I      DRE + SY+ +++A++     + ++    TI V+D NDN P F  P +N S   + +  S G+ +    A D D   NAEL YSI+  +   +F +D T+G + L +KI    +G    RL V+V D G P+      ++ +    T + +TF          T  E + GDN+   +T G      AIIA  + VI VI V A+V
Sbjct:   17 LFLMCRAQE--KDY-TVKEEQPENVRIGNLRKDLNLNLDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSVSE---FGLD-----IIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPSTKRHFAIDSTTGLITVKQPLDREV-NPVHKLIVLASDGSSTP----SRATVIVNVTDINDNVPSID----TRYIMNLVNGTVLLS--ENA-PLNTKIALITVTDRDSDLNGKVTCYTDHDVPFRLKPVFND--QFLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLI-KISATDADSGSNALIIYSL---GPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSII-----------NGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVD-AGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLH--RLVVKVKDLGQPESLHAIALVHLFVNDTVSNATFIQEQLRKSLETPLERNIGDNDVTPQTNGYVIVVIAIIAGTMTVILVIFVTALV 834
[Close]
BLAST of Protocadherin-h vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 272.322 bits (695), Expect = 3.985e-75
Identity = 241/786 (30.66%), Postives = 376/786 (47.84%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVS--KFLRDKIKSEYRFTVIGDPNFSECISIQDKTG---MTKIKKRIDRETLCADNQDGK-CVKSIRLIFKNTYRKEG---VDLEFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINY----YIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVN-ENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            +R+ EE+P  T +  ++  + L D     Y+  V G P     + +  KTG    T+I   IDRETL      GK C     +   +  + +    ++   E+ DINDN P +P+ V+ L  PE+T   ++  + +A DKD   N +  Y L         F L+ +E+R    P+      +D E K  +++TI A D G P   S+  ++V + D NDN P+F ++ +     V E + +   +L+V A D D   NG I Y     IDP +P+ +R    +D  +G + +K PLD +    + KF V+A+D  P+P   SS   V I V D ND  P + I      +    +G    NI E+M P  + +A +Q+ D DE + + + C +     F+L     S ++  + + L  +   D E  +   V I   D+G     ++ ++ + VTD NDN P F+    F V     +     + +V A D D G NAEL Y+II     +   F ID  +G++   +PLDRE +D Y   V A D+G PS  GT  ++I V D ND  P F    Y F + E+    S VG+V   D D G+NA++      D             KF I+  +G I+ +   DRE + SY+  ++A++  +P + S+ V  TI VLD NDNAP  T P N+S I +    +  + + +  A D D   NAEL YSI       +F +  ++G + L K++     G    RL ++V D G P + +  L+ I
Sbjct:   27 YRVHEEQPPSTLIGSLAADQGLPD-TGHLYKLEV-GAP----YLRVDGKTGDIFTTEIP--IDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYE--AEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDP-VPKLLR----IDRSSGIIYVKGPLDREE-INNLKFYVVARDKGPSPK--SSKTYVSIDVTDQNDNAPAVEIRGIG--LVTHSDGVA--NISEDM-PVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTL-FEVEFAEENQPGEKVVEVVASDADSGTNAELVYSII-ADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPD-----------VGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPR-SSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHSGLH--RLVIKVSDRGKPSRHAIALVHI 773

HSP 2 Score: 134.035 bits (336), Expect = 4.488e-31
Identity = 172/617 (27.88%), Postives = 263/617 (42.63%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKF---LRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETL------CADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPES-----TEKQSIKLAIAY----DKDIGENAMI--------KYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYI--DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKS-YKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD--IGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILV-EDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARIS 2269
            + E  PIG  + +V      L    + EY      DP   + + I   +G+  +K  +DRE +            G   KS +     TY      +  ++ D NDN P      + L+         +E   +  A+A     DKD GENA++         + L+P    +++     ++ +  L     +DYE  R + + IVA D G P LSST ++KV V D NDN P F   +F    A  E       +++V A D DS  N  + Y I  D S     R  F +D ++GE++ + PLD  R HK  Y+F V A D     +    +ATV I+V D ND  P+        F+   Y+     ++ ENM P  S +  + ++D DE + + +  S++  +  + +  I      ILS S SFDRE + +   R+   D G    S    + INV D+NDN P      N +    +     D  +  VEA D D G NAEL Y+I    P     F I    G++ +   L R+    + + +   D+G+PS      + I V E I ++  V   V +    P D  +        A D D G  A+ S
Sbjct:  252 VAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDP-VPKLLRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSK-----TY------VSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVD-----NKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFA--EENQPGEKVVEVVASDADSGTNAELVYSIIADSST----RGLFEIDPNSGEVRARSPLD--REHKDRYEFRVTAADKGVPSHR--GTATVVIKVLDRNDNDPK--------FMLSGYS----FSVLENM-PPLSPVGMVTVQDMDEGENAQVQLSVE-PDVGKFV--IQNGTGTILS-SISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHD--LFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIANVSHVEALVGHSLYTPLDMDI--------AGDPDYGLAAQRS 814
[Close]
BLAST of Protocadherin-h vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 271.937 bits (694), Expect = 2.091e-74
Identity = 245/788 (31.09%), Postives = 377/788 (47.84%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVS--KFLRDKIKSEYRFTVIGDPNFSECISIQDKTG---MTKIKKRIDRETLCADNQDGK-C-----VKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINY----YIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVN-ENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            +R+ EE+P  T +  ++  + L D     Y+  V G P     + +  KTG    T+I   IDRETL      GK C     V    LI   + R   ++   E+ DINDN P +P+ V+ L  PE+T   ++  + +A DKD   N +  Y L         F L+ +E+R    P+      +D E K  +++TI A D G P   S+  ++V + D NDN P+F ++ +     V E + +   +L+V A D D   NG I Y     IDP +P+ +R    +D  +G + +K PLD +    + KF V+A+D  P+P   SS   V I V D ND  P + I      +    +G    NI E+M P  + +A +Q+ D DE + + + C +     F+L     S ++  + + L  +   D E  +   V I   D+G     ++ ++ + VTD NDN P F+    F V     +     + +V A D D G NAEL Y+II     +   F ID  +G++   +PLDRE +D Y   V A D+G PS  GT  ++I V D ND  P F    Y F + E+    S VG+V   D D G+NA++      D             KF I+  +G I+ +   DRE + SY+  ++A++  +P + S+ V  TI VLD NDNAP  T P N+S I +    +  + + +  A D D   NAEL YSI       +F +  ++G + L K++     G    RL ++V D G P + +  L+ I
Sbjct:   27 YRVHEEQPPSTLIGSLAADQGLPD-TGHLYKLEV-GAP----YLRVDGKTGDIFTTEIP--IDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRL--IEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYE--AEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDP-VPKLLR----IDRSSGIIYVKGPLDREE-INNLKFYVVARDKGPSPK--SSKTYVSIDVTDQNDNAPAVEIRGIG--LVTHSDGVA--NISEDM-PVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTL-FEVEFAEENQPGEKVVEVVASDADSGTNAELVYSII-ADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPD-----------VGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPR-SSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHSGLH--RLVIKVSDRGKPSRHAIALVHI 773

HSP 2 Score: 133.265 bits (334), Expect = 8.682e-31
Identity = 172/617 (27.88%), Postives = 263/617 (42.63%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKF---LRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETL------CADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPES-----TEKQSIKLAIAY----DKDIGENAMI--------KYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYI--DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKS-YKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD--IGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILV-EDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARIS 2269
            + E  PIG  + +V      L    + EY      DP   + + I   +G+  +K  +DRE +            G   KS +     TY      +  ++ D NDN P      + L+         +E   +  A+A     DKD GENA++         + L+P    +++     ++ +  L     +DYE  R + + IVA D G P LSST ++KV V D NDN P F   +F    A  E       +++V A D DS  N  + Y I  D S     R  F +D ++GE++ + PLD  R HK  Y+F V A D     +    +ATV I+V D ND  P+        F+   Y+     ++ ENM P  S +  + ++D DE + + +  S++  +  + +  I      ILS S SFDRE + +   R+   D G    S    + INV D+NDN P      N +    +     D  +  VEA D D G NAEL Y+I    P     F I    G++ +   L R+    + + +   D+G+PS      + I V E I ++  V   V +    P D  +        A D D G  A+ S
Sbjct:  252 VAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDP-VPKLLRIDRSSGIIYVKGPLDREEINNLKFYVVARDKGPSPKSSK-----TY------VSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVD-----NKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFA--EENQPGEKVVEVVASDADSGTNAELVYSIIADSST----RGLFEIDPNSGEVRARSPLD--REHKDRYEFRVTAADKGVPSHR--GTATVVIKVLDRNDNDPK--------FMLSGYS----FSVLENM-PPLSPVGMVTVQDMDEGENAQVQLSVE-PDVGKFV--IQNGTGTILS-SISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHD--LFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIANVSHVEALVGHSLYTPLDMDI--------AGDPDYGLAAQRS 814
[Close]
BLAST of Protocadherin-h vs. Ensembl Zebrafish
Match: pcdh7b (protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299])

HSP 1 Score: 261.151 bits (666), Expect = 2.425e-71
Identity = 262/915 (28.63%), Postives = 421/915 (46.01%), Query Frame = 2 
Query:  437 SIIKTMNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADNQ---DGKCVKSIRLIFKNTYRKEGVDLEFE----ILDINDNRPMWPTNVVELLYPESTEKQSIKL-AIAYDKDIGENAMIKYYLQPIYHDNLN--------------------------------FNLE-----NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIY-FTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI------SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIE--GFRKLRLTVRVCDSGLPQKCSEDLMII---------------VTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKN 2962
             I+  ++   L+L +L + +      +R+ EE P    +  V+  L      +  FT+    + SE   I + TG ++  ++RIDRE L        + +C     +       +  VDL FE    ILDINDN P +P+ V+ L   E+    ++ L   A D+D G N + +Y L     DN                                  F L+     + E +  L  K  +D E +  + +T+   D G P  SS   ++V + D+NDN P+F ++V+  +  + E +S  A IL++ A D D   NG+I Y    +  + +R    LD  TG L +   +D +   +  +F V+A+D    P   +  ATV I + D ND +P I+I      F+ D        N+ E++    + +A +Q+ D D+     + C++     F+L        D+NK K + L  S   D E  Q  +V I   D+G    S N   I+ V D NDNPP F+      +  EN +   R +  V A+D D GKNAE+ Y++       +  F ID+ TG + ++  LDRE+ + Y   VIA D+G P L G+  +++LV D ND  P F    + F I E+   NS VG++   D D G+NA +S +   +              F I  ++G I      DRE + +YS  ++A++  +P + SAT + +++V+D NDN P    P+NNS   +    +I T +    ATD D   NA L+Y IV      +F++D  +G++ L  K+E   F   RL V+V DSG+P + +  L+ I               V  + ST  +A+ +   N  L K  ++ + G +   + VI +ILV+ M   +   +NKN
Sbjct:    5 GIVDYLSYCFLILQLLSQPAAKQVLRYRLAEEGPADVRVGNVAADLGITAGMDVTFTL---ESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSVIGP-AQSWVDL-FEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYEL---IQDNGESTVRRIGTSGSGSVDSHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEAD--LPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAAT-ESVRRLLRLDESTGWLSVLHRIDREDVSQ-LRFTVMARDRGQPPK--TDKATVIINIKDENDNVPNIDIRKIGRIFLKDGV-----ANVAEDV-IVDTPIALVQVSDRDKGPNGIVTCTVVGDVPFQLKPASEVEGDMNK-KKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVV-TVVALDADSGKNAEISYSL---DSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEE-----------NIFSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPR-SATATVSLSVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGGNPFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLFNSTIVEAQVAKSLSTPLNADIAGDPNYDLGKQRLSIAIGVVSGIMTVILIILVVVMA-RYCRPKNKN 881
[Close]
BLAST of Protocadherin-h vs. Ensembl Zebrafish
Match: pcdh7b (protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299])

HSP 1 Score: 261.536 bits (667), Expect = 3.210e-71
Identity = 262/915 (28.63%), Postives = 421/915 (46.01%), Query Frame = 2 
Query:  437 SIIKTMNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADNQ---DGKCVKSIRLIFKNTYRKEGVDLEFE----ILDINDNRPMWPTNVVELLYPESTEKQSIKL-AIAYDKDIGENAMIKYYLQPIYHDNLN--------------------------------FNLE-----NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIY-FTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI------SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIE--GFRKLRLTVRVCDSGLPQKCSEDLMII---------------VTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKN 2962
             I+  ++   L+L +L + +      +R+ EE P    +  V+  L      +  FT+    + SE   I + TG ++  ++RIDRE L        + +C     +       +  VDL FE    ILDINDN P +P+ V+ L   E+    ++ L   A D+D G N + +Y L     DN                                  F L+     + E +  L  K  +D E +  + +T+   D G P  SS   ++V + D+NDN P+F ++V+  +  + E +S  A IL++ A D D   NG+I Y    +  + +R    LD  TG L +   +D +   +  +F V+A+D    P   +  ATV I + D ND +P I+I      F+ D        N+ E++    + +A +Q+ D D+     + C++     F+L        D+NK K + L  S   D E  Q  +V I   D+G    S N   I+ V D NDNPP F+      +  EN +   R +  V A+D D GKNAE+ Y++       +  F ID+ TG + ++  LDRE+ + Y   VIA D+G P L G+  +++LV D ND  P F    + F I E+   NS VG++   D D G+NA +S +   +              F I  ++G I      DRE + +YS  ++A++  +P + SAT + +++V+D NDN P    P+NNS   +    +I T +    ATD D   NA L+Y IV      +F++D  +G++ L  K+E   F   RL V+V DSG+P + +  L+ I               V  + ST  +A+ +   N  L K  ++ + G +   + VI +ILV+ M   +   +NKN
Sbjct:    5 GIVDYLSYCFLILQLLSQPAAKQVLRYRLAEEGPADVRVGNVAADLGITAGMDVTFTL---ESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSVIGPA-QSWVDL-FEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYEL---IQDNGESTVRRIGTSGSGSVDSHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEAD--LPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAAT-ESVRRLLRLDESTGWLSVLHRIDREDVSQ-LRFTVMARDRGQPPK--TDKATVIINIKDENDNVPNIDIRKIGRIFLKDGV-----ANVAEDVI-VDTPIALVQVSDRDKGPNGIVTCTVVGDVPFQLKPASEVEGDMNK-KKYFLHTSAPLDYEAVQEYNVVIVAVDSGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVV-TVVALDADSGKNAEISYSL---DSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEE-----------NIFSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPR-SATATVSLSVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGGNPFKLFDMDAWTGVISLVGKLEQKHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLFNSTIVEAQVAKSLSTPLNADIAGDPNYDLGKQRLSIAIGVVSGIMTVILIILVVVMA-RYCRPKNKN 881
[Close]
BLAST of Protocadherin-h vs. Ensembl Xenopus
Match: ENSXETT00000047798.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938])

HSP 1 Score: 294.278 bits (752), Expect = 2.284e-82
Identity = 266/867 (30.68%), Postives = 408/867 (47.06%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK-IEGFRKL--RLTVRVCDSGLPQKCSEDLMI----------------IVTTTKSTFTDAENSNGD----NNSLVKTGITESNGAIIA-CLIVIFVILVMAMV 2932
            L+  I+ +     KNY  + EE P    IG  L +++  L   + +  +F ++        I +++ TG +     RIDRE LC+    + KC   + +          V + F I DINDN P++P+ V+ +  PE+T   S   +  A D D+G N +  Y L  +   N+ F L+     +I TP+ D          +D E K  + + I  ED G P  SST  ++VTV D+NDNRP F +     N  + E  +V   + ++ A D D   N +I++Y    +    +  F +D++TG + +K+PLD +     +K  V+A D +  P    S ATV I + D+ND IP I+    T ++ +  NGTV ++      P  + +A I + D D D    + C  D+   FRL    +    F+L  +   D E+ +   ++I   D+GK     S  ++I + D+NDN P F       +  EN      ++ ++ A D D G+NAEL Y +    P +   F +D  TG +     LDRE+QD Y  TVIA D G PSL     + + V D ND  P F   EY F +PE+  +   VG++  TD D G+NA +           +L   NA + F I   +G I      DRE + SY+  ++A++  +P+K S+TV  TI V D NDN P F  P NN S   + T  S G+ +A   A D D   NA+L YSI+      +F +   SG + L +K + G   +  +L ++V DSG P+       +                +V  +K T    +  +G+     N  VK  I     AIIA  + VI VI V A+V
Sbjct:   13 LIACIVFESGAQEKNYI-VREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYEL--LKGQNV-FGLD-----VIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVN--IPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREES-PYHKLTVLASDGSSTP----SRATVTINITDINDNIPSID----TRYIINPVNGTVQLS---EKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFDN--QFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNP-PGTELTKISATDADSGRNAELSYML---GPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVV-----------TLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQK-SSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIII-----AIIAGTMTVILVIFVTALV 833
[Close]
BLAST of Protocadherin-h vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938])

HSP 1 Score: 293.893 bits (751), Expect = 2.711e-82
Identity = 266/867 (30.68%), Postives = 408/867 (47.06%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK-IEGFRKL--RLTVRVCDSGLPQKCSEDLMI----------------IVTTTKSTFTDAENSNGD----NNSLVKTGITESNGAIIA-CLIVIFVILVMAMV 2932
            L+  I+ +     KNY  + EE P    IG  L +++  L   + +  +F ++        I +++ TG +     RIDRE LC+    + KC   + +          V + F I DINDN P++P+ V+ +  PE+T   S   +  A D D+G N +  Y L  +   N+ F L+     +I TP+ D          +D E K  + + I  ED G P  SST  ++VTV D+NDNRP F +     N  + E  +V   + ++ A D D   N +I++Y    +    +  F +D++TG + +K+PLD +     +K  V+A D +  P    S ATV I + D+ND IP I+    T ++ +  NGTV ++      P  + +A I + D D D    + C  D+   FRL    +    F+L  +   D E+ +   ++I   D+GK     S  ++I + D+NDN P F       +  EN      ++ ++ A D D G+NAEL Y +    P +   F +D  TG +     LDRE+QD Y  TVIA D G PSL     + + V D ND  P F   EY F +PE+  +   VG++  TD D G+NA +           +L   NA + F I   +G I      DRE + SY+  ++A++  +P+K S+TV  TI V D NDN P F  P NN S   + T  S G+ +A   A D D   NA+L YSI+      +F +   SG + L +K + G   +  +L ++V DSG P+       +                +V  +K T    +  +G+     N  VK  I     AIIA  + VI VI V A+V
Sbjct:   33 LIACIVFESGAQEKNYI-VREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYEL--LKGQNV-FGLD-----VIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVN--IPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREES-PYHKLTVLASDGSSTP----SRATVTINITDINDNIPSID----TRYIINPVNGTVQLS---EKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFDN--QFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNP-PGTELTKISATDADSGRNAELSYML---GPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVV-----------TLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQK-SSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIII-----AIIAGTMTVILVIFVTALV 853
[Close]
BLAST of Protocadherin-h vs. Ensembl Xenopus
Match: ENSXETT00000047801.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938])

HSP 1 Score: 293.893 bits (751), Expect = 3.969e-82
Identity = 266/867 (30.68%), Postives = 408/867 (47.06%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK-IEGFRKL--RLTVRVCDSGLPQKCSEDLMI----------------IVTTTKSTFTDAENSNGD----NNSLVKTGITESNGAIIA-CLIVIFVILVMAMV 2932
            L+  I+ +     KNY  + EE P    IG  L +++  L   + +  +F ++        I +++ TG +     RIDRE LC+    + KC   + +          V + F I DINDN P++P+ V+ +  PE+T   S   +  A D D+G N +  Y L  +   N+ F L+     +I TP+ D          +D E K  + + I  ED G P  SST  ++VTV D+NDNRP F +     N  + E  +V   + ++ A D D   N +I++Y    +    +  F +D++TG + +K+PLD +     +K  V+A D +  P    S ATV I + D+ND IP I+    T ++ +  NGTV ++      P  + +A I + D D D    + C  D+   FRL    +    F+L  +   D E+ +   ++I   D+GK     S  ++I + D+NDN P F       +  EN      ++ ++ A D D G+NAEL Y +    P +   F +D  TG +     LDRE+QD Y  TVIA D G PSL     + + V D ND  P F   EY F +PE+  +   VG++  TD D G+NA +           +L   NA + F I   +G I      DRE + SY+  ++A++  +P+K S+TV  TI V D NDN P F  P NN S   + T  S G+ +A   A D D   NA+L YSI+      +F +   SG + L +K + G   +  +L ++V DSG P+       +                +V  +K T    +  +G+     N  VK  I     AIIA  + VI VI V A+V
Sbjct:   33 LIACIVFESGAQEKNYI-VREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYEL--LKGQNV-FGLD-----VIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVN--IPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREES-PYHKLTVLASDGSSTP----SRATVTINITDINDNIPSID----TRYIINPVNGTVQLS---EKAPLNTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFDN--QFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNP-PGTELTKISATDADSGRNAELSYML---GPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVV-----------TLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQK-SSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGVLYKLVIKVNDSGKPEPFHTIAFVHLFVNETITNGSYIQELVRKSKETAVGEDFRDGEITPQTNDYVKIII-----AIIAGTMTVILVIFVTALV 853
[Close]
BLAST of Protocadherin-h vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 266.544 bits (680), Expect = 5.129e-73
Identity = 239/809 (29.54%), Postives = 393/809 (48.58%), Query Frame = 2 
Query:  434 LSIIKTMNAIGLLLFILIK-YSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRK--EGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYL--QPIYHDNLNFNLENSENRLILTPKFDV----DYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDY-DRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRL--ISDI--NKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLM 2779
            L++ +T  A  L LF  +     + K  +R+ EE+P    IG+     S +     K  Y+   +G P     + +  KTG +   +  IDRE+L  C + + G KC     +   +        +D + EI+DINDN P + + V+ L  PE+T    +  +  A D+D G N +  Y L   P   D   F L+ +E++    P+  V    D E +  +++TI  +D G P  +S+  ++++++D NDN P+F +  +     + E + +   +L+V A D D   N  I+Y    +    +R    LD  TG + ++ P+D  D G  + KF V+AKD    P    +  T+ I+  D ND  P I I     F    + G V  NI E++ P ++ +A +Q+ D DE   + + C +     F+L  +SD   +  K + L  + + D E+ +   + I   D+G     ++ ++ + VTD NDN P F+      V    +  N  + +V A D D G N++L Y+I+   P +   F I+  +G++ ++  LDRE+++HY+  V+AVD+G PSL GT +++I V D ND  P F    Y F + E+    S VG+V   D D G+NA I      ++            +F I+  +G I+ +   DRE + +Y+  ++A++  +P + S+ V  TI VLD NDNAP    P N S   +  +   GT +   RA D D   NAEL YSI       +F + + +G + L K I  + +   RL V+V D G P +    L+
Sbjct:   43 LAMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGS---LASDYGYPDSKHLYKLE-LGHP----YLRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDL--FGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYE--AELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVG--TLKFSVVAKDKGANPKTARTQVTITIR--DTNDNKPVIEIRG---FGLVTHQGGV-ANISEDV-PVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILP-DPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES-----------GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPR-SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALV 816
[Close]
BLAST of Protocadherin-h vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 265.774 bits (678), Expect = 1.387e-72
Identity = 239/809 (29.54%), Postives = 393/809 (48.58%), Query Frame = 2 
Query:  434 LSIIKTMNAIGLLLFILIK-YSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRK--EGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYL--QPIYHDNLNFNLENSENRLILTPKFDV----DYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDY-DRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRL--ISDI--NKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLM 2779
            L++ +T  A  L LF  +     + K  +R+ EE+P    IG+     S +     K  Y+   +G P     + +  KTG +   +  IDRE+L  C + + G KC     +   +        +D + EI+DINDN P + + V+ L  PE+T    +  +  A D+D G N +  Y L   P   D   F L+ +E++    P+  V    D E +  +++TI  +D G P  +S+  ++++++D NDN P+F +  +     + E + +   +L+V A D D   N  I+Y    +    +R    LD  TG + ++ P+D  D G  + KF V+AKD    P    +  T+ I+  D ND  P I I     F    + G V  NI E++ P ++ +A +Q+ D DE   + + C +     F+L  +SD   +  K + L  + + D E+ +   + I   D+G     ++ ++ + VTD NDN P F+      V    +  N  + +V A D D G N++L Y+I+   P +   F I+  +G++ ++  LDRE+++HY+  V+AVD+G PSL GT +++I V D ND  P F    Y F + E+    S VG+V   D D G+NA I      ++            +F I+  +G I+ +   DRE + +Y+  ++A++  +P + S+ V  TI VLD NDNAP    P N S   +  +   GT +   RA D D   NAEL YSI       +F + + +G + L K I  + +   RL V+V D G P +    L+
Sbjct:   43 LAMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGS---LASDYGYPDSKHLYKLE-LGHP----YLRVDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDL--FGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYE--AELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQAS-DTVRRLLHLDRSTGLITVQGPIDREDVG--TLKFSVVAKDKGANPKTARTQVTITIR--DTNDNKPVIEIRG---FGLVTHQGGV-ANISEDV-PVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILP-DPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPES-----------GEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPR-SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALV 816
[Close]
BLAST of Protocadherin-h vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692])

HSP 1 Score: 278.485 bits (711), Expect = 3.828e-77
Identity = 233/787 (29.61%), Postives = 379/787 (48.16%), Query Frame = 2 
Query:  494 SQTMKNYFRITEEEPIGTDLFEVSK-FLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRKEGVDL---EFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKIE----GFRKLRLTVRVCDSGLPQKCSEDLM 2779
            S T +  +++ EE+P  T +  ++  +    +   Y+  V G P     + +  KTG +   +  IDRE L  C +   G  C+    +   +  +     L   + E+ DINDN P + + V+ L  PE+T   S+  + +A D+D G N +  Y LQ        F L+ +E++    P+     ++D E    +++TI  +D G P  +S+  ++VTV+D NDN P+F +  +     + E + +   +++V A D D   N  I+Y      P+ +R    LD +TG + ++ P+D +    + +F V+AKD    P   S+ A V + V D+ND  P I I      +    +G    NI E++  +++ +A +Q+ D DE + + + C +     F+L     +  +  K + L  +   D E  +   + I   D+G     ++ ++ + V D NDN P F            +     + +V A D D G NAEL Y++   +P +   F I    G++ +   LDRE++D Y + V+A D+G PSL GT  +L+ V D ND  P F    Y F + E+    S VG+V   D D G+NAR+           S+ + N    F I+  +G I+ +   DRE + +Y+  ++A++  V PR  SA V  TI VLD NDNAP  TAP N S   +  +  +G  ++   A D D   NAELTYSI    +PY +F +   SG + L K+IE    G    RL V+V D G P +    L+
Sbjct:   33 SHTTQVVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEV-GAP----YLRVDGKTGDIFTTETSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYE--AELSENSPIGHSVIQVKANDSDQGANAEIDYTFH-QAPEVVRRLLRLDRNTGLITVQGPVDRED-LSTLRFSVLAKDRGATPK--SARAQVVVTVKDMNDNAPTIEIRGIG--LVTHQDGMA--NISEDVA-EETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSL-EPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQ---------LSVEQDNG--DFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPR--SAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIA-GGNPYGLFQIGSHSGAITLEKEIERRHHGLH--RLVVKVSDRGKPPRYGTALV 786
[Close]
BLAST of Protocadherin-h vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692])

HSP 1 Score: 278.485 bits (711), Expect = 3.828e-77
Identity = 233/787 (29.61%), Postives = 379/787 (48.16%), Query Frame = 2 
Query:  494 SQTMKNYFRITEEEPIGTDLFEVSK-FLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRKEGVDL---EFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKIE----GFRKLRLTVRVCDSGLPQKCSEDLM 2779
            S T +  +++ EE+P  T +  ++  +    +   Y+  V G P     + +  KTG +   +  IDRE L  C +   G  C+    +   +  +     L   + E+ DINDN P + + V+ L  PE+T   S+  + +A D+D G N +  Y LQ        F L+ +E++    P+     ++D E    +++TI  +D G P  +S+  ++VTV+D NDN P+F +  +     + E + +   +++V A D D   N  I+Y      P+ +R    LD +TG + ++ P+D +    + +F V+AKD    P   S+ A V + V D+ND  P I I      +    +G    NI E++  +++ +A +Q+ D DE + + + C +     F+L     +  +  K + L  +   D E  +   + I   D+G     ++ ++ + V D NDN P F            +     + +V A D D G NAEL Y++   +P +   F I    G++ +   LDRE++D Y + V+A D+G PSL GT  +L+ V D ND  P F    Y F + E+    S VG+V   D D G+NAR+           S+ + N    F I+  +G I+ +   DRE + +Y+  ++A++  V PR  SA V  TI VLD NDNAP  TAP N S   +  +  +G  ++   A D D   NAELTYSI    +PY +F +   SG + L K+IE    G    RL V+V D G P +    L+
Sbjct:   33 SHTTQVVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEV-GAP----YLRVDGKTGDIFTTETSIDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYE--AELSENSPIGHSVIQVKANDSDQGANAEIDYTFH-QAPEVVRRLLRLDRNTGLITVQGPVDRED-LSTLRFSVLAKDRGATPK--SARAQVVVTVKDMNDNAPTIEIRGIG--LVTHQDGMA--NISEDVA-EETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSL-EPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQ---------LSVEQDNG--DFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPR--SAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIA-GGNPYGLFQIGSHSGAITLEKEIERRHHGLH--RLVVKVSDRGKPPRYGTALV 786
[Close]
BLAST of Protocadherin-h vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849])

