Ubiquitin-60S ribosomal protein L40

Overview
NameUbiquitin-60S ribosomal protein L40
Smed IDSMED30007461
Length (bp)398
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ubiquitin-60S ribosomal protein L40 (SMED30007461) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ubiquitin-60S ribosomal protein L40 (SMED30007461) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30007461

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
tail regionSMED30007461SMESG000066595.1 SmedASXL_002380SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
gutSMED30007461SMESG000066595.1 SmedASXL_002380SmedAsxl_ww_GCZZ01PMID:29158443
He et al., 2017		whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30007461SMESG000066595.1 dd_Smed_v4_338_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30007461SMESG000066595.1 Contig52204newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30007461SMESG000066595.1 Contig52204uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Human
Match: UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458])

HSP 1 Score: 70.4774 bits (171), Expect = 4.793e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Human
Match: UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458])

HSP 1 Score: 70.4774 bits (171), Expect = 4.793e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Human
Match: UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458])

HSP 1 Score: 70.4774 bits (171), Expect = 4.793e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Human
Match: UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458])

HSP 1 Score: 70.4774 bits (171), Expect = 4.793e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Human
Match: UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458])

HSP 1 Score: 70.4774 bits (171), Expect = 4.793e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Celegans
Match: ubq-2 (Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632])

HSP 1 Score: 70.8626 bits (172), Expect = 1.190e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 65.0846 bits (157), Expect = 4.013e-13
Identity = 28/76 (36.84%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++ GK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456

HSP 7 Score: 45.4394 bits (106), Expect = 2.737e-6
Identity = 18/48 (37.50%), Postives = 33/48 (68.75%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNV 280
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F  V
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGV 504
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 5.622e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 65.0846 bits (157), Expect = 4.013e-13
Identity = 28/76 (36.84%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++ GK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456

HSP 7 Score: 45.4394 bits (106), Expect = 2.737e-6
Identity = 18/48 (37.50%), Postives = 33/48 (68.75%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNV 280
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F  V
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGV 504
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532

HSP 7 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608

HSP 8 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684

HSP 9 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760

HSP 10 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836

HSP 11 Score: 65.0846 bits (157), Expect = 4.717e-13
Identity = 28/76 (36.84%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++ GK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532

HSP 7 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608

HSP 8 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684

HSP 9 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760

HSP 10 Score: 67.3958 bits (163), Expect = 6.610e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836

HSP 11 Score: 65.0846 bits (157), Expect = 4.717e-13
Identity = 28/76 (36.84%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++ GK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0334787)

HSP 1 Score: 72.0182 bits (175), Expect = 6.663e-17
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRIL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0077470)

HSP 1 Score: 72.0182 bits (175), Expect = 6.663e-17
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRIL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Fly
Match: RpS27A (gene:FBgn0003942 transcript:FBtr0080016)

HSP 1 Score: 67.3958 bits (163), Expect = 6.499e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0345892)

HSP 1 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456

HSP 7 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0070933)

HSP 1 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456

HSP 7 Score: 67.3958 bits (163), Expect = 7.774e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Zebrafish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7])

HSP 1 Score: 70.4774 bits (171), Expect = 2.798e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 67.781 bits (164), Expect = 1.489e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018])

HSP 1 Score: 67.781 bits (164), Expect = 6.612e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018])

HSP 1 Score: 67.781 bits (164), Expect = 6.612e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018])

HSP 1 Score: 67.781 bits (164), Expect = 6.612e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 70.4774 bits (171), Expect = 4.345e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 67.781 bits (164), Expect = 1.026e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Xenopus
Match: ENSXETT00000033679.1 (ubiquitin C [Source:NCBI gene;Acc:448120])

HSP 1 Score: 67.3958 bits (163), Expect = 4.884e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 4.884e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 4.884e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 65.855 bits (159), Expect = 5.376e-13
Identity = 30/80 (37.50%), Postives = 57/80 (71.25%), Query Frame = 2 
Query:  125 SKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            S+ ++ + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ +SL++Y I+ ES ++L L+L GG
Sbjct:  421 SQSIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLRLRGG 500