HSP 1 Score: 274.633 bits (701), Expect = 6.739e-76
Identity = 241/788 (30.58%), Postives = 377/788 (47.84%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVS-KFLRDK-IKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
            LL  ++ +     KNY  + EE P    IG  L +++   + DK + +  +F ++        I I++ TG +     RIDRE LCA    D +C   + +          V + F I DINDN P++PT V+ +  PE++   S   L  A D DIG N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P FI+       ++ E   + + + ++ A D D  +N RI++Y    +    +  F L++ TG + +K+PLD +    S+K +V+A D    P    + ATV + V D+ND +P I+I +    + +  NGTV ++  EN  P  + +A I + D D +    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  ++I V D+NDN P F   F + +V EN S     + ++ A D D G+NAE+ Y +    P     F +D  TG +     LDRE+Q+ Y  TV+A D G P L     + + V D ND  P+F   EY F +PE    +  VG++  TD D G+N+ ++   L           +  ++F I   SG I      DRE + SY+  ++A +     + S+T   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAE+ YSIV      +F ++ TSG + L +K  +      R+ V+  D G P
Sbjct:   13 LLACVVFQSGAQEKNY-TVREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIE--VSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREES-PSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRY----IVNPTNGTVLLS--ENA-PLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSN--QFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS-PGAQLTKISATDADSGQNAEISYMLGFDAP---PEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSIL-----------DVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSR-SSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQP 759
[Close]
BLAST of Protocadherin-h vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849])

HSP 1 Score: 275.789 bits (704), Expect = 9.044e-76
Identity = 241/788 (30.58%), Postives = 377/788 (47.84%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVS-KFLRDK-IKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
            LL  ++ +     KNY  + EE P    IG  L +++   + DK + +  +F ++        I I++ TG +     RIDRE LCA    D +C   + +          V + F I DINDN P++PT V+ +  PE++   S   L  A D DIG N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P FI+       ++ E   + + + ++ A D D  +N RI++Y    +    +  F L++ TG + +K+PLD +    S+K +V+A D    P    + ATV + V D+ND +P I+I +    + +  NGTV ++  EN  P  + +A I + D D +    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  ++I V D+NDN P F   F + +V EN S     + ++ A D D G+NAE+ Y +    P     F +D  TG +     LDRE+Q+ Y  TV+A D G P L     + + V D ND  P+F   EY F +PE    +  VG++  TD D G+N+ ++   L           +  ++F I   SG I      DRE + SY+  ++A +     + S+T   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAE+ YSIV      +F ++ TSG + L +K  +      R+ V+  D G P
Sbjct:   13 LLACVVFQSGAQEKNY-TVREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIE--VSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREES-PSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRY----IVNPTNGTVLLS--ENA-PLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSN--QFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS-PGAQLTKISATDADSGQNAEISYMLGFDAP---PEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSIL-----------DVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSR-SSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQP 759
[Close]
BLAST of Protocadherin-h vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849])

HSP 1 Score: 275.789 bits (704), Expect = 2.703e-75
Identity = 241/788 (30.58%), Postives = 377/788 (47.84%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVS-KFLRDK-IKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
            LL  ++ +     KNY  + EE P    IG  L +++   + DK + +  +F ++        I I++ TG +     RIDRE LCA    D +C   + +          V + F I DINDN P++PT V+ +  PE++   S   L  A D DIG N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P FI+       ++ E   + + + ++ A D D  +N RI++Y    +    +  F L++ TG + +K+PLD +    S+K +V+A D    P    + ATV + V D+ND +P I+I +    + +  NGTV ++  EN  P  + +A I + D D +    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  ++I V D+NDN P F   F + +V EN S     + ++ A D D G+NAE+ Y +    P     F +D  TG +     LDRE+Q+ Y  TV+A D G P L     + + V D ND  P+F   EY F +PE    +  VG++  TD D G+N+ ++   L           +  ++F I   SG I      DRE + SY+  ++A +     + S+T   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAE+ YSIV      +F ++ TSG + L +K  +      R+ V+  D G P
Sbjct:   13 LLACVVFQSGAQEKNY-TVREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIE--VSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREES-PSHKLLVLATDGGSTP----ARATVLVNVTDINDNVPSIDIRY----IVNPTNGTVLLS--ENA-PLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSN--QFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS-PGAQLTKISATDADSGQNAEISYMLGFDAP---PEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSIL-----------DVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSR-SSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGLHRVIVKANDLGQP 759
[Close]
BLAST of Protocadherin-h vs. UniProt/SwissProt
Match: sp|Q6KEQ9|PC11X_PIG (Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN=PCDH11X PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.860e-78
Identity = 243/794 (30.60%), Postives = 383/794 (48.24%), Query Frame = 2 
Query:  434 LSIIKTMNAIGLLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVS-KFLRDK-IKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYL---QPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINI-YFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKL---RLTVRVCDSGLP 2755
            + ++   +   +LL  ++  S   +  + I EE P    IG  L +++   + D+ + +  +F ++        I I++ TG +     RIDRE LCA    D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L    D D G N +  Y+L   Q I+  ++    E  +   ++  K ++D E K  + + I  ED G P  SST  ++V+V D NDNRP F +N      ++ E   V + + ++ A D D  +N +I++Y    +    +  F L+S TG + +K+PLD +    ++K +V+A D    P    + A V + V D+ND IP I+I Y   P      NGTV ++  EN  P  + +A I + D D D   ++ C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  ++I V D+NDN P F   F + +V EN S   + + ++ A+D D G+NAE+ Y +    P   + F +D  TG +     LDRE+Q+ Y+ TV+A D G P L     +L+ V D ND  PVF   EY F +PE+   +  VG++  TD D G+N+ +    L           +A + F I   +G I      DRE + SY+  ++A +     + S+T   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAEL YS+V      +F +D TSG + L +K   F  L   RL V+  D G P
Sbjct:    1 MDLLSGTHIFAVLLACIVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDRSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPDTGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQLIVQK-ELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIE--VSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEPLDREES-PNHKLLVLASDGGLTP----ARAMVLVNVTDINDNIPSIDIRYIINPI-----NGTVVLS--ENA-PLNTKIALITVTDKDADHNGWVSCFTDHEVPFRLRPVFSN--QFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQ-LTKISAMDADSGRNAEINYLLGFDAP---SEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGENSAVILSIL-----------DANDDFTIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRISR-SSTAKVTINVVDVNDNKPVFVVPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGLFIIDQTSGNITLKEKCV-FADLGLHRLVVKAKDLGQP 759
[Close]
BLAST of Protocadherin-h vs. UniProt/SwissProt
Match: sp|Q08174|PCDH1_HUMAN (Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 4.318e-74
Identity = 230/783 (29.37%), Postives = 374/783 (47.77%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSEC----ISIQDKTG-MTKIKKRIDRETL--CADNQDG-KCVKSIRLIFKNTYRKEGVDL---EFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKIE----GFRKLRLTVRVCDSGLPQKCSEDLM 2779
            +++ EE+P  T        L   + ++Y F  +G     E     + +  KTG +   +  IDRE L  C +   G  C+    +   +  +     L   + E+ DINDN P + + V+ L  PE+T   S+  + +A D+D G N +  Y LQ        F L+ +E++    P+     ++D E    +++TI  +D G P  +S+  ++VTV+D NDN P+F +  +     + E + +   +++V A D D   N  I Y      P+ +R    LD +TG + ++ P+D +    + +F V+AKD    P   S+ A V + V D+ND  P I I      +    +G    NI E++  +++ +A +Q+ D DE + + + C +     F+L     +  +  K + L  +   D E  +   + I   D+G     ++ ++ + V D NDN P F            +     I ++ A D D G NAEL Y++   +P +   F I   TG++ +   LDRE+++ Y + V+A D+G PSL GT  +L+ V D ND  P F    Y F + E+    S VG+V   D D G+NA++           S+ + N    F I+  +G I+ +   DRE + +Y+  ++A++  V PR  SA V  TI VLD NDNAP  TAP N S   +  +  +G  ++   A D D   NAEL YSI    +PY +F +   SG + L K+IE    G    RL V+V D G P +    L+
Sbjct:   62 YKVPEEQPPNT--------LIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYE--AELSENSPIGHSVIQVKANDSDQGANAEIEYTFH-QAPEVVRRLLRLDRNTGLITVQGPVDRED-LSTLRFSVLAKDRGTNPK--SARAQVVVTVKDMNDNAPTIEIRGIG--LVTHQDGMA--NISEDVA-EETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSL-EPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQ---------LSVEQDNG--DFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPR--SAYVGVTINVLDENDNAPYITAPSNTSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIA-GGNPYGLFQIGSHSGAITLEKEIERRHHGLH--RLVVKVSDRGKPPRYGTALV 808
[Close]
BLAST of Protocadherin-h vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 8.560e-70
Identity = 233/790 (29.49%), Postives = 369/790 (46.71%), Query Frame = 2 
Query:  464 GLLLFILIKYSQTMKNYFRITEEEP----IGTDLFE---VSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
             +LL  ++ +S   +  + I EE P    IG DL +   +S      + +  +F ++        I I++ TG +     RIDRE LCA   +D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L  A D D+G N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P F +       ++ E   V   + ++ A D D  +N +I++     +    R  F L++ TG + +K+PLD +    ++K +V+A D    P    + A V + V DVND +P I+I +    + +  N TV ++  EN+ P  + +A I + D D D    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  + I V D+NDN P F   F   ++ EN S     + +V A D D G NAE+ Y +    P +   F +D  TG + +   LDRE++D Y  T++A D G P LT    + + + D ND  PVF   EY F +PE+   +  VG++  TD D G N+ ++   L +            + F I   +G I      DRE + SY+  ++A +     + S++   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAE+ YSIV      +F +D  +G + L +K  +      R+ V+  D G P
Sbjct:   11 AVLLACVVFHSGAQEKNYTIREEMPENVLIG-DLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYEL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIE--VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREET-PNHKLLVLASDGGLMP----ARAMVLVNVTDVNDNVPSIDIRY----IVNPVNDTVVLS--ENI-PLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSN--QFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS-PGIQLTKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEN-----------DDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR-SSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759
[Close]
BLAST of Protocadherin-h vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 8.946e-70
Identity = 233/790 (29.49%), Postives = 369/790 (46.71%), Query Frame = 2 
Query:  464 GLLLFILIKYSQTMKNYFRITEEEP----IGTDLFE---VSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
             +LL  ++ +S   +  + I EE P    IG DL +   +S      + +  +F ++        I I++ TG +     RIDRE LCA   +D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L  A D D+G N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P F +       ++ E   V   + ++ A D D  +N +I++     +    R  F L++ TG + +K+PLD +    ++K +V+A D    P    + A V + V DVND +P I+I +    + +  N TV ++  EN+ P  + +A I + D D D    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  + I V D+NDN P F   F   ++ EN S     + +V A D D G NAE+ Y +    P +   F +D  TG + +   LDRE++D Y  T++A D G P LT    + + + D ND  PVF   EY F +PE+   +  VG++  TD D G N+ ++   L +            + F I   +G I      DRE + SY+  ++A +     + S++   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAE+ YSIV      +F +D  +G + L +K  +      R+ V+  D G P
Sbjct:   11 AVLLACVVFHSGAQEKNYTIREEMPENVLIG-DLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYEL--IKSQNI-FGLD-----VIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIE--VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREET-PNHKLLVLASDGGLMP----ARAMVLVNVTDVNDNVPSIDIRY----IVNPVNDTVVLS--ENI-PLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSN--QFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS-PGIQLTKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEN-----------DDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR-SSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759
[Close]
BLAST of Protocadherin-h vs. UniProt/SwissProt
Match: sp|Q6X862|PC11X_GORGO (Protocadherin-11 X-linked OS=Gorilla gorilla gorilla OX=9595 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 1.534e-69
Identity = 233/790 (29.49%), Postives = 369/790 (46.71%), Query Frame = 2 
Query:  464 GLLLFILIKYSQTMKNYFRITEEEP----IGTDLFE---VSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD-NQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLP 2755
             +LL  ++ +S   +  + I EE P    IG DL +   +S      + +  +F ++        I I++ TG +     RIDRE LCA   +D  C   + +          V + F I DINDN P++P  V+ +  PE++   S   L  A D D+G N +  Y L  I   N+ F L+     +I TP+ D          +D E K  + + +  ED G P  SST  ++V+V D NDN P F +       ++ E   V   + ++ A D D  +N +I++     +    R  F L++ TG + +K+PLD +    ++K +V+A D    P    + A V + V DVND +P I+I +    + +  N TV ++  EN+ P  + +A I + D D D    + C  D++  FRL    +    F+L  +   D E+ +   +++   D GK     S  + I V D+NDN P F   F   ++ EN S     + +V A D D G NAE+ Y +    P +   F +D  TG + +   LDRE++D Y  T++A D G P LT    + + + D ND  PVF   EY F +PE+   +  VG++  TD D G N+ ++   L +            + F I   +G I      DRE + SY+  ++A +     + S++   TI V+D NDN P F  P +N S   +    + GT +    A D D   NAE+ YSIV      +F +D  +G + L +K  +      R+ V+  D G P
Sbjct:   11 AVLLACVVFHSGAQEKNYTIREEMPENVLIG-DLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYEL--IKSQNM-FGLD-----VIETPEGDKMPQLIVQKELDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIE--VSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREET-PNHKLLVLASDGGLMP----ARAMVLVNVTDVNDNVPSIDIRY----IVNPVNDTVVLS--ENI-PLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSN--QFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNS-PGIQLTKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDEN-----------DDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSR-SSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759
[Close]
BLAST of Protocadherin-h vs. TrEMBL
Match: A0A158R906 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6448 PE=4 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 4.397e-91
Identity = 271/975 (27.79%), Postives = 432/975 (44.31%), Query Frame = 2 
Query:  485 IKYSQTMKNYFRITEEEPIGTDLFEVSKFL------RDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGK--------CVKSIRLIFKN--------TYRKEGVDLEFEILDINDNRPMWP------TNVVELLYPESTEKQSIKLAI------AYDKDIGENAMIKYYLQPIY----------HDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQA---------------------VYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFT-----TPFVSDRYNGTVHINIPENMNPQQ----------SD--LAHIQIEDADEDDKSFIDCSLDNKESFRLISD-------------------------------INKVKSFILSASKS-------FDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK--FNFNVNEN---TSYRNRDIGQVEAIDKDLGKNAELRY-------TIINVQPRSDAR--FRIDSFTGKMYIDAPLDRE---EQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNA-RISYH---------------------------------FLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN----------------VVNPRK-------FSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYV--------FNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 2800
            I +     + F + EE P+G+ +  V+ +L      R ++ +   F ++G    ++   I +K+G  +   RIDRE LC    D +        C+K + ++ K+        +  +E + L   ILDINDN P WP         VE   P +T  +   +A       A D D G N  + Y L+              DN  F   +  + L L P   +D E   F+N+T+ A D G P  SS++ + V + D+ND+ P F  + + P+                       + ET  + +++L++ A D+D+  N RI Y I PS   F++  F LD  +G L +K+ LDYD G + + F V+A D AP PY L+ +A V+I++ D NDE P I I            S   NG +   +P     Q+           D  +A++Q+ D DE+ +  ++C L  +++F L +D                               + KV S    +++         DRE   ++ + I C D   N     I +++ D NDNPP+F +   FNF++ EN      +   +G+V+A+D DLG+NA + Y       T ++ Q  S  +  FR+   TG +Y    LDRE   E   Y+  V+A+D G+P  LTGT  + ++V D+ND PP F    Y F++PED  +   VGVV+A DRD    A  I+YH                                 F+    P  +        F I   SGEI +  KLDRE+   ++  + AI+                  + R+       F+AT +  +T+ D NDNAP+F  P  + L+ +   +++G +I   +A DAD  +NA ++YSI R+  P          F +D TSG++FL +  +G    RL +  CD G+  KC+    I +  ++
Sbjct:   22 ISFPSPFASTFDVVEESPLGSTITGVADYLKRIVLLRVEMPNSTTFQLMGTDALTKNFVINEKSGELRTLGRIDREALCGSEVDPRNDLAIDSNCLKPLNILIKSLGISGASGSSMREKIMLR--ILDINDNAPRWPGKRLLAVKFVEAFQPLATYGKQEMIAQCQLLDRAIDPDSGPNGTVSYTLKGTGADMFRLEYADQDNGGFEHPDVSSPLRLKPVVPLDREVFEFYNLTLFAYDSGNPQRSSSIPLHVYITDVNDHFPVF--HSYTPSHVSAYPRESKQGELVKYVPERGHLMETARIGSVVLQLNATDEDAGDNARITYSIFPSDVAFVQPYFALDPISGYLTVKQRLDYDSGPRRFTFKVLAVDGAPEPYRLTGTALVDIELTDYNDEPPNIEILIAQNGNLNSISSISMNGGITPMLPPGSKHQELVAYIDESPSPDIVIAYVQVSDKDENGEDQVECHLGPRDNFTLQADSTPSSGKMDHFGFETASLSERPNRRISEYRVLAKVPSGGDQSTREASSLQDRLDRETTPSQLLTIICEDRNGNHAEVRIRLHLLDINDNPPQFLNDSYFNFSLAENREPVGNQQVWLGRVQAVDPDLGENARILYHLAPDQNTHLDGQFGSSPQQLFRVQPDTGDIYAQVSLDRENAPENGVYSFNVLAIDNGKPRQLTGTARVDVIVLDVNDWPPEFTRDIYTFEVPEDLELREVVGVVEAVDRDATAGANSITYHLNPPRAGLVQRSLKNDTMERRKRDYMLQQQQPLFMPHLEPSKVRDERPLSYFSIDSRSGEIRVIRKLDRESNGYFTFEVLAIDSPLAGSSAQSMSPSQPSQSTRRGFKGGEVFTATATVVVTLTDVNDNAPEFRYPNTSILLHMAPGETLGHKILTVQAVDADYGENARISYSI-RSEIPIPQDGPGTGNFAIDETSGLIFLTRPTQGPVNHRLVIEACDHGVQPKCTSSPAIQIAVSE 991
[Close]
BLAST of Protocadherin-h vs. TrEMBL
Match: A0A068Y517 (Protocadherin 9 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000715500 PE=4 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 8.278e-89
Identity = 274/977 (28.05%), Postives = 423/977 (43.30%), Query Frame = 2 
Query:  485 IKYSQTMKNYFRITEEEPIGTDLFEVSKFL------RDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGK--------CVKSIRLIFKN--TYRKEGVDLE----FEILDINDNRPMWP------TNVVELLYPEST------EKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENR----------LILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNV-----FHPNQA--------------VYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFT-----TPFVSDRYNGTVHINIPENMNPQQ----------SD--LAHIQIEDADEDDKSFIDCSLDNKESFRLISD-------------------------------INKVKSF-------ILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK--FNFNVNEN---TSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDAR------------FRIDSFTGKMYIDAPLDRE---EQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNA-RISYH------------------------------------FLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVV---------------NPRK--------FSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYV--------FNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 2800
            I +     + F + EE P  + +  V+ +L      R ++ +   F ++G    ++   I +K+G      RIDRETLC+   D +        C+K + ++ K+       G ++       ILDINDN P WP         VE     ST        QS  L  A D D G N  + Y L+    D       + EN           L L P   +D E   F+N+T+ A D G P  S+++ + V + D+ND+ P F   V      +P ++              + ET  + +++L++ A D+D+  N RI Y I PS   F++  F LD  TG L +K+ LDYD G + + F V+A D AP PY L+ +A V+I++ D NDE P I I            +   NG +   IP     Q+           D  +A++Q+ D DE+ +  ++C L  +++F L +D                               + KV S          S     DRE   ++ + I C D   N     I +++ D NDNPP+F +   FNF++ EN      +   +G+V+A+D DLG+NA + Y   ++ P   A             FR+   TG +Y    LDRE   E   Y+  V+A+D G+P  LTGT  + + V D+ND PP F    Y F++PED  +   VGVV+A DRD    A  I+YH                                    F+    P  +        F I   +GEI +  KLDRE+   ++  I AI+ +                P +        F+AT +  +T+ D NDNAP+F  P  + L+ +   +++G +I   +A DAD  +NA ++YSI R+  P          F +D TSG++FL + I+G    RL +  CD G   KC+    I +  ++
Sbjct:   20 IAFPSPFASTFDVVEESPPRSMIPGVADYLKRIVLLRVEMPNSTTFQLMGTDALTKSFVINEKSGELHTMGRIDRETLCSSEVDPRSDLATDSNCLKPLNVLIKSLGIGGASGSNVREKIMLRILDINDNAPRWPGKRLLTVRFVEAFQSLSTYGKQEMTAQSQLLDRAIDPDSGPNGTVSYSLKGTGADMFRLEYADHENGRFVHPDVSSPLRLKPVVPLDREIFEFYNLTLFAYDSGNPQRSNSIPLHVYITDVNDHVPVFHSYVPGHVSAYPRESKQGELVKYLPERGHLMETARIGSVVLQLNATDEDAGDNARIIYSIFPSDATFVQTYFALDPITGYLTVKQRLDYDSGPRRFTFKVLAVDGAPEPYRLTGTALVDIELTDYNDEPPNIEILIAQNGNLNSISNVNMNGGITPMIPPGSKHQELVAYIEESPSPDIVIAYVQVSDKDENGEDQVECHLGARDNFTLQADSSSSSGKMDHFGFETASLNERASRRISEYRVLAKVPSGGDQSTGETSSLQDRLDRETTPSQLLTIICEDRNGNHAEIRIRLHLLDINDNPPRFLNDSYFNFSLAENREPVGNQQVWLGRVQAVDPDLGENARISY---HLAPDQSAHLDDQFGSSPQQLFRVQPDTGDIYAQVSLDRENAPENGVYSFNVLAMDHGKPQQLTGTARVDVTVLDVNDWPPEFTRDIYTFEVPEDLELREVVGVVEAVDRDATAGANSITYHLNPPRAGLVQRSLKNETVERRKRDSMMQQQQQQQPLFMPHLEPSKVRDERPLSYFSIDSRTGEIRVIRKLDRESNGYFTFEILAIDSLLAGSSAQSILPSQPSQPTRRGFKGGEVFTATATVVVTLTDVNDNAPEFRYPNTSILLHMAPGETLGHKILTVQAVDADYGENARISYSI-RSEIPIPQDGPGTGNFAIDETSGLIFLTRPIQGPVNHRLVIEACDHGGQPKCASSPAIQIAVSE 992
[Close]
BLAST of Protocadherin-h vs. TrEMBL
Match: A0A158RDU3 (Uncharacterized protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS6077 PE=4 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.821e-86
Identity = 276/1019 (27.09%), Postives = 437/1019 (42.89%), Query Frame = 2 
Query:  485 IKYSQTMKNYFRITEEEPIGTDLFEVSKFL------RDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGK--------CVKSIRLIFK--------NTYRKEGVDLEFEILDINDNRPMWP------TNVVELLYPESTE------KQSIKLAIAYDKDIGENAMIKYYLQPI--------YHDNLNFNLENSE--NRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNV-----FHPNQA--------------VYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSY----------------------------------------KFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNP---------------QQSDL-----AHIQIEDADEDDKSFIDCSLDNKESFRLISDI----NKVKSF-------------------ILSASKS---------------FDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK--FNFNVNEN---TSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDAR------------FRIDSFTGKMYIDAPLDRE---EQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNA-RISYH---------------------------------FLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-----------------------VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYV--------FNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 2800
            I +     + F + EE P G+ +  V+ +L      R ++ +   F ++G    ++   I +K+G  +   RIDRE LC+   D +        C+K + ++ K         +  +E + L   ILDINDN P WP         VE   P +T        QS  L  A D D G N  + Y L+          Y D      E+S+  + L + P   +D E   F+N+T+ A D G P LSS++ + V + D+ND+ P F   V      +P ++              + ET  + +++L++ A D+D+  N RI Y I PS   F++  F LD  +G L +K+ LDYD G + +                                        +F V+A D AP PY L+ +A V+I++ D NDE P I I       +   NG   IN+   + P               ++S L     A++Q+ D DE+ +  ++C L  +++F L +D      KV  F                   +L+   S                DRE   ++ + I C D   N     I +++ D NDNPP+F +   FNF++ EN      +   +G+V+A+D DLG+NA + Y   ++ P  +A             FR+   TG +Y    LDRE   E   Y+  V+A+D G+P  LTGT  + ++V D+ND PP F    Y F++PED  +   VGVV+A DRD    A  I+YH                                 F+    P  +        F I   +GEI +  KLDRE+   ++  + AI+                         +   F+AT +  +T+ D NDNAP+F  P  + L+ +   +++G +I   +A+DAD  +NA ++YSI R+  P          F +D TSG++FL + I+G    RL +  CD G+  KC+    I +  ++
Sbjct:   23 IAFPSPFASTFDVVEESPPGSMISGVADYLKRIVLLRVEMPNSTTFQLMGTDTLTKSFVINEKSGDLRTLGRIDREILCSSEVDPRNDLATDSNCLKPLNVLIKSHGIGGASGSSMREKIMLR--ILDINDNAPRWPGKRLLTVKFVEAFQPLATYGKQEMIAQSQLLDRAIDPDCGPNGTVSYNLKGTGADMFRLEYADQDGGRFEHSDVSSPLRIKPVVPLDREVFEFYNLTLFAYDSGNPQLSSSIPLHVYITDVNDHAPVFHSYVPGHVASYPRESKQGELVKYVPERGHLMETARIGSVVLQLNATDEDTGDNARITYSIFPSDVTFVQPYFALDPISGYLTVKQRLDYDSGPRRFTFKVRTLFSYLFTKVDHVIRVDVFQQVLCGLGAAGAFCLNRFQVLAVDGAPEPYRLTGTALVDIELTDYNDEPPNIEILIAQ---NGNVNGISSINMNGGITPIVPPGSKHQELVAYIEESPLPDIVIAYVQVSDKDENGEDQVECHLGPRDNFTLQADSSSSGGKVDHFGFETTSLSERPSKRISEYRVLAKVPSGSDQSTRETSSLQDRLDRETTPSQLLTIICEDRNGNHAEIRIRLHLLDINDNPPRFLNDSYFNFSLAENREPVGNQQVWLGRVQAVDPDLGENARISY---HLAPDRNAHLDGQFGSSPQQLFRVQPDTGDIYAQVSLDRENAPENGIYSFNVLAMDHGKPRQLTGTARVDVIVLDVNDWPPEFTRDIYTFEVPEDLELREVVGVVEAVDRDATAGANSITYHLNPPRAGLVQRSLKNETTERRKRDSMLQQQQPLFMPHLEPSKVKDERPLSYFSIDSRTGEIRVIRKLDRESNGYFTFEVLAIDSSLAGSSSQAIPSSQSSQLTRRGFKSGEVFTATATVVVTLTDVNDNAPEFRYPNTSILLHMAPGETLGHKILTVQASDADYGENARISYSI-RSEIPIPQDGPGTGNFAIDETSGLIFLTRPIQGPVNHRLVIEACDHGVQPKCTSSPAIQIAVSE 1032
[Close]
BLAST of Protocadherin-h vs. TrEMBL
Match: K1QH30 (Protocadherin-11 X-linked OS=Crassostrea gigas OX=29159 GN=CGI_10022471 PE=4 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.512e-85
Identity = 265/817 (32.44%), Postives = 401/817 (49.08%), Query Frame = 2 
Query:  593 EYRFTVIG-DPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNL-----ENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQINI-YFTTPFVSDRYN-GTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDN-KESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAP-INNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGF--RKLRLTVRVCDSG-LPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRL 2983
            ++ F  +G D + S+   I + TG  + K ++DRE LC   +   CV  +R+   +      +++   I D NDN P++P N   L  PE     S   L+ A DKD+GEN  +K Y+     D     L     E  E  L+LT K  +D E  R + + +VA+D G P  SST+ + V V DINDN+P+F  + +  N  + E  +V   I+KV+A D D  QNG + Y    +     +  F ++++TGE+K+ + L +  G + ++ +V A D   PA   LSS A + I V DVN+  P+INI   +   VS+  N GTV              +A++ + D D      + C + + K    ++S+      + +  S   DRE      V++ C D+G  K   SK+ I+ V D NDN PKF    +N  + EN +   + I +V A D D   NAE+ Y I   +P   ++F +DS TG +      DRE++      V A D G P  LT T  + + +ED ND  P F    Y FQ+ E+ + +  VG V ATD+DIG NA I Y       P+S         F I   +GEI    +LDRE KPSY++ + A +  V+P+  S TV  T+TVLD ND  P    P   N  I +       + +    A D DE +N  L YSIV+  D  +F +D  +G ++L +KIE F  ++  L + V D G +P K   ++ + V    +  T AE   G N   V   IT      IAC   + ++L +A+++  FLI+  +   ++RL
Sbjct:   60 KFSFLSVGSDSDNSDLFQINENTGDLETKSKLDREALCPFQK--LCVLPLRIGANSGTFFRTINVNISISDRNDNSPLFPMNSTSLSIPEDANINSTFPLSSALDKDMGENNSLKTYVLEPPSDTFGLLLGRKIDETLEVNLVLTQK--LDREKVRSYRVYLVAKDGGLPQRSSTMTINVAVQDINDNKPRFSYSQY--NVTIQEDITVGTTIMKVSASDDDDGQNGVVEYQFSSTPNGESQKLFSINNNTGEVKVIQQLTFTSG-EPHRIVVSAIDHGFPA---LSSQAFINIHVVDVNNHAPEININLLSGGKVSESSNKGTV--------------IAYVAVVDRDTGKNGQVKCKIIHPKFQLHVLSNT----EYKVVVSDELDREENIEYIVKVYCEDDGIPKQNKSKSFIVQVLDTNDNEPKFDRDLYNATITENKA-PGQMITKVTASDSDQENNAEVHYAI---EPNFRSKFEVDSSTGIIRAKVEFDREQESSITFKVYAADNGTPVPLTATATVKLNIEDDNDEFPTFNKSSYNFQVMENKNADFVVGTVLATDKDIGSNAAIVY-----TLPFSYQNA----PFSINPSTGEIKTNRRLDREAKPSYTLSVMATDRGVSPKNSSCTV--TVTVLDENDEYPHIRFPNRGNESIKVPHTTLPNSIVTQVEAYDKDEGENGTLRYSIVKRDDDNLFYIDAKTGQIYLFRKIESFDIKEFSLFIDVSDQGAVPLKTGVEVRLFV-EYHAIPTVAEQKIGQN---VLIAIT------IAC---VTIVLSLAILVTIFLIKRVDNNKRKRL 820
[Close]
BLAST of Protocadherin-h vs. TrEMBL
Match: A0A0S1VVS0 (Protocadherin-h OS=Lethenteron camtschaticum OX=980415 GN=Pcdh-h PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 3.787e-84
Identity = 245/781 (31.37%), Postives = 382/781 (48.91%), Query Frame = 2 
Query:  515 FRITEEEP----IGT-----DLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCAD--NQDGKCVKSIRLI-FKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLN-FNLE-----NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIY-FTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDI-NKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQ----VEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEK-SIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQ 2758
            +R+ EE P    IG      +L  +   L  KI S+Y     G P     + +++ TG +     RIDRE LC D  +++  C   ++++   N Y +  + ++  + DINDN P +P+ V+ L   E+    +   L  A D D G N + +Y L     D  N F LE     + E    L  +  +D E K  + + + AED G P  SST  ++VTV D+NDN P F Q+       + E T +   ++++ A D D   N  + Y     +    R  F LD+ TG + ++ PLD +     Y+ IV+A D  P P  + ++ATV + VADVND  P + ++   +P      +G +H+       P  + +A I++ D D +    + C ++    F+L     N    F+L  S   D E +    VR+   D G  +  ++  +++ + D+NDNPP F    N  V E T+Y N   G     + A D+D GKNA++ Y +    P +   FR++  TG + +  PLDREE++ Y  +VIA D G PS+ G   ++I V D ND PP F   E+ F + E+      VGV+  TD D GKNA +++  + ++           + F I   +G I      DRE KPSY+  ++A++   P K S     TI ++D NDNAP    P +N+   + T   S GT +A   ATD D  +NAEL+YS+V      +F +D  +G + L +K+    +G    RL VRV D+G P+
Sbjct:   33 YRVFEELPANKLIGNLARDLNLRSLGPGLTYKIVSKYE----GSP----LVRVRNDTGELFTTATRIDREQLCPDVADEEAGCYHEVQVVVLPNQYFRL-IKVKILVEDINDNAPSFPSPVINLTIAENMPVGTRFSLQAAGDPDAGLNGIQRYALT----DTGNAFTLEVIEGADGEKSPQLLIRGSLDRERKEVYEMKLKAEDGGDPPRSSTAILRVTVTDVNDNHPVFEQSQIE--VKIPENTPIGTPVIQLRATDADLGLNAEVTYSYSGRVSSPARRLFQLDNLTGVITVRGPLDRED-TALYRLIVLATDRGPNP--VPATATVTVSVADVNDNAPSVAVHDIISPV-----DGVIHLT---EAAPPNTPIALIEVSDPDLEQNGRVTCRIEGDVPFQLKPAYQNHENQFLLETSALLDFETKNEYSVRLVATDLGSPRMSSTATVVVRLRDENDNPPVF----NPGVVEATAYENNAPGAQIVTLAAGDRDSGKNAQMHYYL---GPDAPPAFRLNPSTGVLSVAEPLDREERNLYRFSVIARDNGAPSMHGNATVVIRVLDQNDNPPKFNNKEFNFFLSENLPRFGTVGVISVTDADEGKNALVTFSLVGNS-----------DIFTINPVTGMIQSNISFDREQKPSYTFQVQAVDAGEPPKTS-FAKVTIHIMDINDNAPTVLLPPSNASYRLVTPSTSPGTSVAEVMATDIDSGENAELSYSVVGGNPFNLFAIDQATGNITLTQKLLPAHQGLH--RLVVRVNDAGFPE 766
[Close]
BLAST of Protocadherin-h vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 282.722 bits (722), Expect = 7.659e-78
Identity = 261/868 (30.07%), Postives = 410/868 (47.24%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IG---TDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADN-QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN---SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQKCSEDLMIIV----TTTKSTF----------TDAENSNGDNNSLVKT-GITESNGAIIA-CLIVIFVILVMAMV 2932
            L+L  L+      +  + + EE+P    IG   TDL +++     K+ S  +F  +        + ++  TG +     RIDRE LC+    + +C   I +          V + F I DINDN P++ + V+ +  PE+T       +  A+D D+G N +  Y L  +    L F L+     +I TP+ D          +D ETK  F + I  ED G P  SST  ++VTV D+NDNRP F  +    N  V E   +   + ++ A D D   N +I++     +    +  F +DS TG + +K+PLD +  +  +K IV+A D +  P    S ATV + V DVND +P I+    T ++ +  NGTV ++  EN  P  + +A I + D D D    + C  D+   FRL    N    F+L  +   D E  +   ++I   D+GK     S  ++I + D+NDN P F   +   ++ EN     + I ++ A D D G NA + Y++    P +   F ID  +G + +   LDRE+Q+ Y+ TVIA D G   L     + ++V+D ND  P F   EY F +PE+  +   VG++  TD D G NA ++   +           N  + F I   +G I      DRE + SY+ +++A++     + ++    TI V+D NDN P F  P +N    L+   T    G+ +    A D D   NAEL YSI+  +   +F +D T+G + L +KI    +G    RL V+V D G P+      ++ +    T + +TF          T  + + GD++ L +T G      AIIA  + VI VI V A+V
Sbjct:   12 LILTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDL-DLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYEL--VKVGALEFGLD-----IIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRE-SNPVHKLIVLASDGSATP----SRATVIVNVTDVNDNVPSID----TRYIMNPVNGTVLLS--ENA-PLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFND--QFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLI-KITATDADSGSNALIIYSL---GPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSII-----------NGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVD-SGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNP--GSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLH--RLVVKVKDLGQPESLHSIALVHLFVNDTVSNATFLQEQVRKSMETPLDKNVGDSDILPQTNGYVIVVIAIIAGTMTVILVIFVTALV 835
[Close]
BLAST of Protocadherin-h vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 280.411 bits (716), Expect = 1.268e-77
Identity = 260/868 (29.95%), Postives = 409/868 (47.12%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IG---TDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADN-QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN---SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQKCSEDLMIIV----TTTKSTF----------TDAENSNGDNNSLVKT-GITESNGAIIA-CLIVIFVILVMAMV 2932
            L+L  L+      +  + + EE+P    IG   TDL +++     K+ S  +F  +        + ++  TG +     RIDRE LC+    + +C   I +          V + F I DINDN P++ + V+ +  PE+T       +  A+D D+G N +  Y L     +   F L+     +I TP+ D          +D ETK  F + I  ED G P  SST  ++VTV D+NDNRP F  +    N  V E   +   + ++ A D D   N +I++     +    +  F +DS TG + +K+PLD +  +  +K IV+A D +  P    S ATV + V DVND +P I+    T ++ +  NGTV ++  EN  P  + +A I + D D D    + C  D+   FRL    N    F+L  +   D E  +   ++I   D+GK     S  ++I + D+NDN P F   +   ++ EN     + I ++ A D D G NA + Y++    P +   F ID  +G + +   LDRE+Q+ Y+ TVIA D G   L     + ++V+D ND  P F   EY F +PE+  +   VG++  TD D G NA ++   +           N  + F I   +G I      DRE + SY+ +++A++     + ++    TI V+D NDN P F  P +N    L+   T    G+ +    A D D   NAEL YSI+  +   +F +D T+G + L +KI    +G    RL V+V D G P+      ++ +    T + +TF          T  + + GD++ L +T G      AIIA  + VI VI V A+V
Sbjct:   52 LILTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDL-DLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSVSE---FGLD-----IIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRE-SNPVHKLIVLASDGSATP----SRATVIVNVTDVNDNVPSID----TRYIMNPVNGTVLLS--ENA-PLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFND--QFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLI-KITATDADSGSNALIIYSL---GPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSII-----------NGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVD-SGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNP--GSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLH--RLVVKVKDLGQPESLHSIALVHLFVNDTVSNATFLQEQVRKSMETPLDKNVGDSDILPQTNGYVIVVIAIIAGTMTVILVIFVTALV 874
[Close]
BLAST of Protocadherin-h vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 279.256 bits (713), Expect = 1.234e-76
Identity = 260/868 (29.95%), Postives = 409/868 (47.12%), Query Frame = 2 
Query:  467 LLLFILIKYSQTMKNYFRITEEEP----IG---TDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADN-QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN---SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSGLPQKCSEDLMIIV----TTTKSTF----------TDAENSNGDNNSLVKT-GITESNGAIIA-CLIVIFVILVMAMV 2932
            L+L  L+      +  + + EE+P    IG   TDL +++     K+ S  +F  +        + ++  TG +     RIDRE LC+    + +C   I +          V + F I DINDN P++ + V+ +  PE+T       +  A+D D+G N +  Y L     +   F L+     +I TP+ D          +D ETK  F + I  ED G P  SST  ++VTV D+NDNRP F  +    N  V E   +   + ++ A D D   N +I++     +    +  F +DS TG + +K+PLD +  +  +K IV+A D +  P    S ATV + V DVND +P I+    T ++ +  NGTV ++  EN  P  + +A I + D D D    + C  D+   FRL    N    F+L  +   D E  +   ++I   D+GK     S  ++I + D+NDN P F   +   ++ EN     + I ++ A D D G NA + Y++    P +   F ID  +G + +   LDRE+Q+ Y+ TVIA D G   L     + ++V+D ND  P F   EY F +PE+  +   VG++  TD D G NA ++   +           N  + F I   +G I      DRE + SY+ +++A++     + ++    TI V+D NDN P F  P +N    L+   T    G+ +    A D D   NAEL YSI+  +   +F +D T+G + L +KI    +G    RL V+V D G P+      ++ +    T + +TF          T  + + GD++ L +T G      AIIA  + VI VI V A+V
Sbjct:   52 LILTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDL-DLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSVSE---FGLD-----IIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRE-SNPVHKLIVLASDGSATP----SRATVIVNVTDVNDNVPSID----TRYIMNPVNGTVLLS--ENA-PLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFND--QFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLI-KITATDADSGSNALIIYSL---GPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSII-----------NGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVD-SGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNP--GSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLH--RLVVKVKDLGQPESLHSIALVHLFVNDTVSNATFLQEQVRKSMETPLDKNVGDSDILPQTNGYVIVVIAIIAGTMTVILVIFVTALV 874
[Close]
BLAST of Protocadherin-h vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 267.314 bits (682), Expect = 1.328e-73
Identity = 246/823 (29.89%), Postives = 391/823 (47.51%), Query Frame = 2 
Query:  407 FNFNFFEIFLSIIKTMN-AIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVS--KFLRDKIKSEYRFTVIGDPNFSECISIQDKTG---MTKIKKRIDRETLCADNQDGK-CVKSIRLIFKNTYRKEG---VDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYI----DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVN-ENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRK----LRLTVRVCDSGLPQKCSEDLMII 2785
            F+  +F +F  ++ ++N A+G +L+              + EE+P  T +  ++  + L D     Y+  V G P     + +  KTG    T+I   IDRETL      GK C     +   +  + +    ++   E+ DINDN P +P+ V+ L   E+     +  +  A D+D   N ++KY L      +  F+L+ + +R    P+     ++D E K  +++TI A D G P   S+  ++V + D NDN PQF ++ +     V E + V   +L+V A D D   NG I Y I    DP +P+ ++    ++  TG + +K PLD +    S+KF VIA+D  P+P   SS+  V I+V D ND  P + I      +  R +     NI E+M P  + +A +Q+ D DE + + + C +     F+L     S ++  K + L  +   D E  +   V I   D+G     ++ ++ + VTD NDN P F+    F V     +     +  V A+D D G NAEL Y+II     +   F ID  +G++   +PLDRE ++ Y   V A D+G PS  GT  ++I V D ND  P F    Y F + E+    S VG+V   D D G+NA++      D              F ++  +G I+ +   DRE + SY+  ++A++   P + S+ V  TI VLD NDNAP  T P N+S   +    +  + + +  A D D   NAEL YSI       +F +  + G + L K++   RK     RL V+V D G P + +  L+ I
Sbjct:    3 FSVGWFLLFALLVDSINSALGGILY-------------HVREEQPPNTLIGSLAADQGLPDS-GHLYKLEV-GAP----YLRVDGKTGEIFTTEIP--IDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYE--AEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDP-VPKMLQ----IERSTGIISVKGPLDREE-ISSFKFHVIARDKGPSPK--SSTTYVSIEVTDQNDNAPAVEIRG----IGLRTHSDGVANISEDM-PVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPL-FEVEFAEENQPGEKVLDVIALDADSGTNAELVYSII-ADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPD-----------VGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPR-SSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELT--RKHGGLHRLVVKVSDRGKPSRHAIALVHI 773

HSP 2 Score: 137.502 bits (345), Expect = 2.496e-32
Identity = 172/617 (27.88%), Postives = 263/617 (42.63%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKF---LRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCA------DNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPES-----TEKQSIKLAIAY----DKDIGENAMI--------KYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYI--DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKS-YKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD--IGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILV-EDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARIS 2269
            ++E  P+G  + +V      L    + EY      DP   + + I+  TG+  +K  +DRE + +          G   KS       TY      +  E+ D NDN P      + L          +E   +  A+A     DKD GENA++         + L+P    +++     ++ +  L     +DYE  R + + IVA D G P LSST +++V V D NDN P F   +F    A  E       +L V A+D DS  N  + Y I  D S     R  F +D  +GE++ + PLD  R HK  Y+F V A D     +    +ATV I+V D ND  P+        F+   Y+     ++ ENM P  S +  + + D D+ + + +  S++      ++ +       ILS S SFDRE + +   R+   D G+   S    + INV D+NDN P      N +    +     D  +  VEA D D G NAEL Y+I    P     F I    G++ +   L R+    + + V   D+G+PS      + I V E I+++  V   V +    P D  +        A D D G  A+ S
Sbjct:  252 VSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDP-VPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKS-----STTY------VSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVD-----NKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFA--EENQPGEKVLDVIALDADSGTNAELVYSIIADSST----RGLFEIDPSSGEVRARSPLD--REHKERYEFRVTAADKGVPSHR--GTATVVIKVLDRNDNDPK--------FMLSSYS----FSVLENM-PPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGT---ILS-SISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHE--LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNVSLVEGLVGHSLYTPLDTDI--------AGDPDYGLAAQRS 814
[Close]
BLAST of Protocadherin-h vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 268.085 bits (684), Expect = 4.611e-73
Identity = 250/825 (30.30%), Postives = 392/825 (47.52%), Query Frame = 2 
Query:  407 FNFNFFEIFLSIIKTMN-AIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVS--KFLRDKIKSEYRFTVIGDPNFSECISIQDKTG---MTKIKKRIDRETLCADNQDGK-C-----VKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYI----DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVN-ENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRK----LRLTVRVCDSGLPQKCSEDLMII 2785
            F+  +F +F  ++ ++N A+G +L+              + EE+P  T +  ++  + L D     Y+  V G P     + +  KTG    T+I   IDRETL      GK C     V    LI   + R   ++   E+ DINDN P +P+ V+ L   E+     +  +  A D+D   N ++KY L      +  F+L+ + +R    P+     ++D E K  +++TI A D G P   S+  ++V + D NDN PQF ++ +     V E + V   +L+V A D D   NG I Y I    DP +P+ ++    ++  TG + +K PLD +    S+KF VIA+D  P+P   SS+  V I+V D ND  P + I      +  R +     NI E+M P  + +A +Q+ D DE + + + C +     F+L     S ++  K + L  +   D E  +   V I   D+G     ++ ++ + VTD NDN P F+    F V     +     +  V A+D D G NAEL Y+II     +   F ID  +G++   +PLDRE ++ Y   V A D+G PS  GT  ++I V D ND  P F    Y F + E+    S VG+V   D D G+NA++      D              F ++  +G I+ +   DRE + SY+  ++A++   P + S+ V  TI VLD NDNAP  T P N+S   +    +  + + +  A D D   NAEL YSI       +F +  + G + L K++   RK     RL V+V D G P + +  L+ I
Sbjct:   39 FSVGWFLLFALLVDSINSALGGILY-------------HVREEQPPNTLIGSLAADQGLPDS-GHLYKLEV-GAP----YLRVDGKTGEIFTTEIP--IDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRL--IEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYE--AEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDP-VPKMLQ----IERSTGIISVKGPLDREE-ISSFKFHVIARDKGPSPK--SSTTYVSIEVTDQNDNAPAVEIRG----IGLRTHSDGVANISEDM-PVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPL-FEVEFAEENQPGEKVLDVIALDADSGTNAELVYSII-ADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPD-----------VGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPR-SSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELT--RKHGGLHRLVVKVSDRGKPSRHAIALVHI 809

HSP 2 Score: 137.502 bits (345), Expect = 3.159e-32
Identity = 172/617 (27.88%), Postives = 263/617 (42.63%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKF---LRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCA------DNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPES-----TEKQSIKLAIAY----DKDIGENAMI--------KYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYI--DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKS-YKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD--IGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILV-EDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARIS 2269
            ++E  P+G  + +V      L    + EY      DP   + + I+  TG+  +K  +DRE + +          G   KS       TY      +  E+ D NDN P      + L          +E   +  A+A     DKD GENA++         + L+P    +++     ++ +  L     +DYE  R + + IVA D G P LSST +++V V D NDN P F   +F    A  E       +L V A+D DS  N  + Y I  D S     R  F +D  +GE++ + PLD  R HK  Y+F V A D     +    +ATV I+V D ND  P+        F+   Y+     ++ ENM P  S +  + + D D+ + + +  S++      ++ +       ILS S SFDRE + +   R+   D G+   S    + INV D+NDN P      N +    +     D  +  VEA D D G NAEL Y+I    P     F I    G++ +   L R+    + + V   D+G+PS      + I V E I+++  V   V +    P D  +        A D D G  A+ S
Sbjct:  288 VSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDP-VPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKS-----STTY------VSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVD-----NKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFA--EENQPGEKVLDVIALDADSGTNAELVYSIIADSST----RGLFEIDPSSGEVRARSPLD--REHKERYEFRVTAADKGVPSHR--GTATVVIKVLDRNDNDPK--------FMLSSYS----FSVLENM-PPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGT---ILS-SISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHE--LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNVSLVEGLVGHSLYTPLDTDI--------AGDPDYGLAAQRS 850
[Close]
BLAST of Protocadherin-h vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 217.238 bits (552), Expect = 2.546e-58
Identity = 205/762 (26.90%), Postives = 330/762 (43.31%), Query Frame = 2 
Query:  629 SECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEG--------VDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN---FNLENSE-----------------NRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQF-IRDQFFLDSDTGELKLKKPLDYDR-GHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAH----KFNFNVNENTSYRNRDIGQVE----AIDKDLGKNAELRYTIINVQPRSDAR--FRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVE------YRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAP-INNSLISIDTEKSIGTEIAL-FRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSG 2749
            S CI + + +G   +  R+DRE LC +  D           +     +G        +D++  + DIND+ P +    + +   ES    + + L  A D D G N++  Y +     D L    F+L  S+                 +R +L  +  +D E    + + +  ED G P LS ++ + + V+D NDN P F+     P + + E + V   ++++ A D D+  NG I Y     +     +    +D  TG + ++     DR     ++ +V+A+D        S+S TV +++ D ND  P     F    +   Y     + I EN+ P  + +  I + D D      +D  L+      L S  NKV+ F+L  ++  D E  Q  +V +   D G  + SK  N+II+V D NDN P F +    + +  V E +   N   G V     A D D G N  + +T+  +         F ++  TG++ +  PLDRE++  Y ++V A D G P       + + V D ND  P F  V       Y+F + E+ SV + VG V  +D D G NAR++ + + +A P  +               G +     LDRE +  Y + + A++   P   SA+   +ITV D NDNAP  T+P  N++   + T    G  + +   A D D   N    Y I+      +F L+  SG L LA+ +    EG    RL VRV D G
Sbjct:   72 SLCI-VNELSGELSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVR-ITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQ--LSRSASVTVTVELNDDNDNAP----VFEVIALQGEYLPDGGVKIVENL-PSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASP-NKVQ-FLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAG-------DTPGGVVRTLVVLDREDRVQYELSVRAVDSGRP-ALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLH--RLVVRVRDRG 812

HSP 2 Score: 124.405 bits (311), Expect = 5.825e-29
Identity = 152/609 (24.96%), Postives = 253/609 (41.54%), Query Frame = 2 
Query: 1097 LNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDT--------------------GELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKE---SFRLISDINKVKSFI-LSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINV--TDKNDNPPKF---------AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTI---INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVF--------ETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNP-RKFSATVSATITVLDCNDNAPKFTAPINNSL-----ISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDP-YVFNLDYTSGILFLAKKI---EGFRKLRLTVRVCDSGLP 2755
            L+V++ V DIND+ P F     H N ++ E+ +V   +    AID D+  N   +Y I  +    ++   F   ++                      L+L++ LD +    SY+ ++  +D      +LS S  + I V D ND  P   ++   P        T  + I E+     S +  ++  D D      I  S   K    + +    ++     + +  ++  DRE      + +  RD G+   S ++ + V   D NDN P F                + EN       +  +   D DLG +  +   +      +  S  + +    T ++     LD EE   YN++V+A D+G P L+   N++I V DIND  PVF        +   Y   + E+    + V  + ATD D G N  I++     A   S+      E F +   +G++ + + LDRE +  Y + +EA +  +P RK  A V   +TVLD NDNAP F   ++NS        ++ E S+GT +     +D DE  NA +  ++VR   P ++     T G +     +   E   +  L+VR  DSG P
Sbjct:  128 LDVQLLVRDINDHAPAF--RAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDRE-AVPSYELLLWGEDGGNP--KLSGSVLLTIVVVDANDNAP---VFVDPP--------TRPVRITEHSKVGTS-VVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLP-SGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTRL-----LDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVA-----ELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVR--VTVLDENDNAPTFVG-VSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRP 705

HSP 3 Score: 110.923 bits (276), Expect = 8.717e-25
Identity = 135/562 (24.02%), Postives = 239/562 (42.53%), Query Frame = 2 
Query:  518 RITEEEPIGTDLFEVSKFLRDKIKS---EYRF-TVIGDPNFSECISIQDKTGMTKIK--KRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLY-PESTEK--------QSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNV-FHPNQAVYETTSVE-----AIILKVTAIDKDSEQNGRINYYI-DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKN--IIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD--------IG-QVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQG 2089
            RITE   +GT + ++     D   +    Y F T +        + +   TG+  ++  +++DRET     L    +DG  +           R   V +  E+ D NDN P++    ++  Y P+   K          + L    D D+G +  +   L+  +         N    L+ T +  +DYE  + +N++++A DRG P LS  LN+ ++V+DINDN P F+       + AVYE +  E      ++L + A D DS  NG I + + + +  + + + F L+  TG+L L  PLD ++  + Y+  V A D   +P +  + A V + V D ND  P      T   VS+  N      + E  +   + +  +   D DE D + +  +L  +     I         ++      DRE++    + +   D+G+   S +  + I V+D NDN P          N N ++++          +G  V A D D G N    Y II   P+    F +++ +G + +   +   ++  + + V   D+G
Sbjct:  281 RITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLS----------RSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLE--FPTGAELASPNKVQFLLKTTRL-LDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMR-YELSVEACDGG-SP-QRKARAIVRVTVLDENDNAP------TFVGVSNSTNCMYQFFVEEETS-VGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSP-----NTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPK--GIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812
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BLAST of Protocadherin-h vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 207.994 bits (528), Expect = 4.452e-55
Identity = 198/743 (26.65%), Postives = 332/743 (44.68%), Query Frame = 2 
Query:  638 ISIQDKTG-MTKIKKRIDRETLCADNQDG-KCVKSIRL----IFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE-STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN-FNLE-----NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFI-----RDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAP------------APYELSSSATVEIQ--VADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSI-GTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSG-ILFLAKKIEGFRKL-RLTVRVCDSGL 2752
            + +  +TG +    +++DRE LC     G +C   +++    +    + K  +++   + DINDN P +   V+ +  PE +   +   +  A D D   N + +Y L P     ++ F L      N E    L  +  +D E ++ + + + A D G P  S +  +++ V D NDN P F Q     N  + E + V   ++++ A D+D+  N  + Y +  S          +  F LD ++G + +   L+ +     Y+ I++A D  P                  +S T+EI+  VA VN  I          ++S+      H+N+P         +A I + D D      + C + N E    +  +     ++L   ++ D E +    V+I   D G    S+  ++ I + D NDN P F    +  +V EN     + +  V A D+D+ KNAE+ Y +    P +   F +D  TG + +   LDRE++ +Y+ T++A DQG P L G   +++ V D+ND  P F   E+ F + E+   +S VG+V   D D G+N R+    L          T+  + F I  +SG I      DRE +  Y + ++A +   P + S+TV   I V+D NDN+P    P +N+       +++ GT +    A D D   NAEL Y IV      +F++D   G I  +    E    L RL VRV D G+
Sbjct:   86 VRVNPRTGELFAAGRKMDREALCGGQDPGDECHVDVQVGVLPVQPGPFFKL-IEVRINVEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPDSEANGVRRYELLPSDPATVSAFELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEV--NVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREES-PVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVI----------YISE----ASHVNLP---------VALITVSDPDIGANGAVTCYIYNPEVPFQLKKLTYPNQYLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVI-GKHLITVSATDRDMDKNAEMVYFL---GPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSILG---------TDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVR-SSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLPGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGI 787
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BLAST of Protocadherin-h vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 209.534 bits (532), Expect = 9.251e-55
Identity = 193/714 (27.03%), Postives = 323/714 (45.24%), Query Frame = 2 
Query:  635 CISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTP------KFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQN--VFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDR-----GHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL-DNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQV----EAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRE-TKPSYSIIIEAINVVNP--RKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIE 2704
              SI+   G       IDRE         +    +R++  +        +   + D+N++ P++     E+   E     S   ++ A DKD G+N  +KY +             N   +  + P      ++++D ET+  +++T+ A D G   LSS++ V VTV+D+NDN+P F  +  VFH      E   V +++  V A D D+  NG + Y  +   PQ     F LDS+TG +   +  D +      G  S+ F V+A D    P  L   ATV++ V DVND  PQ        F    Y  +V  +   N+    + L  +   D DE     +  ++ +  E  +   D +  +  +L    S DRE   +  + ++  D+G +    S  + + V D+NDNPP+F      +V+   S R   +G++     A D+D G + ++RY I  V   + A F ID  TG +++   LD E Q  Y + V A D G P  +    +++ V D ND PP F   +    I E+  + ++V  V A D D   N  + Y  ++  FP   H       F I  +SGEI   +++DRE T   + + + A +   P   + SA  + T+ V D NDNAP+F  P   +++      + G+ +   +A+D DE +NA + Y++       +F LD  +GI+  + +++
Sbjct:  703 SFSIEWSGGRIFTANAIDREE--------QAFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEI----------GEGNGGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFH----FCEEQEVGSLVGAVQATDADAGSNGGVTYSFE--KPQV---NFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGG-RPKPLQDRATVQVFVQDVNDNPPQ--------FAKSVYQASVSESA-SNL----TQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLG---SLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESL-LSVDALESTR---VGELLITLTASDEDTGPSGDVRYAI--VAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYS-IARQFPPGAH-------FTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTP--TAILVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELD 1356

HSP 2 Score: 184.496 bits (467), Expect = 4.059e-47
Identity = 206/786 (26.21%), Postives = 337/786 (42.88%), Query Frame = 2 
Query:  527 EEEPIGTDLFEVSKFLRDK-IKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRET-------LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWP-TNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN--FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQ---AVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADED-DKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG-KNENSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFT-GKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEK----FQIKKDSGEIMITSKLDRET------KPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSG---LPQKCSEDLMII 2785
            E  P G+ + +V+    D  + ++ R++++   +     S+ + TG+     ++DRE        + A +Q  +         K  Y      L   +LD+ND  P++  T  V      S     +    A D D+GEN  ++Y   P         F L++   ++  T    +D E    + + + A+DRG P L ST  V V V D+NDN P     VF+P Q   ++ E       +  VTA D D   NG + Y +          +F +++ TG +  +  LD +     Y+  V A D         S A V I VAD  D  P         F  D Y+  V     EN+ P  + +  +     D + + +++  S D + SF     I      I +A+ + DRE Q    +R+     G   E S +++++  D N++ P F    +  ++ E+    +R    V A DKD GKN E++Y I   +     +F I  F  G++Y+   LDRE ++ Y++TV A+D G   L+ +  + + V D+ND  P+F +  Y F   E+  V S VG VQATD D G N  ++Y               +FEK    F++  ++G I      DRE         S+S  + A +   P+      +  + V D NDN P+F   +  +  S+    S  T++    A+D DE  N  L Y+I    +   F +D ++G + L   +  E      L V   DSG   L   C+  + ++
Sbjct:  352 EGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLG-WFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQP--------KTAY----TSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKV--TTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHP-----VFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAA----RFQVNAVTGAVSTRVSLDREE-RAVYQLQVTALDGGH--LRARSPAIVTITVADAQDTPPT--------FARDDYSFVVF----ENVAPG-TLVGSVSASTLDLNANVTYLIVSGDQRGSF----SIEWSGGRIFTAN-AIDREEQAFYQLRVVANSGGVAGEASVSVLVH--DVNNHAPVFDRASYEVSIAEDEPVNSR-FFSVRATDKDSGKNGEVKYEI--GEGNGGEKFGI--FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTY---------------SFEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQA--SVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVL 1068

HSP 3 Score: 171.014 bits (432), Expect = 5.468e-43
Identity = 154/595 (25.88%), Postives = 262/595 (44.03%), Query Frame = 2 
Query:  782 LEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFH---PNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSM-PQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL---DNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK-----NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIIN-------VQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF 2506
            +E  + D+NDN P++    +EL   E+T +  +   + A D D G+NA++ Y +  +      F ++ +    +L     +D E +  + +T+ A D      ++   + V V D NDN P+F ++ +       A  +  +  A+I  V A D DS   G + Y + PS    +    F L   TG L + +PLD +     Y     A D       L+++A + + V D ND  P +             N ++   +PE+  P  S L  I   D DE   + ++ S+   D +  F + +D        LS +++ DRE Q   ++ +   D  ++  ++      + + +TD NDN P F    +    E++      +  V+A+D D G+N+ + Y +                 F +++ TG++ +   LDRE +  Y +TV+AVD+G P LT T  + + V D ND  P F   EY   I ED    ++V  + A D D G N  + Y   S          +    F++    G + +   LDRE   SY + + A +   P + S T S  +T+ D ND +P F
Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSV--LSGSEGAFVVDAASG--VLRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRES-RACYVLRARATDGG----GLAATARLYVNVLDANDNAPSVQ------------NDSLAAEVPEDAPPGTS-LLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQ------LSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPV-GAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASG---------DPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPAR-SDTASVRVTLSDVNDCSPAF 2054