HSP 2 Score: 63.929 bits (154), Expect = 2.296e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 63.929 bits (154), Expect = 2.296e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 4 Score: 63.929 bits (154), Expect = 2.296e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 5 Score: 63.929 bits (154), Expect = 2.296e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 6 Score: 63.929 bits (154), Expect = 2.296e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 7 Score: 60.8474 bits (146), Expect = 2.530e-11
Identity = 27/76 (35.53%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++L +Y I+ ES ++L L+L GG
Sbjct:  577 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGG 652

HSP 8 Score: 60.4622 bits (145), Expect = 3.448e-11
Identity = 27/76 (35.53%), Postives = 52/76 (68.42%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K K +D++GIP DQ  L F   +L++ ++L +Y I+ ES ++L L+L GG
Sbjct:  501 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGG 576
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 65.0846 bits (157), Expect = 8.445e-13
Identity = 30/80 (37.50%), Postives = 57/80 (71.25%), Query Frame = 2 
Query:  125 SKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            S+ ++ + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ +SL++Y I+ ES ++L L+L GG
Sbjct:  432 SQSIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLRLRGG 511

HSP 2 Score: 63.5438 bits (153), Expect = 3.503e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 87

HSP 3 Score: 63.5438 bits (153), Expect = 3.503e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   88 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 163

HSP 4 Score: 63.5438 bits (153), Expect = 3.503e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  164 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 239

HSP 5 Score: 63.5438 bits (153), Expect = 3.503e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  240 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 315

HSP 6 Score: 63.5438 bits (153), Expect = 3.503e-12
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  316 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 391

HSP 7 Score: 60.4622 bits (145), Expect = 3.749e-11
Identity = 27/76 (35.53%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++L +Y I+ ES ++L L+L GG
Sbjct:  588 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGG 663

HSP 8 Score: 60.4622 bits (145), Expect = 3.749e-11
Identity = 27/76 (35.53%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++L +Y I+ ES ++L L+L GG
Sbjct:  664 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGG 739

HSP 9 Score: 60.077 bits (144), Expect = 5.060e-11
Identity = 27/76 (35.53%), Postives = 52/76 (68.42%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K K +D++GIP DQ  L F   +L++ ++L +Y I+ ES ++L L+L GG
Sbjct:  512 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGG 587
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Mouse
Match: Gm11808 (predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356])

HSP 1 Score: 70.4774 bits (171), Expect = 3.291e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 70.4774 bits (171), Expect = 3.291e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 70.4774 bits (171), Expect = 3.291e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 70.4774 bits (171), Expect = 3.291e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. UniProt/SwissProt
Match: sp|P18101|RL40_DROME (Ubiquitin-60S ribosomal protein L40 OS=Drosophila melanogaster OX=7227 GN=RpL40 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 6.679e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRIL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. UniProt/SwissProt
Match: sp|P49632|RL40_CAEEL (Ubiquitin-60S ribosomal protein L40 OS=Caenorhabditis elegans OX=6239 GN=ubq-2 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.513e-15
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. UniProt/SwissProt
Match: sp|P0C276|RL40_SHEEP (Ubiquitin-60S ribosomal protein L40 OS=Ovis aries OX=9940 GN=UBA52 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.302e-15
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. UniProt/SwissProt
Match: sp|P62986|RL40_RAT (Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus OX=10116 GN=Uba52 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.302e-15
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. UniProt/SwissProt
Match: sp|P0C275|RL40_PONPY (Ubiquitin-60S ribosomal protein L40 OS=Pongo pygmaeus OX=9600 GN=UBA52 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.302e-15
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. TrEMBL
Match: A0A368FG96 (Ribosomal L40e family protein (Fragment) OS=Ancylostoma caninum OX=29170 GN=ANCCAN_25049 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.550e-14
Identity = 45/137 (32.85%), Postives = 80/137 (58.39%), Query Frame = 2 
Query:   32 FSHPNNKMCRL----LIILCISLFASLEASYDDPYSK------------RLI-NVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            F HP++++ R+    + I  I +F S   SY   + +            RL+  + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    6 FEHPHSRLTRIHLSVIFIAVIDIF-SCAWSYSSSFRRNIDRSCKFRNELRLVMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 141
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. TrEMBL
Match: W9X195 (Large subunit ribosomal protein L40e OS=Cladophialophora yegresii CBS 114405 OX=1182544 GN=A1O7_00595 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.757e-14
Identity = 36/96 (37.50%), Postives = 66/96 (68.75%), Query Frame = 2 
Query:  104 ASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            AS+ DP+   L+ + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS++ L
Sbjct:   48 ASHTDPH---LVQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKAL 140
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. TrEMBL
Match: D3UA40 (Putative ubiquitin (Fragment) OS=Hydroides elegans OX=216498 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.989e-14
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRML 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. TrEMBL
Match: K4G4C1 (Ribosomal protein L40-like isoform 1 OS=Callorhinchus milii OX=7868 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.390e-14
Identity = 33/87 (37.93%), Postives = 60/87 (68.97%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFLII 397
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L +
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGMDPSLRLLAM 87
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. TrEMBL
Match: K4GHU6 (Ubiquitin/ribosomal L40 fusion protein OS=Callorhinchus milii OX=7868 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.529e-14
Identity = 33/87 (37.93%), Postives = 60/87 (68.97%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFLII 397
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L +
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGMDPSLRLLAM 87
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 70.4774 bits (171), Expect = 2.371e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 70.4774 bits (171), Expect = 2.371e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Cavefish
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:103044043])