HSP 4 Score: 163.696 bits (413), Expect = 9.238e-41
Identity = 154/591 (26.06%), Postives = 248/591 (41.96%), Query Frame = 2 
Query:  794 ILDINDNRPMWP-TNVVELLYPE-STEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLI------------LTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADE---DDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGK---NENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF 2506
            + D+NDN P +P   V+E+ + E +   + + L  A D+D+G N         + H        N E RL+            L     +D E    + + + AED G P     L V VTV D NDN P F +  +    +V E + V A +       +D    GR    +              D  TG +  ++PLD++   + Y   + A D    P  LS  AT  IQ+ DVND  P I   +  P            ++ E+  P  +  A + + DAD    + +  +     N+    ++         +L  +   DRE     ++ I   DNGK      + ++++ V D ND+ P+FA           +     +  V A+D D G NA+LRY+I++        F +D  TG +  D  +DRE      + + A DQG    T   ++ + + D+ND PP+F   +Y     E++     V  V A D D+G+N  + Y+F  D  P         E F++   +G++     LDRE    Y ++++A +  +P    +T   T+ V D NDN P F
Sbjct:   13 VGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNG--------VNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYR--ASVAEDSPVGAAL-------RDLLHRGRGPLAVP------------FDPKTGMVSTRQPLDFE-ARRQYTLSLRAADGGNPP--LSGRATAVIQLLDVNDNDPAIRFVYLPPAAR-------SASVDESAAP-GTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGN--DLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPD-MPAQYR-----EMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSP-PLGSTAKVTVVVGDLNDNHPVF 554

HSP 5 Score: 160.999 bits (406), Expect = 6.237e-40
Identity = 183/673 (27.19%), Postives = 295/673 (43.83%), Query Frame = 2 
Query:  794 ILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQA----VYETTSVEAIILKVTAIDKDSE-QNGRINYYIDPSMPQFIRDQFFLDSDTGE----LKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVT--DKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDAR----FRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLS-DAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI----EGFRKLRLTVRVCDSG 2749
            + D NDN P +             EK + + ++A D  +G  A ++  L   +       +       +++ +  +D+E +R + +++ A D G P LS      + ++D+NDN P  I+ V+ P  A    V E+ +   +   VT  D DS   NG ++  I   +    R  F L +        LK+   LD +R    Y   ++A D+   P   S++A++ + V DVND  P             R+  + +        P  S +  +   DAD    + +  S+ +       S +++    + +  K  DRE   +  + I+ +D G    +    + VT  D ND PP F   K+     EN S     +  V A D DLG+N  +RY   N  P   A+    FR+DS TGK+     LDREE + Y + V A D+G P L  T  + ++V D+ND  PVF  V+Y   I E+    + V  V ATD D G N  + Y   + DA            +FQ+   +G +     LDRE +  Y + + A++  + R  S  +  TITV D  D  P F A  + S +  +   + GT +    A+  D N N  +TY IV       F+++++ G +F A  I    + F +LR+   V +SG
Sbjct:  126 VQDANDNPPAF-------------EKPAYRASVAEDSPVG--AALRDLL---HRGRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPA-IRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSI---VGGNERGHFVLHAPGVPGLRVLKVASQLDRER-IPMYNLTILASDNG-KPVARSATASLVVYVNDVNDHAP-------------RFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFS-VDESTGLVTTDGK-VDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVEN-SLPGLFVVSVSAADSDLGENGTVRY---NFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDA-----------ARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAI-VTITVADAQDTPPTF-ARDDYSFVVFEN-VAPGTLVGSVSASTLDLNAN--VTYLIVSGDQRGSFSIEWSGGRIFTANAIDREEQAFYQLRV---VANSG 736

HSP 6 Score: 140.198 bits (352), Expect = 1.657e-33
Identity = 126/476 (26.47%), Postives = 214/476 (44.96%), Query Frame = 2 
Query: 1424 LSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFA-HKFNFNVNENTSYRNRD----IGQVEAIDKDLGKNAELRYTIINVQPR--SDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVN--PRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATD-----------PYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            +SS   VEI V DVND  P     F  P         + + + EN   +   +  +   DAD+   + +  S+ +      + D     S +L AS+  DRE + +  + +   D G +     + + V D NDN P+F+ H ++F+V E+ +   +     IG V A D D G   E+ Y +   +    +D  F +   TG + +  PLDRE +  Y +   A D G   L  T  + + V D ND  P  +      ++PEDA   + +  + ATD D G NA +          +S+   +   +F +  D G++ +   LDRE +  Y++++   +     P + S+ V  ++ + D NDNAP FT+P  ++L   D+   +G  +A  +A D D  +N+ + Y++  ATD           P  F L+  +G + L +++  E  +   LTV   D G P   S   + +
Sbjct: 1496 MSSFNQVEISVEDVNDNPP----VFAVP--------EMELEVEENTG-EGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVD---AASGVLRASRRLDREERASYLLTVRASD-GTHATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGG--GLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELE---------FSISSGDPEGRFAVGND-GQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSP-RSALAPEDS--PVGAVVATVQAVDPDSGRNSYVEYAL--ATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAV 1937

HSP 7 Score: 101.293 bits (251), Expect = 1.282e-21
Identity = 123/488 (25.20%), Postives = 194/488 (39.75%), Query Frame = 2 
Query: 1529 GTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLD--------NKESFRLISD-----------INKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVT--DKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDIND---------MPPVFETVEYRFQIPEDASVNSKVGVVQATDRD------------IGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGL-PQKCSEDLMI----------IVTTTKSTFTDAENS 2827
            G V+ N P    P   ++A    EDA    +  +D ++D        N  +++++S            + K     L+ +   DRE   +  + +   D G       + +NVT  D NDNPP F         E  +YR        ++ +D    A LR  +   + R       D  TG +    PLD E +  Y +++ A D G P L+G    +I + D+ND         +PP   +      + E A+  +   +V  TD D            +G N R   HF+       LH        ++ K      + S+LDRE  P Y++ I A +   P   SAT S  + V D ND+AP+F    +    ++      G+ +    A DAD   NA+L YSIV   D   F++D ++G++    K+  E    + L +   D G  P+     L +          + T TK   T  ENS
Sbjct:   14 GDVNDNAPSFPEPGVMEVAFK--EDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAF---------EKPAYR-------ASVAEDSPVGAALRDLLH--RGRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSA----SVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNER--GHFV-------LH-APGVPGLRVLK------VASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFAL--SAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENS 459

HSP 8 Score: 92.4337 bits (228), Expect = 5.147e-19
Identity = 97/352 (27.56%), Postives = 144/352 (40.91%), Query Frame = 2 
Query: 1796 IIINVTDKNDNPPKFAHKFNFNVN-ENTSYRNRDIGQVEAIDKDLGKNA--ELRYTIIN-------VQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPK----FTAPINNSLISIDTEKSIGTEIALFRATDADE-NKNAELTYSIVRATD--PYVFNLDYTSG--ILFLAKKIEGFR--KLRLTVRVCDSGLPQKCSEDLMIIV 2788
            + + V D NDN P F       V  +  +   R +    A+D+D+G N      Y I++       V PR   +    +F   +    PLDRE    Y + V A D G P   G   + + V+D ND PP FE   YR  + ED+ V + +       RD+                  LHR            +G +     LD E +  Y++ + A +  NP   S   +A I +LD NDN P     +  P   S  S+D   + GT  AL   TDAD    N EL+ SIV   +   +V +     G  +L +A +++  R     LT+   D+G P   S    ++V
Sbjct:    9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTK---RAFL-HLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL-------RDL------------------LHRGRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNP-PLSGRATAVIQLLDVNDNDPAIRFVYLPPAARS-ASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVV 329

HSP 9 Score: 76.6406 bits (187), Expect = 3.665e-14
Identity = 61/230 (26.52%), Postives = 103/230 (44.78%), Query Frame = 2 
Query: 2093 PSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTE---KSIGTEIALFRATDADENKNAELTYSIVRATDP----YVFNLDYTSGILFLAKKIEGFRKLR----LTVRVCDSG 2749
            P ++    + I VED+ND PPVF   E   ++ E+      +  + ATD D G+NA ++Y  LS           +   F +   SG +  + +LDRE + SY + + A +  +    +     ++ V D NDN+P+F+    +  ++ D     K+    I    A DAD     E+TY++  + D       F L   +G L + + ++  R+ R    L  R  D G
Sbjct: 1494 PPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLS----------GSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDGTH----ATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLD--RESRACYVLRARATDGG 1707
[Close]
BLAST of Protocadherin-h vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009557.1 (pep scaffold:Pmarinus_7.0:GL476748:59426:101420:1 gene:ENSPMAG00000008644.1 transcript:ENSPMAT00000009557.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 186.422 bits (472), Expect = 9.552e-48
Identity = 193/723 (26.69%), Postives = 316/723 (43.71%), Query Frame = 2 
Query:  623 NFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEIL------DINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIY-------HDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPV-LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSE-QNGRINYYID-----------PSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKF---IVIAKDSAPAPYELSSSATVEIQVADVNDEIPQ-----INIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFID-----------CSLDNKESFRLISDINKV-KSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQ------VEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV 2632
            N  +   +  +TG  K+ K +D ET          V+S R   K T+R++ VD+  ++L      D+NDNRP++ ++V E +  E+       + + A D+D G N  + Y L            D  + + E+   R  L P   +D E +    + +VA D G P  LS+T +V+V V D ND  P+F++  +  +  V E ++   ++  V A D D+   NG++ YY+            P   + +  +    + + EL    P        + +F   + I     P    L ++A V ++V+D ND  PQ     + +       S        +   +  +   ++L++  I+  +E  K FID           C +   +   +  DI  V   + L   +  DRE +    + +T  D G   +   + + V D NDN P       + V         D+        V A D D+G NA ++YT+    P ++  FR+DS TG+++  APLDRE    Y ++V A D G  S      IL+ +ED+ND  P F    Y   + E  +V + +  VQATD D+G N +++Y FL  A  +          F I + SG I +   LDRE +  Y + + A +    R  ++TV  ++ VLD NDN P F     ++    D     G+ +    A   D   NAE+TYS+V
Sbjct: 1209 NADDTFVVLSQTGRLKVAKALDHET----------VRSYRFGVKATFRRDEVDVVAQVLVTVHVGDVNDNRPVFESSVYEGVVMENLPAGVPVVQVRATDRDGGANGQLAYSLAEEAGGEGGAARDLFSVDAESGWVR-TLRP---LDREARAGHELAVVATDLGDPARLSATASVRVAVADANDCPPRFLRGSYAGD--VPEDSAPGQVVAVVGADDADATPDNGQLTYYLTGAPRVAAEDALPGHGEHVLRESRTVAISVELLTILPPTVRETESACQFNIGVSIVDGGEPP---LQTTARVVVRVSDENDNAPQFVEKRVQVKALARERSVAREAVCRVYARDADHGANAELSY-SIDGGNEAGKFFIDPKDGVISTRNPCPVGTNDFLTVPCDIYVVVGEWKLHLKQPVDREERDRYQIEVTATD-GAFVSKAVVDVAVLDANDNSPVCDKGLLYAV-----AVAEDVAPGIFLLLVSARDADIGANAAIQYTLHG--PGAE-HFRMDSATGELFTLAPLDREAVPAYALSVRATDGGGRSCQA--EILVSLEDVNDNAPQFPASHYAVSVYESTAVETLLTRVQATDSDLGLNRKVTYSFLDSAGGH----------FAIDERSGIISLKRPLDREHQAVYELTVRAEDGDVFRPLTSTVGVSVAVLDVNDNPPAFEQREYHAAAPEDAAP--GSAVLSVLAISKDAGANAEVTYSVV 1888

HSP 2 Score: 149.058 bits (375), Expect = 2.982e-36
Identity = 148/523 (28.30%), Postives = 232/523 (44.36%), Query Frame = 2 
Query: 1073 GRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEA-IILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLIS-DINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK-NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV 2632
            G+ V ++   V V V D+NDN P F+     P  AV E  +    ++  + A D+D  +NG ++Y +         + F +++ +G++ L++    D   K +   V+A DS   P  LSS  ++ I V  +N  +P     F  PF S         ++PEN+ P  + + ++Q +  +     F   S+ + + F   S D N   + +++   S D E Q T  + +   D+    +++ N+ I V D NDNPP F+           +     + QV A D D+G N  L Y IIN    S   F IDS +G +     LD E+   +N  V A D G P LT    + I V DIND PPVF  + Y   + E A     V  VQA+D D     ++ Y  LS          N    F +   SG I I++   +   P Y + I   + V    F++T    + +   N ++P F    N  +  I     +GT + L +ATD D      ++YSIV
Sbjct:  517 GKFVSTAQAVVAVRVEDVNDNAPVFVN---LPYYAVVEVDAAPGSVVYTIAAFDRDVGRNGEVSYSLKEE-----HEYFDVEARSGDVSLRRSFTADMSSKDFTVNVVATDSGVPP--LSSEVSLPITV--INKAMP----IFERPFYSK--------SVPENIKPH-TPILNLQAKSPEGLPLIF---SITDGDPFNQFSIDFN---TGVVNVIGSLDHETQTTFKLTVRATDSVTGSHAEVNLDILVQDVNDNPPLFSQSAYATTLSEAALIGISVLQVSATDADIGSNKALYYQIINNGKNSSECFYIDSSSGLILTSRFLDYEQNQVHNFLVRASDSGMPFLTSDVPVTITVTDINDNPPVFNQLLYEAFVSELAPRGHFVTRVQASDADASDTDKLEYSILSG---------NDHMNFVVDGKSGIISISNLRKQTLAPQYRLNISVSDGV----FTSTAQVHVNIQSANLHSPIFGQ--NEYVKEIPENSEVGTLLTLVQATDKDWGPLGHVSYSIV 993

HSP 3 Score: 149.058 bits (375), Expect = 3.192e-36
Identity = 163/603 (27.03%), Postives = 253/603 (41.96%), Query Frame = 2 
Query:  632 ECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEG-VDLEFEILDINDNRPMWPTNVVELLYPE-STEKQSIKLAIAYDKDIG-ENAMIKYYL----QPIYHDNLNFNLEN--SENR--------LILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTG-----------------------------ELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVH-INIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDN--KESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQG--EPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLS 2284
            +  S+  ++G  +  + +DRE      + G  +  +     +  R      +   + D ND  P +         PE S   Q + +  A D D   +N  + YYL    +    D L  + E+   E+R        L + P    + E+   FNI +   D G P L +T  V V V D NDN PQF++          E +     + +V A D D   N  ++Y ID         +FF+D   G                             +L LK+P+D +   + Y+  V A D A       S A V++ V D ND  P          V D+  G ++ + + E++ P    L  +   DAD    + I  +L     E FR+ S   ++  F L+     DRE      + +   D G       I++++ D NDN P+F A  +  +V E+T+     + +V+A D DLG N ++ Y+ ++    +   F ID  +G + +  PLDRE Q  Y +TV A D     P LT T  + + V D+ND PP FE  EY    PEDA+  S V  V A  +D G NA ++Y  +S
Sbjct: 1324 DLFSVDAESGWVRTLRPLDREA-----RAGHELAVVATDLGDPARLSATASVRVAVADANDCPPRFLRGSYAGDVPEDSAPGQVVAVVGADDADATPDNGQLTYYLTGAPRVAAEDALPGHGEHVLRESRTVAISVELLTILPPTVRETESACQFNIGVSIVDGGEPPLQTTARVVVRVSDENDNAPQFVEKRVQVKALARERSVAREAVCRVYARDADHGANAELSYSIDGGNEA---GKFFIDPKDGVISTRNPCPVGTNDFLTVPCDIYVVVGEWKLHLKQPVDREERDR-YQIEVTATDGA-----FVSKAVVDVAVLDANDNSP----------VCDK--GLLYAVAVAEDVAPGIF-LLLVSARDADIGANAAIQYTLHGPGAEHFRMDSATGEL--FTLA---PLDREAVPAYALSVRATDGGGRSCQAEILVSLEDVNDNAPQFPASHYAVSVYESTAVETL-LTRVQATDSDLGLNRKVTYSFLD---SAGGHFAIDERSGIISLKRPLDREHQAVYELTVRAEDGDVFRP-LTSTVGVSVAVLDVNDNPPAFEQREYHAAAPEDAAPGSAVLSVLAISKDAGANAEVTYSVVS 1889

HSP 4 Score: 137.887 bits (346), Expect = 6.803e-33
Identity = 169/654 (25.84%), Postives = 269/654 (41.13%), Query Frame = 2 
Query:  794 ILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPK-FDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADED--DKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDR-ENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIG----QVEAIDKDLGKNAELRYTIINVQPRSDAR----FRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPS-LTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGK-NARISYHFLS-------DAFP-YSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTE-IALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGIL 2683
            I   N + P++  N      PE++E  ++  L  A DKD G    + Y +   +  +  F ++  EN  I T +  D +   +R F+I I+A+D G  V  +T  VKV   D NDN+P F+ N +  N  V         IL+V A D D   N  + Y +       + D   +   TG +  K+ L    G +   F V A+D  P         +V +  AD   E+P          V++       I +        +  A +      E+  D +F+  S   +       D   V+S+      +F R E      V +T              ++V D NDN P F      +V E     N   G    QV A D+D G N +L Y++              F +D+ +G +    PLDRE +  + + V+A D G+P+ L+ T ++ + V D ND PP F    Y   +PED++    V VV A D D    N +++Y+          DA P +  H         I  +   I+  +  + E+   ++I +  ++   P     T    + V D NDNAP+F       + ++  E+S+  E +    A DAD   NAEL+YSI    +   F +D   G++
Sbjct:  943 IQSANLHSPIFGQNEYVKEIPENSEVGTLLTLVQATDKDWGPLGHVSYSIVNQFAGD-RFTID--ENGQIFTSEPLDREDPLERVFDINIMAKDGGGRVGFTT--VKVIATDENDNKPTFVTNEYFGN--VLARAEKGTAILQVLATDPDEGSNADLVYTLYKGESDAVEDVLEVQPLTGHVVTKESLVGLEGSR-MSFFVKAEDKGPERKHSVVPVSVSVLPADA--ELPAFTEAAYALTVAEDAEVGSEIGVARLAGNDSATYAAVPGGGGAENNADDTFVVLSQTGRLKVAKALDHETVRSYRFGVKATFRRDEVDVVAQVLVT--------------VHVGDVNDNRPVFES----SVYEGVVMENLPAGVPVVQVRATDRDGGANGQLAYSLAEEAGGEGGAARDLFSVDAESGWVRTLRPLDREARAGHELAVVATDLGDPARLSATASVRVAVADANDCPPRFLRGSYAGDVPEDSAPGQVVAVVGADDADATPDNGQLTYYLTGAPRVAAEDALPGHGEHVLRESRTVAISVELLTILPPTVRETESACQFNIGVSIVDGGEP-PLQTTARVVVRVSDENDNAPQFVEK-RVQVKALARERSVAREAVCRVYARDADHGANAELSYSIDGGNEAGKFFIDPKDGVI 1566

HSP 5 Score: 137.502 bits (345), Expect = 9.075e-33
Identity = 185/738 (25.07%), Postives = 292/738 (39.57%), Query Frame = 2 
Query:  614 GDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEA-----IILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK-ESFRLISDINKVKSFILSASKSFDREN--QQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDA---RFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY------VFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCS 2767
            GDP F++  SI   TG+  +   +D ET        +   S+      T     V+L+  + D+NDN P++  +       E+     S+    A D DIG N  + Y +     ++      +S + LILT +F +DYE  +  N  + A D G P L+S + V +TV DINDN P F       NQ +YE    E       + +V A D D+    ++ Y I           F +D  +G + +   L        Y+  +   D        +S+A V + +   N   P   I+    +V +         IPEN +   + L  +Q  D D      +  S+ N+    R   D N      +  S+  DRE+  ++   + I  +D G       + +  TD+NDN P F     F      + +   I QV A D D G NA+L YT+   +  SDA      +   TG +     L   E    +  V A D+G         + + V   +   P F    Y   + EDA V S++GV +    D    A +     ++         NA + F +   +G + +   LD ET  SY   ++A    +     A V  T+ V D NDN P F + +   ++  +     G  +   RATD D   N +L YS+             +F++D  SG +   + +  E      L V   D G P + S
Sbjct:  682 GDP-FNQ-FSIDFNTGVVNVIGSLDHETQTTFKLTVRATDSV------TGSHAEVNLDILVQDVNDNPPLFSQSAYATTLSEAALIGISVLQVSATDADIGSNKALYYQIINNGKNSSECFYIDSSSGLILTSRF-LDYEQNQVHNFLVRASDSGMPFLTSDVPVTITVTDINDNPPVF-------NQLLYEAFVSELAPRGHFVTRVQASDADASDTDKLEYSILSGNDHM---NFVVDGKSGIISISN-LRKQTLAPQYRLNISVSDGV-----FTSTAQVHVNIQSANLHSP---IFGQNEYVKE---------IPEN-SEVGTLLTLVQATDKDWGPLGHVSYSIVNQFAGDRFTIDENGQ----IFTSEPLDREDPLERVFDINIMAKDGGGRVGFTTVKVIATDENDNKPTFVTNEYFGNVLARAEKGTAILQVLATDPDEGSNADLVYTLY--KGESDAVEDVLEVQPLTGHVVTKESLVGLEGSRMSFFVKAEDKGPERKHSVVPVSVSVLPADAELPAFTEAAYALTVAEDAEVGSEIGVARLAGNDSATYAAVPGGGGAE--------NNADDTFVVLSQTGRLKVAKALDHETVRSYRFGVKATFRRDEVDVVAQVLVTVHVGDVNDNRPVFESSVYEGVVMENLPA--GVPVVQVRATDRDGGANGQLAYSLAEEAGGEGGAARDLFSVDAESGWVRTLRPLDREARAGHELAVVATDLGDPARLS 1365

HSP 6 Score: 124.79 bits (312), Expect = 7.252e-29
Identity = 179/723 (24.76%), Postives = 307/723 (42.46%), Query Frame = 2 
Query:  638 ISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-----AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDAD-EDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVL--DCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY---VFNLDYTSGILFLAKKIEGFRKLRLT--VRVCDSGLPQK 2761
            IS+Q+ T +        R  L     DGK V + + +           +   + D+NDN P++    V L Y    E  +   ++     A+D+D+G N  + Y L+    ++  F++E     + L   F  D  +K F  + +VA D G P LSS +++ +TVI  N   P F +  +  +++V E       IL + A    S +   + + I    P    +QF +D +TG + +   LD++    ++K  V A DS    +   +   ++I V DVND  P     F+    +   +    I I          +  +   DAD   +K+     ++N ++      I+     IL+ S+  D E  Q  +  +   D+G    + ++   I VTD NDNPP F            + R   + +V+A D D     +L Y+I++     +  F +D  +G + I     +     Y +  I+V  G    T T  + + ++  N   P+F   EY  +IPE++ V + + +VQATD+D G    +SY         S+    A ++F I ++ G+I  +  LDRE  P   +    IN++           T+ V+  D NDN P F    N    ++      GT I    ATD DE  NA+L Y++ +        V  +   +G +   + + G    R++  V+  D G  +K
Sbjct:  496 ISVQNATHLRS------RYELAVKVFDGKFVSTAQAV-----------VAVRVEDVNDNAPVF----VNLPYYAVVEVDAAPGSVVYTIAAFDRDVGRNGEVSYSLK---EEHEYFDVEARSGDVSLRRSFTADMSSKDF-TVNVVATDSGVPPLSSEVSLPITVI--NKAMPIFERPFY--SKSVPENIKPHTPILNLQA---KSPEGLPLIFSITDGDP---FNQFSIDFNTGVVNVIGSLDHET-QTTFKLTVRATDSVTGSH---AEVNLDILVQDVNDNPP----LFSQSAYATTLSEAALIGI---------SVLQVSATDADIGSNKALYYQIINNGKNSSECFYIDSSSGLILT-SRFLDYEQNQVHNFLVRASDSGMPFLTSDVPVTITVTDINDNPPVFNQLLYEAFVSELAPRGHFVTRVQASDADASDTDKLEYSILSGNDHMN--FVVDGKSGIISISNLRKQTLAPQYRLN-ISVSDG--VFTSTAQVHVNIQSANLHSPIFGQNEYVKEIPENSEVGTLLTLVQATDKDWGPLGHVSY---------SIVNQFAGDRFTIDEN-GQIFTSEPLDRE-DPLERVF--DINIMAKDGGGRVGFTTVKVIATDENDNKPTFVT--NEYFGNVLARAEKGTAILQVLATDPDEGSNADLVYTLYKGESDAVEDVLEVQPLTGHVVTKESLVGLEGSRMSFFVKAEDKGPERK 1145

HSP 7 Score: 117.857 bits (294), Expect = 9.657e-27
Identity = 183/780 (23.46%), Postives = 319/780 (40.90%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSEC--ISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNT---YRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKL-AIAYDKDIGENAMIKYYLQPIYHDNLNFNLENS----ENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPEN---MNPQQSDLAHIQIEDADEDDKSFIDCSLDNKES---FRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGK----NENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRE-TKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMIIV 2788
            + EE P  T++  ++   RD   S   F+++   + +      +   TG     + +D ET        K    + ++ +++    +K    +   + D ND+ P++ +   E    ES    S  L  +A D+D G NA + Y ++       N N+ NS        IL+   ++D      + + + A DRG P  S+T  V+V V   ++  P+F    +  +  V E     + +L VTA  + +     +NY I         D F+++  +G +  K+ LDY+R   SY+  + A +       LS++A+V I ++D ND  P         F   +Y G V          +N +   L  I+  D D +  S +   +   E+   F + S    +K       K  D E     H ++   D+G      E   N+ I V D ND+PP F+      V    +Y    +  + A D D   +     +  NV  +    F I++ TG + +        +  Y + V   D G+   T    + + VED+ND  PVF  + Y   +  DA+  S V  + A DRD+G+N  +SY    +            E F ++  SG++ +      + +   +++ + A +   P   S+ VS  ITV+  N   P F  P      S    ++I     +     A   +   L +SI    DP+  F++D+ +G++ +   +  E     +LTVR  DS        +L I+V
Sbjct:   25 VAEETPPNTEILRLNATDRDDTSS-LTFSIVSSTDVASLRKFKLDYNTGALSTVESLDHET--------KQSHILTVMVRDSEIPVQKAYATVVVNVRDSNDHAPLFTSRHYEGRVVESAALGSAVLEVVALDRDRGPNAEVAYSIEA-----GNRNVGNSFTIHPTMGILSVAKELDRAVVEAYELVVRAVDRGEPPRSATTAVRVLVTVADNAPPKFTSKDY--SAEVSEGARPGSFVLMVTASSRST-----VNYEIRDGN---FEDTFYVNPTSGVITTKELLDYER-KPSYQLKIQATNMV----GLSTNASVSIHLSDENDNAPV--------FDRSQYRGVVSEEAQAQTVVLNDKNVPLV-IRATDLDSEQNSLLVYQIVEHEAQTYFSIDSSTGAIKMI-----KVLDYEKTPEFHFQVRVSDSGSPKLSAETPANVTITVLDANDSPPIFSRAVYETVLLTPTYSGVRLLSMSATDPDTDASLTFSISTGNVGDK----FAINARTGDISVQNAT--HLRSRYELAVKVFD-GKFVSTAQAVVAVRVEDVNDNAPVFVNLPYYAVVEVDAAPGSVVYTIAAFDRDVGRNGEVSYSLKEE-----------HEYFDVEARSGDVSLRRSFTADMSSKDFTVNVVATDSGVP-PLSSEVSLPITVI--NKAMPIFERP----FYSKSVPENIKPHTPILN-LQAKSPEGLPLIFSITDG-DPFNQFSIDFNTGVVNVIGSLDHETQTTFKLTVRATDSVTGSHAEVNLDILV 734

HSP 8 Score: 83.5741 bits (205), Expect = 2.632e-16
Identity = 64/239 (26.78%), Postives = 118/239 (49.37%), Query Frame = 2 
Query: 1802 INVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDAR-FRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTA 2512
            ++V + N++ P+F+  ++  +V E T   N +I ++ A D+D    + L ++I++    +  R F++D  TG +     LD E +  + +TV+  D   P       +++ V D ND  P+F +  Y  ++ E A++ S V  V A DRD G NA ++Y   +          N    F I    G + +  +LDR    +Y +++ A++   P + SAT +  + V   ++  PKFT+
Sbjct:    4 VSVINTNEHRPQFSRPRYEVSVAEETP-PNTEILRLNATDRD--DTSSLTFSIVSSTDVASLRKFKLDYNTGALSTVESLDHETKQSHILTVMVRDSEIPVQKAYATVVVNVRDSNDHAPLFTSRHYEGRVVESAALGSAVLEVVALDRDRGPNAEVAYSIEAG-------NRNVGNSFTIHPTMGILSVAKELDRAVVEAYELVVRAVDRGEPPR-SATTAVRVLVTVADNAPPKFTS 231
[Close]
BLAST of Protocadherin-h vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006996.1 (pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 gene:ENSPMAG00000006222.1 transcript:ENSPMAT00000006996.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 181.03 bits (458), Expect = 6.105e-46
Identity = 180/652 (27.61%), Postives = 292/652 (44.79%), Query Frame = 2 
Query:  782 LEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYET--KRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKD-SEQNGRIN--YYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDREN------QQTEHVRITCRDNG----KNENSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAI-NVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGIL 2683
            +   +LD+NDN P++  +       E+    +  + + A D+D   N  I Y + P    +  F++  S    ++T    +DYE       ++TI+A D G P L+ST+   V V D NDN P F +N +  + A+ E     A +L V A D D S + G+++  Y ++ S       QF +++ +G++     LD +     Y  IV A D      + +  ATV I + DVND  P    +   P+          + I EN  P  +D+  +   D D ++   +  ++D    F     IN     I +     DRE+           + ++  D G    +   S  + + + D NDN P F    +   V E     N  + QV A D D G N  + Y++    PR D  F++D+ TG +     LDRE    Y + ++A D+G P+L+ T  + ++V D+ND  P F        + E  + +S V  +  TD D G NA +S+ F++          N   +F +    G +     LDRETK SYS++IEAI N     + + T +  + VLD NDN P F     +  +S+    + G  I   +ATD DE  N  + Y I+       F ++ +SG++
Sbjct:  117 VRINLLDVNDNTPVFQRDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSILPTSAYSSYFSITVSGGYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRNSY--SIAIPENILAGATVLYVNATDGDQSPEYGQLSLIYSLEGST------QFRINARSGDITSTTLLDRE-AVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPA---WRDLPYA---------VTIVEN-TPGGTDIFTVSAADPDLNENGTLVYAIDPPNPFY---RINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLP-ANSTLFQVTATDPDEGANGNVTYSMTAALPRPD--FQLDAATGLITTLVQLDREAVAAYQLRLVATDRGTPALSSTTTLSLVVLDVNDNAPTFHPARSAVSLMESVARDSVVISLNCTDADSGLNAELSF-FITGG--------NQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNGPAGSRRTGTTTLDVLVLDVNDNRPLFLE--GSYEVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQDGNFLVNVSSGLI 729

HSP 2 Score: 164.851 bits (416), Expect = 4.708e-41
Identity = 181/736 (24.59%), Postives = 323/736 (43.89%), Query Frame = 2 
Query:  653 KTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKN-TYRKEGVDLEF-EILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-----AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETT-SVEAIILKVTAIDKDSE--QNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINI---YFTTPFVSDRYNGTVHINI--PENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--------KNENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELR-----YTIINVQPRSDARFRIDSFTGKMYID-APLDREEQDHYNIT--VIAVDQGEPSLTGTGNILILVEDINDMPPVFET-VEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMIT--SKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLP 2755
            +TG+  + + +DRE +     + +   ++R    N +Y ++  D+    ILD NDN P++     E   PE++   ++   +     A D D G NA + Y L          + +     + L    D +        +TI+ +D GR   ++T+ + VTV+D+NDN P F  NV      V E + +V   ++ V A+D+D      G + Y    S+     D F +D  TG +    P+DY+     Y  +V+A D AP P+    +A+ E++V+  N+   +++     +          GTV + +  P+   P +  L    +     +DK       DN E   LI+ +       ++   + DRE   +  + +  RD G         N+    + +NVTD+NDN P+F A          ++     +  + A D+D G N  +      +T   + P+      I + +G   +D A  D  E+    I   ++A+D G P  + T N+ ++V D+ND  P+F +   Y   + E  +  + V  V ATD D G N ++++             +   +K  I    G I +   + +DRET+ +Y++++ A++  NP   S +    + V D ND  P F AP+    +S+    S+G+ +A  +AT+  +  N + TY I        F +  TSG++   + ++ + +  LT    D G P
Sbjct: 1445 QTGLVYVNRPLDRERVA----EYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGGR--RNATVRLGVTVLDVNDNTPTF--NVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRY----SIASGGNDTFGIDESTGLIVTVAPIDYET-RPEYLLMVVATDQAP-PFH---TASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAE---LIAALQGE----ITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQY--ILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRI----------ESGGGDKLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNP-PLSGSAIVRVLVDDVNDERPAFLAPVQT--VSVLESLSVGSFVATVKATENYKGHNTKYTYKIA-GIGKNAFTVHATSGLVTSTRLLKSYERFNLTAVATDHGRP 2140

HSP 3 Score: 160.999 bits (406), Expect = 8.474e-40
Identity = 188/711 (26.44%), Postives = 312/711 (43.88%), Query Frame = 2 
Query:  659 GMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI--AYDKDIGENAMIKYYLQPIYHDNLNFN------LENSENRLIL-TPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKS-YKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSAS----------KSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAHKFN---FNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIIN---VQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEP-SLTGTGNILILVEDINDMPPVF-----ETVEYR-FQIPEDASVNSKVG-VVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVN------------PRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIV 2632
            G    +  +DRE      L   ++DG   ++I ++      K G  +   + D NDN P +      L+    +      L +  A D+D G N  +        H            ++N     I+   K D   +T +F    IVA D G P  S+T N+ V V+D+NDN P F+    +   +V E  +   ++  V A D D+  NG++ + I+        D+  +    G +++    + DR  ++ Y  +V+A D    P  LS SA V + V DVNDE P     F  P  +        +++ E++    S  + +    A E+ K       + K +++ I+ I K  +F + A+          KS++R N     +     D+G+        + + V D ND+ P F    N    N+ E      R I +V A+D D G+N  +RY+ ++   V  R    FRI++ +G +     LDRE Q  Y++ ++A DQG+P S   T  + ++++DI+D  PVF         Y+ F IPE +   + VG V  A D D+G NA I Y+F++          N   KF + +  G +++ S LDRE  P Y+II++A +  N            P K        + + D ND  P FT     + +++D +  +G+E+    A D D   N+ + Y I+
Sbjct: 1783 GEITTQAALDREATDSYMLTVLSRDGGPREAIAVLTN----KPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAH--THTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYA-VSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGG----GDKLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPP--LSGSAIVRVLVDDVNDERPA----FLAPVQT--------VSVLESL----SVGSFVATVKATENYKGH-----NTKYTYK-IAGIGK-NAFTVHATSGLVTSTRLLKSYERFN-----LTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMPVVIR-IVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANA-IVYYFIAAG--------NEGNKFNLSR-WGLLVVLSDLDREVSPYYAIIVKASSNPNWTPAVTTGPEFDPSKDRTLREVRVYLEDINDQWPVFTNHEYTAGVAVDAK--VGSELLQLEAVDRDVGNNSIVLYRIL 2439

HSP 4 Score: 152.14 bits (383), Expect = 4.037e-37
Identity = 183/709 (25.81%), Postives = 304/709 (42.88%), Query Frame = 2 
Query:  782 LEFEILDINDNRPMW------PTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLN-FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAP-YELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDL----AHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRIT--CRDNGKNENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLG--KNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPY-SLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIII--------EAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAEL-----TYSIVRATDPYVFNLDYTSGILFL-------AKKIEGFRKLRLTVRVCDSGLPQKCSE-DLMIIV 2788
            +   + D+ND  P +      P +V      E      I   +A D+D G N  ++Y +  I  D  N F +  ++  L +    ++D ET+ F+N+TI+A+D G P L+STL V V V+D++DN P F+      N ++ E  +V AI+ +V A D +  +N        P+        F+ DS TG + + +PLD +R    Y+  +  +D+   P Y    S  + + + D ND  P  +              T    IPEN +P  + L      I   DAD    + +  SL    S   + D ++  +  ++  +  DRE      + +T   +D G+   +  + + V D NDN P F       +V EN+      +  V+A+D+DLG      +RY+I +     +  F ID  TG +   AP+D E +  Y + V+A DQ  P  T +  + + +++  D    F    Y+  + E A   + V  V A          +    L   +     H+    +  + I    GEI   + LDRE   SY + +        EAI V+   K  A V   +T  D NDN+P+F A  + +L+ +    + GT + +  ATD D   N  +     T++  R    Y+  +   SG+  +        +K   F   R+     D G P + +  +L +IV
Sbjct: 1268 VSVHVADVNDVTPWFLRSYEGPIDV-----SEGQPGPRIATFMASDQDSGLNGELEYSI--IDGDPRNEFVISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLN--LPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRER-VAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFS------------QVTYEAEIPEN-SPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDR-GNVSMALGQGLDREGIPGGRLELTILVQDGGRRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIAS---GGNDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQAPPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDREATDSYMLTVLSRDGGPREAIAVLT-NKPGAYVYVNVT--DENDNSPEFEAG-SATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIV--ALDGGSPPRSTTFNLSVIV 1943

HSP 5 Score: 149.443 bits (376), Expect = 2.349e-36
Identity = 153/562 (27.22%), Postives = 254/562 (45.20%), Query Frame = 2 
Query:  764 RKEGVDLEFEILDINDNRPM------WPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL--------DNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN---ENSKNIIINVTDKNDNPPKF-------AHKFNFNVNENTSYRNRDIGQVE-AIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVD--QGEPSLTGTG------------NILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKF 2332
            R    +L   +LD+NDN P+      +  +VVEL  P +     +    A D D G N  + + ++    D L+     S+  + + P  ++D ET+  + + +VA DRG P LS +  V+V V D+ND RP F+  V     +V E+ SV + +  V A +     N +  Y I        ++ F + + +G +   + L   + ++ +    +A D    P  L   A + ++V DVND  P   ++   P      NGTV +NI E M P    +  +   D DE     +  S          + ESFR+        S I+S +++ DRE+Q    + +   D G+    E+++ + + + D +DN P F       A   +F++ E+ S     +G V  A+D D+G NA + Y I         +F +  + G + + + LDRE   +Y I V A       P++T TG             + + +EDIND  PVF   EY   +  DA V S++  ++A DRD+G N+ + Y  LS    Y  H +N+  + 
Sbjct: 1933 RSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTL----VASVWATDADAGPNGQVTFRIESGGGDKLSIG--PSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPV--QTVSVLESLSVGSFVATVKATENYKGHNTKYTYKI----AGIGKNAFTVHATSGLVTSTRLL---KSYERFNLTAVATDHGRPP--LWGQAGLYVEVLDVNDHRP---VFVLPP------NGTV-VNITEVM-PVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRI-----NATSGIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEH-SPPGTAVGNVSGAVDADVGANAIVYYFI--AAGNEGNKFNLSRW-GLLVVLSDLDREVSPYYAIIVKASSNPNWTPAVT-TGPEFDPSKDRTLREVRVYLEDINDQWPVFTNHEYTAGVAVDAKVGSELLQLEAVDRDVGNNSIVLYRILS--ILYIKHSSNSSTRM 2454

HSP 6 Score: 142.124 bits (357), Expect = 4.652e-34
Identity = 159/574 (27.70%), Postives = 245/574 (42.68%), Query Frame = 2 
Query: 1091 STLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEA------IILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYE-LSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENM-NPQQSDLAHIQIEDAD-----EDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD-----IGQVEAIDKDLGKNAELRYTIINVQPRS----DARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGE-PSLTGTGN--ILILVEDINDMPPVFETVEYRFQIPEDASVNSKV-----GVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEI--MITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADEN--KNAELTYSIVRATDPYVFNLDYTSGILFLAKKIE 2704
            +T +V + + D NDN P F         A YE    E        +  VTA D D   N R+ Y I   +       F +D+ TG L   K LD++     Y  +V A D    P   L+S+ATV + VADVND          TP+    Y G   I++ E    P+   +A     D D     E + S ID    N+          +V+ ++       DRE Q   ++ I  +D G     ++  + + V D +DN P F      N+  N S          + +V A D + G+N      ++   P S    +  F  DS TG +Y++ PLDRE    Y +T+   D  + PS     +  +++ + D ND  PVF  V Y  +IPE+ S N  V     G + A+D D G NA ++Y  L  +  Y          F I +D G +   +   LDRE  P   + +  I V +  + +ATV   +TVLD NDN P F      + + ++   ++GT + + +A D D        + YSI    +   F +D ++G++     I+
Sbjct: 1154 ATTSVLIRITDENDNAPAF-------GAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAI---VSGNTAATFGIDNGTGVLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVND---------VTPWFLRSYEGP--IDVSEGQPGPR---IATFMASDQDSGLNGELEYSIIDGDPRNEFVISPADGDLRVRRYV-----ELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVF-----LNLPANASLSEAAAVLAIVSRVRASDANEGRNCA---ALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPEN-SPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAY----------FLIDRDRGNVSMALGQGLDREGIPGGRLEL-TILVQDGGRRNATVRLGVTVLDVNDNTPTFNVTSQTAHV-LENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGND-TFGIDESTGLIVTVAPID 1676

HSP 7 Score: 126.716 bits (317), Expect = 2.177e-29
Identity = 168/735 (22.86%), Postives = 291/735 (39.59%), Query Frame = 2 
Query:  668 KIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMW--PTNVVELLYPESTEKQSIKLAIAYDKDIG--ENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRI-------NYYIDPSMPQFIRDQF-FLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAP----APYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFR------LISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHKFNFNVNE-NTSYRNRDIGQVEAIDKDLGKNAELRYTI-------INVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRAT-----DPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
             + + +DRE +      G+   +I L+     R   V L   +LD+NDN P +   +    +L        S+ +  A D+D+G  +   ++Y +    +D   F ++ S   ++      +DYET+  + + +VA D+  P  +++  ++V++ +  D +  F    +    A+ E      ++++V A    +     +        ++ D    Q   D    + +  GE+  +  LD +    SY   V+++D  P    A       A V + V D ND  P+      T            + + E+  P  + L  +   D D      +          R      LI       + +  A   F  +  Q    RI   D G    S   N+ + V D NDN P F     + V+          +  V A D D G N ++ + I       +++ P SD   R+          A +DRE +  Y + V+AVD+G P L+G+  + +LV+D+ND  P F        + E  SV S V  V+AT+   G N + +Y              NA   F +   SG  ++TS    ++   +++   A +   P  +       + VLD ND+ P F  P N ++++I     +   I    A D DE +N  + YS + A      D   F ++ TSGI+  A+ +  E      L +   D G P
Sbjct: 1563 ALGQGLDREGIPG----GRLELTI-LVQDGGRRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDT--FGIDESTGLIVTVAP--IDYETRPEYLLMVVATDQAPPFHTASCELRVSLQNELDEKLSFSLAAYQ--AALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDRE-ATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSAT-----------LVEVRESAAPG-TLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKLSIGP-SDGIIRVAP-------GANIDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGIG-------KNA---FTVHATSG--LVTSTRLLKSYERFNLTAVATDHGRPPLW-GQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQP 2252

HSP 8 Score: 110.538 bits (275), Expect = 1.898e-24
Identity = 148/590 (25.08%), Postives = 247/590 (41.86%), Query Frame = 2 
Query: 1001 LTPKFDVDYETKRFFNITIVAEDRG-RPVLSSTLN-----VKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFL----DSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFI-LSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVT--DKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVF-----ETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF------TAPINNSLISIDTEKSIGTEIA-LFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLA 2692
            +T +  +D E    + +T+++ D G R  ++   N     V V V D NDN P+F        + V E+ +   ++  + A D+D+  NG ++          I  Q+ L    +S    + + K    ++  +   F ++A D    P   S++  + + V DVND +P     F +P       G   +++ E   P  + +A +   DAD      +   +++    +L   I      I ++   + DRE +    + +   D G    S + I+ V   D ND  P F A     +V E+ S  +  +  V+A +   G N +  Y I  +   +   F + + +G +     L   E+  +N+T +A D G P L G   + + V D+ND  PVF      TV     I E   V  ++  V A D D G+N  + Y FL      S      +E F+I   SG I     LDRE++  YS+I+ A +   P  + +T    + + D +DN P F       AP  +   SI      GT +  +  A DAD   NA + Y I    +   FNL     ++ L+
Sbjct: 1785 ITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATLVE-VRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPR--STTFNLSVIVLDVNDNVP----IFLSP-------GGYAVSVVELGAPG-TLVASVWATDADAGPNGQVTFRIESGGGDKL--SIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSF-VATVKATENYKGHNTKYTYKIAGIGKNA---FTVHATSGLVTSTRLLKSYER--FNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLPPNGTV---VNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGS----RDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQS--FSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGNEGNKFNLSRWGLLVVLS 2342

HSP 9 Score: 110.153 bits (274), Expect = 2.445e-24
Identity = 123/465 (26.45%), Postives = 202/465 (43.44%), Query Frame = 2 
Query: 1430 SSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITC-----RDNGKNENSKNII-INVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKM----YIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAI-NVVNP---RKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFR----ATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLA-------KKIEGFRKLRLTVRVCDSG 2749
            ++ +V I++ D ND  P                 T  + + E  +     +A++   D DE D + +  ++ +  +       N     +L+A K+ D E     ++ +       RD  +   S   + ++V D ND  P F   +   ++ +       I    A D+D G N EL Y+II+  PR++  F I    G +    Y++  LDRE Q  YN+T++A D G P L  T  + + V D++D  PVF  +     + E A+V + V  V+A+D + G+N          +F       N    F     +G + +   LDRE    Y + +    N  NP   RK S  +   +T+LD NDN+P F+     + I  ++    GT + +      A+DAD   NA L YS++  +  Y F +D   G + +A       + I G R L LT+ V D G
Sbjct: 1154 ATTSVLIRITDENDNAPAFGA------------ATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSGNTAATFGIDNGTG--VLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRSYEGPIDVSEGQPGPRIATFMASDQDSGLNGELEYSIIDGDPRNE--FVISPADGDLRVRRYVE--LDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSF------CNGERAFYADSQTGLVYVNRPLDRERVAEYRLTLTVRDNPDNPSYARKDSDIM--IVTILDENDNSPVFSQVTYEAEIPENSPN--GTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAY-FLIDRDRGNVSMALGQGLDREGIPGGR-LELTILVQDGG 1588

HSP 10 Score: 104.375 bits (259), Expect = 1.478e-22
Identity = 115/411 (27.98%), Postives = 175/411 (42.58%), Query Frame = 2 
Query: 1421 ELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL---DNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDA-RFRIDSFTGKMYIDAPLDREE--QDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPR-KFSATVSATITVLDCNDNAPKFT-APINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSI 2629
            E   SA V I + + ND  P     F+ P     YN    +++ EN     S    +Q+   D D   F   S    D+ + F L        S ++S + + D E      V +  RD G  E +  + IN+ D NDN P F                  + +V A D+D   N ++ Y+I+     S      +    G + +   LD E+      ++T++A+D G P L  T   ++ V D ND  P+F+   Y   IPE+    + V  V ATD D        Y  LS    YSL  +    +F+I   SG+I  T+ LDRE    Y +I+ A++  +   + +   +  IT+LD NDN P +   P     ++I      GT+I    A D D N+N  L Y+I
Sbjct:    9 EHWGSARVHITLINENDNRP----IFSLPL----YN----VSVWENATLGTS---VVQVLATDLDAGVFGQVSYHFSDDSDKFSL-----DPASGLISVAAALDFEATPRFTVTVMARDGGGQETAGRVRINLLDVNDNTPVFQRDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSILPTSAYSSYFSITVSGGYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRNSYSIAIPENILAGATVLYVNATDGDQSPE----YGQLS--LIYSLEGST---QFRINARSGDITSTTLLDREAVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPY---AVTIVENTPGGTDIFTVSAADPDLNENGTLVYAI 387

HSP 11 Score: 72.0182 bits (175), Expect = 8.553e-13
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 2 
Query: 2105 GTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSAT---ITVLDCNDNAPKFTAPINNSLISIDTEKSIG-TEIALFRATDADENKNAELTYSIVRATDPY--VFNLDYTS--GILFLAK-----KIEGFRKLRLTVRVCDSGLP 2755
            G+  + I + + ND  P+F    Y   + E+A++ + V  V ATD D G   ++SYHF  D+           +KF +   SG I + + LD E  P +++ + A      R      +A    I +LD NDN P F     +S +    E     T +   RATD D   N ++TYSI+  T  Y   F++  +   G++ LA+     KI G   + LT+   D G P
Sbjct:   12 GSARVHITLINENDNRPIFSLPLYNVSVWENATLGTSVVQVLATDLDAGVFGQVSYHFSDDS-----------DKFSLDPASGLISVAAALDFEATPRFTVTVMA------RDGGGQETAGRVRINLLDVNDNTPVFQ---RDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSIL-PTSAYSSYFSITVSGGYGVVTLARALDYEKIPG-GTISLTIMALDGGSP 219
[Close]
BLAST of Protocadherin-h vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9])

HSP 1 Score: 245.358 bits (625), Expect = 8.547e-66
Identity = 232/764 (30.37%), Postives = 355/764 (46.47%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIK-LAIAYDKDIGENAMIKYYLQPIYHDN-LNFNLENSE----NRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRY----NGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL---DNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENS--KNIIINVTDKNDNPPKF-AHKFNFNVNE---NTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGIL----FLAKKIEGFRKLRLTVR 2734
            F + EE+P GT +         K+     F   G P   +       TG+     RIDRET            S++L   N    + + ++ ++ DINDN P +PT    L   ES +  +   +  A D D G N  + Y +     DN   F+L  +     + L +  K  +D ET  F+ + I A DRG P L     + +T++D ND+ P F QN +    ++ E T     IL+V+A D+DS  NG I Y ID    Q     F LDS TG ++ K+ LD++    SY F VIA D   P+  +L   ATV I V D ND  PQ+ I +  P   D+     N  ++ NI           A+I + D D +  S  +  +   D++  F+    +  +  + +   K  DRE     ++ +   D G    S    ++I+VTD NDN P F ++ +  N++E   N SY    + Q+ A D D G N  + Y+I          F++D  +G +    PLDRE+     IT+ A D G    TG+  + + + D ND  P F    Y+  I E AS+ + V  V ATD D G N RI+Y   S     S  + N    F++   +G +   S+LDRETK  YS  + A +  +P+  S+ V   +T+ D NDNAP F  P+     SI   +  G ++    ATDADE  NA ++Y I+   +   F++D ++G++     L  ++E F  L ++ +
Sbjct:   14 FHVQEEQPPGTYV--------GKVDGASAFE--GSP---KQFGFNSNTGVISTTARIDRETTTQ--------ISLQLRTLNP-SNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIAS--GDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYL--GSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQS-NSIFDLDSSTGVIRTKQNLDFEV-KNSYTFNVIASDGGVPSKNDL---ATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNI-----------AYILVTDKDSNTNSQTELKITNGDDEGCFK----VEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSY----VLQLNATDPDEGDNGTVSYSITGGNDL--GWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISS-----SDAQVNGL--FELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSS-VKVELTISDINDNAPVF-YPV-EYFASIMENEPPG-KLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAK 714

HSP 2 Score: 184.111 bits (466), Expect = 7.775e-47
Identity = 206/765 (26.93%), Postives = 330/765 (43.14%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTN-VVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRE--------NQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF-TAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIE------GFRKLRLTVRVCDSGLPQ 2758
            F + E  P GT +  V    +DK  S     V GDP  +    +    G+ KI   +DRE      +    +  I  +           +  E+LD NDN P + T+ V+  +       Q +  A A D D G+N +++Y L       L  N  ++   + L  K     ET+  + + ++A D G P   ST+ + +T + IN + P+F  + +  +    +  S +     V A+D+DS +NG++ Y    S+PQ   +  F     G+L ++K L       SY  IV A D     +  S+S  V I + D ND          + FV    N T    + EN +P  + +  +     D      I  SL + ES   +     V+S  ++     DRE        N           D     +   +I+ VTD NDN P F+   +   V+E  S     + +++A+D D G NA+  Y++++       +F I+S TG++++   LDRE    YN+ V A D    +L  T  I I V D ND  PVF   +Y   I EDA + S V  + A+D+DIG+N  I          YS+   N    F ++  +G +++   LD ET   Y + I A +       S+TV+ T+ VLD NDNAP F T P+    +++    + G  +    A+D D   NA + +S+   T    F+++  +  +     I+      G    +L V   D G P+
Sbjct:  748 FTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDP--TNLFLVDSTGGIIKINGDMDRE-----EKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWIN--STSGVIKLARKLTDGDETQ--YTVQVLASDSGSPPQHSTMTIHIT-LSIN-HPPKFTLSSYVTHVLASQPLSYQ--FFYVVAVDQDSGKNGQLFY----SIPQGNEEGLFGIFPGGKLYIRKSL-LQALKGSYDLIVRATDGGVPSF--SASVPVTIYIQDSNDH--------RSLFV----NNTFRFAVAENSSPG-TLVGTLVAHALDHSRTKDIVYSLISSESHFAV----DVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSE-LSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMD--KFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIK---------YSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQD-HGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVT---LTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPK 1457

HSP 3 Score: 182.185 bits (461), Expect = 3.177e-46
Identity = 186/656 (28.35%), Postives = 286/656 (43.60%), Query Frame = 2 
Query:  782 LEFEILDINDNRPMWPTNVVELLYPESTEKQ-SIKLAIAYDKDIGENAMIKYYL-QPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQA----VYETTSVEAIILKVTAIDKDSEQNGRINYYI----DPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGK--NENSKNIIINVTDKNDNPPKFA-HKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSA-TVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEG 2707
            +   ILD ND+ P++  N       E+T+   SI    A D+D G N  IKY +       N  F+L++S    ++  K ++D+E K  +   ++A D G P  +    V + V+D NDN PQ       P+        E + +   I  +   DKDS  N +    I    D    +     F+       ++L+KPLD +        + +     P+   L     V I V DVND  P         F S+ Y      NI E +    S +  +   D DE D   +  S+               +S +++ +K  DRE   +  + IT +D+G      S  + + + D NDN P+F    +   ++E  S     + QV A D D G N  + Y I +   + +  F +++ TG ++  + LDRE +  Y+ TV+A D G+P L  +  + + + DIND  PVF  VEY   I E+     K+  V ATD D G NA ISY  +           N    F I   +G I   + LD E +  +S+II A +  N  K++A T    +TVL+  DN P F   + N  +  +  K  GT +    AT  D  KN  ++Y+IV      +F +D T GI+    KI G
Sbjct:  192 INITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTG--VIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYF------IQLQKPLDRELVPFYNLTLNVTDKGVPSRSTL---GFVLIDVTDVNDNSPA--------FTSNAYTA----NISE-LAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQ--VDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASI-GATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEP-PGKLLQVTATDADEGTNAVISYDIIGG---------NNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGN--KYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPK--GTLVGRVYATTKD--KNGSISYAIVSGDPTNLFLVDSTGGII----KING 800

HSP 4 Score: 162.54 bits (410), Expect = 3.611e-40
Identity = 174/654 (26.61%), Postives = 294/654 (44.95%), Query Frame = 2 
Query:  890 IAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYD---RGHKSYKFIVIAKDSAPAPYELSS----SATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTV-HINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFI------LSASKSFDRENQQTEHVRITCRD--NGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKP----SYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKL-RLTVRVCDSGLPQKCSEDLMII 2785
            +A D+D G+N  + +Y  P  ++   F +       I   +  +    K  +++ + A D G P  S+++ V + + D ND+R  F+ N F    AV E +S   ++  + A   D  +   I Y +  S        F +D  +G++  +  LD +   +   S  +I+ A+    A Y  ++     A V + V D+ND  P         F    Y  TV  +++P       S +  I+  DADE D +        K  + L+S     K FI      L  SK+ DRE   + ++ +   D  N    ++  I I V D ND  P F    +  N+ E+    +  I  + A DKD+G+N  ++Y+I N      A F ++S TG++ +   LD E    Y +T+ A D G   L+ T N+ + V D+ND  P+F T      + E+ +    VG   A+DRD G NA I++         S++     + F +   + EI   + +D ET P    S+ +++ A +  +P K S   S T+ V D NDN+P F +P   +  S          +    A D D N N ++TYSI+   + Y FNL  ++G L +  +I     + +LT++  D G P + ++ ++ +
Sbjct:  969 VAVDQDSGKNGQL-FYSIPQGNEEGLFGIFPGGKLYI---RKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFR--FAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISS-----ESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAE----AMYNDTTIKRDKAIVIVTVTDLNDNAPV--------FSRAVYAITVSELSLP------GSPVFRIKAMDADEGDNA--------KFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVI-NLNASDKDIGQNGLIKYSISNGNLA--AMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAF---------SMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSP-KLSTRKSITVQVTDENDNSPGFVSPPAAAAGS-------SLNVMTITAEDPDRNSNGKVTYSIISGNNGY-FNLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQTVVSV 1564

HSP 5 Score: 140.198 bits (352), Expect = 2.696e-33
Identity = 152/622 (24.44%), Postives = 277/622 (44.53%), Query Frame = 2 
Query:  653 KTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNT-YRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLN-FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRE----NQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRE-TKPSYSIIIEAINVVNPRKFSATVSATITVLDCN 2488
            ++G    + R+DRE L  +      +     ++ +T  +++   +   + D+NDN P++   V  +   E +   S    I A D D G+NA  K++   +    ++ F + +S   L L+   D   ET   +N+ + A D     L ST  +++TV D ND RP F ++ +  N  + E   + ++++ + A DKD  QNG I Y I       +   F ++S TG L + K LD++   + Y+  + A+D    P  LSS+  V + V DVND  P   ++ T P         V + + EN+N     +      D D    + I  S+ ++   +  S +N     I + + + D E     + +  + +   D G  K    K+I + VTD+NDN P F            +  + ++  + A D D   N ++ Y+II+    ++  F +   TG++ +   +  +    Y +T+ A D G+PS      + +  E      P F + +Y+  + E+    + V  V A       N  I Y+  SD+         +   F++ K +G +  T  +DRE    S+++++ A++   P   +++ + TITV D N
Sbjct: 1101 RSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNA--KFFYSLVSGTGMDKFFINSSTGELHLSKTLD--RETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVN--ITEDALIGSLVINLNASDKDIGQNGLIKYSISNGN---LAAMFDVESATGRLIVAKSLDFET-TQLYELTITAQDHGLIP--LSSTVNVTVNVLDVNDNAP---LFPTQP---------VTLTVRENVN-TGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFS-VNSATCEITTIA-AIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSP-----PAAAAGSSLNVMTITAEDPDRNSNGKVTYSIIS---GNNGYFNLHPSTGQLQMIHQI-PDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDS---------SKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677

HSP 6 Score: 113.62 bits (283), Expect = 2.995e-25
Identity = 126/470 (26.81%), Postives = 204/470 (43.40%), Query Frame = 2 
Query: 1439 TVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFID---CSLDNKESFRLISDINKVKSFILSASKS-FDRENQQTEHVRITCRDNGKNENSKNIIINVT--DKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEY-------RFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGE---IMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSG-LPQKCSEDLMIIV 2788
            +V++QV D+ND  P+    F T + + R   ++ +N    +N            D D  +   +D    S DN  +F L +      S +   +K   DRE      + IT  D G        +IN+T  D+ND+ P F    +  ++ ENT      I +V A D+D G N +++Y I     +S++ F +DS TG +     LD E ++ Y   VIA D G PS      + I V D ND  P  + + Y       +    E++ +N+ +  +  TD+D   N++             L  TN  ++   K +      I +   LDRE  P Y++ +   +   P + S      I V D NDN+P FT+  N    +I      G+ +    ATD DE  N  ++YSI    D   F +D+ SG++  AK +  E    + +T+   D G  P+  S  + + +
Sbjct:   80 SVQVQVDDINDNEPR----FPTLYYTLRIRESMDVNTTNPIN---------TATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTK-PGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLK-ITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTE-----------LKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSR-STLGFVLIDVTDVNDNSPAFTS--NAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTI 520