HSP 1 Score: 67.781 bits (164), Expect = 5.604e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Cavefish
Match: si:ch211-202a12.4 (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 67.781 bits (164), Expect = 6.196e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   84 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 159

HSP 2 Score: 67.781 bits (164), Expect = 6.196e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 235

HSP 3 Score: 65.855 bits (159), Expect = 2.706e-13
Identity = 28/69 (40.58%), Postives = 50/69 (72.46%), Query Frame = 2 
Query:  158 VTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            +TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  319 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 387

HSP 4 Score: 55.8398 bits (133), Expect = 9.251e-10
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 2 
Query:  197 DQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   28 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 83
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Cavefish
Match: nedd8l (NEDD8-like [Source:NCBI gene;Acc:103044361])

HSP 1 Score: 53.5286 bits (127), Expect = 3.217e-10
Identity = 24/74 (32.43%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:  143 VNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + V ++TGK ++I I+  D+V  +K + E+++GIP  Q  L ++  ++++ ++ S+Y+I+  S ++L L L GG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTASDYKIQGGSVLHLVLALRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Sea Lamprey
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 67.781 bits (164), Expect = 1.060e-14
Identity = 29/77 (37.66%), Postives = 55/77 (71.43%), Query Frame = 2 
Query:  134 LINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            ++ + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   13 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 89

HSP 2 Score: 67.3958 bits (163), Expect = 1.724e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   90 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 165

HSP 3 Score: 67.3958 bits (163), Expect = 1.724e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  166 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 241

HSP 4 Score: 67.3958 bits (163), Expect = 1.724e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  242 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 317

HSP 5 Score: 67.3958 bits (163), Expect = 1.724e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  318 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 393
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Sea Lamprey
Match: zfand4 (zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZDB-GENE-090312-102])

HSP 1 Score: 50.0618 bits (118), Expect = 2.018e-8
Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2 
Query:  107 SYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            SY  P+ + +  V + ++TG   +I++  ++ V ++KAK +  +GIPI Q  L + N++L++   L +Y I +   + L L + GG
Sbjct:   19 SYSFPFYETM-EVLIETLTGTFFEIRVSPFESVMSVKAKIQRLEGIPITQQHLIWRNIELEDDYCLHDYHITHGCTIKLVLAMRGG 103
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Yeast
Match: RPL40B (Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802])

HSP 1 Score: 68.1662 bits (165), Expect = 3.166e-16
Identity = 31/85 (36.47%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS++ L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKAL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Yeast
Match: RPL40A (Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410])

HSP 1 Score: 68.1662 bits (165), Expect = 3.166e-16
Identity = 31/85 (36.47%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS++ L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKAL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Yeast
Match: UBI4 (Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003962])

HSP 1 Score: 65.0846 bits (157), Expect = 6.599e-14
Identity = 28/76 (36.84%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 65.0846 bits (157), Expect = 6.599e-14
Identity = 28/76 (36.84%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 65.0846 bits (157), Expect = 6.599e-14
Identity = 28/76 (36.84%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 65.0846 bits (157), Expect = 6.599e-14
Identity = 28/76 (36.84%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 65.0846 bits (157), Expect = 6.599e-14
Identity = 28/76 (36.84%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Yeast
Match: RPS31 (Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog [Source:SGD;Acc:S000004157])