HSP 7 Score: 113.62 bits (283), Expect = 3.732e-25
Identity = 115/382 (30.10%), Postives = 169/382 (44.24%), Query Frame = 2 
Query: 1697 ILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSF---TGK---MYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGV----VQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFT---APINNSLISIDTEKS-IGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKL----RLTVRVCDSGLPQKCSEDLMII 2785
            ++S +   DRE   T  + +  R    +    ++ + V D NDN P+F    +   + E+      +     A D D G N  + YTI      + A F + +    TG    +    PLDRE  D Y + + A D+G P+L G   I I + D ND  PVF    Y   I E    N+K GV    V A DRD G N  I Y    DA      ++N+   F +   +G I     LD E K SY+  + A +   P K +   + TI VLD NDN+P+      P +N   +I +E S I T IA    TD D N N++    I    D   F +++  G  F+  +    R+L     LT+ V D G+P + +   ++I
Sbjct:   50 VISTTARIDRET--TTQISLQLRTLNPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINT-ATDPDAGNNGTVDYTI--ASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAE----NTKPGVSILRVSAADRDSGSNGDIKYAIDWDAI-----QSNSI--FDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSK-NDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFL-GFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLI 413

HSP 8 Score: 73.559 bits (179), Expect = 5.936e-13
Identity = 72/283 (25.44%), Postives = 121/283 (42.76%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQ-SIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYET----KRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKL 1339
            ITE+  IG+ +  ++   +D  ++      I + N +    ++  TG   + K +D ET     L    QD   +               V++   +LD+NDN P++PT  V L   E+      +    A D+D G NA I + +   Y    +     +     +T    +D ET    +  F + ++A D+G P LS+  ++ V V D NDN P F+     P  A   + +V    + +TA D D   NG++ Y I      +    F L   TG+L++
Sbjct: 1273 ITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIP----------LSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSM---YSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVS---PPAAAAGSSLNV----MTITAEDPDRNSNGKVTYSIISGNNGY----FNLHPSTGQLQM 1531
[Close]
BLAST of Protocadherin-h vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0])

HSP 1 Score: 245.358 bits (625), Expect = 8.560e-66
Identity = 216/775 (27.87%), Postives = 360/775 (46.45%), Query Frame = 2 
Query:  500 TMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNT-----YRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAY-DKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQ--AVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLR--LTVRVCDSGLPQKCSEDLMII 2785
            T  + F I+E+ P GT + +++   RD   +      I   N      +  ++G+  ++  +DRET          + S  L+ K +      +     +   +LD+NDN P +  ++      E     S  L +   DKD G N  I   L     DN  F ++++   L  TP   +DYET   + +T+ A D G P  S+T  VK+T+I++NDN P F+     P Q  ++ E  ++   ++K+ A D D      + + I   +       F +D  +G + + K LD +    +Y  +V A ++      + ++AT  I+V DVND  P  N           Y  ++H N+P         +A +   D DE + + +   L   ++ +   ++N     + +  +  DRE+Q +  +R+T  D+GK   S    I + + D NDN P+F+  K+   V ENT+    +I +V A D D G N  + Y+II+    +   FRIDS TG++ +   +DRE    YN+T+ A D G P    T  + I V D ND  P+F + E  + I E  S+ S+V VV ATDRD G NA++          YS+ R +    F I   +G + +  +++RET P+Y++ I A +  +P   ++    T+ V D NDN P F +   + + S+    +  T +    A D+D   NA L YSI+   D   F ++ TSG++     ++   K +  L V   DS    K +  + +I
Sbjct:  791 TGPSRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRET----------IPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDN--FTIDSTGFVLSKTP---LDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVS----PAQVTSIPEDVAINTHVVKLNATDSDGTP---LTFDI---VEGNAGSSFKIDQSSGLISVAKRLDRET-TANYTLVVRATETGSQGESVYNNAT--IRVLDVNDNAPVFN--------PGSYAKSLHENLPIGQT-----VAKVTATDRDEGENAKVTYELSVGDTSKF--EVNPATGLV-TTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTA-NGSNILRVLASDPDAGANGRVTYSIISGNHGN--AFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVF---------YSIVRGDT-SAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSP-MMTSDKELTVVVNDVNDNPPVFNS--QSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVI 1505

HSP 2 Score: 244.588 bits (623), Expect = 1.570e-65
Identity = 222/737 (30.12%), Postives = 348/737 (47.22%), Query Frame = 2 
Query:  611 IGDPNFSECISIQDKTG-MTKIKKRIDRE-------TLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFID-----CSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFA-HKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLR--LTVRVCDSGLPQKCS 2767
            I D N     +I   TG +T   ++ DRE       T+ A +   +C K   ++              ++ D NDN P +P N       E+T    + +  A D+D G NA I Y L     +    N +  E R + TP   +D+ETK  + + I A D G+    +T    +TV D+NDN P F  +V+     VYE  +V +I+ ++TA+D D   N R++Y    S+       F +DS  G ++ K   D +    SY+  + A+D   +P   S  ATVEI++ DVND  P         F S +Y  +V  ++           A + +  +D+D+ +  D      S +   +F L        + +++ S+S D E + +  + ++  D G     ++ +++INV D NDNPP F+   +   V ENT        QV A D+D   N  L + II  +   D  F ID  TG + I    D E +  Y++TV A D+G P    T  + I +ED+ND  PVF    Y  QIPE   + S V  V ATD D G   R+ Y  +S          N    F I  +SG I ++S+LDRET PSYS+ +EA +  +    S++   TI + D NDN+P F  P    +  +    S G +I    ATDAD++ N ++ Y++   TD  VF+++ ++G++ L  +++  +K +  +TV   D G P + S
Sbjct:    3 IMDGNDQGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVV------------IDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFS-GENKFMMNSKTGEIRTV-TP---LDHETKDSYTMRISAFD-GK---HTTFVPLITVDDVNDNAPFFALSVYK--TGVYEDVAVGSIVRQLTAVDLDVGINARLSY----SLVSGDTSYFTVDSQ-GVIRTKGAFDRET-KASYQVALRAQDGG-SPSR-SGQATVEIEILDVNDNRPV--------FSSAQYTASVDEDVAIGA-------AMVTVTASDKDNGNNADLRYSFTSGNTNHAFTL-----DAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT----QVSATDRDSSTNGALVFGII--KGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISG---------NVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGS-TSRSSSTRVTIALQDINDNSPIFQGPY---VFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTD--VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSS 667

HSP 3 Score: 229.95 bits (585), Expect = 6.616e-61
Identity = 216/722 (29.92%), Postives = 323/722 (44.74%), Query Frame = 2 
Query:  650 DKTGMTKIKKRIDRET-----LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKD-SAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINK------VKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKN--IIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKC 2764
            D  G+ + K   DRET     +    QDG              R     +E EILD+NDNRP++ +        E     +  + + A DKD G NA ++Y      + N  F L+      ++T    +D+E +  + + +   DRG P L+ T ++ + V DINDN P F  + +     V E T       +V+A D+DS  NG + + I       +   F +D  TG + + K  DY+   + Y   V A+D   P  Y+   +A V I + DVND  P         F    Y+      IPE+     S +  +   D D   +  ++        +RLIS   K        S  +  S   DRE   +  +++  RD G    S +  + I + D NDN P F   + F V+E++S  ++ IGQV A D D   N ++RY + +    +D  F I++ TG + +   LD E++  Y +TV A D G PS +    + ++V+D+ND PP F    Y   + E+ +    V  V ATD D G N +ISY  LS          N    F + + +GEI     LDRET  SYS+ I A +    R F A  +  I++ D NDN P FT P   S  +I  +   GT +    ATD D   N  +TY+I+       F LD  SGIL +   +  E      L V+  D+G PQ+ 
Sbjct:  218 DSQGVIRTKGAFDRETKASYQVALRAQDGGSPS----------RSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTS-GNTNHAFTLDAVTG--VVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQ--SRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGV---FTIDGSTGIISIAKSPDYENKTR-YDLTVQARDRGVPVKYD---TAQVTIFIEDVNDHSPV--------FSPSNYSK----QIPEST-VIGSTVVTVTATDLDSGPRGRLE--------YRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFRVSESSSPGHQ-IGQVAATDADDSSNGDVRYALSD---NTDV-FSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSG---------NENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVR-FMAATTVNISIADENDNQPTFTGP---SRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQS 875

HSP 4 Score: 187.578 bits (475), Expect = 8.404e-48
Identity = 216/765 (28.24%), Postives = 351/765 (45.88%), Query Frame = 2 
Query:  527 EEEPIGTDLFEVSKFLRDK---IKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL---DNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLI--SIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVR--VCDSGLPQKCSEDLMII 2785
            E  PIG  + +V+   RD+    K  Y  +V GD +  E   +   TG+   K+ +DRE     +Q    ++   +      +     +   I D+NDN P +  +   L   E+T   S I   +A D D G N  + Y +    H N  F ++++  R+ +     VD E    +N+TI A+D G P   ST  V +TV D NDN P F  N    +  + E  S+ + +  VTA D+D   N ++ Y    S+ +     F +++  G L +KK ++ +    +Y   + A D   +P  ++S   + + V DVND  P  N        S  Y G+V  N     + Q + +  +  +D+D    + +  S+   ++++ F+    IN     I++ +   D E +    + +T  D+ K     N+ I V + ND  P F  + +  +V EN S  +  + +V A D+D      L Y+I  V  +   +F ID  +G +     LDRE    Y I V   D G P L+    + I + D ND  P F++  Y   I E+++ +S    + ATD D G NARI+Y+         L R +AF    I   SG I +   LDRE K +Y + I+A +   P + S+ ++  +TV+D ND+ P     IN+S +  S+   +   T +    A+DAD   NAELT+S++      VF LD T+G +     ++  ++   T+R  V D G P   S   +II
Sbjct: 1110 ENLPIGQTVAKVTATDRDEGENAKVTYELSV-GDTSKFE---VNPATGLVTTKRPLDRE-----DQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNA-FRIDSTTGRITVVGV--VDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASN--ETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFY----SIVRGDTSAFAINAMNGVLTVKKEINRET-VPTYTLTIRASDRG-SPM-MTSDKELTVVVNDVNDNPPVFN--------SQSYIGSVREN-----SAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFK----INSTSGVIMTTTP-LDFEEKSQYGLEVTATDS-KYTAKTNVTIRVINLNDITPAFTQQNYTASVREN-SPTSTSVVKVSASDRD--SFGSLSYSI--VGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYN---------LSRNDAF---MIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASS-ITIRVTVIDINDHRPL----INSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVII 1812

HSP 5 Score: 166.392 bits (420), Expect = 2.706e-41
Identity = 181/682 (26.54%), Postives = 308/682 (45.16%), Query Frame = 2 
Query:  488 KYSQTMKNYFRITEEEPIGTDLFEVSKFLRDK-IKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEF---EILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSL-DNKESFRLISDINKVKSFILSASKSFDRE--NQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKF 2506
            ++SQ+ K    +TE    G+++  V     D        +++I   N      I   TG   +   +DRE L + N        + +  K++     V   F    + D NDN P++ +N       E     S + +  A D+D G NA + Y +  +  D   F + N+ N  +LT K +++ ET   + +TI A DRG P+++S   + V V D+NDN P F    +    +V E ++    +L V A D D   N  + Y I   +      +F ++S +G +    PLD++   + Y   V A DS     + ++   V I+V ++ND  P         F    Y  +V  N P +        + +++  +D D    +  S+   K+S +   D    +S I+S +   DRE  +     VR+T   N    N   + I + D+NDN PKF +  ++ ++ EN++  +    ++ A D D G NA + Y +     R+DA F I + +G + +  PLDRE +  Y++ + A D G P    +  I + V DIND  P+  +   R  + E+    + V  + A+D D G NA +++  LS+      H++     F +   +G+I     LDRE +  Y++ I   +  NP   S+     I V+D +DN P+F
Sbjct: 1202 QFSQS-KYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISG-NHGNAFRIDSTTGRITVVGVVDREALASYN--------LTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSI--VRGDTSAFAI-NAMNG-VLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYI--GSVRENSAQSTSVLTVAADDSDVGANAVLRYSI---ISGNDEKRFKINSTSGVIMTTTPLDFEEKSQ-YGLEVTATDS-----KYTAKTNVTIRVINLNDITPA--------FTQQNYTASVRENSPTST-------SVVKVSASDRDSFGSLSYSIVGGKDSDKFSID---QRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSF-KLAATDADEGTNARITYNL----SRNDA-FMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNE-----HKS----VFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNP-SLSSVADVIIDVIDEDDNCPRF 1824
[Close]
BLAST of Protocadherin-h vs. Ensembl Nematostella
Match: EDO30364 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T100])

HSP 1 Score: 229.18 bits (583), Expect = 1.095e-60
Identity = 219/762 (28.74%), Postives = 355/762 (46.59%), Query Frame = 2 
Query:  518 RITEEEPIGTDLFEVSKFLRDKIKSEYRFTVI-GDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMW--PTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMI----TSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCS 2767
            +++E   IGT++ +++   +D I     +++  GDP      +I + TG  +    +DRE +       +   S+ L+       + + +  ++ D+NDN P++  P   +E  + ES E  SI    A D DIG+NA + Y    I  +  ++   N+   +I      +D E + +FN TI A D G P  SST +V + ++DINDN P F    ++    V E       +L VTA DKD   N +++Y     +   +  +F +D DTG +  ++PL+ +    SY   + A DSA    E   +  V I V D ND +PQ        F    Y  +V  ++          +  +   D D +D + +   + +  +  + S +N+    I+S + + DRE   +  + IT +D+G    E++ +++I + D NDN P F+   +N  + E+   + + + QV A D D G N +  Y I      +D  F ID+ TG + I A LD E+   YN+TV A D G P LTG   + I V D++D  PVF    Y  ++ E+ +    V  V ATD D   + +  Y        Y +   N    F I + SG I +    +  L+RET   Y + + AI+ VN  +  + V A ITVLD NDNAP+F +      +  DT       I   +A D DE ++ E+ ++IV   +  VF +D  +G+L   + +  E      L V   D G P   S
Sbjct: 1200 KLSENASIGTNVTKITALDKD-IGDTISYSIANGDP--YGLFTIDNVTGEIRTVAELDRENVTQYELFVQAKDSVNLV------SDLLKVVVQVEDVNDNPPVFSMPGYTIEY-WEESPEGTSILQVKAIDADIGDNAAVLY---SIVENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYY--AYVRENQPAGTPVLVVTASDKDVGTNAKLSYV----LSGVLYTRFAIDPDTGNITTREPLNREE-TGSYTLTLRAVDSAIRARE--GTTRVIITVTDANDHVPQ--------FTQSGYAFSVREDVKVGHT-----VGRVATTDEDINDNARVRYYISSGNTSLMFS-VNETTG-IISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDVNDNKPLFSKSVYNVTLRESVFLKTQ-VVQVIATDPDEGANGQFTYKI--TAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTPPLTGACFVEIHVSDVDDNAPVFHKPRYSAELYENVTRGHHVITVNATDIDAEASHKRVY--------YRIESGNTDSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISRVNLTEQKSLVPAVITVLDVNDNAPRFDSESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTIVSGNENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEPALSS 1913

HSP 2 Score: 189.504 bits (480), Expect = 2.209e-48
Identity = 194/659 (29.44%), Postives = 293/659 (44.46%), Query Frame = 2 
Query:  803 INDNRPMWPTNVVELLYPESTEKQ-SIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNIT---IVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG--KNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            IND  P++  ++  +   ES  +   I    A D+D G NA+I Y           F +  S   +I+    D +++     N+T   IVA  +      +T  V +TV D+ D++P F  N       + E  S+   + K+TA+DKD      I+Y I    P  +   F +D+ TGE++    LD +   + Y+  V AKDS     +L     V +QV DVND  P     F+ P  +  Y            +P+ + +  ++  DAD  D + +  S+   E+      +N +   I   S   DRE ++  +  I   D+G     ++ ++ I + D NDN P F +   +            +  V A DKD+G NA+L Y +  V      RF ID  TG +    PL+REE   Y +T+ AVD    +  GT  ++I V D ND  P F    Y F + ED  V   VG V  TD DI  NAR+ Y+  S          N    F + + +G I  TS LDRE   SY++II A +   P    +  S  IT+ D NDN P F+  + N  +++     + T++    ATD DE  N + TY I       VF +D  +G++ +  K+  E      LTV   D G P
Sbjct: 1082 INDESPLFEKSMYYVNVSESASRGIVIGRVTATDRDEGINAIIFYSSNGA---EAKFYVSRSTGDIIVDSPLDREFKNVYILNVTAANIVAGAQ-----DTTTQVHITVTDVIDDKPYF--NSSSLTVKLSENASIGTNVTKITALDKDIGDT--ISYSIANGDPYGL---FTIDNVTGEIRTVAELDRENVTQ-YELFVQAKDSVNLVSDL---LKVVVQVEDVNDNPP----VFSMPGYTIEY---------WEESPEGTSILQVKAIDADIGDNAAVLYSI--VENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVLY---TRFAIDPDTGNITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYYISSG---------NTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIP-ALESNTSVMITIEDVNDNKPLFSKSVYN--VTLRESVFLKTQVVQVIATDPDEGANGQFTYKITAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTP 1691

HSP 3 Score: 169.859 bits (429), Expect = 1.986e-42
Identity = 169/653 (25.88%), Postives = 304/653 (46.55%), Query Frame = 2 
Query:  512 YFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVD-LEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNII---INVTDKNDNPPKF-AHKFNFNVNENTS-YRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFET------VEYR--FQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN 2425
            Y  + E +P GT +  V+   +D + +  + + +         +I   TG    ++ ++RE      + G    ++R +      +EG   +   + D ND+ P +  +       E  +   ++      D+DI +NA ++YY   I   N +     +E   I++    +D E    + + I A+D G P L S  +V +T+ D+NDN+P F ++V+  N  + E+  ++  +++V A D D   NG+  Y I         D F++D++TG + +K  LDY++    Y   V A+D    P  L+ +  VEI V+DV+D  P     F  P    RY+  ++ N+    +    +   I  E + +  + +      N +S  LI + + V +   + S   +RE      +++           K+++   I V D NDN P+F +  +  +V E+T    +  I  V+A D D G++ E+ +TI  V    +  F++D+ TG +    PLDRE+   Y++ V+A D+GEP+L+ +  + I V D+ND  P+ +T       E R  F + E+      VGVV A D D  KN  + Y+++++        T   + F + + SGE+     LDRE    + + ++A N
Sbjct: 1405 YAYVRENQPAGTPVLVVTASDKD-VGTNAKLSYVLSGVLYTRFAIDPDTGNITTREPLNRE------ETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYY---ISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDVNDNKPLFSKSVY--NVTLRESVFLKTQVVQVIATDPDEGANGQFTYKITAGDTD---DVFYIDANTGLITIKAKLDYEK-TSLYNLTVSAQDLGTPP--LTGACFVEIHVSDVDDNAP----VFHKP----RYSAELYENVTRGHHVITVNATDIDAEASHK--RVYYRIESGNTDSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISRVNLTEQKSLVPAVITVLDVNDNAPRFDSESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTI--VSGNENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEPALSSSVTVNITVLDMNDNLPILQTPMDVLIPERRTTFSVKENLDAGVPVGVVAAQDLDT-KN--LIYYYITN--------TEEQKYFILNETSGELRTRITLDREDSSVHYLYVKASN 2016

HSP 4 Score: 153.295 bits (386), Expect = 2.350e-37
Identity = 142/543 (26.15%), Postives = 248/543 (45.67%), Query Frame = 2 
Query: 1085 LSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDK---SFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNI--IINVTDKNDNPPKFAHKFNF--NVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYID-APLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFE------TVEYRFQIPED-ASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYS----------IIIEAINVVNP---RKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSI 2629
             S+  +V +T+I++NDN+P F ++ +  N  + E  +    I  +TA D D    G + Y +      +    F +++D G +   + LDYD   + Y+F ++ KD     Y+  + ATV + + DVND  P+   +   P+ SD         I EN+ P  + +  +   D D  +    SF   + D+   F +        S +++ ++  DRE   T  + ++  D+G +   K++   +NV D+NDN P+         N++E        +  + A+D D G N +L Y++       D+RF ++S TG++ I    LDRE +D Y++ +   D G P  T +  + + + D+ND  P F+         Y   + E   ++N  +  + ATD D   N +++Y    D   +          F++   +GE+ +  +LDRE+ P  S          + I A +   P   RK SATV  +ITV D NDN+P+F +   N    +      G+ +    ATD D     ++ Y+I
Sbjct:  369 FSANASVTLTLINVNDNKPMFAKSSY--NYTMDEEITPGTHIADITATDADLGTFGALTYELRGGQAAY----FSVNADNGTISAAQILDYDT-LRQYQFSLVVKDGG-GFYQEIAIATVTVTLQDVNDNDPE---FTGMPYTSD---------IAENL-PAGTIVFQVTATDKDSGENGRLSFNISAGDDGGHFSING------SGLVTTARELDRETIATYTLTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYSM----SGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLSGDEHGF----------FRLDPVTGELSVRKELDRES-PQMSRNAQGDGRFLLDITATDQATPISDRK-SATVRVSITVRDTNDNSPQFQS--QNYETRLSEAARPGSNVIQVSATDQDLEYKGKVIYNI 866

HSP 5 Score: 150.599 bits (379), Expect = 2.008e-36
Identity = 187/718 (26.04%), Postives = 299/718 (41.64%), Query Frame = 2 
Query:  656 TGMTKIKKRIDRET--LCADNQ-DGKCVKSIRLIFKNT----YRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNF-NVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLA-----KKIEGFRKLRLTVRVCDSGLPQKCS 2767
            TG   ++K +DRE+  +  + Q DG+ +  I    + T     +   V +   + D NDN P + +   E    E+    S  + + A D+D+     + Y +            +  ENR     K    Y   +  N  +  E +          V + V D+NDN P F Q+ +  +  V E +     +L+V A D+D   NG+I Y +         D F +++ TGE+ +   +D +  H ++   V A+D    P    + A V I V D ND  PQ +  FT       Y G +  N P                                     + S I  V    +S+S    R + +     +T R+             +T  ND  P F     + NV+E+ S R   IG+V A D+D G NA + Y+       ++A+F +   TG + +D+PLDRE ++ Y + V A +    +   T  + I V D+ D  P F +     ++ E+AS+ + V  + A D+DIG           D   YS+   + +  F I   +GEI   ++LDRE    Y + ++A + VN    S  +   + V D NDN P F+ P     I    E   GT I   +A DAD   NA + YSIV     YV  ++  +G++ L      +++E +     T+R  DSG+P K S
Sbjct:  764 TGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQSQNYETRLSEAARPGSNVIQVSATDQDLEYKGKVIYNIT-----------DGDENRKCEVEKLVRHYNWHKK-NCVLCKESK---CSVERTYVVIYVDDVNDNDPVFNQSKYAAD--VLENSPTGTPVLRVHASDRDQGANGKITYKLTNGNKD---DAFSINNVTGEITVAGVIDREAVH-TFVLTVQAEDQG-EPSSRKTFAEVVITVKDENDNFPQFS--FT------GYEGEIAENSP-------------------------------------VGSTITMVPDQKISSSTLRPRSSPRAPAALLTAREKRP----------ITLINDESPLFEKSMYYVNVSESAS-RGIVIGRVTATDRDEGINAIIFYS----SNGAEAKFYVSRSTGDIIVDSPLDREFKNVYILNVTAANIVAGAQDTTTQVHITVTDVIDDKPYFNSSSLTVKLSENASIGTNVTKITALDKDIG-----------DTISYSIANGDPYGLFTIDNVTGEIRTVAELDRENVTQYELFVQAKDSVN--LVSDLLKVVVQVEDVNDNPPVFSMP--GYTIEYWEESPEGTSILQVKAIDADIGDNAAVLYSIVENVTDYV-TVNAITGVISLGSSQLDREVEEY--FNFTIRATDSGVPSKSS 1381

HSP 6 Score: 138.272 bits (347), Expect = 1.111e-32
Identity = 161/596 (27.01%), Postives = 260/596 (43.62%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIK-SEYRFTV-IGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWP------TNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQ--AVYETT------SVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYD--------RGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGT-GNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVV 2227
            I E  P GT +F+V+   +D  +     F +  GD      I   + +G+    + +DRET+         +         + R + V L   +LD NDN P         TN+ E     +    SI    A D D G N  + Y +      +  F L ++  RL ++P   +D E K  +++ I   D G P  +++  V VT++D+NDN P F  N   P Q  A Y  T      ++   ++ + A D D++ NG++ Y +      F R    LD  TGEL ++K LD +        +G   +   + A D A P     S++  V I V D ND  PQ        F S  Y       + E   P  S++  +   D D + K  +  ++ + +  R      K +   L    ++ ++N       + C+++  +     ++I V D NDN P F   K+  +V EN S     + +V A D+D G N ++ Y + N     D  F I++ TG++ +   +DRE    + +TV A DQGEPS   T   ++I V+D ND  P F    Y  +I E++ V S + +V
Sbjct:  503 IAENLPAGTIVFQVTATDKDSGENGRLSFNISAGDDGGHFSI---NGSGLVTTARELDRETIAT-----YTLTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIA---AVDPDAGSNGQLTYSMS---GGDSRFTLNSATGRLQISPT-GLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPN---PAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLSGDEHGFFR----LDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQ--------FQSQNY----ETRLSEAARPG-SNVIQVSATDQDLEYKGKVIYNITDGDENR------KCEVEKLVRHYNWHKKNC------VLCKESKCSVERTYVVIYVDDVNDNDPVFNQSKYAADVLEN-SPTGTPVLRVHASDRDQGANGKITYKLTN--GNKDDAFSINNVTGEITVAGVIDREAVHTFVLTVQAEDQGEPSSRKTFAEVVITVKDENDNFPQFSFTGYEGEIAENSPVGSTITMV 1048

HSP 7 Score: 129.413 bits (324), Expect = 5.792e-30
Identity = 193/797 (24.22%), Postives = 340/797 (42.66%), Query Frame = 2 
Query:  410 NFNFFEIFLSIIKTMNAIGLLLFILIKYSQ--------TMKNY-FRITEEEPIGTDLFEVSKFLRD-KIKSEYRFTVIGDPNFSECISIQDKTGMTKI-KKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEG-VDLEFEILDINDNRPMWP-TNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSA-PAPYELSSSATVEIQVADVNDEIPQIN--IYFTT----PFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHK--FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAP----LDREEQDHYNITVIAVDQGEPSLTGTGNIL---ILVEDINDMPPVFETVEYRFQIPEDAS--VNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPIN------NSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGIL 2683
            N   +E+F+    ++N +  LL ++++           +M  Y     EE P GT + +V     D    +   ++++   N ++ +++   TG+  +   ++DRE     N       +IR        K     +  +++DINDN P++  T+    +         + +  A DKD+G NA + Y L  + +     + +       +T +  ++ E    + +T+ A D        T  V +TV D ND+ PQF Q+ +    +V E   V   + +V   D+D   N R+ YYI       +   F ++  TG +     LD ++ + SY  I+ AKD   PA   L S+ +V I + DVND  P  +  +Y  T     F+  +    +  +  E  N Q +     +I   D DD  +ID +                 + +++     D E     ++ ++ +D G      +  + I+V+D +DN P F HK  ++  + EN + R   +  V A D D   + +  Y  I     +D+ F I   +G + ++      L+RE    Y + V A+ +   +LT   +++   I V D+ND  P F++  Y   + ED     ++ +  V+A D D G++  I +  +S          N    FQ+   +G +  T  LDRE    YS+++ A +   P   S++V+  ITVLD NDN P    P++       +  S+      G  + +  A D D  KN  + Y I    +   F L+ TSG L
Sbjct: 1257 NVTQYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMPGYTIEYWEESPEGTSILQVKAIDADIGDNAAVLYSIV--ENVTDYVTVNAITGVISLGSSQLDREVEEYFN------FTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVLYTRFAIDPDTGN----ITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYA--FSVREDVKVGHTVGRVATTDEDINDNARVRYYISSGNTSLM---FSVNETTGIISTTSTLDREQ-NASYTLIITAKDHGIPA---LESNTSVMITIEDVNDNKPLFSKSVYNVTLRESVFLKTQVVQVIATDPDEGANGQFT----YKITAGDTDDVFYIDAN-----------------TGLITIKAKLDYEKTSLYNLTVSAQDLGTPPLTGACFVEIHVSDVDDNAPVF-HKPRYSAELYENVT-RGHHVITVNATDIDAEASHKRVYYRIE-SGNTDSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISR--VNLTEQKSLVPAVITVLDVNDNAPRFDSESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTIVSG---------NENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEP-ALSSSVTVNITVLDMNDNLPILQTPMDVLIPERRTTFSVKENLDAGVPVGVVAAQDLD-TKNL-IYYYITNTEEQKYFILNETSGEL 1994

HSP 8 Score: 120.553 bits (301), Expect = 2.561e-27
Identity = 170/689 (24.67%), Postives = 290/689 (42.09%), Query Frame = 2 
Query:  800 DINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDS-APAPYELSSSATV---------------EIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQ-QSDLAHIQIEDADE---DDKS---FIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGE-PSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLS--DAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAIN-VVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFR---ATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGF-RKLR----LTVRVCDSGLP 2755
            D NDN P++          E+    +  L I A D D G N+ ++Y           F   NS N   LT    +D+E  R + + ++AED G P L S   V + V DI+D  P+F+Q+ +   + + E T + + ++ V A D D   N  I Y I       +   F +DS+TG + +   +D     K+  F +  K S  P P   ++   V                + + DV +++           VSD+   T       + NP  +  L H+   D+D+   D  S   +I+ +LD ++      D  +       +   +    ++ + V      + K   + ++ + + + NDN P FA   +N+ ++E  +     I  + A D DLG    L Y +   Q    A F +++  G +     LD +    Y  +++  D G          + + ++D+ND  P F  + Y   I E+    + V  V ATD+D G+N R+S++  +  D   +S++             SG +    +LDRET  +Y++ + A +  V+ R     V  T+ VLD NDN P+ T  +    I+ +  +  G    L     A D D   N +LTYS+        F L+  +G L ++    G  R+L+    L + V D+G P
Sbjct:   38 DYNDNAPVFTEQPYMAKIAENARVGTTILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGE-LTLGGPLDFEVARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYL--KEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNSDGV---FTIDSNTGVITVNGSID---AEKTDVFRITVKASEVPDPNSNTTVTVVVTVVDVNDNRPAFLQSVYIFDVREDVA-----LPGRVVSDQLQVT-----DGDKNPVFRRVLYHLVGADSDKFAIDPTSGTLYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYNYTMDEEIT-PGTHIADITATDADLGTFGALTYELRGGQA---AYFSVNADNGTISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIVFQVTATDKDSGENGRLSFNISAGDDGGHFSIN------------GSGLVTTARELDRETIATYTLTVSAYDHGVSSRH--KHVQLTVNVLDENDNTPQITDGLT---ITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYSMSGGDSR--FTLNSATGRLQISPT--GLDRELKDSYDLIINVTDNGSP 682