HSP 1 Score: 57.7658 bits (138), Expect = 4.401e-12
Identity = 24/69 (34.78%), Postives = 49/69 (71.01%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYL 343
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Yeast
Match: RUB1 (Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme) [Source:SGD;Acc:S000002546])

HSP 1 Score: 48.9062 bits (115), Expect = 2.076e-9
Identity = 22/74 (29.73%), Postives = 45/74 (60.81%), Query Frame = 2 
Query:  143 VNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            V V ++TGK + +++ + D VY++K   E+++GIP  Q  L F   ++D++ ++++  +     ++L L L GG
Sbjct:    3 VKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25])

HSP 1 Score: 67.3958 bits (163), Expect = 2.697e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Nematostella
Match: EDO45561 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSG9])

HSP 1 Score: 67.0106 bits (162), Expect = 3.386e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Nematostella
Match: EDO32403 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV54])

HSP 1 Score: 67.3958 bits (163), Expect = 1.061e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 1.061e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 65.855 bits (159), Expect = 3.635e-14
Identity = 28/76 (36.84%), Postives = 53/76 (69.74%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ    F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Nematostella
Match: EDO32547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUP6])

HSP 1 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456

HSP 7 Score: 67.3958 bits (163), Expect = 3.384e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Nematostella
Match: EDO31255 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYF9])

HSP 1 Score: 53.5286 bits (127), Expect = 1.082e-10
Identity = 22/62 (35.48%), Postives = 44/62 (70.97%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIE 322
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Medaka
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:101169681])

HSP 1 Score: 70.8626 bits (172), Expect = 2.233e-16
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   PS+R L
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 67.781 bits (164), Expect = 5.689e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 68.1662 bits (165), Expect = 5.889e-15
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Medaka
Match: ubb (ubiquitin C [Source:NCBI gene;Acc:101172100])

HSP 1 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152

HSP 3 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

HSP 4 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304

HSP 5 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

HSP 6 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456

HSP 7 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  554 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 629

HSP 8 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  630 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 705

HSP 9 Score: 67.3958 bits (163), Expect = 1.016e-13
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:  706 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 781

HSP 10 Score: 64.6994 bits (156), Expect = 7.687e-13
Identity = 28/75 (37.33%), Postives = 53/75 (70.67%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG 361
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L G
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 531
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Medaka
Match: ENSORLT00000015052.2 (pep primary_assembly:ASM223467v1:12:2267197:2268484:1 gene:ENSORLG00000012019.2 transcript:ENSORLT00000015052.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 63.1586 bits (152), Expect = 1.655e-13
Identity = 27/75 (36.00%), Postives = 52/75 (69.33%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG 361
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+  G
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLQTPG 75
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Planmine SMEST
Match: SMESG000066595.1 (SMESG000066595.1)

HSP 1 Score: 218.394 bits (555), Expect = 1.870e-73
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 2 
Query:   38 HPNNKMCRLLIILCISLFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG 361
            HPNNKMCRLLIILCI LFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG
Sbjct:   91 HPNNKMCRLLIILCIYLFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG 198
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Planmine SMEST
Match: SMESG000066595.1 (SMESG000066595.1)

HSP 1 Score: 221.476 bits (563), Expect = 1.590e-71
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 2 
Query:   38 HPNNKMCRLLIILCISLFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG 361
            HPNNKMCRLLIILCI LFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG
Sbjct:   91 HPNNKMCRLLIILCIYLFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLG 198
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Planmine SMEST
Match: SMESG000066693.1 (SMESG000066693.1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.195e-16
Identity = 32/85 (37.65%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   P++R L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPTLRVL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Planmine SMEST
Match: SMESG000035681.1 (SMESG000035681.1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.887e-16
Identity = 31/85 (36.47%), Postives = 59/85 (69.41%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG*GFPSIRFL 391
            + + V ++TGK++ ++++  D + N+K+K +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG   P++R L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDSIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPTLRVL 85
[Close]
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Planmine SMEST
Match: SMESG000025683.1 (SMESG000025683.1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.075e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 66.6254 bits (161), Expect = 1.075e-14
Identity = 29/76 (38.16%), Postives = 54/76 (71.05%), Query Frame = 2 
Query:  137 INVNVVSVTGKSVKIQIDKYDQVYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLKLLGG 364
            + + V ++TGK++ ++++  D + N+KAK +D++GIP DQ  L F   +L++ ++LS+Y I+ ES ++L L+L GG
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
The following BLAST results are available for this feature:
BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
UBA524.793e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
UBA524.793e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
UBA524.793e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
UBA524.793e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
UBA524.793e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ubq-21.190e-1638.82Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ... [more]
ubq-15.622e-1438.16Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
ubq-15.622e-1438.16Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
ubq-16.610e-1438.16Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
ubq-16.610e-1438.16Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RpL406.663e-1738.82gene:FBgn0003941 transcript:FBtr0334787[more]
RpL406.663e-1738.82gene:FBgn0003941 transcript:FBtr0077470[more]
RpS27A6.499e-1538.16gene:FBgn0003942 transcript:FBtr0080016[more]
Ubi-p5E7.774e-1438.16gene:FBgn0086558 transcript:FBtr0345892[more]
Ubi-p5E7.774e-1438.16gene:FBgn0086558 transcript:FBtr0070933[more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba522.798e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
ubb1.489e-1538.16ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10][more]
rps27a6.612e-1538.16ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0... [more]
rps27a6.612e-1538.16ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0... [more]
rps27a6.612e-1538.16ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba524.345e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
rps27a1.026e-1438.16ribosomal protein S27a [Source:NCBI gene;Acc:54892... [more]
ENSXETT00000033679.14.884e-1438.16ubiquitin C [Source:NCBI gene;Acc:448120][more]
pdcd115.376e-1337.50programmed cell death 11 [Source:Xenbase;Acc:XB-GE... [more]
pdcd118.445e-1337.50programmed cell death 11 [Source:Xenbase;Acc:XB-GE... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Uba521.363e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
Gm118083.291e-1638.82predicted gene 11808 [Source:MGI Symbol;Acc:MGI:36... [more]
Uba523.291e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
Uba523.291e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
Uba523.291e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P18101|RL40_DROME6.679e-1638.82Ubiquitin-60S ribosomal protein L40 OS=Drosophila ... [more]
sp|P49632|RL40_CAEEL1.513e-1538.82Ubiquitin-60S ribosomal protein L40 OS=Caenorhabdi... [more]
sp|P0C276|RL40_SHEEP2.302e-1538.82Ubiquitin-60S ribosomal protein L40 OS=Ovis aries ... [more]
sp|P62986|RL40_RAT2.302e-1538.82Ubiquitin-60S ribosomal protein L40 OS=Rattus norv... [more]
sp|P0C275|RL40_PONPY2.302e-1538.82Ubiquitin-60S ribosomal protein L40 OS=Pongo pygma... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A368FG961.550e-1432.85Ribosomal L40e family protein (Fragment) OS=Ancylo... [more]
W9X1952.757e-1437.50Large subunit ribosomal protein L40e OS=Cladophial... [more]
D3UA405.989e-1438.82Putative ubiquitin (Fragment) OS=Hydroides elegans... [more]
K4G4C16.390e-1437.93Ribosomal protein L40-like isoform 1 OS=Callorhinc... [more]
K4GHU66.529e-1437.93Ubiquitin/ribosomal L40 fusion protein OS=Callorhi... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba522.371e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
uba522.371e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
rps27a5.604e-1538.16ribosomal protein S27a [Source:NCBI gene;Acc:10304... [more]
si:ch211-202a12.46.196e-1438.16ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463][more]
nedd8l3.217e-1032.43NEDD8-like [Source:NCBI gene;Acc:103044361][more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
UBB1.060e-1437.66ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463][more]
zfand42.018e-830.23zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZD... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5
Match NameE-valueIdentityDescription
RPL40B3.166e-1636.47Ubiquitin-ribosomal 60S subunit protein L40B fusio... [more]
RPL40A3.166e-1636.47Ubiquitin-ribosomal 60S subunit protein L40A fusio... [more]
UBI46.599e-1436.84Ubiquitin; becomes conjugated to proteins, marking... [more]
RPS314.401e-1234.78Fusion protein cleaved to yield ribosomal protein ... [more]
RUB12.076e-929.73Ubiquitin-like protein with similarity to mammalia... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO485032.697e-1538.16Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO455613.386e-1538.16Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO324031.061e-1438.16Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO325473.384e-1438.16Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO312551.082e-1035.48Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
uba522.233e-1638.82ubiquitin A-52 residue ribosomal protein fusion pr... [more]
rps27a5.689e-1538.16ribosomal protein S27a [Source:NCBI gene;Acc:10116... [more]
rps27a5.889e-1538.16ribosomal protein S27a [Source:NCBI gene;Acc:10116... [more]
ubb1.016e-1338.16ubiquitin C [Source:NCBI gene;Acc:101172100][more]
ENSORLT00000015052.21.655e-1336.00pep primary_assembly:ASM223467v1:12:2267197:226848... [more]
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BLAST of Ubiquitin-60S ribosomal protein L40 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000066595.11.870e-7399.07SMESG000066595.1[more]
SMESG000066595.11.590e-7199.07SMESG000066595.1[more]
SMESG000066693.11.195e-1637.65SMESG000066693.1[more]
SMESG000035681.14.887e-1636.47SMESG000035681.1[more]
SMESG000025683.11.075e-1438.16SMESG000025683.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30007461 ID=SMED30007461|Name=Ubiquitin-60S ribosomal protein L40|organism=Schmidtea mediterranea sexual|type=transcript|length=398bp
TGCTTAATCAATATATATATATTCCAATTGATTCAGTCATCCTAATAATA
AAATGTGCAGATTATTGATTATTTTGTGCATATCTCTATTTGCTTCATTG
GAAGCCTCCTATGACGATCCGTATTCAAAAAGGTTGATCAATGTGAATGT
GGTCTCGGTCACCGGTAAAAGTGTAAAAATTCAGATCGACAAGTACGATC
AGGTTTACAACTTAAAAGCCAAATATGAAGATCGGCAAGGAATACCAATT
GATCAAATGGAATTGTCTTTTAACAACGTCAAGCTGGATAACCGTCAAAG
CCTGTCTAATTATCAAATTGAAAACGAATCAAACGTTTATCTTCGATTAA
AACTTCTAGGTGGTTAAGGGTTTCCTTCAATTCGATTTTTAATAATTT
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protein sequence of SMED30007461-orf-1