HSP 9 Score: 102.834 bits (255), Expect = 7.183e-22
Identity = 175/680 (25.74%), Postives = 296/680 (43.53%), Query Frame = 2 
Query:  788 FEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNV--FHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDR-----------------------GHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKES--FRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNG---KNENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSD-ARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDIND-MPPVFETVEYRFQIPEDASVNSK-VGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMIT-SKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSL----ISID-TEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIE 2704
             E+ DI+D  P +  +       E+T   S  + + A D D+G N  I Y +     D + F +++  N  ++T    +D E    F IT+ A +   P  ++T+ V VTV+D+NDNRP F+Q+V  F   + V     V +  L+VT  DK+     R+ Y++  +      D+F +D  +G L + K LDY++                       G    K +V  +      +  S++A+V + + +VND  P         F    YN T+     E + P  + +A I   DAD      +   L   ++  F + +D     +  +SA++  D +  +     +  +D G   +      + + + D NDN P+F    +  ++ EN       + QV A DKD G+N  L +   N+    D   F I+  +G +     LDRE    Y +TV A D G  S      + + V D ND  P + + +     I E A   +  +  + A D D G N +++Y             +    +F +   +G + I+ + LDRE K SY +II   +  +P   ++T +  +T+LD NDN P F      SL    I++D    +I   +    ATD D + N ++ YS+    +   F LD  +G L + K+++
Sbjct:  141 IEVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNSDGV-FTIDS--NTGVITVNGSIDAEKTDVFRITVKASEVPDPNSNTTVTVVVTVVDVNDNRPAFLQSVYIFDVREDVALPGRVVSDQLQVTDGDKNPVFR-RVLYHLVGAD----SDKFAIDPTSGTLYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKF--SANASVTLTLINVNDNKPM--------FAKSSYNYTMD----EEITP-GTHIADITATDADLGTFGALTYELRGGQAAYFSVNAD-----NGTISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLP-AGTIVFQVTATDKDSGENGRLSF---NISAGDDGGHFSING-SGLVTTARELDRETIATYTLTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYSM-----------SGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNST-TVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSL-SGDEHGFFRLDPVTGELSVRKELD 774

HSP 10 Score: 96.2857 bits (238), Expect = 6.372e-20
Identity = 90/321 (28.04%), Postives = 143/321 (44.55%), Query Frame = 2 
Query: 1784 NSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIAL----FRATDADENKN-AELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLT 2728
             SK   + V D NDN P F  + +   + EN       I ++ AID D G N++++Y   N        F ++S  G++ +  PLD E    Y + VIA D G P L     ++I V DI+DMPP F    Y  +I E+  + S V  V+A D D+G N  I Y  +S          N+   F I  ++G I +   +D E    + I ++A  V +P   +        V   ++  P F      S+   D  + +     +     + TD D+N     + Y +V A D   F +D TSG L++ K ++  +++  T
Sbjct:   28 GSKFFFLIVDDYNDNAPVFTEQPYMAKIAENARV-GTTILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGPLDFEVARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISG---------NSDGVFTIDSNTGVITVNGSIDAEKTDVFRITVKASEVPDPNSNTTVTVVVTVVDVNDNR-PAFL----QSVYIFDVREDVALPGRVVSDQLQVTDGDKNPVFRRVLYHLVGA-DSDKFAIDPTSGTLYINKTLDYEKQINFT 332

HSP 11 Score: 77.411 bits (189), Expect = 3.394e-14
Identity = 63/237 (26.58%), Postives = 105/237 (44.30%), Query Frame = 2 
Query: 2048 QDHYNITVIAVDQ---GEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRK--LRLTVRVCD 2743
            QD+Y  TV   D    G  +  G+    ++V+D ND  PVF    Y  +I E+A V + +  + A D D G N+++ Y F       S         F +   +GE+ +   LD E   SY +++ A ++  P K  +  +  I V D +D  P+F       L  I+    IG+ +    A D D   N  + Y I+      VF +D  +G++ +   I+  +    R+TV+  +
Sbjct:    6 QDNYEFTVYVEDDFNGGGLARRGSKFFFLIVDDYNDNAPVFTEQPYMAKIAENARVGTTILKISAIDADSGTNSQVQYKF-------SNATATQTPFFSLNSVNGELTLGGPLDFEVARSYMLVVIAEDLGVP-KLESRTTVIIEVTDISDMPPRFLQSF--YLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNSDGVFTIDSNTGVITVNGSIDAEKTDVFRITVKASE 232
[Close]
BLAST of Protocadherin-h vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4])

HSP 1 Score: 222.246 bits (565), Expect = 1.918e-58
Identity = 206/736 (27.99%), Postives = 329/736 (44.70%), Query Frame = 2 
Query:  590 SEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRE-----TLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTE-KQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNF---NLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINY-YIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSF-----IDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRI--TCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRV 2737
             E ++ ++     +   SI + +G   + K++DRE     TL    QD            N  R   V ++  +LD+ND  P +   V      E     Q +    A D D G N  +  + + +  +++NF   N  N E R+    K  +DYE    FN+ + A+D+G+P L +   V + +ID+NDN PQF+ +  H    + E  +V     +V A DKD   NG I + ++   +P      F ++ +TG + +K+ LD ++  K + F + A+D    P++   +A + I + D+ND  P+        F  + Y    H +I EN     S L   Q++  D D         I  S  +   FR    IN      LS + +++     T+HV +      +G   ++  + +NVTD N + P+F  + ++  V E+ S     +  V A D+D G NA++ Y+I  + P     F +D  TG +     LDRE+ D Y   V A D G P L     + I + D+ND  PVF    Y  ++ ED     +V  V A+D DIGKNA+I Y F S+         +    F I    G I     LDRET P Y + + A +   P    A+V   + + D  D+ P F  P+    +  DT     + +   +A   D +    + YSIVR   P VF+++  +G +    K+  E   + RLTVR 
Sbjct:  161 GEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQG----------NPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEV--FFEIVSGNDMNFFSINRINGEVRV----KQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSS--HFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLP------FSINENTGGISIKEELDREKVPK-FTFGIKARDKG-VPFK-EGTAQITITLLDINDNPPK--------FSQEEY----HTSIAENSRWGTSVL---QVKAIDPDSGPTNVVYSIVSSSGHDRCFR----INPQGLITLSCTLNYN-----TKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASL-GTSVLTVLATDRDTGSNAKISYSIATLVPE----FSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNG--------DGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPG-QASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPR--SPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRA 829

HSP 2 Score: 209.149 bits (531), Expect = 1.894e-54
Identity = 207/720 (28.75%), Postives = 319/720 (44.31%), Query Frame = 2 
Query:  641 SIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEG-------VDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCS-LDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGK--NENSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-VFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            SI   TG+   K+ +DRE L             R  F+      G       +DL   +LD+NDN P++  N+     PE        LA+ A D D G N  +KY +     DN  F++      + +  K  +D E    + + + A+D+G P  S+T+ VK+T++D+ND  PQF + V+  +  + E   V  ++  V A D D   NG + + I         + F ++   GE+++K+ LDY+     +  +V A+D    P+ L +  TV+I + DVND  PQ        FVS  +       IPEN    Q +   +Q  D D      I  S + N   F +  +   +     S  +  DRE        I  RD G    E +  I I + D NDNPPKF+  +++ ++ EN+ +    + QV+AID D G    + Y+I++     D  FRI+   G + +   L+   +  Y   V +V   +  L+ T  + + V D N   P F+   Y  ++ EDAS+ + V  V ATDRD G NA+ISY   +              +F + + +G I     LDRE   +Y   + A +   P +  A     I + D NDN P F  P   + +  D     G  +    A+DAD  KNA++ YS     D    F +D T GI+   K +  E   +  LTV   D G P
Sbjct:   72 SIDQITGVITTKRGLDREFL------------DRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKK--LDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVY--SATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDM---NFFSINRINGEVRVKQKLDYEM-IGVFNLLVTAQDKG-QPF-LYNQTTVDIALIDVNDNAPQ--------FVSSHF----QTMIPENYAVGQ-EFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGI-----SIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRW-GTSVLQVKAIDPDSGPT-NVVYSIVSSSGH-DRCFRINP-QGLITLSCTLNYNTKHVY---VFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIAT-----------LVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIP-QLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRP--GGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTP 730

HSP 3 Score: 189.889 bits (481), Expect = 1.616e-48
Identity = 200/742 (26.95%), Postives = 329/742 (44.34%), Query Frame = 2 
Query:  617 DPNFSECISIQDKTGMTKIKKRIDRETLCADN-----QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPES-TEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVK----SFILSASKSFDRENQQTEHVRITCRDNGKNE-NSKNII-INVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK-IEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 2800
            D NF    SI    G  ++K+++D E +   N     QD    K    ++  T       ++  ++D+NDN P + ++  + + PE+    Q      AYDKD G N  I +       ++L F++  +EN   ++ K ++D E    F   I A D+G P    T  + +T++DINDN P+F Q  +H   ++ E +     +L+V AID DS     +   +  S      D+ F  +  G + L   L+Y+  H  Y F V A D       LSS+A V + V D N   P+        F    Y+  V     E+ +   S L    +   D D  S      + K S+ + + + +      + ++  + S DRE   T    +T  D+G  +  +K+ + I++ D NDN P F    +   V E+     R I +V A D D+GKNA++ Y+  +        F IDS  G +    PLDRE    Y +TV+A DQG P    +  + +++ED+ D PP+FE   Y   +PED    S V  V+A  +D+                YS+ R N+ + F I  ++G I    KLD ET+  Y + + A   ++P  F    +  + + D NDN P   A   N    I+ ++      A ++    D + + +LT+ ++         L+ TSG L + KK I+  +   + + V D       +  +M+   TT+
Sbjct:  278 DMNF---FSINRINGEVRVKQKLDYEMIGVFNLLVTAQD----KGQPFLYNQT------TVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFM---QNDLPFSI--NENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYH--TSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSG----HDRCFRINPQGLITLSCTLNYNTKH-VYVFSVSASDGM-----LSSTALVYVNVTDSNTHAPE--------FKRRSYSAEVK----EDASLGTSVLT---VLATDRDTGS------NAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVI-EVSASDADIGKNAQIIYSFAS-NGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPET---------GMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRA--TLSP--FFTETTVMVYLKDINDNTPVLEAFHMN----INVQEGKVPPEARYKIPAYDPDVSDKLTFKVMEGNAKEWVTLNATSGELSVNKKLIQASKPANIKIAVTDGLRTASATGSIMMTSVTTE 949

HSP 4 Score: 187.963 bits (476), Expect = 7.290e-48
Identity = 180/633 (28.44%), Postives = 291/633 (45.97%), Query Frame = 2 
Query:  893 AYDKDIGENAMIKYYLQPIYHDNLN----FNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADE--DDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQ 2758
            A D D G N MI+Y + P    NL     F+++     +      D ++  + FF +   AED G P L   +++ + V+D+NDN P F +N++  +  + E  S+   +L V A D DS  NG + Y I  S        F +   +G + + K LD ++   +Y   V A+D    P   S++ TV+I + DVND  PQ        F    Y+ T+  ++P N       +  ++  D D+  + + F +    N  +F  I+ IN      +   +  D E     ++ +T +D G+    N   + I + D NDN P+F +  F   + EN +   ++  +V+A DKD G N E+ ++ +    ++D  F I+  TG + I   LDRE+   +   + A D+G P   GT  I I + DIND PP F   EY   I E++   + V  V+A D D G    + Y  +S +      R N           G I ++  L+  TK  Y   + A + +     S+T    + V D N +AP+F     ++ +  D   S+GT +    ATD D   NA+++YSI  AT    F++D T+G++  A  +  E     R  V   D G+PQ
Sbjct:   44 ASDPDSGSNGMIRYSMSP--SQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVK--AEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAAD--IPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGD--NSAFSIGEVSGAVTVMKKLDREK-VPTYTLQVQAQDQGNPPR--SATVTVKITLLDVNDCTPQ--------FSKKVYSATIREDVPVN-----QLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGE----VRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAV-GQEFYRVQAYDKDHGTNGEITFSFM----QNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPT-NVVYSIVSSSGHDRCFRINP---------QGLITLSCTLNYNTKHVYVFSVSASDGM----LSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDA--SLGTSVLTVLATDRDTGSNAKISYSI--ATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQ 625

HSP 5 Score: 143.665 bits (361), Expect = 2.808e-34
Identity = 106/315 (33.65%), Postives = 159/315 (50.48%), Query Frame = 2 
Query: 1823 DNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDAR-FRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            +NPP+F+  + + +V+E+       +  V A D D G N  +RY++   Q    A  F ID  TG +     LDRE  D +   V A D GEPSL G  ++ I V D+ND  P+FE   Y   IPED S+   V  V+A+D D G N  + Y  L+     S         F I + SG + +  KLDRE  P+Y++ ++A +  NP + SATV+  IT+LD ND  P+F+  + ++ I  D    +   +   RATD D+  N E+ + IV   D   F+++  +G + + +K+  E      L V   D G P
Sbjct:   15 NNPPQFSRLQEDASVSEDAEV-GTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNS--------AFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPR-SATVTVKITLLDVNDCTPQFSKKVYSATIREDVP--VNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQP 317
[Close]
BLAST of Protocadherin-h vs. Ensembl Nematostella
Match: EDO33359 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF2])

HSP 1 Score: 212.616 bits (540), Expect = 5.322e-57
Identity = 211/773 (27.30%), Postives = 345/773 (44.63%), Query Frame = 2 
Query:  491 YSQTMKNYFRITEEEPIGTDLFEVSKFLRDK---IKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRET-------LCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAI-AYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSST--LNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDR---DIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLP 2755
            ++QT+ +   I E+  +G  L  V    RD+   + +   ++++     S+   I + TG+ +  K  D ET       + A+++      +I  I              +I D NDNRP++     E    E+T   +I   + A DKD   NA + Y +Q   ++N +F ++NS   ++   +FD  +E    +N+TI   D G P LSS    NV + V+D NDN P+F Q  +     VYE  +V  ++L+VTA DKDS  N  + Y I         D F + +D+G++ L KPLD +   ++Y  ++I  D    P E      V + V+ VN+  P+        F+++ YN +    IPEN+ P  + +  ++   A EDD S             +I D    K F+++ +       +     R                               ++ F + EN +     +  + A D+D G N ++ Y I+    +    F  +S TG + + A LDRE    YN+ V+A D G P  T + ++ + V D ND PPVF T+ Y  Q+ E  S+ +++  V A DR   D G NA I Y FL DA           +KF I   +G+I I   +D E + SYS  + A +    R  + + S  IT++D NDN P F        + +    +IGT +    A+D D + N ++ +SI+       F +D  +G++   K +  E   +  L ++  D G P
Sbjct:    3 FNQTLYSAI-IPEDFTVGGTLLTV--LARDQDAALNARVTYSIVSFSTESDYFVIDNITGVVRSSKEFDYETQRMYSFSVRAEDRGSPIRSAIATI------------HVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQN-GNNNGSFTIDNSTGEIMTRKEFD--FEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKRY--TATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTD---DAFVIIADSGDISLDKPLDKET-IENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPR--------FLNEFYNAS----IPENL-PLGTSIVRVR---AVEDDVSV------GARFIYVIKDAASSKVFLVNQTGDITLARELDYETR------------------------------RRYEFEMYENVT-SGTQVLTLFAHDRDEGINGQVFYYIVTSSVK--GVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTRILRVSANDRDDKDEGVNAEIRY-FLKDAI--------VSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEAR-LTGSSSVRITIIDVNDNRPYFLP--TRYYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDP 684

HSP 2 Score: 116.316 bits (290), Expect = 2.518e-26
Identity = 115/454 (25.33%), Postives = 205/454 (45.15%), Query Frame = 2 
Query: 1178 VYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFIL-------SASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKF-AHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGT--GNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSAT-ITVLDCNDNAP 2500
            +YE  +    +L + A D+D   NG++ YYI   +   ++  F  +S TG + L   LD +  ++ Y  +V+A+D    P   ++SA V+++V D ND  P     FTT + + + +    I          + +  +   D D+ D+        N E    + D    K F +       +  ++ D E + +    +   D G+     S ++ I + D NDN P F   ++   + EN +     + QV A D D   N ++ ++I+     SD +F ID  TG +  +  LD E+   Y + + A D G+P L  +  G + + V +IND  PVF    Y   I E+ +V   +  V A+D D   N ++ +  L           N+  KF + +++G +     LD E    Y+++I+A +  +P   S+      ++V++ NDN+P
Sbjct:  397 MYENVTSGTQVLTLFAHDRDEGINGQVFYYI---VTSSVKGVFTTNSTTGVVSLTAELDRESVYQ-YNMLVVAQDGGSPPR--TASAHVKVEVLDCNDNPP----VFTTLYYTLQLSEATSIG---------TRILRVSANDRDDKDEGV------NAEIRYFLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAI-GTPVTQVTASDLDSSLNGKVLFSILG--GNSDGKFVIDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDENTTVGHVILRVTASDLDSSLNGKVLFSIL---------EGNSDGKFVVDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSP 813

HSP 3 Score: 108.227 bits (269), Expect = 8.460e-24
Identity = 114/468 (24.36%), Postives = 205/468 (43.80%), Query Frame = 2 
Query:  497 QTMKNY-FRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADN-----QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAY----DKDIGENAMIKYYLQ-PIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVK------SFILSASKSFDRENQQTEHVRIT----CRDNGKNENSKNII-INVTDKNDNPP 1834
            +T + Y F + E    GT +  +    RD+  +   F  I   +     +    TG+  +   +DRE++   N     QDG              R     ++ E+LD NDN P++ T    L   E+T   +  L ++     DKD G NA I+Y+L+  I     + N    +    +T K  VDYE +  ++  + A D G   L+ + +V++T+ID+NDNRP F+   ++    + E  ++   + +VTA D DS  NG++ + I   +      +F +D +TG +   K LDY+   + Y  ++ A D    P   S    + + V ++ND  P         F    Y+ ++          + + + H+ +     D    +D SL+ K  F ++   +  K      + +++ +KS D E+  TE+  +     C D   N +   ++ ++V + NDN P
Sbjct:  388 ETRRRYEFEMYENVTSGTQVLTLFAHDRDEGINGQVFYYIVTSSVKGVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPP----------RTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSINDTTGQ----ITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQ--LVENVAIGTPVTQVTASDLDSSLNGKVLFSI---LGGNSDGKFVIDQNTGVVTTNKSLDYEDVTE-YTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPV--------FSQKMYSASID---------ENTTVGHVILRVTASD----LDSSLNGKVLFSILEGNSDGKFVVDQNTGVVTTNKSLDYED-VTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSP 813

HSP 4 Score: 100.908 bits (250), Expect = 1.400e-21
Identity = 87/297 (29.29%), Postives = 132/297 (44.44%), Query Frame = 2 
Query: 1904 VEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVS-ATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI--EGFRKLRLTVRVCDSGLPQKCSEDLMII 2785
            V A D+D   NA + Y+I++    SD  F ID+ TG +      D E Q  Y+ +V A D+G P  +    I + + D ND  P+F+ +EY  ++ E+  + + V  V+A D+D   NA +          YS+   N    F I   +GEIM   + D E    Y++ I   +   P   S   +   I V+D NDN P+F         ++    ++GT +    A D D   NA L YSI        F +   SG + L K +  E      L + V D G+P   S   M++
Sbjct:   25 VLARDQDAALNARVTYSIVSFSTESD-YFVIDNITGVVRSSKEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADL---------IYSIQNGNNNGSFTIDNSTGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQ--KRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPPLESIKRMVV 309

HSP 5 Score: 78.5666 bits (192), Expect = 1.182e-14
Identity = 65/217 (29.95%), Postives = 106/217 (48.85%), Query Frame = 2 
Query: 2153 PVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKK--IEGFRKLRLTVRVCDSGLPQKCS---EDLMIIV 2788
            P+F    Y   IPED +V   +  V A D+D   NAR++Y  +S    +S       + F I   +G +  + + D ET+  YS  + A +  +P + SA  +  + + D NDN P F      + +S +T   +GT +A  +A D D   NA+L YSI    +   F +D ++G +   K+   E   +  LT+ V D+G+P   S    +++IIV
Sbjct:    1 PIFNQTLYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVS----FSTES----DYFVIDNITGVVRSSKEFDYETQRMYSFSVRAEDRGSPIR-SAIATIHVQITDTNDNRPIFQPMEYETRVSENTP--LGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNSTGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIV 206
[Close]
BLAST of Protocadherin-h vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755])

HSP 1 Score: 268.855 bits (686), Expect = 4.857e-74
Identity = 230/780 (29.49%), Postives = 378/780 (48.46%), Query Frame = 2 
Query:  509 NYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETL--CADN-QDGKCVKSIRLIFKNTYRKEGVDLEF-----EILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRK--LRLTVRVCDSGLPQKCSEDLM 2779
            N ++++EE+P  T +  ++  L            +G P     + +  KTG +   +  IDRETL  C +  +D KC     +   +  +  G+         E+LDINDN P + + ++ L  PE+T   ++  + +A D+D G N + +Y L      N  F L+ +E+     P+     ++D E K  +++ I   D G+P  +S+  +++TV D NDN P+F +N +     + E +     +L+V A D D+  NG I+Y +  +    ++    +D  TG + +K  +D +  +   KF V+A+D  P     SS A V I + D ND  P I I      +   +      NI E+M P  + +A +Q+ D DE + + + C +     F+L     S  ++ + + L  +   D E  +   + I   D+G     ++ ++ + VTD NDN P F+      N  E+    ++ I  V A D D G NAEL Y+II  +  + + F I+S TG++ +   LDRE+ + Y   V A D+G PS TGT  ++I VED ND  P F    Y F + E+    + VGVV  +D D G+N++++     D             KF I+  +G I+ +   DRE + +Y+  ++A++  +P + S+ V  TI VLD NDNAP  T P N+S   +       T + + +A D D   NAEL Y+I       +F + + SG + LA+   G  K   RL VRV D G P + +  L+
Sbjct:   41 NIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGSP----YLRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGSNGVAEYALSAGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYE--AELPENSPPGHSVLQVRANDADTGANGDIDYSLHQAS-DTVQRLLRIDRSTGIIYVKGLVDREEDNL-LKFYVVARDRGPN--SKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVA----NISEDM-PIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVI-DVVATDADSGVNAELVYSII--ESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDN-----------GKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPR-SSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALV 790
[Close]
BLAST of Protocadherin-h vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755])

HSP 1 Score: 268.855 bits (686), Expect = 2.389e-73
Identity = 232/784 (29.59%), Postives = 380/784 (48.47%), Query Frame = 2 
Query:  509 NYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTG---MTKIKKRIDRETL--CADN-QDGKCVKSIRLIFKNTYRKEGVDLEF-----EILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLI----SDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKF-NFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRK--LRLTVRVCDSGLPQKCSEDLMII 2785
            N ++++EE+P  T +  ++  L            +G P     + +  KTG    T+I   IDRETL  C +  +D KC     +   +  +  G+         E+LDINDN P + + ++ L  PE+T   ++  + +A D+D G N + +Y L      N  F L+ +E+     P+     ++D E K  +++ I   D G+P  +S+  +++TV D NDN P+F +N +     + E +     +L+V A D D+  NG I+Y +  +    ++    +D  TG + +K  +D +  +   KF V+A+D  P     SS A V I + D ND  P I I      +   +      NI E+M P  + +A +Q+ D DE + + + C +     F+L     S  ++ + + L  +   D E  +   + I   D+G     ++ ++ + VTD NDN P F+      N  E+    ++ I  V A D D G NAEL Y+II  +  + + F I+S TG++ +   LDRE+ + Y   V A D+G PS TGT  ++I VED ND  P F    Y F + E+    + VGVV  +D D G+N++++     D             KF I+  +G I+ +   DRE + +Y+  ++A++  +P + S+ V  TI VLD NDNAP  T P N+S   +       T + + +A D D   NAEL Y+I       +F + + SG + LA+   G  K   RL VRV D G P + +  L+ +
Sbjct:   41 NIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGSP----YLRVDSKTGEIYTTEIP--IDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGIIEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGSNGVAEYALSAGPDANQLFGLQVAEDVDEKIPQVIVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYE--AELPENSPPGHSVLQVRANDADTGANGDIDYSLHQAS-DTVQRLLRIDRSTGIIYVKGLVDREEDNL-LKFYVVARDRGPN--SKSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVA----NISEDM-PIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVI-DVVATDADSGVNAELVYSII--ESSAASLFEINSNTGEIRVRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPVGVVTVSDADKGENSQVTLFVEPDN-----------GKFIIQNGTGTILSSISFDREKESTYTFRLKAVDAGDPPR-SSYVGVTINVLDENDNAPYVTKPANSSYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHV 792
[Close]
BLAST of Protocadherin-h vs. Ensembl Medaka
Match: pcdh11 (protocadherin-11 X-linked [Source:NCBI gene;Acc:101161492])

HSP 1 Score: 263.077 bits (671), Expect = 5.039e-72
Identity = 258/877 (29.42%), Postives = 401/877 (45.72%), Query Frame = 2 
Query:  446 KTMNAIGLLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIK--SEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADN-QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-------VFNLDYTSGILFLAKKIEG--FRKLRLTVRVCDSGLPQKCSEDLMIIV----TTTKSTFTDAE-----NSNGDNNSLVKTGITESNG------AIIA-CLIVIFVILVMAMV 2932
            +T   + LL  +LI      ++Y  + EE+P    IG  L ++   L   I+  S  +F  +        + ++  TG +     RIDRE LC+    + +C   I +          V + F I D+NDN P++ + V+ +  PE+T   +   +  A+D D+G N +  Y L         F L+     +I TP+ D          +D E +  F + I  ED G P  SST  ++VT+ D+NDNRP F  +      +V E       + ++ A D D   N +I++     +    +  F ++S TG + +K+PLD +     +K IV+A D    P    S ATV + V DVND +P I+    T ++ +  NGTV ++  EN  P  + +A I + D D D    + C  D+   FRL    N    F+L  +   D E  +   ++I   D G      S  ++I + D+NDN P F   +   ++ EN     + I ++ A D D G NAE+ YT+    P +   F ID  +G + +   LDRE+Q+ ++  VIA D G   L     + ++V+D+ND  P F   EY F +PE+  +   VG++  TD D G NA I+   L           N  + F I   +G I      DRE + SY+ +++AI+   P   S+    TI V+D NDN P F  P +N S   + T  + G  +    A D D   NAEL YSI+ +           +F +D  SG + L +KI G      RL V+V D G P+      ++ +    T + +TF   +      +  D N        ++NG      AIIA  + VI VI V A+V
Sbjct:    6 QTFPLVVLLTCVLILCKAQERDYI-VKEEQPENVRIGNLLKDLDLNLDPSIRLSSPLQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQNYEL---VKSVTEFGLD-----IIETPEGDKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELE--VSVPENAPTGTSVAQLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPLDREV-TPVHKLIVLASDGGSTP----SRATVIVNVTDVNDNVPAID----TRYIINLVNGTVLLS--ENA-PLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFND--QFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLI-KISATDADSGSNAEIIYTL---GPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSIL-----------NGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPT-SSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGADLGLHRLVVKVRDLGQPESLQAITLVHLFVNDTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTALV 841
[Close]
BLAST of Protocadherin-h vs. Ensembl Medaka
Match: pcdh11 (protocadherin-11 X-linked [Source:NCBI gene;Acc:101161492])

HSP 1 Score: 262.692 bits (670), Expect = 1.220e-71
Identity = 258/877 (29.42%), Postives = 401/877 (45.72%), Query Frame = 2 
Query:  446 KTMNAIGLLLFILIKYSQTMKNYFRITEEEP----IGTDLFEVSKFLRDKIK--SEYRFTVIGDPNFSECISIQDKTG-MTKIKKRIDRETLCADN-QDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQS-IKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFD----------VDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNE--NSKNIIINVTDKNDNPPKFAH-KFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINN-SLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPY-------VFNLDYTSGILFLAKKIEG--FRKLRLTVRVCDSGLPQKCSEDLMIIV----TTTKSTFTDAE-----NSNGDNNSLVKTGITESNG------AIIA-CLIVIFVILVMAMV 2932
            +T   + LL  +LI      ++Y  + EE+P    IG  L ++   L   I+  S  +F  +        + ++  TG +     RIDRE LC+    + +C   I +          V + F I D+NDN P++ + V+ +  PE+T   +   +  A+D D+G N +  Y L         F L+     +I TP+ D          +D E +  F + I  ED G P  SST  ++VT+ D+NDNRP F  +      +V E       + ++ A D D   N +I++     +    +  F ++S TG + +K+PLD +     +K IV+A D    P    S ATV + V DVND +P I+    T ++ +  NGTV ++  EN  P  + +A I + D D D    + C  D+   FRL    N    F+L  +   D E  +   ++I   D G      S  ++I + D+NDN P F   +   ++ EN     + I ++ A D D G NAE+ YT+    P +   F ID  +G + +   LDRE+Q+ ++  VIA D G   L     + ++V+D+ND  P F   EY F +PE+  +   VG++  TD D G NA I+   L           N  + F I   +G I      DRE + SY+ +++AI+   P   S+    TI V+D NDN P F  P +N S   + T  + G  +    A D D   NAEL YSI+ +           +F +D  SG + L +KI G      RL V+V D G P+      ++ +    T + +TF   +      +  D N        ++NG      AIIA  + VI VI V A+V
Sbjct:    6 QTFPLVVLLTCVLILCKAQERDYI-VKEEQPENVRIGNLLKDLDLNLDPSIRLSSPLQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQNYEL---VKSVTEFGLD-----IIETPEGDKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELE--VSVPENAPTGTSVAQLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPLDREV-TPVHKLIVLASDGGSTP----SRATVIVNVTDVNDNVPAID----TRYIINLVNGTVLLS--ENA-PLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFND--QFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLI-KISATDADSGSNAEIIYTL---GPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSIL-----------NGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPT-SSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGADLGLHRLVVKVRDLGQPESLQAITLVHLFVNDTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTALV 841
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BLAST of Protocadherin-h vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 257.684 bits (657), Expect = 1.724e-70
Identity = 250/797 (31.37%), Postives = 369/797 (46.30%), Query Frame = 2 
Query:  515 FRITEEEPIGTDLFEVS--KFLRDKIKSEYRFTVIGDPNFSECISIQDKTG---MTKIKKRIDRETL--CADNQDGK-CVKSIRLIFKNTYRKEG---VDLEFEILDINDNRPMWPTNVVELLYPESTEKQSI-KLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKF----DVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPN--QAVYETTSVEAIILKVTAIDKDSEQNGRINY----YIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVH-----INIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRL------ISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKN--ENSKNIIINVTDKNDNPPKFAHKFNFNVN-ENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRK----LRLTVRVCDSGLPQKCSEDLMII 2785
            +R+ EE+P  T +  ++    L D     Y+  V G P     + +  KTG    T+I   IDRETL  C     GK C     +   +  +      ++   E+ DINDN P +P +V+ +  PE+T   ++  + +A D+D   N +  Y L         F L+ +++R    P+     ++D E K  +++TI A D G P   S   ++V V D NDN P+F     HP+    V E + V   +L+V A D D   NG I Y     +DP +P+ +R    +D  TG + +K PLD +    S  F V+A+D  P P   SS   V I+V D ND  P + I         R  G V       NI E+M P  + +A +Q+ D DE + + + C +     F+L       SD NK K F L  +   D E  +   V I   D+G     ++ ++ + VTD NDN P F+    F V+    +     I  V A D D G NAEL Y I+         F ID  TG++    PLDRE ++ Y   V A D+G P   GT  ++I V D ND  P F    Y F + E+    S VG+V   D D G+NA +      D             KF ++  +G I+ +   DRE + SY+  ++A++   P + S+ V  TI VLD NDN P  T P N+S   +    S  + + +  A D D   NA+L +SI       +F +  +SG + LAK++   RK     RL VRV D G P + +  L+ I
Sbjct:   26 YRVQEEQPPNTLIGSLAADHGLPDS-GHLYKLEV-GAP----YLRVDGKTGDIFTTEIP--IDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKF----EHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDP-VPKLLR----IDRTTGIIYVKGPLDREE-INSLSFYVVARDKGPQPK--SSKTFVTIEVTDQNDNAPAVEI---------RGIGLVTHSEGIANISEDM-PVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSD-NKRKYF-LQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTI-FEVDFAEENQPGETILDVTATDADSGTNAELFYNIVG-DSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDG-----------GKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPR-SSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMT--RKHGGLHRLVVRVSDRGKPPRHATALVHI 774

HSP 2 Score: 148.673 bits (374), Expect = 9.954e-36
Identity = 165/587 (28.11%), Postives = 264/587 (44.97%), Query Frame = 2 
Query:  521 ITEEEPIGTDLFEVSKFLRDKIKS---EYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVD-------LEFEILDINDNRPMWPTNVVELL-YPES----TEKQSIKLAIAY----DKDIGENAMIKYYLQ---PIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKS-YKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSK--NIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRD--IGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILV-EDINDMPPVFETVEYRFQIPED 2197
            ++E  P+G  + +V     D   +   EY      DP   + + I   TG+  +K  +DRE + +            L F    R +G         +  E+ D NDN P      + L+ + E     +E   +  A+A     DKD GENA++   +    P      + +  +++ +  L     +DYE  + + + IVA D G P LSST ++KV V D+NDN P F   +F  + A  E       IL VTA D DS  N  + Y I      +I+  F +D +TGE+K + PLD  R HK  Y+F V A D     ++   +ATV I+V D ND  P+        F+   Y+     ++ ENM P  S +  + + D D+ + + +  S++  +  + +  +      ILS S SFDRE + +   R+   D G+   S    + INV D+NDN P      N +  + +   + D  +  VEA D D G NA+L ++I    P     FRI   +G++ +   + R+    + + V   D+G+P    T  + I V E I+++  V   V +    P D
Sbjct:  253 VSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDP-VPKLLRIDRTTGIIYVKGPLDREEINS------------LSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFA--EENQPGETILDVTATDADSGTNAELFYNI--VGDSYIKGLFEIDPNTGEVKARTPLD--REHKERYEFRVTAADKGSPVHK--GTATVVIKVLDCNDNDPK--------FMLSGYS----FSVLENM-PPLSPVGMVTVLDMDKGENAHVHLSVE-PDGGKFV--VQNGTGTILS-SISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQ--LFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETISNVSLVEALVGHSLYTPLD 799
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BLAST of Protocadherin-h vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1)

HSP 1 Score: 2227.21 bits (5770), Expect = 0.000e+0
Identity = 1085/1091 (99.45%), Postives = 1090/1091 (99.91%), Query Frame = 2 
Query:  404 YFNFNFFEIFLSIIKTMNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMATSVYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKVDNSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI 3676
            ++NFNFFEIFLSIIKTMNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQIN+YFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIED DEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMAT+VYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKV+NSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI
Sbjct:   24 FYNFNFFEIFLSIIKTMNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMATTVYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKVENSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI 1114
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BLAST of Protocadherin-h vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1)

HSP 1 Score: 2201.79 bits (5704), Expect = 0.000e+0
Identity = 1071/1075 (99.63%), Postives = 1074/1075 (99.91%), Query Frame = 2 
Query:  452 MNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMATSVYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKVDNSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI 3676
            MNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQIN+YFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIED DEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMAT+VYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKV+NSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI
Sbjct:    1 MNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMATTVYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKVENSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI 1075
[Close]
BLAST of Protocadherin-h vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1)

HSP 1 Score: 2167.12 bits (5614), Expect = 0.000e+0
Identity = 1054/1058 (99.62%), Postives = 1057/1058 (99.91%), Query Frame = 2 
Query:  503 MKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMATSVYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKVDNSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI 3676
            MKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQIN+YFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIED DEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMAT+VYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKV+NSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI
Sbjct:    1 MKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLVKTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDKQSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKIYAESQISGRPESPCYRTIDAMATTVYNPITQVPADMSLNHINCQPNSSNRYTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLNKKQNETPDRFNPKVENSNILINYDARSIPRSVSLLRFYEKQNEDDAETVNDKNQNYDGSNRPKYAYEALREGSFI 1058
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BLAST of Protocadherin-h vs. Planmine SMEST
Match: SMESG000043679.1 (SMESG000043679.1)

HSP 1 Score: 395.201 bits (1014), Expect = 2.155e-118
Identity = 265/792 (33.46%), Postives = 412/792 (52.02%), Query Frame = 2 
Query:  461 IGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPN-FSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPE----STEKQSIKLAIAYDKDIGENAMIKYYLQP--IYHDNLNFNLE---NSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNKESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPY-SLHRTNAFEKFQ-IKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTK 2800
            I    +IL+  S       +I EE   GT++  ++K+L++ I S      I D N    C+ I  +T +  +K RIDRE+LC +  +  C   +R     +Y  + +++E  ILDINDN P WP     + + E      E ++I +  A+D D+ EN+ I Y+L+      DN  + ++   ++  R+ L P   +D E    + + ++AED G P  + +L + + ++D NDN P F +  ++ N+ + E  ++  + L V+A D D   NG+I Y I+         ++F   + G + ++K +DYD G K ++F V+A D AP  Y  +    V I V D NDE P+I ++     V+ R   T    I EN     S LAHI+++D D   +  + CSL N +  RL       K F + A  +FDRE +  E V I C+D   N  SK+I+  + D+NDN PKF   F+F V EN S  N  +G+V A+DKD  +N+++ + II      +  F+IDS +GKMY    LDREE + +N+T++A D G+P  TGTG + I V DIND  P F    Y F I E+A + + VG V A DRD+  N ++ Y  +SD F   S  + ++   FQ I+ D GEI+    LDRE +  Y + + AI+  +P  +++T +  I ++D NDN P F    N ++ SI T +S+G EI    A D D  +N+E+ Y I        F+ +  +  L L   +      +L +  CD G P KCS  L + +   K
Sbjct:    2 ITFAAWILLLISSITCEKIQIFEEPKNGTEIEVLTKYLKNNIVSVSTSYRIFDGNKLLNCLHIDPETHVVTVKNRIDRESLCPNQIN--CDIMLRFFISPSYVSKSLNVE--ILDINDNAPSWPQQSKVVSFTEFEGNKLESRTIHIDKAFDPDVNENSQIDYFLKDRNGKTDNGVWKIKYDSSTSRRIELMPIKVIDREQVDVYELILIAEDNGSPKKTGSLELIIQILDKNDNGPIFDRAKYYANK-LSENANIGFVALTVSAKDADYLANGKITYRIEDQKAS----EYFNIGNNGNIMVRKNIDYDAGVKGFQFSVLAIDGAPEEYRKTGECEVVIMVIDENDEKPEIIVH-----VTKRDPLTNEPAIIENEVISNSVLAHIEVKDPDFGGRDIVSCSLSNNDKMRLEQVSPSDKEFQILAIANFDREEKSMEKVDILCKDQAYNTASKSIVFQILDRNDNSPKFTRVFHFRVLENASVPNMFVGEVMAVDKDAERNSKIEFQIIG---NEEHFFQIDS-SGKMYTKQVLDREETEKFNVTILAKDGGDPPKTGTGLVTIEVVDINDWKPEFSLSLYEFSISENAGIGTSVGTVTAIDRDLPANTKMKYRIISDRFSKESYFQYSSSLPFQMIRHDRGEIVTKYLLDREKQSHYLLTVVAIDNGHPNSYTSTTTVKINIIDVNDNFPTFKTS-NKTVFSIQTTESVGYEIGTVEAVDLDFGENSEIVYQIEEGNPYGYFSFNTQNKKLILNSVLSKQDDHKLVISACDKGKPPKCSNPLWVTIKVVK 774
[Close]
BLAST of Protocadherin-h vs. Planmine SMEST
Match: SMESG000010675.1 (SMESG000010675.1)

HSP 1 Score: 346.665 bits (888), Expect = 1.932e-101
Identity = 249/776 (32.09%), Postives = 387/776 (49.87%), Query Frame = 2 
Query:  671 IKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIK-LAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDN---KESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEK-SIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFR-----KLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLV-KTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKN 2962
            +  RIDRE +C       C   +++    T R   V +  EI D+ND+ P W  N  ++++ E     S K + I++D D G+N  IKY L+     + +  +   E+ L L     +D E K  + +TI++ DRG P  S  L V+V ++DINDN P+F  ++F P + + ET  V++++LK+T  D D+ QNG  ++   P+     +  F +  D GE+ + + LDY+ G   + F VI KD A   YE SS + VEI ++D NDE PQI  Y   P    R N      I +   P  + +A IQ  D D  +   + C+ DN    ES  L +  N    F L  ++  DRE ++   +RI C D+  ++ S NI +++ D NDN PKF+    + ++ EN         QV+AIDKD GKN  + Y+I    P  D  F IDS TG +     LDRE ++ Y   ++A D G P L+ T   L+ V+D ND P + ET  Y F++ E++  N+ VG V ATD+D            +    YSL   +   KF I + +G I+  SKLDRE +  Y     A + +N    SA+    I V D NDN P F  P ++      + K + G  +    A D D+ ++A + YS+V      +F+LD  +G L+L + ++G          L +  CD G P+ C+      +   ++   D   + G  N L+  +G++E+   II  LI   + ++M  + + FL+R K+
Sbjct:   64 VNNRIDREAICP-TSSINCFIILKVTLHGTDRI--VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLE----SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEFSFSFSPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYERSSESRVEIIISDENDEYPQIKFY---PM---RTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSL-TPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI----PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD------------NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN----SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRN--GDLTKTKGQPNLLIDSSGMSEN---IIIALITFLLFMIMVTIFIIFLLRRKS 799
The following BLAST results are available for this feature:
BLAST of Protocadherin-h vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PCDH18.991e-7529.37protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655][more]
PCDH17.440e-7429.37protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655][more]
PCDH11Y7.065e-7129.28protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
PCDH11Y7.065e-7129.28protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
PCDH11Y1.082e-7029.40protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
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BLAST of Protocadherin-h vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
fmi-17.599e-5128.14FlaMIngo (Cadherin plus 7TM domain) homolog [Sour... [more]
fmi-19.007e-4826.47FlaMIngo (Cadherin plus 7TM domain) homolog [Sour... [more]
cdh-11.259e-4226.85CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4... [more]
hmr-14.242e-3425.90Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Pr... [more]
hmr-14.242e-3425.90Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Pr... [more]
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BLAST of Protocadherin-h vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
stan8.378e-6029.77gene:FBgn0024836 transcript:FBtr0304900[more]
stan8.970e-6029.77gene:FBgn0024836 transcript:FBtr0304899[more]
stan8.970e-6029.77gene:FBgn0024836 transcript:FBtr0300578[more]
stan9.195e-6029.77gene:FBgn0024836 transcript:FBtr0330601[more]
stan9.973e-6029.77gene:FBgn0024836 transcript:FBtr0339463[more]
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BLAST of Protocadherin-h vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh116.410e-7930.36protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
pcdh1a3.985e-7530.66protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh1a2.091e-7431.09protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh7b2.425e-7128.63protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-... [more]
pcdh7b3.210e-7128.63protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-... [more]
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BLAST of Protocadherin-h vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSXETT00000047798.12.284e-8230.68protocadherin 11 X-linked [Source:NCBI gene;Acc:10... [more]
ENSXETT00000047804.12.711e-8230.68protocadherin 11 X-linked [Source:NCBI gene;Acc:10... [more]
ENSXETT00000047801.13.969e-8230.68protocadherin 11 X-linked [Source:NCBI gene;Acc:10... [more]
pcdh175.129e-7329.54protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh171.387e-7229.54protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
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BLAST of Protocadherin-h vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pcdh13.828e-7729.61protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692][more]
Pcdh13.828e-7729.61protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692][more]
Pcdh11x6.739e-7630.58protocadherin 11 X-linked [Source:MGI Symbol;Acc:M... [more]
Pcdh11x9.044e-7630.58protocadherin 11 X-linked [Source:MGI Symbol;Acc:M... [more]
Pcdh11x2.703e-7530.58protocadherin 11 X-linked [Source:MGI Symbol;Acc:M... [more]
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BLAST of Protocadherin-h vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q6KEQ9|PC11X_PIG3.860e-7830.60Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN... [more]
sp|Q08174|PCDH1_HUMAN4.318e-7429.37Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 P... [more]
sp|Q71M42|PC11X_PANTR8.560e-7029.49Protocadherin-11 X-linked OS=Pan troglodytes OX=95... [more]
sp|Q6WYY1|PC11X_PANPA8.946e-7029.49Protocadherin-11 X-linked OS=Pan paniscus OX=9597 ... [more]
sp|Q6X862|PC11X_GORGO1.534e-6929.49Protocadherin-11 X-linked OS=Gorilla gorilla goril... [more]
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BLAST of Protocadherin-h vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A158R9064.397e-9127.79Uncharacterized protein OS=Taenia asiatica OX=6051... [more]
A0A068Y5178.278e-8928.05Protocadherin 9 OS=Echinococcus multilocularis OX=... [more]
A0A158RDU31.821e-8627.09Uncharacterized protein OS=Hydatigena taeniaeformi... [more]
K1QH301.512e-8532.44Protocadherin-11 X-linked OS=Crassostrea gigas OX=... [more]
A0A0S1VVS03.787e-8431.37Protocadherin-h OS=Lethenteron camtschaticum OX=98... [more]
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BLAST of Protocadherin-h vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh117.659e-7830.07protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
pcdh111.268e-7729.95protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
pcdh111.234e-7629.95protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
pcdh1a1.328e-7329.89protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh1a4.611e-7330.30protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
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BLAST of Protocadherin-h vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSPMAT00000010725.12.546e-5826.90pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 ... [more]
pcdh114.452e-5526.65protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
ENSPMAT00000008517.19.251e-5527.03pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 ... [more]
ENSPMAT00000009557.19.552e-4826.69pep scaffold:Pmarinus_7.0:GL476748:59426:101420:1 ... [more]
ENSPMAT00000006996.16.105e-4627.61pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 g... [more]
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BLAST of Protocadherin-h vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protocadherin-h vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO354128.547e-6630.37Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO461898.560e-6627.87Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO303641.095e-6028.74Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO482371.918e-5827.99Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO333595.322e-5727.30Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Protocadherin-h vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh1b4.857e-7429.49protocadherin-1 [Source:NCBI gene;Acc:101174755][more]
pcdh1b2.389e-7329.59protocadherin-1 [Source:NCBI gene;Acc:101174755][more]
pcdh115.039e-7229.42protocadherin-11 X-linked [Source:NCBI gene;Acc:10... [more]
pcdh111.220e-7129.42protocadherin-11 X-linked [Source:NCBI gene;Acc:10... [more]
pcdh1a1.724e-7031.37protocadherin-1 [Source:NCBI gene;Acc:101157079][more]
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BLAST of Protocadherin-h vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000034072.10.000e+099.45SMESG000034072.1[more]
SMESG000034072.10.000e+099.63SMESG000034072.1[more]
SMESG000034072.10.000e+099.62SMESG000034072.1[more]
SMESG000043679.12.155e-11833.46SMESG000043679.1[more]
SMESG000010675.11.932e-10132.09SMESG000010675.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30007561 ID=SMED30007561|Name=Protocadherin-h|organism=Schmidtea mediterranea sexual|type=transcript|length=3942bp
CGATCTCCACATACTTTTAGATTTTTTTTTCAAAGAGAAAACTTGTCTAA
GACCTTTGACATTTGAAATTTTCTTTTTTCCAAAATATCGAGAATTACAA
GATCTAAAACTTTAGTGACCATGACATGTTTGAAATTTCTTTGCAATATA
GTCAAAAATACGAAAAATCAAAATGTTGTAACCTAAATGGCGTTTAATTC
TATGGATTCCTAAAGTCATGACTTACGCGACTTAGTAAATAGAATATTCA
AAGCTTCGCTAAGTTTAATGTAAAATCTTTGAAAAGGTTCTTTTTGACGG
GAAATGTTAAAAATATTCACAAATTTGAGAGACTTTTAAAACTACCAAAA
GTGAGAGGCGAAATGTTATTCTTCTGAGACAATTCAGATTAAGAAAATGA
AAATATTTCAATTTTAATTTTTTTGAAATTTTTTTATCAATAATTAAGAC
AATGAACGCAATCGGACTTCTACTCTTCATACTGATCAAATACTCGCAAA
CAATGAAAAACTATTTCCGAATTACTGAAGAGGAACCGATCGGAACAGAT
CTGTTTGAAGTATCTAAATTCCTTCGGGACAAAATCAAATCAGAATACCG
ATTTACTGTCATAGGAGATCCCAACTTTTCTGAATGCATTTCAATTCAAG
ACAAAACTGGCATGACGAAAATCAAGAAAAGAATTGACAGAGAAACCCTC
TGTGCTGACAATCAAGATGGAAAATGTGTCAAATCAATCCGTTTGATATT
TAAGAATACATACCGAAAGGAAGGGGTGGATTTAGAATTTGAAATTCTTG
ACATCAACGACAACCGGCCAATGTGGCCGACAAATGTTGTCGAATTGCTT
TATCCGGAATCGACAGAAAAGCAGTCTATTAAATTAGCCATTGCCTACGA
TAAAGACATTGGAGAGAATGCCATGATCAAATATTACCTTCAACCAATCT
ATCACGATAACCTCAATTTCAACTTGGAAAACAGTGAAAACCGTTTAATT
CTAACTCCAAAATTTGATGTCGATTATGAAACGAAAAGATTTTTCAATAT
TACCATTGTAGCGGAAGATCGAGGAAGACCAGTCCTCTCTAGTACTCTAA
ATGTCAAAGTGACTGTCATTGATATCAATGACAACAGACCGCAATTTATA
CAGAATGTCTTTCATCCAAATCAAGCTGTGTACGAAACAACTTCAGTTGA
GGCGATAATTCTTAAAGTTACAGCAATTGATAAAGATTCTGAACAAAACG
GACGAATTAACTATTACATTGACCCATCAATGCCTCAATTCATAAGAGAT
CAGTTTTTCTTGGATTCTGATACAGGAGAATTGAAACTTAAAAAGCCTTT
AGACTATGACCGCGGTCACAAGTCTTACAAGTTCATTGTAATCGCTAAAG
ACAGTGCACCGGCGCCTTACGAATTGAGTTCTAGTGCGACAGTCGAAATA
CAAGTAGCCGATGTGAATGATGAGATCCCTCAGATTAATATTTATTTCAC
TACACCTTTCGTGTCCGACCGCTATAATGGAACAGTTCATATTAATATCC
CTGAAAACATGAATCCTCAACAATCGGATTTGGCGCATATACAAATCGAA
GATGCCGACGAAGACGATAAAAGTTTTATAGACTGTAGCTTAGATAATAA
AGAATCCTTTCGACTGATTTCCGACATTAACAAAGTGAAAAGTTTCATAC
TGTCGGCGAGTAAAAGCTTTGATCGAGAAAACCAACAAACAGAACACGTG
AGAATCACCTGTCGGGATAATGGGAAAAATGAAAACTCCAAAAATATTAT
CATAAATGTCACAGACAAAAATGACAATCCACCAAAGTTTGCCCATAAAT
TCAATTTCAATGTCAATGAAAACACCTCGTACCGTAATCGGGATATTGGT
CAGGTCGAAGCTATTGATAAAGACCTTGGAAAAAACGCAGAGCTAAGATA
TACGATAATTAATGTTCAGCCGAGATCCGATGCTAGATTTCGCATAGATT
CTTTTACCGGTAAAATGTATATTGATGCTCCTCTAGACAGAGAAGAACAA
GATCACTACAATATAACAGTAATTGCTGTTGACCAAGGTGAACCATCACT
AACCGGGACTGGAAACATCCTAATATTAGTTGAGGACATTAATGACATGC
CTCCGGTATTTGAAACTGTAGAATACCGGTTTCAAATACCTGAAGACGCT
TCGGTAAATAGCAAAGTTGGAGTCGTTCAAGCTACTGATCGTGACATCGG
TAAAAACGCAAGAATCTCATATCATTTTCTAAGCGATGCGTTTCCATACA
GTCTCCATCGAACAAATGCCTTTGAAAAGTTTCAAATCAAAAAAGACTCA
GGTGAAATAATGATCACTTCAAAATTGGACAGAGAAACAAAACCTTCATA
TTCAATTATAATTGAAGCTATAAATGTTGTGAATCCAAGAAAGTTTTCGG
CAACTGTGTCAGCAACGATCACTGTTCTCGACTGTAATGACAATGCCCCA
AAATTCACCGCCCCAATAAATAATTCCTTAATCAGCATTGATACCGAAAA
ATCCATTGGAACTGAAATTGCTCTGTTTCGAGCTACGGATGCAGATGAAA
ATAAAAATGCAGAACTCACATATTCCATCGTGAGAGCTACAGATCCTTAC
GTTTTCAATCTAGATTATACGAGTGGTATCTTATTTCTAGCAAAGAAAAT
TGAAGGTTTCAGAAAGTTACGGTTGACTGTTCGAGTGTGTGACAGTGGAT
TACCGCAGAAATGCTCAGAGGATCTCATGATTATTGTAACAACGACAAAG
TCAACATTTACAGACGCAGAAAATAGCAATGGGGATAACAACTCTCTCGT
CAAAACAGGAATAACAGAATCCAATGGAGCAATTATTGCTTGTTTAATTG
TAATATTTGTGATATTGGTCATGGCGATGGTGATTATGTTCTTCCTTATT
CGGAATAAGAATTTCATGTGGAAAAGAAGATTAGACAGTAATTATGACAA
ACAGTCAATTTCTGAAATCCAAGTCAGAAATACAGATTCAACATTTTTGA
AGAAAGAAGCCGGGTCAATATATGAAGGCGATCTTCTTCTGTTGAATGAA
AGAAATAAAGCAAACAACATGATGCACAATTCAATGTACTCTCCAAAAAT
TTATGCTGAATCTCAAATTAGTGGACGACCTGAATCTCCATGTTACAGAA
CTATTGACGCTATGGCTACATCTGTTTATAATCCCATAACTCAAGTGCCA
GCTGATATGAGTCTTAACCACATAAATTGTCAACCAAATTCAAGCAACCG
CTACACACAACAACATTTCAGAGGTGCCTCTGAACCAGTTTATCGATATT
CAAATGTTTGTGGAAGAAATGTTTTGACCCCTACCATTTCAGTCCATCCA
TCTTATTATCAGTCCATCACTTCTCCAGGAATCGCAACAATTAGATTGAA
CAAAAAACAAAACGAAACTCCTGACAGATTCAATCCGAAAGTCGACAATT
CGAATATCCTGATCAATTATGACGCAAGATCAATTCCAAGATCGGTTTCA
CTGTTGAGATTTTATGAGAAACAAAATGAGGATGATGCTGAAACTGTCAA
TGACAAGAATCAGAATTATGACGGCAGCAACCGGCCGAAGTACGCATATG
AAGCATTGAGAGAAGGCAGCTTCATCTAGTTTTGACCAGATCGGATCTGT
AAATATCCTATAAATCTCTATCAAGATTTATGAATCGACATGATTCCAAA
TTGATATGAATAACGTTTTATCAACTGTTGGATTTTGTAAATAATAATAA
AATGATATTCGATTATTTATCAGAAAGAAAACTATGTGATTCAAACAAAA
AATGTAATTTAATTTTCGATACAGCGATTTCAAGCAACGTGTCTAAAAGT
AAAGTAAAATGTGTTTTGCTTGCCGAGAAATATATTAAAATT
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protein sequence of SMED30007561-orf-1

>SMED30007561-orf-1 ID=SMED30007561-orf-1|Name=SMED30007561-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1076bp
MNAIGLLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYR
FTVIGDPNFSECISIQDKTGMTKIKKRIDRETLCADNQDGKCVKSIRLIF
KNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIKLAIAYD
KDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNI
TIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVE
AIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPL
DYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINIYFT
TPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDADEDDKSFIDCSLDNK
ESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNII
INVTDKNDNPPKFAHKFNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRY
TIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSL
TGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIG
KNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSY
SIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSLISIDTEK
SIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKI
EGFRKLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLV
KTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKNFMWKRRLDSNYDK
QSISEIQVRNTDSTFLKKEAGSIYEGDLLLLNERNKANNMMHNSMYSPKI
YAESQISGRPESPCYRTIDAMATSVYNPITQVPADMSLNHINCQPNSSNR
YTQQHFRGASEPVYRYSNVCGRNVLTPTISVHPSYYQSITSPGIATIRLN
KKQNETPDRFNPKVDNSNILINYDARSIPRSVSLLRFYEKQNEDDAETVN
DKNQNYDGSNRPKYAYEALREGSFI*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000240body wall musculature
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR002126Cadherin-like_dom
IPR020894Cadherin_CS
IPR015919Cadherin-like_sf
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0005886plasma membrane
GO:0016021integral component of membrane
Vocabulary: biological process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007155cell adhesion
Vocabulary: molecular function
TermDefinition
GO:0005509calcium ion binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126Cadherin-likePRINTSPR00205CADHERINcoord: 569..582
score: 35.54
coord: 235..264
score: 22.93
coord: 62..81
score: 26.15
coord: 325..344
score: 45.59
coord: 633..659
score: 25.76
coord: 668..685
score: 48.02
coord: 309..321
score: 30.73
IPR002126Cadherin-likeSMARTSM00112CA_2coord: 381..462
e-value: 2.2E-7
score: 40.5
coord: 486..569
e-value: 1.6E-27
score: 107.4
coord: 38..124
e-value: 0.82
score: 4.6
coord: 710..789
e-value: 0.27
score: 9.6
coord: 257..344
e-value: 6.3E-23
score: 92.2
coord: 593..684
e-value: 8.0E-25
score: 98.5
coord: 147..231
e-value: 1.1E-16
score: 71.4
IPR002126Cadherin-likePFAMPF00028Cadherincoord: 576..676
e-value: 3.2E-16
score: 59.6
coord: 697..772
e-value: 7.3E-7
score: 29.6
coord: 136..223
e-value: 6.0E-10
score: 39.4
coord: 243..336
e-value: 1.6E-15
score: 57.3
coord: 468..561
e-value: 1.0E-18
score: 67.5
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 682..797
e-value: 3.0E-16
score: 61.8
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 22..119
e-value: 1.7E-8
score: 36.5
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 120..229
e-value: 4.3E-19
score: 71.0
coord: 351..459
e-value: 2.1E-12
score: 49.5
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 230..346
e-value: 2.2E-25
score: 91.3
coord: 567..681
e-value: 2.6E-28
score: 100.8
coord: 460..566
e-value: 3.4E-28
score: 100.4
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 617..861
NoneNo IPR availablePANTHERPTHR24028:SF257coord: 617..861
coord: 695..782
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 25..533
coord: 695..782
NoneNo IPR availablePANTHERPTHR24028:SF257coord: 527..688
NoneNo IPR availablePANTHERPTHR24028:SF257coord: 25..533
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 527..688
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 149..233
score: 19.078
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 572..686
score: 26.093
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 244..346
score: 22.739
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 17..126
score: 10.659
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 695..793
score: 9.783
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 464..571
score: 26.619
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 359..464
score: 14.43
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 575..682
e-value: 1.51913E-28
score: 108.17
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 244..341
e-value: 5.59785E-24
score: 95.0729
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 468..566
e-value: 2.1764E-27
score: 105.088
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 703..781
e-value: 3.40684E-14
score: 67.3385
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 149..229
e-value: 1.82272E-17
score: 76.5833
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 364..460
e-value: 4.69892E-9
score: 52.701
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.665
NoneNo IPR availableTMHMMTMhelixcoord: 812..834
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 674..684
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 221..231
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 458..571
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 361..464
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 559..690
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 221..372
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 680..775
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 115..238