>SMED30007461-orf-1 ID=SMED30007461-orf-1|Name=SMED30007461-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=105bp
MCRLLIILCISLFASLEASYDDPYSKRLINVNVVSVTGKSVKIQIDKYDQ
VYNLKAKYEDRQGIPIDQMELSFNNVKLDNRQSLSNYQIENESNVYLRLK
LLGG*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005654nucleoplasm
GO:0005783endoplasmic reticulum
GO:0005886plasma membrane
GO:0045202synapse
GO:0005634nucleus
GO:0005737cytoplasm
GO:0005829cytosol
GO:0005840ribosome
GO:0005875microtubule associated complex
GO:0022625cytosolic large ribosomal subunit
GO:0030529intracellular ribonucleoprotein complex
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000421tail
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin_dom
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0003735structural constituent of ribosome
GO:0031386protein tag
Vocabulary: biological process
TermDefinition
GO:0002181cytoplasmic translation
GO:0006412translation
GO:0006464cellular protein modification process
GO:0006511ubiquitin-dependent protein catabolic process
GO:0007219Notch signaling pathway
GO:0016567protein ubiquitination
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956Ubiquitin domainPRINTSPR00348UBIQUITINcoord: 60..80
score: 41.02
coord: 39..59
score: 27.44
coord: 81..102
score: 37.49
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 29..100
e-value: 1.2E-8
score: 44.7
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 32..101
e-value: 1.8E-14
score: 53.3
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 29..104
score: 18.062
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 26..104
e-value: 1.8E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 29..103
NoneNo IPR availablePANTHERPTHR10666:SF307UBIQUITIN-40S RIBOSOMAL PROTEIN S27A-RELATEDcoord: 29..103
NoneNo IPR availableCDDcd01803Ubl_ubiquitincoord: 33..104
e-value: 1.75761E-15
score: 63.2321
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.804
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 20..104